NO03G00580.1, NO03G00580.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO03G00580.1
Unique Name	NO03G00580.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3271
Alignment location	chr3:186846..192492 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr3	genome	chr3:186846..192492 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO03G00580.1 vs.
Match: XP_002296387.1 (dead box family RNA helicase [Thalassiosira pseudonana CCMP1335]; EED87083.1 dead box family RNA helicase [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 627.1 bits (1616), Expect = 4.300e-176
Identity = 315/432 (72.92%), Postives = 358/432 (82.87%), Query Frame = 0

Query:   38 ATNED-ELVDYDEENEQE----EKGAEVGGEEGRKGHYVGVHASGFKDFLLKAELLRALVDCGFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLSTLHLLEPK----DEECPSVIVIGHTRELAFQISKEYARFGKYLPQVRVAVFYGGVPIKQNMELLNSDQKPHIIVGTPGRILELVRKKVLKLDHVKRFVLDECDKLLDALDMRRDIQEIFRATPHEKQVMMFSATLSKEIRPVCRKFCQAPLEIFVDDETKLTLHGLQQFYIKLGPEEKNRKLNELLDALEFNQVVIFVSKVNRANALNKLLVDCNFPSICIHGGMSMDERIQKYNSFKNWEKRLLVATDLFGRGIDIQRVNVVINYDFPTGEDGSDSYLHRVGRAGRFGTKGLAISFISTPEDAEQLAAVQSRFEVRIPELPDTIETSLYM 461
            A  ED +LVDYDEE E+E    EK A+   +E +KGHYVG+HASGFKDF+LK E LRA+VDCGFEHPSEVQHECIPQA+LGMDI+CQAKSGMGKTAVFVL+TLH L P      E   SV+V+ HTRELAFQI+ EY RF KYLP+V+ AVFYGGV IK N ++L +D  PHI+VGTPGR+L L R+K LKLDH+K FVLDECD++L++LDMRRDIQEIFR TPHEKQVMMFSATLSKEIRPVC+KFCQ P+EI+VDD+TKLTLHGLQ +Y+KL   EKNRKLN+LLDALEFNQVVIFVSKV RAN LN+LL +CNFPSICIH G   DERI KY SFK +  R+LV+TDLFGRGIDI+RVNVVINYDFP   D SD +LHRVGRAGRFGTKGLAISFIS+  D E L  VQSRFEV IPELPD I+ S YM
Sbjct:    4 ANEEDHDLVDYDEEEEEENVVAEKTADGDSKEVKKGHYVGIHASGFKDFILKPECLRAVVDCGFEHPSEVQHECIPQAVLGMDIVCQAKSGMGKTAVFVLATLHQLNPNAFPAGENQVSVLVLCHTRELAFQIAHEYERFSKYLPEVKTAVFYGGVSIKTNRDVLKNDC-PHIVVGTPGRVLGLAREKTLKLDHIKHFVLDECDRILESLDMRRDIQEIFRMTPHEKQVMMFSATLSKEIRPVCKKFCQDPMEIYVDDDTKLTLHGLQLYYVKLAEAEKNRKLNDLLDALEFNQVVIFVSKVARANELNRLLTECNFPSICIHAGQKQDERIAKYKSFKEFNARILVSTDLFGRGIDIERVNVVINYDFP---DDSDQFLHRVGRAGRFGTKGLAISFISSEPDQEILDKVQSRFEVNIPELPDEIDASAYM 431

The following BLAST results are available for this feature:

BLAST of NO03G00580.1 vs.

