NO03G00830, NO03G00830 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G00830 vs. NCBI_GenBank
Match: CEM37137.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 178.7 bits (452), Expect = 4.600e-41 Identity = 105/282 (37.23%), Postives = 151/282 (53.55%), Query Frame = 0 Query: 135 ENLQSLLDSRIAKRISGHLWFNTAWAGAVTALFEFM--PQWHIDAYISPLPHQLMSSALGLLLVFRTNAAYDRFWEARKVWGSVTNNCRNLARTGRIALDRKYHARFSMLVISFSVTLRAHLQRVVVSTELEALLPSWEADQVRMNSCPPALIAMKLTHLINEAVGKN--EQRSDFYALYLEQLVGELINCLGMAERILLTPVPASYSRHTSRFLSLYTFTLPFVLVHELEYFTVPAIGAICWTLFSIEEIGHLIEEPFSATSKQLPLRRMTTTIARDVRSL 413 E L +L SRI RI G L F + AL P++ + PH L ALGLLLVFRTNAAY RFWE RK WG++ R LA + +K+H L+ ++ + HLQ + E+ LL E Q++ + PP + ++ ++ EA ++ + ++ + + +G+L LG ERI+ TPVP SYSRHTSRFL+LY TLPF L+ L + VP + + W SI+EIGH IE+PF + Q+P+ + TI D+ L Sbjct: 140 ECLLTLPLSRIFVRIRGQLIFQVVLTTFIAALHHLSRNPKF---LTLPSTPHSLTGGALGLLLVFRTNAAYSRFWEGRKCWGTLVTTIRELAYEFSFYMPQKFHHHVLRLLKAYPRLFKQHLQGELNLNEVGHLLTEQERTQIQTVNNPPLYLLRRMCGILYEAYEESGGTKPTERKVVAVNAKLGKLCEMLGACERIIKTPVPVSYSRHTSRFLTLYCATLPFALLESLRWAVVPVVAVMTWGFLSIQEIGHFIEDPFDRIACQIPMEGLCETIEADITDL 418
BLAST of NO03G00830 vs. NCBI_GenBank
Match: WP_096830869.1 (hypothetical protein [Tychonema bourrellyi] >PHX54693.1 hypothetical protein CP500_014790 [Tychonema bourrellyi FEM_GT703]) HSP 1 Score: 172.2 bits (435), Expect = 4.300e-39 Identity = 96/233 (41.20%), Postives = 140/233 (60.09%), Query Frame = 0 Query: 188 SSALGLLLVFRTNAAYDRFWEARKVWGSVTNNCRNLARTGRIALDRKYHARF------SMLVISFSVTLRAHLQRVVVSTELEALLPSWEADQVRMNSCPPALIAMKLTHLINEAVGKNEQRSDFYAL-YLEQLVGELINCLGMAERILLTPVPASYSRHTSRFLSLYTFTLPFVLVHELEYFTVPAIGAICWTLFSIEEIGHLIEEPFSATSKQLPLRRMTTTIARDVRSLL 414 S LGLLLVFRTN AY+RFWE RK WG V NN RNLAR +A+D K F L+++F+V ++ HL++ V++ELE+L+ + ++++ + PP +A + +N +N D Y L + QL+ LI+CLG ERIL TP+P +Y+ H + L LY+ LPF +V +L + T P + I +TLF IEEIG IE PF + LPL + T+ R++ L+ Sbjct: 58 SIVLGLLLVFRTNTAYERFWEGRKFWGGVVNNVRNLARQIWVAIDEKDQDDFIAKKSALRLLVAFAVAMKLHLRQESVNSELESLISPSQYEKLKSMNNPPIEVAFWIGDYLNTQYDRN--CVDVYQLTAMNQLLNSLIDCLGGCERILRTPIPLAYAIHLKQLLLLYSLALPFQMVKDLSWGTGPVVALISFTLFGIEEIGLEIENPFGHDTNDLPLDNICATMHRNIEDLI 288
BLAST of NO03G00830 vs. NCBI_GenBank
