NO03G00580, NO03G00580 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO03G00580
Unique Name	NO03G00580
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	5647
Alignment location	chr3:186846..192492 +

Link to JBrowse

Properties


Property Name	Value
Description	Dead box family RNA helicase

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr3	genome	chr3:186846..192492 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
PXD016054	2021-01-14
PXD016699	2021-01-08
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
PXD010030	2020-03-16
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
PXD008721	2019-04-30
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0005524	ATP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR014014	RNA_helicase_DEAD_Q_motif
IPR011545	DEAD/DEAH_box_helicase_dom
IPR014001	Helicase_ATP-bd
IPR001650	Helicase_C

Homology

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BLAST of NO03G00580 vs. NCBI_GenBank
Match: XP_002296387.1 (dead box family RNA helicase [Thalassiosira pseudonana CCMP1335] >EED87083.1 dead box family RNA helicase [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 619.0 bits (1595), Expect = 1.200e-173
Identity = 313/426 (73.47%), Postives = 354/426 (83.10%), Query Frame = 0

Query:   43 ELVDYDEXXXXXXXGAEV----GGEEGRKGHYVGVHASGFKDFLLKAELLRALVDCGFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLSTLHLLEPK----DEECPSVIVIGHTRELAFQISKEYARFGKYLPQVRVAVFYGGVPIKQNMELLNSDQKPHIIVGTPGRILELVRKKVLKLDHVKRFVLDECDKLLDALDMRRDIQEIFRATPHEKQVMMFSATLSKEIRPVCRKFCQAPLEIFVDDETKLTLHGLQQFYIKLGPEEKNRKLNELLDALEFNQVVIFVSKVNRANALNKLLVDCNFPSICIHGGMSMDERIQKYNSFKNWEKRLLVATDLFGRGIDIQRVNVVINYDFPTGEDGSDSYLHRVGRAGRFGTKGLAISFISTPEDAEQLAAVQSRFEVRIPELPDTIETSLYM 461
            +LVDYDEXXXXX   AE       +E +KGHYVG+HASGFKDF+LK E LRA+VDCGFEHPSEVQHECIPQA+LGMDI+CQAKSGMGKTAVFVL+TLH L P      E   SV+V+ HTRELAFQI+ EY RF KYLP+V+ AVFYGGV IK N ++L +D  PHI+VGTPGR+L L R+K LKLDH+K FVLDECD++L++LDMRRDIQEIFR TPHEKQVMMFSATLSKEIRPVC+KFCQ P+EI+VDD+TKLTLHGLQ +Y+KL   EKNRKLN+LLDALEFNQVVIFVSKV RAN LN+LL +CNFPSICIH G   DERI KY SFK +  R+LV+TDLFGRGIDI+RVNVVINYDFP   D SD +LHRVGRAGRFGTKGLAISFIS+  D E L  VQSRFEV IPELPD I+ S YM
Sbjct:   10 DLVDYDEXXXXXNVVAEKTADGDSKEVKKGHYVGIHASGFKDFILKPECLRAVVDCGFEHPSEVQHECIPQAVLGMDIVCQAKSGMGKTAVFVLATLHQLNPNAFPAGENQVSVLVLCHTRELAFQIAHEYERFSKYLPEVKTAVFYGGVSIKTNRDVLKND-CPHIVVGTPGRVLGLAREKTLKLDHIKHFVLDECDRILESLDMRRDIQEIFRMTPHEKQVMMFSATLSKEIRPVCKKFCQDPMEIYVDDDTKLTLHGLQLYYVKLAEAEKNRKLNDLLDALEFNQVVIFVSKVARANELNRLLTECNFPSICIHAGQKQDERIAKYKSFKEFNARILVSTDLFGRGIDIERVNVVINYDFP---DDSDQFLHRVGRAGRFGTKGLAISFISSEPDQEILDKVQSRFEVNIPELPDEIDASAYM 431

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BLAST of NO03G00580 vs. NCBI_GenBank
Match: XP_008613771.1 (DEAD-box ATP-dependent RNA helicase 15 [Saprolegnia diclina VS20] >XP_012201836.1 DEAD-box ATP-dependent RNA helicase 15 [Saprolegnia parasitica CBS 223.65] >EQC33085.1 DEAD-box ATP-dependent RNA helicase 15 [Saprolegnia diclina VS20] >KDO27396.1 DEAD-box ATP-dependent RNA helicase 15 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 615.1 bits (1585), Expect = 1.700e-172
Identity = 300/418 (71.77%), Postives = 352/418 (84.21%), Query Frame = 0

Query:   43 ELVDYDEXXXXXXXGAEVGGEEGRKGHYVGVHASGFKDFLLKAELLRALVDCGFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLSTLHLLEPKDEECPSVIVIGHTRELAFQISKEYARFGKYLPQVRVAVFYGGVPIKQNMELLNSDQKPHIIVGTPGRILELVRKKVLKLDHVKRFVLDECDKLLDALDMRRDIQEIFRATPHEKQVMMFSATLSKEIRPVCRKFCQAPLEIFVDDETKLTLHGLQQFYIKLGPEEKNRKLNELLDALEFNQVVIFVSKVNRANALNKLLVDCNFPSICIHGGMSMDERIQKYNSFKNWEKRLLVATDLFGRGIDIQRVNVVINYDFPTGEDGSDSYLHRVGRAGRFGTKGLAISFISTPEDAEQLAAVQSRFEVRIPELPDTIETSLYM 461
            EL+DY E         +    E +KGHYVG+H++GFKDFLLK E LRA+VDCGFEHPSEVQHECIPQA+LGMDIICQAKSGMGKTAVFVL+TLH LEP  E+  SVIV+ HTRELAFQI+ EY RF KYLP V+ AVFYGGVPI QN E L  +  PHI+VGTPGR+L L+++K LKLD VK FV+DECDKLLD++DMRRD+Q+IF+ATPH+KQVM+FSATLSKE+RPVCRKFCQ P+EI+VDDETKLTLHGLQQ++IKL   EKNRKLN+LLDALEFNQVVIFVSK NRA  LN+LL +CNFP+ICI   ++ DERI++Y SFK ++KR+LV TDLFGRG+DI+RVN+VINYDFP   + SD YLHRVGRAGRFGTKGL+ISFIS+ ED++ LA VQSRFEV IPELPD I+ S YM
Sbjct:   11 ELLDYGEDDEVTTTAEKAAPTETKKGHYVGIHSAGFKDFLLKPECLRAVVDCGFEHPSEVQHECIPQAVLGMDIICQAKSGMGKTAVFVLATLHQLEPVAEQI-SVIVLCHTRELAFQIAHEYERFSKYLPDVKTAVFYGGVPIVQNRETL-KNTPPHILVGTPGRVLGLLKEKTLKLDKVKHFVMDECDKLLDSVDMRRDVQDIFKATPHDKQVMLFSATLSKEVRPVCRKFCQDPMEIYVDDETKLTLHGLQQYFIKLQEAEKNRKLNDLLDALEFNQVVIFVSKKNRARELNRLLNECNFPAICITSDLAQDERIKRYKSFKEFQKRILVTTDLFGRGMDIERVNIVINYDFP---NDSDQYLHRVGRAGRFGTKGLSISFISSNEDSDMLAKVQSRFEVNIPELPDQIDISTYM 423