BLAST of NO03G00580.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
XP_002296387.1	4.300e-176	72.92	dead box family RNA helicase [Thalassiosira pseudo...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO03G00580	NO03G00580	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO03G00580.1	NO03G00580.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO03G00580.1.cds1	NO03G00580.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO03G00580.1.cds2	NO03G00580.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO03G00580.1.cds3	NO03G00580.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO03G00580.1.cds4	NO03G00580.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO03G00580.1.cds5	NO03G00580.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO03G00580.1.cds6	NO03G00580.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO03G00580.1.cds7	NO03G00580.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO03G00580.1.cds8	NO03G00580.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO03G00580.1.cds9	NO03G00580.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO03G00580.1.cds10	NO03G00580.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO03G00580.1.cds11	NO03G00580.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO03G00580.1.cds12	NO03G00580.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr3:186846..192492+
coding sequence from alignment at chr3:186846..192492+

mRNA sequence

>NO03G00580.1 ID=NO03G00580.1|Name=NO03G00580.1|organism=Nannochloropsis oceanica|type=mRNA|length=3271bp
TGTCATATTTGGCACACGCACCTGCACGGAATGAGTGGATGGTTGGTAGG
TATGTGATAGAGAAAGGAGAGGTAAGATGGAAGGCAACGAAGAGAATAAG
CAGAAGTGAAGGGTCGTCGGAATGCGAGGCCTAAACAAGGACCCGAGACC
TCAGCATAGGACCAACATAGGGACTACATTCCCAAGCGTCTTTATGGAGG
GGTGGTGGAGGTTTGTGTGTTTGGATGACATAAGCTAGCTCTAGCTGGGC
TTGTCAAAACTGGGGGCACGTTTCATCAAACTTTCAGGCTGCTCTTCTGC
GGCCACGCGACTTTGCCTGTGATGCTCGGCAGCCACCCAGACCCCATCGC
CACCATTGCGCGCAAGCCTGCAAAACGCAGCATCTCCTTGAACACATTGC
TGTGGCGTACCTGCGTTGTATTTCCGGGTCATGGCACTTGGTGCAGCGGA
TGGCAGAACCCGCGTGGAGACGCCATAGTACTTTGTTCTTTATCTTCCTC
TCGTAGGCTACATCATACACCGTAGCTCCACCATATCCATCATGAGCTAC
CTAGCACCCTCCGAAGCCAGCGCCACGACCATACCTTGGTCTGAGTGGAC
AAGACCAAGACCCGCGGCAGCAGCCAGAGGAAACAGGTTAGGAGGGTGGA
TGGCTAGGCTCTGCATCACCTTCTTCTTCTCCTCCTTCTTCGCCGCACCA
GACCTCGCACAATAAGATGCTGCCAGCAGCAACGACGACGACAAACATCA
GCAGCATCAACGGGGGCAGCACAACAGCAGTGTGGTGGCGGCGGTGCTGG
