NO03G00650, NO03G00650 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G00650 vs. NCBI_GenBank
Match: XP_003059892.1 (predicted protein [Micromonas pusilla CCMP1545] >EEH55844.1 predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 88.2 bits (217), Expect = 2.600e-14 Identity = 62/158 (39.24%), Postives = 83/158 (52.53%), Query Frame = 0 Query: 6 STTSFYEILGV-SPSASPATIKRAYQQAALATHPDKTRPVLQPIRPIPTGMDSDSLPTYPSFLDVQAAWDTLRHPTTRDAYDQQLQRQQREEQGGGFVADEVKVDEMDEEGGEHGEGGWLVYPCRCGDGFRVRKDEVEGRAGRGIVVPCDGCSLRIRV 163 S+ + YE+LGV + AS IKRAY+ AALA+HPDK + G D+ FL VQAAW+ L+ +R AYD +L R + V+DE +D+MD EG + CRCGD + V DE+ + I VPC CSL +RV Sbjct: 3 SSRTHYEVLGVDARDASTEDIKRAYKAAALASHPDKRASRVD-------GAAGDN----SEFLKVQAAWEILKESASRAAYDARLLETARRD-ADVVVSDEFDIDDMDAEGSSPTK---FTRRCRCGDAYEVWSDELLA-SFDAIDVPCASCSLHVRV 144
BLAST of NO03G00650 vs. NCBI_GenBank
Match: KQL24813.1 (hypothetical protein SETIT_031296mg [Setaria italica]) HSP 1 Score: 87.8 bits (216), Expect = 3.400e-14 Identity = 59/171 (34.50%), Postives = 87/171 (50.88%), Query Frame = 0 Query: 9 SFYEILGVSPSASPATIKRAYQQAALATHPDKTRPVLQPIRPIPTGMDSDSLPTYPSFLDVQAAWDTLRHPTTRDAYDQQLQRQQREEQGGGFVADEVKVDEMDEEGGEHGEGGWLVYPCRCGDGFRVRK-------------DEVEGRA----GRGIVVPCDGCSLRIRV 163 + YE+L VS A+ I+ AY+ AAL THPDK L+ + + S L FL VQ AW+ LRHP +R YD+QLQ ++ + +A E+++ +M E + L+YPCRCGD F + EVE +A +V+ C CSL++R+ Sbjct: 9 TLYEVLSVSEDATYGEIRAAYKSAALNTHPDKGHTTLE------SSVPSSEL---QEFLSVQRAWEILRHPASRADYDKQLQSSRQNIE---IIASEIEIRDMIVE--STADTVELLYPCRCGDYFSITSCELGDMGILVSGDGEVEQQASDSSSASVVLGCGSCSLKVRL 165
BLAST of NO03G00650 vs. NCBI_GenBank
Match: XP_008613393.1 (hypothetical protein SDRG_09252 [Saprolegnia diclina VS20] >EQC33270.1 hypothetical protein SDRG_09252 [Saprolegnia diclina VS20]) HSP 1 Score: 87.8 bits (216), Expect = 3.400e-14 Identity = 61/156 (39.10%), Postives = 81/156 (51.92%), Query Frame = 0 Query: 9 SFYEILGVSPSASPATIKRAYQQAALATHPDKTRPVLQPIRPIPTGMDSDSLPTYPSFLDVQAAWDTLRHPTTRDAYDQQLQRQQREEQGGGFVADEVKVDEM--DEEGGEHGEGGWLVYPCRCGDGFRVRKDEVEGRAGRGIVVPCDGCSLRIRV 163 S Y++ GV+ S A IK+AY A L +HPDK + D SL F V AA+ TLR TR AYD LQ + ++ ++DEV +D+M DEE G + + CRCG+ + + DE+E VVPCDGCSL IRV Sbjct: 3 SHYDLFGVAADCSQAEIKQAYHAAILMSHPDKQK----------AAEDVSSL----DFQQVHAAYQTLRSAETRRAYDLSLQEAKLRDEKR--ISDEVDLDDMTFDEESGCY------AHACRCGEHYFISIDELEDGTD---VVPCDGCSLNIRV 133
BLAST of NO03G00650 vs. NCBI_GenBank
Match: PAN12783.1 (hypothetical protein PAHAL_B03091 [Panicum hallii] >PUZ71020.1 hypothetical protein GQ55_2G281100 [Panicum hallii var. hallii]) HSP 1 Score: 87.8 bits (216), Expect = 3.400e-14 Identity = 56/171 (32.75%), Postives = 85/171 (49.71%), Query Frame = 0 Query: 9 SFYEILGVSPSASPATIKRAYQQAALATHPDKTRPVLQPIRPIPTGMDSDSLPTYPSFLDVQAAWDTLRHPTTRDAYDQQLQRQQREEQGGGFVADEVKVDEMDEEGGEHGEGGWLVYPCRCGDGFRVR-----------------KDEVEGRAGRGIVVPCDGCSLRIRV 163 + YE+L VS A+ I+ AY+ AAL THPDK L+ +P+ + FL VQ AW+ LRHP +R YD+QLQ ++ + +A E++V +M E + L+YPCRCGD F + + + A +V+ C CSL++R+ Sbjct: 12 TLYEVLSVSEDATYDEIRAAYKSAALNTHPDKAHTTLE--SSVPSSEQQE-------FLSVQKAWEILRHPASRADYDKQLQSSRQNIE---IIASEIEVRDMIIE--STADTVELLYPCRCGDYFSITSCELGEMGISVSGDGEVEQQASDSASASVVLGCGSCSLKVRL 168