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BLAST of NO03G00580 vs. NCBI_GenBank
Match: CCA18117.1 (predicted protein putative [Albugo laibachii Nc14])

HSP 1 Score: 614.0 bits (1582), Expect = 3.800e-172
Identity = 299/418 (71.53%), Postives = 354/418 (84.69%), Query Frame = 0

Query:   43 ELVDYDEXXXXXXXGAEVGGEEGRKGHYVGVHASGFKDFLLKAELLRALVDCGFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLSTLHLLEPKDEECPSVIVIGHTRELAFQISKEYARFGKYLPQVRVAVFYGGVPIKQNMELLNSDQKPHIIVGTPGRILELVRKKVLKLDHVKRFVLDECDKLLDALDMRRDIQEIFRATPHEKQVMMFSATLSKEIRPVCRKFCQAPLEIFVDDETKLTLHGLQQFYIKLGPEEKNRKLNELLDALEFNQVVIFVSKVNRANALNKLLVDCNFPSICIHGGMSMDERIQKYNSFKNWEKRLLVATDLFGRGIDIQRVNVVINYDFPTGEDGSDSYLHRVGRAGRFGTKGLAISFISTPEDAEQLAAVQSRFEVRIPELPDTIETSLYM 461
            ELVDY+E          V  ++ +KGHYVG+H+SGF+DF+LK E LRA+VDCGFEHPSEVQHECIPQA+LGMDIICQAKSGMGKTAVFVL+TLH +EP D +  SV+V+ HTRELAFQI+ EY RF KYL  V+ AVFYGG+ I ++ + L S+  PHI+VGTPGRIL L+R+K +KLD VK FV+DECDKLL+ALDMRRD+QEIFR+TPH+KQVMMFSATLSKEIRPVCRKFCQ P+EI+VDDETKLTLHGLQQ+YIKL   EKNRKLNELLDALEFNQVVIFVSK NRA  LN+LL +CNFP+ICI   ++ +ERI++Y SFK+++KRLLV TDLFGRG+DI+RVN+VINYDFP   + SD YLHRVGRAGRFGTKGL+ISFIS+ ED+  LA VQSRFEV +PELPD+I+ S YM
Sbjct:   12 ELVDYEEEEETNENNKTVESKDAKKGHYVGIHSSGFRDFILKPECLRAVVDCGFEHPSEVQHECIPQAVLGMDIICQAKSGMGKTAVFVLATLHQIEPVDGQI-SVMVLCHTRELAFQIAHEYERFSKYLHNVKTAVFYGGIAITKDRDTLKSN-TPHIVVGTPGRILGLLREKSIKLDKVKHFVMDECDKLLEALDMRRDVQEIFRSTPHDKQVMMFSATLSKEIRPVCRKFCQDPMEIYVDDETKLTLHGLQQYYIKLAESEKNRKLNELLDALEFNQVVIFVSKKNRARELNRLLNECNFPAICITSDLTQEERIKRYKSFKDFQKRLLVTTDLFGRGMDIERVNIVINYDFP---NDSDQYLHRVGRAGRFGTKGLSISFISSDEDSAMLAQVQSRFEVNVPELPDSIDISTYM 424

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BLAST of NO03G00580 vs. NCBI_GenBank
Match: XP_008868859.1 (DEAD-box ATP-dependent RNA helicase 56 [Aphanomyces invadans] >XP_008868860.1 DEAD-box ATP-dependent RNA helicase 56, variant [Aphanomyces invadans] >ETW02254.1 DEAD-box ATP-dependent RNA helicase 56 [Aphanomyces invadans] >ETW02255.1 DEAD-box ATP-dependent RNA helicase 56, variant [Aphanomyces invadans])

HSP 1 Score: 613.6 bits (1581), Expect = 5.000e-172
Identity = 299/418 (71.53%), Postives = 351/418 (83.97%), Query Frame = 0