AGGTAGATTAGGACCGGATAGTCATGCGTGGCCATGACAGAACAAAATCT
AGAGGCGGCGACAGGAGAGAGACTCCTCCGTCTGCTCCCCACCTTCCCCA
ATTTCATTCACCTTAAGAACATATGACCCCTGTCTCCATGCGTCTAGACG
GGATTTGTTAGTACGCATGTCTCTCTTTGCTCCCTTTGCATCTCTTTTCC
CACATCACCACCTTACCGCGACGGACGGCCTCCGAAGAAGTTGCAAACCG
ATGACCACCACAACAAGGTGCGGCGGCGGCGGCGCCTCGCTCCGTAGTAG
AGTGCGTCGCCCGCAGGCACACAGACCCAAGCCGCGGCCATAGCCCTGCT
GGCCTGCCCCCACCACCTCCAGCCTGCACAGCTGACCCCAACCCATGTTC
CATCCACACACATTTTCCGGTACTCTACTACCACCCCACGCGCAGACACT
TCTTTTTTCTTCTTCCAGTTTCATCACCAGCGTTATGGCGGACACGACGA
CGGCAGCGACCAACGAGGATGAGCTTGTGGACTACGACGAGGAGAATGAG
CAGGAGGAGAAGGGAGCCGAGGTCGGGGGGGAGGAAGGGCGCAAAGGCCA
CTACGTCGGCGTGCATGCGTCGGGTTTCAAGGATTTTCTCTTGAAGGCGG
AGTTGCTCCGCGCCTTGGTTGACTGCGGTTTCGAACACCCTTCCGAAGTG
CAACACGAGTGCATCCCGCAGGCCATCCTGGGCATGGACATCATCTGCCA
AGCCAAGTCGGGCATGGGCAAGACGGCCGTCTTCGTCCTCTCCACGCTCC
ACCTCCTCGAGCCCAAAGACGAGGAGTGTCCGTCGGTGATCGTCATCGGC
CACACGCGCGAGCTGGCCTTCCAGATCTCCAAGGAATACGCCCGCTTCGG
GAAATACTTGCCGCAGGTCCGCGTAGCTGTGTTCTACGGCGGCGTGCCCA
TCAAGCAGAACATGGAGCTGTTGAACAGCGACCAGAAGCCTCACATCATC
GTGGGGACGCCCGGCCGCATCCTTGAGCTGGTCCGCAAGAAGGTCCTCAA
GCTCGACCATGTGAAGCGCTTCGTCCTCGACGAATGCGACAAGCTCCTGG
ACGCCCTCGACATGCGCCGTGATATTCAAGAGATTTTTCGCGCCACGCCC
CATGAGAAGCAGGTGATGATGTTCTCGGCCACCCTTTCCAAGGAGATCCG
ACCCGTGTGCCGCAAGTTCTGCCAGGCCCCTCTCGAGATTTTTGTGGACG
ACGAGACGAAACTGACCCTCCACGGGCTGCAACAATTTTACATCAAGCTG
GGCCCCGAGGAGAAGAACCGCAAGTTGAACGAGCTTTTGGACGCCCTCGA
GTTCAATCAGGTCGTCATCTTCGTCTCAAAGGTTAACCGTGCTAATGCTT
TGAACAAGCTTCTGGTCGACTGCAACTTCCCCTCTATCTGCATCCACGGT
GGCATGAGCATGGACGAACGCATCCAGAAGTACAACTCCTTCAAAAACTG
GGAAAAGCGCCTGCTGGTGGCCACGGACCTCTTCGGCCGCGGCATCGACA
TCCAGCGGGTCAATGTCGTGATCAACTACGATTTCCCTACGGGCGAGGAC
GGTTCGGATTCGTACCTCCACCGAGTGGGTCGCGCCGGCCGTTTCGGCAC
CAAAGGCCTGGCCATCTCCTTCATCTCTACTCCCGAGGATGCAGAGCAGC
TGGCGGCGGTGCAGTCGCGCTTTGAGGTACGTATCCCCGAGCTGCCAGAC
ACGATCGAGACCTCCTTGTACATGTAGATGGAATGAAGGAGGGAGGGAGG
GAGGGAGGAAGAAAGGGAGGAAACGAAGAAAGGAGGATGAAAGGATTTTG
CCACCCTTCATCCGGGAGGGTAAGAGGAGGAGGATGAGTTCGATGAGGAG
GGAGGGAAGGAGGGCGACACGACGGAGAGTTGAGGAGCACTTCCATTGAG
AATGAATTTAGAAGGTATTCACAATCAGGAAGACGAGAAGCGGAGAGTCA
GACGCGCGGCCATAACGATAGGAAGGAGGAGATGACGTCCCCGTGGCCGC
CACCACCAGCACAGCCATTGCCACCACCACCACTCACCGAGAGAATGTTT
GTGTTAATTGCGCGAAAGCGAGGGAGGGAGGGAGGAAGGCCAAGGGATGG
ATATTTTGGGGATTGTGCCGTGCGATCTCTTCTTTCTCCTTTCCCCCCAT
AATGTGTTTGTGTCTGTCTGCGTTCGCACTAGGTCTTGTGTGTGTGTGTG