Match: XP_005833734.1 (hypothetical protein GUITHDRAFT_107530 [Guillardia theta CCMP2712] >EKX46754.1 hypothetical protein GUITHDRAFT_107530 [Guillardia theta CCMP2712]) HSP 1 Score: 165.6 bits (418), Expect = 4.000e-37 Identity = 113/307 (36.81%), Postives = 157/307 (51.14%), Query Frame = 0 Query: 127 RYQSSDWVENLQSLLDSRIAKRISGHLWFNTAWAGAVTALFEFMPQWH-IDAYISPLPHQLMSSALGLLLVFRTNAAYDRF----WEARKVWGSVTNNCRNLART--GRI-ALDRKYHARFSMLVISFSVTLRAHLQRV-----------VVSTELEALLPSWEADQVRMNSCPPALIAMKLTHLIN------EAVGK-------NEQRSDFYAL-----------YLEQLVGELINCLGMAERILLTPVPASYSRHTSRFLSLYTFTLPFVLVHELEYFTVPAIGAICWTLFSIEEIGHLIEEPFS 391 RY S DW+ NL S+ S + R+S HL+ NT +A A+ + MP + A S +PH L ALGLLLVFRTN AY+RF EARK+WGS+ N R R G LDR++ L+ F L HLQ + T ++ LL + + + P I + +I EA K E + F ++ + E+ + E N +G ERI+ + VP SYSRHTSRFLS++ FTLP VLVH L++ +P + +CW LF IEE+GH+IE+PF+ Sbjct: 70 RYASEDWLYNLLSIFSSAMFWRVSSHLFANTLFAVAIWCAYLLMPSLQAVCAGFSTVPHSLTGGALGLLLVFRTNTAYERFLDVKHEARKLWGSMVNRIREFTRVIHGNFRGLDREH---LLSLLACFPSILLQHLQSLEPVYRPTLFSDKQLTAMKGLLGDSDLKLLWASRNRPFTIIKMMGAIIQKFYTDVEAQSKKFGGGQRGENFTQFESMVVQAALISERSHAEECLTEFSNVMGACERIVKSSVPTSYSRHTSRFLSIWCFTLPLVLVHSLQWRMIPCVFIMCWMLFVIEEVGHVIEDPFN 373
BLAST of NO03G00830 vs. NCBI_GenBank
Match: SIO30001.1 (putative membrane protein [Singulisphaera sp. GP187]) HSP 1 Score: 165.2 bits (417), Expect = 5.300e-37 Identity = 110/294 (37.41%), Postives = 150/294 (51.02%), Query Frame = 0 Query: 128 YQSSDWVENLQSLLDSRIAKRISGHLWFNTAWAGAVTALFEFMPQWHIDAYISPLPHQLMSSALGLLLVFRTNAAYDRFWEARKVWGSVTNNCRNLARTGR--IALDRKYHARFSMLVISFSVTLRAHLQRVVVSTELEALLPSWEADQVRMNSCPPALIAMKLTHLINEAVGKNEQRSDFYALYLEQLVGELINCLGMAERILLTPVPASYSRHTSRFLSLYTFTLPFVLVHELEYFTVPAIGAICWTLFSIEEIGHLIEEPFSATSKQLPLRRMTTTIARDVRSLLQTKDGM 420 Y +W +L +L S + + ISG + WA AV A+ + I P H L+ ALGLLLVFRTNA+YDR+WE R+ WGS+ N RNL R R ++ DR + I+FS L+ + LP+ E + V + P IA++++ + A + SD+ + L+Q V LI+ G ERI TP+P Y H R L LY FTLPF LV ++ +PA + +T F IEEIG IE PF LPL R TI RD LL+ DG+ Sbjct: 11 YHKREWTHSLFTLRGSMV-REISGRVSACATWAVAVVAVHHLIR----SMAIQPTIHMLVGVALGLLLVFRTNASYDRYWEGRRQWGSIINETRNLGRAARTFLSRDRALLEEMMLWTIAFSQAAMNSLRGSSGLGAIAQRLPAAEVEAVLRSGNLPLAIAVQISERLVRARDRG-IISDYVTISLDQNVQLLIDYFGACERIHKTPLPFVYVVHLRRSLVLYCFTLPFALVDPYGWWAIPASLLVAYTYFGIEEIGVEIENPFGLDDNDLPLERFCETIERD---LLELCDGL 295
BLAST of NO03G00830 vs. NCBI_GenBank