Query:   43 ELVDYDEXXXXXXXGAEVGGEEGRKGHYVGVHASGFKDFLLKAELLRALVDCGFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLSTLHLLEPKDEECPSVIVIGHTRELAFQISKEYARFGKYLPQVRVAVFYGGVPIKQNMELLNSDQKPHIIVGTPGRILELVRKKVLKLDHVKRFVLDECDKLLDALDMRRDIQEIFRATPHEKQVMMFSATLSKEIRPVCRKFCQAPLEIFVDDETKLTLHGLQQFYIKLGPEEKNRKLNELLDALEFNQVVIFVSKVNRANALNKLLVDCNFPSICIHGGMSMDERIQKYNSFKNWEKRLLVATDLFGRGIDIQRVNVVINYDFPTGEDGSDSYLHRVGRAGRFGTKGLAISFISTPEDAEQLAAVQSRFEVRIPELPDTIETSLYM 461
            EL+DY               +E +KGHYVG+H++GFKDFLLK E LRA+VDCGFEHPSEVQHECIPQA+LGMDIICQAKSGMGKTAVFVL+TLH LEP   +  SV+V+ HTRELAFQI+ EY RF KYLP V+ AVFYGGVPI QN E L ++  PHIIVGTPGR+L L+++K LKLD VK FV+DECDKLLDA+DMRRD+QEIF++TPH+KQVM+FSATLSKEIRPVCRKFCQ P+EI+VDDETKLTLHGLQQ+YIKL   EKNRKLN+LLDALEFNQVVIFVSK NRA  L++LL +CNFPSICI   +  +ERI++Y SFK+++KR+LV TDLFGRG+DI+RVN+V+NYDFP   + SD YLHRVGRAGRFGTKGL+ISFIS+ ED++ LA VQSRFEV IPELPD I+ S YM
Sbjct:    6 ELLDYGSDEEVAVDNKAAVAKETKKGHYVGIHSAGFKDFLLKPEALRAVVDCGFEHPSEVQHECIPQAVLGMDIICQAKSGMGKTAVFVLATLHQLEPVANQI-SVVVLCHTRELAFQIAHEYERFSKYLPDVKTAVFYGGVPIVQNRETLKNN-PPHIIVGTPGRVLGLIKEKTLKLDKVKHFVMDECDKLLDAVDMRRDVQEIFKSTPHDKQVMLFSATLSKEIRPVCRKFCQDPMEIYVDDETKLTLHGLQQYYIKLQESEKNRKLNDLLDALEFNQVVIFVSKKNRARELSRLLNECNFPSICITADLQQEERIKRYKSFKDFQKRILVTTDLFGRGMDIERVNIVVNYDFP---NDSDQYLHRVGRAGRFGTKGLSISFISSNEDSDMLAKVQSRFEVNIPELPDQIDISTYM 418

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BLAST of NO03G00580 vs. NCBI_GenBank
Match: GAX16701.1 (ATP-dependent RNA helicase UAP56/SUB2 [Fistulifera solaris] >GAX10444.1 ATP-dependent RNA helicase UAP56/SUB2 [Fistulifera solaris])

HSP 1 Score: 612.8 bits (1579), Expect = 8.500e-172
Identity = 305/420 (72.62%), Postives = 346/420 (82.38%), Query Frame = 0

Query:   43 ELVDYDEXXXXXXXGAEVG-GEEGRKGHYVGVHASGFKDFLLKAELLRALVDCGFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLSTLHLLEPKDE-ECPSVIVIGHTRELAFQISKEYARFGKYLPQVRVAVFYGGVPIKQNMELLNSDQKPHIIVGTPGRILELVRKKVLKLDHVKRFVLDECDKLLDALDMRRDIQEIFRATPHEKQVMMFSATLSKEIRPVCRKFCQAPLEIFVDDETKLTLHGLQQFYIKLGPEEKNRKLNELLDALEFNQVVIFVSKVNRANALNKLLVDCNFPSICIHGGMSMDERIQKYNSFKNWEKRLLVATDLFGRGIDIQRVNVVINYDFPTGEDGSDSYLHRVGRAGRFGTKGLAISFISTPEDAEQLAAVQSRFEVRIPELPDTIETSLYM 461
            ELVDYDE         + G  ++ +KGHYVG+HASGFKDFLLK ELLRA+VD GFEHPSEVQHE IPQA+LG DI+CQAKSGMGKTAVFVL+TLH L   DE +   V+V+ HTRELAFQI+ EY RF KYLP ++ AVFYGGV IKQN E+L++D  PHI+VGTPGRIL L R+K LKL  VK FVLDECD++L+ALDMRRD+QEIFR TPHEKQV++FSATLSKEIRPVC+KFCQ P+EI+VDDETKLTLHGLQ +Y KL   EKNRKLN+LLDALEFNQVVIFVSKV RA  LN+LL +CNFPSICIH GM  DERI KY SFK++  R+LVATDLFGRGIDI+RVNVVINYDFP   D SD +LHRVGRAGRFGTKG+AISFIS+  D E L  VQSRFEV IPELPD I+ S YM
Sbjct:    7 ELVDYDEEEEVADIAKDAGKAKDSKKGHYVGIHASGFKDFLLKPELLRAIVDAGFEHPSEVQHESIPQAVLGGDIVCQAKSGMGKTAVFVLATLHQLNASDESQDVQVLVLCHTRELAFQIAHEYERFSKYLPSIKTAVFYGGVSIKQNREILSNDH-PHIVVGTPGRILALAREKALKLSAVKHFVLDECDRVLEALDMRRDVQEIFRMTPHEKQVLLFSATLSKEIRPVCKKFCQDPMEIYVDDETKLTLHGLQLYYAKLAEAEKNRKLNDLLDALEFNQVVIFVSKVARAKELNRLLTECNFPSICIHAGMKQDERITKYKSFKDFNARILVATDLFGRGIDIERVNVVINYDFP---DDSDQFLHRVGRAGRFGTKGIAISFISSEADKEILEKVQSRFEVNIPELPDEIDMSTYM 422

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BLAST of NO03G00580 vs. NCBI_GenBank
Match: EJK56348.1 (hypothetical protein THAOC_23784 [Thalassiosira oceanica])

HSP 1 Score: 610.1 bits (1572), Expect = 5.500e-171
Identity = 297/398 (74.62%), Postives = 337/398 (84.67%), Query Frame = 0