TGACGGGACGTATTTGTGCGATTCTGTGTCGGTGTCTGTCTCTCGGTGTC
TGAGAGTGGGAAGAGAAAGAGAAGGGAAAAGAGAGAAAAAAAGCAACAAA
AGGAAAATGAGTAAAGGAAGGAGAGAGAAAAAGAGGATTGCAAGGGAGCA
GAGGGAAGAGAAGAAGCAGGACAAGAAGAATCAAAAGAGATAGAAGAATA
ATGAGCTGTGATGACCTCCTT

protein sequence of NO03G00580.1

>NO03G00580.1-protein ID=NO03G00580.1-protein|Name=NO03G00580.1|organism=Nannochloropsis oceanica|type=polypeptide|length=461bp
MFHPHTFSGTLLPPHAQTLLFSSSSFITSVMADTTTAATNEDELVDYDEE
NEQEEKGAEVGGEEGRKGHYVGVHASGFKDFLLKAELLRALVDCGFEHPS
EVQHECIPQAILGMDIICQAKSGMGKTAVFVLSTLHLLEPKDEECPSVIV
IGHTRELAFQISKEYARFGKYLPQVRVAVFYGGVPIKQNMELLNSDQKPH
IIVGTPGRILELVRKKVLKLDHVKRFVLDECDKLLDALDMRRDIQEIFRA
TPHEKQVMMFSATLSKEIRPVCRKFCQAPLEIFVDDETKLTLHGLQQFYI
KLGPEEKNRKLNELLDALEFNQVVIFVSKVNRANALNKLLVDCNFPSICI
HGGMSMDERIQKYNSFKNWEKRLLVATDLFGRGIDIQRVNVVINYDFPTG
EDGSDSYLHRVGRAGRFGTKGLAISFISTPEDAEQLAAVQSRFEVRIPEL
PDTIETSLYM*

mRNA from alignment at chr3:186846..192492+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO03G00580.1 ID=NO03G00580.1|Name=NO03G00580.1|organism=Nannochloropsis oceanica|type=mRNA|length=5647bp|location=Sequence derived from alignment at chr3:186846..192492+ (Nannochloropsis oceanica)
TGTCATATTTGGCACACGCACCTGCACGGAATGAGTGGATGGTTGGTAGG
TATGTGATAGAGAAAGGAGAGGTAAGATGGAAGGCAACGAAGAGAATAAG
CAGAAGTGAAGGGTCGTCGGAATGCGAGGCCTAAACAAGGACCCGAGACC
TCAGCATAGGACCAACATAGGGACTACATTCCCAAGCGTCTTTATGGAGG
GGTGGTGGAGGTTTGTGTGTTTGGATGACATAAGCTAGCTCTAGCTGGGC
TTGTCAAAACTGGGGGCACGTTTCATCAAACTTTCAGGCTGCTCTTCTGC
GGCCACGCGACTTTGCCTGTGATGCTCGGCAGCCACCCAGACCCCATCGC
CACCATTGCGCGCAAGCCTGCAAAACGCAGCATCTCCTTGAACACATTGC
TGTGGCGTACCTGCGTTGTATTTCCGGGTCATGGCACTTGGTGCAGCGGA
TGGCAGAACCCGCGTGGAGACGCCATAGTACTTTGTTCTTTATCTTCCTC
TCGTAGGCTACATCATACACCGTAGCTCCACCATATCCATCATGAGCTAC
CTAGCACCCTCCGAAGCCAGCGCCACGACCATACCTTGGTCTGAGTGGAC
AAGACCAAGACCCGCGGCAGCAGCCAGAGGAAACAGGTTAGGAGGGTGGA
TGGCTAGGCTCTGCATCACCTTCTTCTTCTCCTCCTTCTTCGCCGCACCA
GACCTCGCACAATAAGATGCTGCCAGCAGCAACGACGACGACAAACATCA
GCAGCATCAACGGGGGCAGCACAACAGCAGTGTGGTGGCGGCGGTGCTGG
AGGTAGATTAGGACCGGATAGTCATGCGTGGCCATGACAGAACAAAATCT
AGAGGCGGCGACAGGAGAGAGACTCCTCCGTCTGCTCCCCACCTTCCCCA
ATTTCATTCACCTTAAGAACATATGACCCCTGTCTCCATGCGTCTAGACG
GGATTTGTTAGTACGCATGTCTCTCTTTGCTCCCTTTGCATCTCTTTTCC
CACATCACCACCTTACCGCGACGGACGGCCTCCGAAGAAGTTGCAAACCG
ATGACCACCACAACAAGGTGCGGCGGCGGCGGCGCCTCGCTCCGTAGTAG
AGTGCGTCGCCCGCAGGCACACAGACCCAAGCCGCGGCCATAGCCCTGCT