Match: WP_074308310.1 (hypothetical protein [Singulisphaera sp. GP187]) HSP 1 Score: 165.2 bits (417), Expect = 5.300e-37 Identity = 110/294 (37.41%), Postives = 150/294 (51.02%), Query Frame = 0 Query: 128 YQSSDWVENLQSLLDSRIAKRISGHLWFNTAWAGAVTALFEFMPQWHIDAYISPLPHQLMSSALGLLLVFRTNAAYDRFWEARKVWGSVTNNCRNLARTGR--IALDRKYHARFSMLVISFSVTLRAHLQRVVVSTELEALLPSWEADQVRMNSCPPALIAMKLTHLINEAVGKNEQRSDFYALYLEQLVGELINCLGMAERILLTPVPASYSRHTSRFLSLYTFTLPFVLVHELEYFTVPAIGAICWTLFSIEEIGHLIEEPFSATSKQLPLRRMTTTIARDVRSLLQTKDGM 420 Y +W +L +L S + + ISG + WA AV A+ + I P H L+ ALGLLLVFRTNA+YDR+WE R+ WGS+ N RNL R R ++ DR + I+FS L+ + LP+ E + V + P IA++++ + A + SD+ + L+Q V LI+ G ERI TP+P Y H R L LY FTLPF LV ++ +PA + +T F IEEIG IE PF LPL R TI RD LL+ DG+ Sbjct: 4 YHKREWTHSLFTLRGSMV-REISGRVSACATWAVAVVAVHHLIR----SMAIQPTIHMLVGVALGLLLVFRTNASYDRYWEGRRQWGSIINETRNLGRAARTFLSRDRALLEEMMLWTIAFSQAAMNSLRGSSGLGAIAQRLPAAEVEAVLRSGNLPLAIAVQISERLVRARDRG-IISDYVTISLDQNVQLLIDYFGACERIHKTPLPFVYVVHLRRSLVLYCFTLPFALVDPYGWWAIPASLLVAYTYFGIEEIGVEIENPFGLDDNDLPLERFCETIERD---LLELCDGL 288
BLAST of NO03G00830 vs. NCBI_GenBank
Match: WP_006528900.1 (putative membrane protein [Gloeocapsa sp. PCC 73106] >ELR98246.1 putative membrane protein [Gloeocapsa sp. PCC 73106]) HSP 1 Score: 164.9 bits (416), Expect = 6.900e-37 Identity = 101/289 (34.95%), Postives = 163/289 (56.40%), Query Frame = 0 Query: 132 DWVENLQSLLDSRIAKRISGHLWFNTAWAGAVTALFEF-MPQWHIDAYISPLPHQLMSSALGLLLVFRTNAAYDRFWEARKVWGSVTNNCRNLARTGRIAL------DRKYHARFSMLVISFSVTLRAHLQRVVVSTELEALLPSWEADQVRMNSCPPALIAMKLTHLINEAVGKNEQRSDFYALYLEQLVGELINCLGMAERILLTPVPASYSRHTSRFLSLYTFTLPFVLVHELEYFTVPAIGAICWTLFSIEEIGHLIEEPFSATSKQLPLRRMTTTIARDVRSLL 414 +W + L +L S + I + F +A ++A++ F Q +D S +P S LGLLLVFRTN AYDRFWE RK+WG++ N RNLAR + + DR + L+++F++ + HL+ V+ EL L+P +++ + PP IA L + + +N++ S + + +++L+ L++CLG ERI+ TP+P +YS H + L +Y +LPF +V EL +FT P + I +T+F IEEIG IE PF + LPL ++ T+ ++ L+ Sbjct: 23 NWFKLLLTLKGS-VIPAILPRVIFCGLFAWVISAIYYFGYKQVSLDILSSLVP----SIVLGLLLVFRTNTAYDRFWEGRKLWGTLVNTVRNLARGIWVCITETKPEDRIQKIKALRLLVAFAIATKLHLRSEEVNQELADLMPDSWFQRLKTMNHPPLEIAFWLADYLQKQ-SENDKLSAYQLVAMQKLINILVDCLGGCERIIRTPLPMAYSIHLRQLLLIYCLSLPFQVVEELVWFTGPFVALISFTVFGIEEIGIEIENPFGYDANDLPLDQICHTMQVNIEDLI 305
BLAST of NO03G00830 vs. NCBI_GenBank