Query:   67 KGHYVGVHASGFKDFLLKAELLRALVDCGFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLSTLHLLEPK----DEECPSVIVIGHTRELAFQISKEYARFGKYLPQVRVAVFYGGVPIKQNMELLNSDQKPHIIVGTPGRILELVRKKVLKLDHVKRFVLDECDKLLDALDMRRDIQEIFRATPHEKQVMMFSATLSKEIRPVCRKFCQAPLEIFVDDETKLTLHGLQQFYIKLGPEEKNRKLNELLDALEFNQVVIFVSKVNRANALNKLLVDCNFPSICIHGGMSMDERIQKYNSFKNWEKRLLVATDLFGRGIDIQRVNVVINYDFPTGEDGSDSYLHRVGRAGRFGTKGLAISFISTPEDAEQLAAVQSRFEVRIPELPDTIETSLYM 461
            +GHYVG+HASGFKDF+LK E LRA+VDCGFEHPSEVQHECIPQA+LGMDI+CQAKSGMGKTAVFVL+TLH L+P      E   SV+V+ HTRELAFQI+ EY RF KYLP+V+ AVFYGGV IK N ++L +D  PHI+VGTPGRIL L R+K LKLDH+K FVLDECD++L+ALDMRRD+QEIFR TPHEKQVMMFSATL KEIRPVC+KFCQ P+EI+VDD+TKLTLHGLQ +Y+KL   EKNRKLN+LLDALEFNQVVIFVSKV RAN LN+LL +CNFPSICIH G   +ERI KY SFK +  R+LV+TDLFGRGIDI+RVNVVINYDFP   D SD +LHRVGRAGRFGTKGLAISFIS+  D E L  VQSRFEV IPELPD I+ S YM
Sbjct:   17 RGHYVGIHASGFKDFILKPECLRAVVDCGFEHPSEVQHECIPQAVLGMDIVCQAKSGMGKTAVFVLATLHQLDPNAFPAGENQVSVLVLCHTRELAFQIAHEYERFSKYLPEVKTAVFYGGVAIKTNRDVLKND-CPHIVVGTPGRILGLAREKTLKLDHIKHFVLDECDRMLEALDMRRDVQEIFRMTPHEKQVMMFSATLGKEIRPVCKKFCQDPMEIYVDDDTKLTLHGLQLYYVKLAEAEKNRKLNDLLDALEFNQVVIFVSKVARANELNRLLTECNFPSICIHAGQKQEERIAKYKSFKEFNARILVSTDLFGRGIDIERVNVVINYDFP---DDSDQFLHRVGRAGRFGTKGLAISFISSEPDQEILDKVQSRFEVNIPELPDEIDASAYM 410

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BLAST of NO03G00580 vs. NCBI_GenBank
Match: XP_009827129.1 (DEAD-box ATP-dependent RNA helicase 15 [Aphanomyces astaci] >ETV83699.1 DEAD-box ATP-dependent RNA helicase 15 [Aphanomyces astaci])

HSP 1 Score: 609.8 bits (1571), Expect = 7.200e-171
Identity = 296/418 (70.81%), Postives = 353/418 (84.45%), Query Frame = 0

Query:   43 ELVDYDEXXXXXXXGAEVGGEEGRKGHYVGVHASGFKDFLLKAELLRALVDCGFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLSTLHLLEPKDEECPSVIVIGHTRELAFQISKEYARFGKYLPQVRVAVFYGGVPIKQNMELLNSDQKPHIIVGTPGRILELVRKKVLKLDHVKRFVLDECDKLLDALDMRRDIQEIFRATPHEKQVMMFSATLSKEIRPVCRKFCQAPLEIFVDDETKLTLHGLQQFYIKLGPEEKNRKLNELLDALEFNQVVIFVSKVNRANALNKLLVDCNFPSICIHGGMSMDERIQKYNSFKNWEKRLLVATDLFGRGIDIQRVNVVINYDFPTGEDGSDSYLHRVGRAGRFGTKGLAISFISTPEDAEQLAAVQSRFEVRIPELPDTIETSLYM 461
            EL+DY           +   +E +KGHYVG+H++GFKDFLLK E LRA+VDCGFEHPSEVQHECIPQA+LGMDIICQAKSGMGKTAVFVL+TLH LEP + +  SV+V+ HTRELAFQI+ EY RF KYLP V+ AVFYGGVPI QN E L ++  PHI+VGTPGR+L L+++K LKLD VK FV+DECDKLLDA+DMRRD+QEIF++TPH+KQVM+FSATLSKEIRPVCRKFCQ P+EI+VDDETKLTLHGLQQ++IKL   EKNRKLN+LLDALEFNQVVIFVSK NRA  L++LL +CNFPSICI   +  +ERI++Y SFK+++KR+LV TDLFGRG+DI+RVN+V+NYDFP   + SD YLHRVGRAGRFGTKGL+ISFIS+ ED++ LA VQ+RFEV IPELPD I+ S YM
Sbjct:    6 ELLDYGSDEEVAVDN-KANAKETKKGHYVGIHSAGFKDFLLKPEALRAVVDCGFEHPSEVQHECIPQAVLGMDIICQAKSGMGKTAVFVLATLHQLEPVENQI-SVVVLCHTRELAFQIAHEYERFSKYLPDVKTAVFYGGVPIVQNRETLKNN-PPHIVVGTPGRVLGLIKEKTLKLDKVKHFVMDECDKLLDAVDMRRDVQEIFKSTPHDKQVMLFSATLSKEIRPVCRKFCQDPMEIYVDDETKLTLHGLQQYFIKLQESEKNRKLNDLLDALEFNQVVIFVSKKNRARELSRLLNECNFPSICITSDLQQEERIKRYKSFKDFQKRILVTTDLFGRGMDIERVNIVVNYDFP---NDSDQYLHRVGRAGRFGTKGLSISFISSNEDSDMLAKVQARFEVNIPELPDQIDISTYM 417

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BLAST of NO03G00580 vs. NCBI_GenBank
Match: XP_009033759.1 (hypothetical protein AURANDRAFT_52520 [Aureococcus anophagefferens] >EGB11387.1 hypothetical protein AURANDRAFT_52520 [Aureococcus anophagefferens])

HSP 1 Score: 608.2 bits (1567), Expect = 2.100e-170
Identity = 296/404 (73.27%), Postives = 346/404 (85.64%), Query Frame = 0