BLAST of NO03G00650 vs. NCBI_GenBank
Match: XP_004957032.2 (uncharacterized protein LOC101767660 [Setaria italica]) HSP 1 Score: 87.8 bits (216), Expect = 3.400e-14 Identity = 59/171 (34.50%), Postives = 87/171 (50.88%), Query Frame = 0 Query: 9 SFYEILGVSPSASPATIKRAYQQAALATHPDKTRPVLQPIRPIPTGMDSDSLPTYPSFLDVQAAWDTLRHPTTRDAYDQQLQRQQREEQGGGFVADEVKVDEMDEEGGEHGEGGWLVYPCRCGDGFRVRK-------------DEVEGRA----GRGIVVPCDGCSLRIRV 163 + YE+L VS A+ I+ AY+ AAL THPDK L+ + + S L FL VQ AW+ LRHP +R YD+QLQ ++ + +A E+++ +M E + L+YPCRCGD F + EVE +A +V+ C CSL++R+ Sbjct: 234 TLYEVLSVSEDATYGEIRAAYKSAALNTHPDKGHTTLE------SSVPSSEL---QEFLSVQRAWEILRHPASRADYDKQLQSSRQNIE---IIASEIEIRDMIVE--STADTVELLYPCRCGDYFSITSCELGDMGILVSGDGEVEQQASDSSSASVVLGCGSCSLKVRL 390
BLAST of NO03G00650 vs. NCBI_GenBank
Match: XP_002895751.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY54715.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 86.7 bits (213), Expect = 7.600e-14 Identity = 60/161 (37.27%), Postives = 86/161 (53.42%), Query Frame = 0 Query: 9 SFYEILGVSPSASPATIKRAYQQAALATHPDKTRPVLQPIRPIPTGMDSDSLPTYPSFLDVQAAWDTLRHPTTRDAYDQQLQRQQ---REEQGGGFVADEVKVDEMDEE--GGEHGEGGWLVYP--CRCGDGFRVRKDEVEGRAGRGIVVPCDGCSLRIRV 163 SFY++LGV S+S ++RAY QAA HPDK + D D FL VQ A++TL + R YD ++Q+ + + EQ V+DE+ + +M E GE G+ ++Y CRCGD + + +DE++ VVPC GCSL IRV Sbjct: 5 SFYDVLGVQASSSAEDVRRAYHQAARKYHPDKRSNDVNAYNT----HDEDE----QQFLRVQEAYETLGNEDLRRDYDTKMQQDELVRKREQEIVVVSDEIPLVDMQREILKGEDGDEDEVIYTHHCRCGDLYEITQDELQDGVD---VVPCTGCSLHIRV 154
BLAST of NO03G00650 vs. NCBI_GenBank
Match: XP_002466012.2 (DPH4 homolog [Sorghum bicolor] >KXG40388.1 hypothetical protein SORBI_3001G537900 [Sorghum bicolor]) HSP 1 Score: 85.9 bits (211), Expect = 1.300e-13 Identity = 59/171 (34.50%), Postives = 85/171 (49.71%), Query Frame = 0 Query: 9 SFYEILGVSPSASPATIKRAYQQAALATHPDKTRPVLQPIRPIPTGMDSDSLPTYPSFLDVQAAWDTLRHPTTRDAYDQQLQRQQREEQGGGFVADEVKVDEMDEEGGEHGEGGWLVYPCRCGDGFRVRK-------------DEVE----GRAGRGIVVPCDGCSLRIRV 163 + YE+ VS A+ I+ AY+ AAL THPDK + L+ +P+ + F VQ AW+ LRHP +R YD+QLQ ++ + +A E+KV +M E + L+YPCRCGD F + EVE A +V+ C CSL+IR+ Sbjct: 12 TLYEVFSVSEDATYDEIRAAYRSAALNTHPDKAQTTLE--SSVPSSEQQE-------FCSVQKAWEILRHPASRADYDKQLQSSRQNIE---IIASEIKVGDMIIE--STADTVELLYPCRCGDYFFITSCQLSEMGIFVSGDGEVELQASDSASASVVLGCGSCSLKIRL 168
BLAST of NO03G00650 vs. NCBI_GenBank