Match: CBJ26187.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 164.5 bits (415), Expect = 9.000e-37 Identity = 112/303 (36.96%), Postives = 155/303 (51.16%), Query Frame = 0 Query: 119 TFLLDPPQRYQSSDWVENLQSLLDSRIAKRISGHLWFNTAWAGAVTALFEFMPQWHIDAYISPLPHQLMSSALGLLLVFRTNAAYDRFWEARKVWGSVTNNCRNLARTGRIALD---RKYHARFSMLVISFSVTLRAHLQRVVVSTELEALL-PSWEADQVRMNSCPPALIAMKLTHLINEAVGKNEQRSDFYALYLEQLVGELINCLGMAERILLTPVPASYSRHTSRFLSLYTFTLPFVLVHELEYFTVPAIGAICWTLFSIEEIGHLIEEPFSATSKQLPLRRMTTTIARDVRSLLQTKD 418 T + +RY SS W NL++L S I RI L T WA AV+ + + H +S PH L+ SALGLLLVFRTNAAY RF E RK+W V N R++AR + D R+ R + L+ +V L+ HLQ + E LL P D + N P + ++ I + E S L + + +L + +G ER++ TPVP Y RHTSRFL+++ F LP V+V E+ T P + W LF I+EIG LIE+PF + L L M ++ DV + D Sbjct: 123 TLTIPQAERYSSSAWWHNLRTLPTSVILHRIKHPLLVQTFWATAVSLVHAGLGGVH---SMSIKPHTLLGSALGLLLVFRTNAAYQRFQEGRKLWEEVLNVSRDIARMSTLYEDVFGRRLVQRIANLLACHAVILQEHLQGYKLPRVWEDLLRPEEVRDLMTTNCNRPLKVVNMISREIKSVPYRCEDWSSRERLAILSMCNKLGSTIGGCERLVQTPVPLHYVRHTSRFLTIWCFLLPLVIVGEMGMATAPVVFLATWALFGIQEIGLLIEDPFQSA---LSLDIMCNSVYTDVMQTVGVAD 419
BLAST of NO03G00830 vs. NCBI_GenBank
Match: WP_015250459.1 (membrane protein [Singulisphaera acidiphila] >AGA31390.1 putative membrane protein [Singulisphaera acidiphila DSM 18658]) HSP 1 Score: 164.1 bits (414), Expect = 1.200e-36 Identity = 106/294 (36.05%), Postives = 151/294 (51.36%), Query Frame = 0 Query: 128 YQSSDWVENLQSLLDSRIAKRISGHLWFNTAWAGAVTALFEFMPQWHIDAYISPLPHQLMSSALGLLLVFRTNAAYDRFWEARKVWGSVTNNCRNLARTGRIAL--DRKYHARFSMLVISFSVTLRAHLQRVVVSTELEALLPSWEADQVRMNSCPPALIAMKLTHLINEAVGKNEQRSDFYALYLEQLVGELINCLGMAERILLTPVPASYSRHTSRFLSLYTFTLPFVLVHELEYFTVPAIGAICWTLFSIEEIGHLIEEPFSATSKQLPLRRMTTTIARDVRSLLQTKDGM 420 Y +W +L S+ + + ISG + WA AV A+ + I P H L+ ALGLLLVFRTNA+YDR+WE R+ WGS+ N RNL R R+ L DR+ + I+F L+ + LP+ E + V + P +A++++ + A + SD+ + L+Q V L++ G ERI TP+P Y H R L LY FTLPF LV+ ++ +PA + +T F IEEIG IE PF + LPL R TI RD L++ DG+ Sbjct: 4 YNKREWTRSLFSVRGTMV-HEISGRVSACAVWAVAVVAVHHLIRSME----ILPTTHMLVGVALGLLLVFRTNASYDRYWEGRRQWGSIINETRNLGRASRVFLSRDRELLEEMMLWTIAFPHAAMNSLRGSSGLGAIAQRLPAAEVEAVLQSGDIPLAVAVRISECLVRARDRG-IISDYVTVSLDQNVQLLMDYFGACERIHKTPLPFVYVVHLRRALVLYCFTLPFALVNPYGWWAIPASLLVAYTFFGIEEIGVEIENPFGLDANDLPLERFCETIERD---LIELTDGL 288
BLAST of NO03G00830 vs. NCBI_GenBank