Query:   63 EEGRKGHYVGVHASGFKDFLLKAELLRALVDCGFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLSTLHLLEPKDEECPSVIVIGHTRELAFQISKEYARFGKYLPQVRVAVFYGGVPIKQNMELLNSDQKPHIIVGTPGRILELVRKKVLKLDHVKRFVLDECDKLLDALDMRRDIQEIFRATPHEKQVMMFSATLSKEIRPVCRKFCQAPLEIFVDDETKLTLHGLQQFYIKLGPEEKNRKLNELLDALEFNQVVIFVSKVNRANALNKLLVDCNFPSICIHGGMSMDERIQKYNSFKNWEKRLLVATDLFGRGIDIQRVNVVINYDFPTGEDG------SDSYLHRVGRAGRFGTKGLAISFISTPEDAEQLAAVQSRFEVRIPELPDTIETSLYM 461
            +E +KGHYVG+HASGF+DF+LK E LRA+VDCGFEHPSEVQHECIPQA+LGMDIICQAKSGMGKTAVFVL+TLH LEP D E  SV+V+ HTRELAFQI  EYARF KYLP V+V VFYGGVPI QN   L ++  PHI+VGTPGRIL LV+ K L L  +K FV+DECD++L+ALDMR+DIQEIFR TPH+KQVMMFSATLSKEIRPVC+KFCQ P+EI+VDD+TKLTLHGLQQ+Y+KL   EKNRKLN+LLDAL+FNQVVIFVSKV RA  L++LL +CNFPS+CIH GM+ +ERI +Y  FK+++KR+LV+TDLFGRGIDI+RVN+VINYDFP  ++G      SD YLHRVGRAGRFGTKGL+ISFIS+ EDAE LAAVQSRFEV + ELPD I+ S YM
Sbjct:   57 KEAKKGHYVGIHASGFRDFILKPECLRAVVDCGFEHPSEVQHECIPQAVLGMDIICQAKSGMGKTAVFVLATLHQLEPVDGEI-SVLVMCHTRELAFQIKNEYARFSKYLPAVKVEVFYGGVPITQNKAALKAN-TPHIVVGTPGRILGLVKSKDLVLGKLKHFVMDECDRMLEALDMRKDIQEIFRTTPHQKQVMMFSATLSKEIRPVCKKFCQDPMEIYVDDDTKLTLHGLQQYYVKLQEAEKNRKLNDLLDALDFNQVVIFVSKVARATELDRLLCECNFPSVCIHSGMTQEERITRYKDFKDFKKRILVSTDLFGRGIDIERVNIVINYDFPEVKEGAAQTTASDQYLHRVGRAGRFGTKGLSISFISSKEDAEILAAVQSRFEVNVSELPDQIDISSYM 458

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BLAST of NO03G00580 vs. NCBI_GenBank
Match: OQR98877.1 (DEAD/DEAH box RNA helicase [Thraustotheca clavata])

HSP 1 Score: 607.8 bits (1566), Expect = 2.700e-170
Identity = 299/418 (71.53%), Postives = 352/418 (84.21%), Query Frame = 0

Query:   43 ELVDYDEXXXXXXXGAEVGGEEGRKGHYVGVHASGFKDFLLKAELLRALVDCGFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLSTLHLLEPKDEECPSVIVIGHTRELAFQISKEYARFGKYLPQVRVAVFYGGVPIKQNMELLNSDQKPHIIVGTPGRILELVRKKVLKLDHVKRFVLDECDKLLDALDMRRDIQEIFRATPHEKQVMMFSATLSKEIRPVCRKFCQAPLEIFVDDETKLTLHGLQQFYIKLGPEEKNRKLNELLDALEFNQVVIFVSKVNRANALNKLLVDCNFPSICIHGGMSMDERIQKYNSFKNWEKRLLVATDLFGRGIDIQRVNVVINYDFPTGEDGSDSYLHRVGRAGRFGTKGLAISFISTPEDAEQLAAVQSRFEVRIPELPDTIETSLYM 461
            EL+DY +        A V   E +KGHYVG+H++GFKDFLLK E LRA+VDCGFEHPSEVQHECIPQA+LGMDIICQAKSGMGKTAVFVL+TLH LEP   +  SVIV+ HTRELAFQI+ EY RF KYLP V+ AVF+GGVPI QN E L  +  PHI+VGTPGR+L L+++K LKLD VK FV+DECDKLLD++DMRRD+Q+IF+ATPH+KQVM+FSATLSKEIRPVCRKFCQ P+EI+VDDETKLTLHGLQQ++IKL   EKNRKLN+LLDALEFNQVVIFVSK NRA  LN+LL +CNFP+ICI   ++ +ERI++Y SFK ++KR+LV TDLFGRG+DI+RVN+VINYDFP   + SD YLHRVGRAGRFGTKGL+ISFIS+ ED++ LA VQSRFEV IPELPD I+ S YM
Sbjct:   11 ELLDYGDDDEVTTEKAAVA--ETKKGHYVGIHSAGFKDFLLKPECLRAVVDCGFEHPSEVQHECIPQAVLGMDIICQAKSGMGKTAVFVLATLHQLEPVANQI-SVIVLCHTRELAFQIAHEYERFSKYLPDVKTAVFFGGVPIVQNRETL-KNTPPHILVGTPGRVLGLLKEKTLKLDKVKHFVMDECDKLLDSVDMRRDVQDIFKATPHDKQVMLFSATLSKEIRPVCRKFCQDPMEIYVDDETKLTLHGLQQYFIKLQESEKNRKLNDLLDALEFNQVVIFVSKKNRARELNRLLNECNFPAICITAELAQEERIKRYKSFKEFQKRILVTTDLFGRGMDIERVNIVINYDFP---NDSDQYLHRVGRAGRFGTKGLSISFISSNEDSDMLAKVQSRFEVNIPELPDQIDISTYM 421

[Close]