Match: XP_020580896.1 (DPH4 homolog [Phalaenopsis equestris] >XP_020580897.1 DPH4 homolog [Phalaenopsis equestris]) HSP 1 Score: 85.9 bits (211), Expect = 1.300e-13 Identity = 57/163 (34.97%), Postives = 82/163 (50.31%), Query Frame = 0 Query: 6 STTSFYEILGVSPSASPATIKRAYQQAALATHPDKTRPVLQPIRPIPTGMDSDSLPTYPSFLDVQAAWDTLRHPTTRDAYDQQLQRQQREEQGGGFVADEVKVDEMDEEGGEHGEGGWLVYPCRCGDGFRVRKDEVE------GRAGRGIVVPCDGCSLRIRV 163 S + Y+IL V+ AS I+ Y+ A L +HPDK PI P + FL+VQ AW+ L P +R YD LQ + E + V +E+K+ EM + G+G L Y CRCGD F + E++ +G +++PCD CSL+I V Sbjct: 8 SLRTHYDILSVNEDASYDQIRENYKIAVLRSHPDKLCASPVPIHPTKNRQE--------IFLNVQKAWEVLSDPKSRQDYDDLLQASRNEAE---VVDNEIKLGEMVVQ--VDGDGKELSYQCRCGDHFFISSVELQELGFSVKTSGASVILPCDSCSLKISV 157
BLAST of NO03G00650 vs. NCBI_GenBank
Match: XP_012197830.1 (hypothetical protein SPRG_03843 [Saprolegnia parasitica CBS 223.65] >KDO31225.1 hypothetical protein SPRG_03843 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 85.5 bits (210), Expect = 1.700e-13 Identity = 60/156 (38.46%), Postives = 80/156 (51.28%), Query Frame = 0 Query: 9 SFYEILGVSPSASPATIKRAYQQAALATHPDKTRPVLQPIRPIPTGMDSDSLPTYPSFLDVQAAWDTLRHPTTRDAYDQQLQRQQREEQGGGFVADEVKVDEM--DEEGGEHGEGGWLVYPCRCGDGFRVRKDEVEGRAGRGIVVPCDGCSLRIRV 163 S Y++LGV+ S IK+AY A L +HPDK + D SL F V AA+ LR TR AYD LQ + ++ ++DEV +D+M DEE G + + CRCG+ + + DE+E VVPCDGCSL IRV Sbjct: 3 SHYDLLGVATDCSQDEIKQAYHAAILMSHPDKQK----------AADDVSSL----DFQQVHAAYQALRSAETRRAYDLSLQEAKLRDEKR--ISDEVDLDDMTFDEESGCY------AHACRCGEHYYISVDELEDGTD---VVPCDGCSLNIRV 133
BLAST of NO03G00650 vs. NCBI_GenBank
Match: ETL94310.1 (hypothetical protein L917_07678 [Phytophthora parasitica] >ETP45632.1 hypothetical protein F442_07971 [Phytophthora parasitica P10297]) HSP 1 Score: 84.7 bits (208), Expect = 2.900e-13 Identity = 62/161 (38.51%), Postives = 83/161 (51.55%), Query Frame = 0 Query: 9 SFYEILGVSPSASPATIKRAYQQAALATHPDKTRPVLQPIRPIPTGMDSDSLPTYPSFLDVQAAWDTLRHPTTRDAYDQQLQRQQ---REEQGGGFVADEVKVDEMDEE--GGEHGEGGWLVY--PCRCGDGFRVRKDEVEGRAGRGIVVPCDGCSLRIRV 163 SFY++LGV+ S I+RAY QAA HPDK L + T FL VQ A++TL + R YD +LQ+ + + EQ V+D V VD+M E GE G ++Y CRCGD + + + E++ VVPC GCSL IRV Sbjct: 5 SFYDVLGVAACCSAEDIRRAYHQAARKYHPDKR---LNDVNASNTNEQ--------QFLRVQEAYETLGNEELRREYDAKLQQDELVRKREQEVVVVSDVVLVDDMQREVLPGEDGGEDEVIYTHQCRCGDLYEITEGELQDGVD---VVPCTGCSLHIRV 151 The following BLAST results are available for this feature:
BLAST of NO03G00650 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G00650 ID=NO03G00650|Name=NO03G00650|organism=Nannochloropsis oceanica|type=gene|length=2359bpback to top protein sequence of NO03G00650.1 >NO03G00650.1-protein ID=NO03G00650.1-protein|Name=NO03G00650.1|organism=Nannochloropsis oceanica|type=polypeptide|length=165bpback to top Synonyms
Publications
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