Match: WP_073592204.1 (hypothetical protein [Phormidium ambiguum] >OKH40141.1 hypothetical protein NIES2119_04250 [Phormidium ambiguum IAM M-71]) HSP 1 Score: 162.2 bits (409), Expect = 4.500e-36 Identity = 92/258 (35.66%), Postives = 145/258 (56.20%), Query Frame = 0 Query: 162 AVTALFEFMPQWHIDAYISPLPHQLMSSALGLLLVFRTNAAYDRFWEARKVWGSVTNNCRNLARTGRIALDRK------YHARFSMLVISFSVTLRAHLQRVVVSTELEALLPSWEADQVRMNSCPPALIAMKLTHLINEAVGKNEQRSDFYALYLEQLVGELINCLGMAERILLTPVPASYSRHTSRFLSLYTFTLPFVLVHELEYFTVPAIGAICWTLFSIEEIGHLIEEPFSATSKQLPLRRMTTTIARDVRSLL 414 +V F + W I A + P + LGLLLVFRTN AY+RFWE RK+WG +TN RNLAR +++D K L+++F+VT + HL+ +V+ ELE L+ + +++ + PP +A ++ + + +N S + L+ L+ +L++CLG ERIL TP+P +Y+ H + + LY +LPF +V E +FT + + +TL IEEIG IE PF + LPL + T + R++ L+ Sbjct: 38 SVMHYFGWAVSWPILASLIP------NIVLGLLLVFRTNTAYERFWEGRKIWGIITNTTRNLARQIWVSVDEKEVRDRDNKVATLKLLVAFAVTTKLHLRGELVNQELEGLITRKQYYKLKEMNNPPLQVAFWISDYLQKQYERNCLNS-YQLTALQALINDLVDCLGGCERILKTPIPLAYAIHLKQLILLYCLSLPFQMVEEFGFFTGIIVAIVSFTLLGIEEIGVEIENPFGYDANDLPLDTICTNMRRNIEDLI 288
BLAST of NO03G00830 vs. NCBI_GenBank
Match: XP_005758002.1 (hypothetical protein EMIHUDRAFT_107237 [Emiliania huxleyi CCMP1516] >EOD05573.1 hypothetical protein EMIHUDRAFT_107237 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 161.4 bits (407), Expect = 7.600e-36 Identity = 105/279 (37.63%), Postives = 136/279 (48.75%), Query Frame = 0 Query: 126 QRYQSSDWVENLQSLLDSRIAKRISGHLWFNTAWAGAVTALFEFMPQWHIDAYISPLPHQLMSSALGLLLVFRTNAAYDRFWEARKVWGSVTNNCRNLARTGRIALDRKYHA---RFSMLVISFSVTLRAHL------------QRVVVSTELEALLPSWEADQVRMNSCPPALIAMKLTHLINEAVGKNEQRSDFYALYLEQLVGELINCLGMAERILLTPVPASYSRHTSRFLSLYTFTLPFVLVHELEYFTVPAIGAICWTLFSIEEIGHLIEEPF 390 +RY S+DW+ N S+ S + +RI HLW T V L ++ S +PH L+ L LLL FRTN AY+RF+ R WG V N+C +LA + + A R LV SF L QR +S +E P AD R P H + A Q + + VG L++ LG E +L TPVP SYSRHTSRFL+++ TLP VLV L + TVPA+ + W LF IEEIGHLIE+PF Sbjct: 55 ERYTSTDWLTNFLSIPRSHVLERIGPHLWSQTGLCALVVLLHRHGLRFPTG---SAMPHTLLGGFLSLLLAFRTNMAYNRFYAGRLNWGVVKNSCSDLALYAVTHVRPRSPALAERLLALVASFPPALACRCCCDESSAKLPLSQRQALSGAMETAAPHALADVSRRGRLVP--------HASSAAAVVETQVEAEMLMQASRRVGSLVDALGSCESLLTTPVPLSYSRHTSRFLTIWCGTLPVVLVDALGWMTVPAVAFVSWCLFGIEEIGHLIEQPF 322 The following BLAST results are available for this feature:
BLAST of NO03G00830 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G00830 ID=NO03G00830|Name=NO03G00830|organism=Nannochloropsis oceanica|type=gene|length=3410bpback to top protein sequence of NO03G00830.1 >NO03G00830.1-protein ID=NO03G00830.1-protein|Name=NO03G00830.1|organism=Nannochloropsis oceanica|type=polypeptide|length=519bpback to top Synonyms
Publications
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