BLAST of NO03G00580 vs. NCBI_GenBank
Match: XP_008903594.1 (ATP-dependent RNA helicase uap56 [Phytophthora parasitica INRA-310] >ETI48995.1 ATP-dependent RNA helicase uap56 [Phytophthora parasitica P1569] >ETK88863.1 ATP-dependent RNA helicase uap56 [Phytophthora parasitica] >ETL42261.1 ATP-dependent RNA helicase uap56 [Phytophthora parasitica] >ETL95435.1 ATP-dependent RNA helicase uap56 [Phytophthora parasitica] >ETN11111.1 ATP-dependent RNA helicase uap56 [Phytophthora parasitica INRA-310] >ETO77733.1 ATP-dependent RNA helicase uap56 [Phytophthora parasitica P1976] >ETP18762.1 ATP-dependent RNA helicase uap56 [Phytophthora parasitica CJ01A1] >ETP46682.1 ATP-dependent RNA helicase uap56 [Phytophthora parasitica P10297] >KUF75768.1 DEAD-box ATP-dependent RNA helicase 56 [Phytophthora nicotianae] >KUG01196.1 DEAD-box ATP-dependent RNA helicase 56 [Phytophthora nicotianae])

HSP 1 Score: 604.4 bits (1557), Expect = 3.000e-169
Identity = 297/420 (70.71%), Postives = 347/420 (82.62%), Query Frame = 0

Query:   43 ELVDYDEXXXXXXXGAEVG--GEEGRKGHYVGVHASGFKDFLLKAELLRALVDCGFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLSTLHLLEPKDEECPSVIVIGHTRELAFQISKEYARFGKYLPQVRVAVFYGGVPIKQNMELLNSDQKPHIIVGTPGRILELVRKKVLKLDHVKRFVLDECDKLLDALDMRRDIQEIFRATPHEKQVMMFSATLSKEIRPVCRKFCQAPLEIFVDDETKLTLHGLQQFYIKLGPEEKNRKLNELLDALEFNQVVIFVSKVNRANALNKLLVDCNFPSICIHGGMSMDERIQKYNSFKNWEKRLLVATDLFGRGIDIQRVNVVINYDFPTGEDGSDSYLHRVGRAGRFGTKGLAISFISTPEDAEQLAAVQSRFEVRIPELPDTIETSLYM 461
            ELVDY+E        ++    G++ +KGHYVG+H+SGF+DF+LK E LRA+VDCGFEHPSEVQHECIPQA+LGMDIICQAKSGMGKTAVFVL+TLH +EP D +  SV+V+ HTRELAFQI+ EY RF KYL  V+  VFYGGVPI QN E L ++  PHI+VGTPGRIL L+R+K LKLD VK FV+DECDK+L+A+DMRRDIQEIF+ATPH+KQVMMFSATLSKEIRPVCRKFCQ P+EI+VDDETKLTLHGLQQ+YIKL   EKNRKLN+LLDALEFNQVVIFVSK N           CNFPSICI   +S +ERI++Y SFK+++KR+LV TDLFGRG+DI+RVN+V+NYDFP   + SD YLHRVGRAGRFGTKGL+ISFIS+ ED E LA VQSRFEV IPELPD I+ S YM
Sbjct:   12 ELVDYEEEEETSTDASKAAAEGKDAKKGHYVGIHSSGFRDFILKPECLRAVVDCGFEHPSEVQHECIPQAVLGMDIICQAKSGMGKTAVFVLATLHQIEPVDGQI-SVVVMCHTRELAFQIAHEYERFSKYLVDVKTGVFYGGVPISQNREALKNN-PPHILVGTPGRILGLLREKTLKLDKVKHFVMDECDKMLEAIDMRRDIQEIFKATPHDKQVMMFSATLSKEIRPVCRKFCQDPMEIYVDDETKLTLHGLQQYYIKLEESEKNRKLNDLLDALEFNQVVIFVSKKNXXXXXXXXXXXCNFPSICITADLSQEERIKRYKSFKDFQKRILVTTDLFGRGMDIERVNIVVNYDFP---NDSDQYLHRVGRAGRFGTKGLSISFISSEEDTEMLAKVQSRFEVNIPELPDQIDISTYM 426

The following BLAST results are available for this feature:

BLAST of NO03G00580 vs. NCBI_GenBank

BLAST of NO03G00580 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
XP_002296387.1	1.200e-173	73.47	dead box family RNA helicase [Thalassiosira pseudo...	[more]
XP_008613771.1	1.700e-172	71.77	DEAD-box ATP-dependent RNA helicase 15 [Saprolegni...	[more]
CCA18117.1	3.800e-172	71.53	predicted protein putative [Albugo laibachii Nc14]	[more]
XP_008868859.1	5.000e-172	71.53	DEAD-box ATP-dependent RNA helicase 56 [Aphanomyce...	[more]
GAX16701.1	8.500e-172	72.62	ATP-dependent RNA helicase UAP56/SUB2 [Fistulifera...	[more]
EJK56348.1	5.500e-171	74.62	hypothetical protein THAOC_23784 [Thalassiosira oc...	[more]
XP_009827129.1	7.200e-171	70.81	DEAD-box ATP-dependent RNA helicase 15 [Aphanomyce...	[more]
XP_009033759.1	2.100e-170	73.27	hypothetical protein AURANDRAFT_52520 [Aureococcus...	[more]
OQR98877.1	2.700e-170	71.53	DEAD/DEAH box RNA helicase [Thraustotheca clavata]	[more]
XP_008903594.1	3.000e-169	70.71	ATP-dependent RNA helicase uap56 [Phytophthora par...	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL065	nonsL065	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR000	ncniR000	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR053	ngnoR053	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR050	ngnoR050	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK005883	NSK005883	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO03G00580.1	NO03G00580.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|571438	gene_1235	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100928g1	gene1143	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO03G00580.1	NO03G00580.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO03G00580 ID=NO03G00580|Name=NO03G00580|organism=Nannochloropsis oceanica|type=gene|length=5647bp
TGTCATATTTGGCACACGCACCTGCACGGAATGAGTGGATGGTTGGTAGG
TATGTGATAGAGAAAGGAGAGGTAAGATGGAAGGCAACGAAGAGAATAAG
CAGAAGTGAAGGGTCGTCGGAATGCGAGGCCTAAACAAGGACCCGAGACC
TCAGCATAGGACCAACATAGGGACTACATTCCCAAGCGTCTTTATGGAGG
GGTGGTGGAGGTTTGTGTGTTTGGATGACATAAGCTAGCTCTAGCTGGGC
TTGTCAAAACTGGGGGCACGTTTCATCAAACTTTCAGGCTGCTCTTCTGC
GGCCACGCGACTTTGCCTGTGATGCTCGGCAGCCACCCAGACCCCATCGC
CACCATTGCGCGCAAGCCTGCAAAACGCAGCATCTCCTTGAACACATTGC
TGTGGCGTACCTGCGTTGTATTTCCGGGTCATGGCACTTGGTGCAGCGGA
TGGCAGAACCCGCGTGGAGACGCCATAGTACTTTGTTCTTTATCTTCCTC
TCGTAGGCTACATCATACACCGTAGCTCCACCATATCCATCATGAGCTAC
CTAGCACCCTCCGAAGCCAGCGCCACGACCATACCTTGGTCTGAGTGGAC
AAGACCAAGACCCGCGGCAGCAGCCAGAGGAAACAGGTTAGGAGGGTGGA
TGGCTAGGCTCTGCATCACCTTCTTCTTCTCCTCCTTCTTCGCCGCACCA
GACCTCGCACAATAAGATGCTGCCAGCAGCAACGACGACGACAAACATCA
GCAGCATCAACGGGGGCAGCACAACAGCAGTGTGGTGGCGGCGGTGCTGG
AGGTAGATTAGGACCGGATAGTCATGCGTGGCCATGACAGAACAAAATCT
AGAGGCGGCGACAGGAGAGAGACTCCTCCGTCTGCTCCCCACCTTCCCCA
ATTTCATTCACCTTAAGAACATATGACCCCTGTCTCCATGCGTCTAGACG
GGATTTGTTAGTACGCATGTCTCTCTTTGCTCCCTTTGCATCTCTTTTCC
CACATCACCACCTTACCGCGACGGACGGCCTCCGAAGAAGTTGCAAACCG
ATGACCACCACAACAAGGTGCGGCGGCGGCGGCGCCTCGCTCCGTAGTAG
AGTGCGTCGCCCGCAGGCACACAGACCCAAGCCGCGGCCATAGCCCTGCT
GGCCTGCCCCCACCACCTCCAGCCTGCACAGCTGACCCCAACCCATGTTC
CATCCACACACATTTTCCGGTACTCTACTACCACCCCACGCGCAGACACT
TCTTTTTTCTTCTTCCAGTTTCATCACCAGCGTTATGGCGGACACGACGA
CGGCAGCGACCAACGAGGATGAGCTTGTGGACTACGACGAGGAGAATGAG
CAGGAGGAGAAGgtgcgtggttaggtgggggagggagggagggaggaagg
gagggagggagggaggagaaaacgatggaggaggcagagactgagataga
ctcctgcaaagagcgcacatcaaagactcagagtaggaagagaggaggag
gacggtcttcaccgggaggggaatgagtttggggctcgctgtgttatcta
ctcacctcacacctccatccccttgatgttaatccccctcctctcttgtc
atcgcttaaccctccatcagGGAGCCGAGGTCGGGGGGGAGGAAGGGCGC
AAAGGCCACTACGTCGGCGTGCATGCGTCGGGTTTCAAGGATTTTCTCTT
GAAGGCGGAGTTGCTCCGCGCCTTGGTTGACTGCGGTTTCGAACACCCTT
CCGAAGgtatgacgacatgcatactacatgactattatgacgaggacgac
gaccatatggcgatgatgatgacttggacttattgagaggagggggggat
aaaaaaattctggagggagggaaggagagagagggagggaggaaggggaa
gagggaacgggatggaggaacgccctcgagaaaactatgacttatgagtc
tcttccttttcccccttctctccttccctccctccctccctccctcgctc
agTGCAACACGAGTGCATCCCGCAGGCCATCCTGGGCATGGACATCATCT
GCCAAGCCAAGTCGGGCATGGGCAAGACGGCCGTCTTCGTCCTCTCCACG
CTCCACCTCCTCGAGCCCAAAgtatggatgactcaggagggagggaggga
gggagggagggaaggagggagggagggaaggggggaaggagggagggagg
gaaggggggaaggagggagggagggaaggggggaaggagggagggagggg
ggacggacggaaagccgaaaacacccttttccttgcgcatcaacctctca
gactccccccccccctcctccttccctccttcccttccttccttcttgtt
cccagGACGAGGAGTGTCCGTCGGTGATCGTCATCGGCCACACGCGCGAG
CTGGCCTTCCAGATCTCCAAGGAATACGCCCGCTTCGGGAAATACTTGCC
GCAGgtccgtctggcccctccctccctccctccctcattccctctctccc
tccctccctccctccctccctcctttccccccctcgcctgcggtgtttct
ttgcacccatttgtcttccctgacagactatctcgcccctcacctgtgat
ccctccctctctccctccctccctccctcccttcctctctcccagGTCCG
CGTAGCTGTGTTCTACGGCGGCGTGCCCATCAAGCAGAACATGGAGCTGT
TGAACAGCGACCAGAAGCCTCACATCATCGTGGGGACGCCCGGCCGCATC
CTTGAGCTGGTCCGCAAGAAGgtgtgtgtgacgtctttccctcccttttt
ccctccctccctccctcctttcctccctttccctctctcttttttttctc
ctccctccctccctccctcccttcaatctttgctcgggtagtgcaagcag
ccacatgccgctcaaccctccccccgcctgtccctccctccttcagGTCC
TCAAGCTCGACCATGTGAAGCGCTTCGTCCTCGACGAATGCGACAAGCTC
CTGGACGCCCTCGACATGCGCCGTGATATTCAAGAGATTTTTCGCGCCAC
GCCCCATGAGAAGCAGgtagacaccctccctccctcccacccactcttca
actctcctcccctccctccctccctccttccgtccctccctccctctcct
tccccccctctcggcccctttccgtcagataagcatctcccctgctgctt
cggtcgaaactcaccccctccctccctccctccctccctccctccctccc
tccctccctccccagGTGATGATGTTCTCGGCCACCCTTTCCAAGGAGAT
CCGACCCGTGTGCCGCAAGTTCTGCCAGGCCCCTCTCGAGATTTTTGTGG
ACGACGAGACGAAACTGACCCTCCACGGGCTGCAACAATTTTACATCAAG
CTGGGCCCCGAGGAGAAGAACCGgtgggtgatgaggagggaaggagggga
gggagggagggagggagggagggagggagggagggagggagggagggagg
gagggaaagacttgtttctgttgtatgaaggggatcgaaatgacactcat
tctctctctccactaccccttcttctccctcttctttttcgtgttctcct
cctgctcttcctcctcctcctcctccttctccttctcctcctccccctcc
ttctgctgctgcggcttcttgtcctcgttccttctttctcacagCAAGTT
GAACGAGCTTTTGGACGCCCTCGAGTTCAATCAGGTCGTCATCTTCGTCT
CAAAGgtacgccctccctccctccctccctccctccctctctctctttcc
gtctttcggatcttctttcatgggatcatgctcaccattcctccctccct
ccctccctccctccctctttccctccctccatcattccctagGTTAACCG
TGCTAATGCTTTGAACAAGCTTCTGGTCGACTGCAACTTCCCCTCTATCT
GCATCCACGGTGGCATGAGCATGGACGAACGgtaggtagataggagaggg
agggagggaatggaagaggttgtttgttgttactcgagaaggtaggagga
aaggcgggatggaacgggaggtgcgtccgcttgcccttctctctggattc
ctttctggcagccacaacatgtttcaaagattcaaaaaaacgttagtccc
ttcctgaatcccgtctacccgctcactatcccccccttcctcccttcctc
ccttcctcccttcctcccttcctccctccctcccttcctcccttccctcc
ctcggcagCATCCAGAAGTACAACTCCTTCAAAAACTGGGAAAAGCGCCT
GCTGGTGGCCACGGACCTCTTCGGCCGCGGCATCGACATCCAGCGGGTCA
ATGTCGTGATCAACTACGATTTCCCTACGgtaggtcttgccctccctccc
tccctccctccctccctccctccctccctccctccctccctccctccctc
cctccctccctccctccttccttcctggggattctgatccctccttcctt
ccttcttccggccccatccccgtccacccctccctcgtcccttcctcccc
acattctaagcctttggcaatgccccttccctccttccctccttccctcc
ctcccaccctcccaccctccctccctccctccccatcaaaccttcagGGC
GAGGACGGTTCGGATTCGTACCTCCACCGAGTGGGTCGCGCCGGCCGTTT
CGGCACCAAAGGCCTGGCCATCTCCTTCATCTCTACTCCCGAGGATGCAG
AGCAGCTGGCGGCGGTGCAGTCGCGCTTTGAGgtgaggcgggcgggcggg
agggagggagggaggcagagagggaaggggaggtcggcctgaggataatg
gcactcataagcacggtttcacatgcctccctccttccctccttctcttt
agGTACGTATCCCCGAGCTGCCAGACACGATCGAGACCTCCTTGTACATG
TAGATGGAATGAAGGAGGGAGGGAGGGAGGGAGGAAGAAAGGGAGGAAAC
GAAGAAAGGAGGATGAAAGGATTTTGCCACCCTTCATCCGGGAGGGTAAG
AGGAGGAGGATGAGTTCGATGAGGAGGGAGGGAAGGAGGGCGACACGACG
GAGAGTTGAGGAGCACTTCCATTGAGAATGAATTTAGAAGGTATTCACAA
TCAGGAAGACGAGAAGCGGAGAGTCAGACGCGCGGCCATAACGATAGGAA
GGAGGAGATGACGTCCCCGTGGCCGCCACCACCAGCACAGCCATTGCCAC
CACCACCACTCACCGAGAGAATGTTTGTGTTAATTGCGCGAAAGCGAGGG
AGGGAGGGAGGAAGGCCAAGGGATGGATATTTTGGGGATTGTGCCGTGCG
ATCTCTTCTTTCTCCTTTCCCCCCATAATGTGTTTGTGTCTGTCTGCGTT
CGCACTAGGTCTTGTGTGTGTGTGTGTGACGGGACGTATTTGTGCGATTC
TGTGTCGGTGTCTGTCTCTCGGTGTCTGAGAGTGGGAAGAGAAAGAGAAG
GGAAAAGAGAGAAAAAAAGCAACAAAAGGAAAATGAGTAAAGGAAGGAGA
GAGAAAAAGAGGATTGCAAGGGAGCAGAGGGAAGAGAAGAAGCAGGACAA
GAAGAATCAAAAGAGATAGAAGAATAATGAGCTGTGATGACCTCCTT

protein sequence of NO03G00580.1

>NO03G00580.1-protein ID=NO03G00580.1-protein|Name=NO03G00580.1|organism=Nannochloropsis oceanica|type=polypeptide|length=461bp
MFHPHTFSGTLLPPHAQTLLFSSSSFITSVMADTTTAATNEDELVDYDEE
NEQEEKGAEVGGEEGRKGHYVGVHASGFKDFLLKAELLRALVDCGFEHPS
EVQHECIPQAILGMDIICQAKSGMGKTAVFVLSTLHLLEPKDEECPSVIV
IGHTRELAFQISKEYARFGKYLPQVRVAVFYGGVPIKQNMELLNSDQKPH
IIVGTPGRILELVRKKVLKLDHVKRFVLDECDKLLDALDMRRDIQEIFRA
TPHEKQVMMFSATLSKEIRPVCRKFCQAPLEIFVDDETKLTLHGLQQFYI
KLGPEEKNRKLNELLDALEFNQVVIFVSKVNRANALNKLLVDCNFPSICI
HGGMSMDERIQKYNSFKNWEKRLLVATDLFGRGIDIQRVNVVINYDFPTG
EDGSDSYLHRVGRAGRFGTKGLAISFISTPEDAEQLAAVQSRFEVRIPEL
PDTIETSLYM*

Synonyms

Publications