GGCCTGCCCCCACCACCTCCAGCCTGCACAGCTGACCCCAACCCATGTTC
CATCCACACACATTTTCCGGTACTCTACTACCACCCCACGCGCAGACACT
TCTTTTTTCTTCTTCCAGTTTCATCACCAGCGTTATGGCGGACACGACGA
CGGCAGCGACCAACGAGGATGAGCTTGTGGACTACGACGAGGAGAATGAG
CAGGAGGAGAAGGTGCGTGGTTAGGTGGGGGAGGGAGGGAGGGAGGAAGG
GAGGGAGGGAGGGAGGAGAAAACGATGGAGGAGGCAGAGACTGAGATAGA
CTCCTGCAAAGAGCGCACATCAAAGACTCAGAGTAGGAAGAGAGGAGGAG
GACGGTCTTCACCGGGAGGGGAATGAGTTTGGGGCTCGCTGTGTTATCTA
CTCACCTCACACCTCCATCCCCTTGATGTTAATCCCCCTCCTCTCTTGTC
ATCGCTTAACCCTCCATCAGGGAGCCGAGGTCGGGGGGGAGGAAGGGCGC
AAAGGCCACTACGTCGGCGTGCATGCGTCGGGTTTCAAGGATTTTCTCTT
GAAGGCGGAGTTGCTCCGCGCCTTGGTTGACTGCGGTTTCGAACACCCTT
CCGAAGGTATGACGACATGCATACTACATGACTATTATGACGAGGACGAC
GACCATATGGCGATGATGATGACTTGGACTTATTGAGAGGAGGGGGGGAT
AAAAAAATTCTGGAGGGAGGGAAGGAGAGAGAGGGAGGGAGGAAGGGGAA
GAGGGAACGGGATGGAGGAACGCCCTCGAGAAAACTATGACTTATGAGTC
TCTTCCTTTTCCCCCTTCTCTCCTTCCCTCCCTCCCTCCCTCCCTCGCTC
AGTGCAACACGAGTGCATCCCGCAGGCCATCCTGGGCATGGACATCATCT
GCCAAGCCAAGTCGGGCATGGGCAAGACGGCCGTCTTCGTCCTCTCCACG
CTCCACCTCCTCGAGCCCAAAGTATGGATGACTCAGGAGGGAGGGAGGGA
GGGAGGGAGGGAAGGAGGGAGGGAGGGAAGGGGGGAAGGAGGGAGGGAGG
GAAGGGGGGAAGGAGGGAGGGAGGGAAGGGGGGAAGGAGGGAGGGAGGGG
GGACGGACGGAAAGCCGAAAACACCCTTTTCCTTGCGCATCAACCTCTCA
GACTCCCCCCCCCCCTCCTCCTTCCCTCCTTCCCTTCCTTCCTTCTTGTT
CCCAGGACGAGGAGTGTCCGTCGGTGATCGTCATCGGCCACACGCGCGAG
CTGGCCTTCCAGATCTCCAAGGAATACGCCCGCTTCGGGAAATACTTGCC
GCAGGTCCGTCTGGCCCCTCCCTCCCTCCCTCCCTCATTCCCTCTCTCCC
TCCCTCCCTCCCTCCCTCCCTCCTTTCCCCCCCTCGCCTGCGGTGTTTCT
TTGCACCCATTTGTCTTCCCTGACAGACTATCTCGCCCCTCACCTGTGAT
CCCTCCCTCTCTCCCTCCCTCCCTCCCTCCCTTCCTCTCTCCCAGGTCCG
CGTAGCTGTGTTCTACGGCGGCGTGCCCATCAAGCAGAACATGGAGCTGT
TGAACAGCGACCAGAAGCCTCACATCATCGTGGGGACGCCCGGCCGCATC
CTTGAGCTGGTCCGCAAGAAGGTGTGTGTGACGTCTTTCCCTCCCTTTTT
CCCTCCCTCCCTCCCTCCTTTCCTCCCTTTCCCTCTCTCTTTTTTTTCTC
CTCCCTCCCTCCCTCCCTCCCTTCAATCTTTGCTCGGGTAGTGCAAGCAG
CCACATGCCGCTCAACCCTCCCCCCGCCTGTCCCTCCCTCCTTCAGGTCC
TCAAGCTCGACCATGTGAAGCGCTTCGTCCTCGACGAATGCGACAAGCTC
CTGGACGCCCTCGACATGCGCCGTGATATTCAAGAGATTTTTCGCGCCAC
GCCCCATGAGAAGCAGGTAGACACCCTCCCTCCCTCCCACCCACTCTTCA
ACTCTCCTCCCCTCCCTCCCTCCCTCCTTCCGTCCCTCCCTCCCTCTCCT
TCCCCCCCTCTCGGCCCCTTTCCGTCAGATAAGCATCTCCCCTGCTGCTT
CGGTCGAAACTCACCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCCTCCCCAGGTGATGATGTTCTCGGCCACCCTTTCCAAGGAGAT
CCGACCCGTGTGCCGCAAGTTCTGCCAGGCCCCTCTCGAGATTTTTGTGG
ACGACGAGACGAAACTGACCCTCCACGGGCTGCAACAATTTTACATCAAG
CTGGGCCCCGAGGAGAAGAACCGGTGGGTGATGAGGAGGGAAGGAGGGGA
GGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG
GAGGGAAAGACTTGTTTCTGTTGTATGAAGGGGATCGAAATGACACTCAT
TCTCTCTCTCCACTACCCCTTCTTCTCCCTCTTCTTTTTCGTGTTCTCCT
CCTGCTCTTCCTCCTCCTCCTCCTCCTTCTCCTTCTCCTCCTCCCCCTCC
TTCTGCTGCTGCGGCTTCTTGTCCTCGTTCCTTCTTTCTCACAGCAAGTT
GAACGAGCTTTTGGACGCCCTCGAGTTCAATCAGGTCGTCATCTTCGTCT
CAAAGGTACGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCTCTCTCTTTCC
GTCTTTCGGATCTTCTTTCATGGGATCATGCTCACCATTCCTCCCTCCCT
CCCTCCCTCCCTCCCTCTTTCCCTCCCTCCATCATTCCCTAGGTTAACCG
TGCTAATGCTTTGAACAAGCTTCTGGTCGACTGCAACTTCCCCTCTATCT
GCATCCACGGTGGCATGAGCATGGACGAACGGTAGGTAGATAGGAGAGGG
AGGGAGGGAATGGAAGAGGTTGTTTGTTGTTACTCGAGAAGGTAGGAGGA
AAGGCGGGATGGAACGGGAGGTGCGTCCGCTTGCCCTTCTCTCTGGATTC
CTTTCTGGCAGCCACAACATGTTTCAAAGATTCAAAAAAACGTTAGTCCC
TTCCTGAATCCCGTCTACCCGCTCACTATCCCCCCCTTCCTCCCTTCCTC
CCTTCCTCCCTTCCTCCCTTCCTCCCTCCCTCCCTTCCTCCCTTCCCTCC
CTCGGCAGCATCCAGAAGTACAACTCCTTCAAAAACTGGGAAAAGCGCCT
GCTGGTGGCCACGGACCTCTTCGGCCGCGGCATCGACATCCAGCGGGTCA
ATGTCGTGATCAACTACGATTTCCCTACGGTAGGTCTTGCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCTTCCTTCCTGGGGATTCTGATCCCTCCTTCCTT
CCTTCTTCCGGCCCCATCCCCGTCCACCCCTCCCTCGTCCCTTCCTCCCC
ACATTCTAAGCCTTTGGCAATGCCCCTTCCCTCCTTCCCTCCTTCCCTCC
CTCCCACCCTCCCACCCTCCCTCCCTCCCTCCCCATCAAACCTTCAGGGC
GAGGACGGTTCGGATTCGTACCTCCACCGAGTGGGTCGCGCCGGCCGTTT
CGGCACCAAAGGCCTGGCCATCTCCTTCATCTCTACTCCCGAGGATGCAG
AGCAGCTGGCGGCGGTGCAGTCGCGCTTTGAGGTGAGGCGGGCGGGCGGG
AGGGAGGGAGGGAGGCAGAGAGGGAAGGGGAGGTCGGCCTGAGGATAATG
GCACTCATAAGCACGGTTTCACATGCCTCCCTCCTTCCCTCCTTCTCTTT
AGGTACGTATCCCCGAGCTGCCAGACACGATCGAGACCTCCTTGTACATG
TAGATGGAATGAAGGAGGGAGGGAGGGAGGGAGGAAGAAAGGGAGGAAAC
GAAGAAAGGAGGATGAAAGGATTTTGCCACCCTTCATCCGGGAGGGTAAG
AGGAGGAGGATGAGTTCGATGAGGAGGGAGGGAAGGAGGGCGACACGACG
GAGAGTTGAGGAGCACTTCCATTGAGAATGAATTTAGAAGGTATTCACAA
TCAGGAAGACGAGAAGCGGAGAGTCAGACGCGCGGCCATAACGATAGGAA
GGAGGAGATGACGTCCCCGTGGCCGCCACCACCAGCACAGCCATTGCCAC
CACCACCACTCACCGAGAGAATGTTTGTGTTAATTGCGCGAAAGCGAGGG
AGGGAGGGAGGAAGGCCAAGGGATGGATATTTTGGGGATTGTGCCGTGCG
ATCTCTTCTTTCTCCTTTCCCCCCATAATGTGTTTGTGTCTGTCTGCGTT
CGCACTAGGTCTTGTGTGTGTGTGTGTGACGGGACGTATTTGTGCGATTC
TGTGTCGGTGTCTGTCTCTCGGTGTCTGAGAGTGGGAAGAGAAAGAGAAG
GGAAAAGAGAGAAAAAAAGCAACAAAAGGAAAATGAGTAAAGGAAGGAGA
GAGAAAAAGAGGATTGCAAGGGAGCAGAGGGAAGAGAAGAAGCAGGACAA
GAAGAATCAAAAGAGATAGAAGAATAATGAGCTGTGATGACCTCCTT

Coding sequence (CDS) from alignment at chr3:186846..192492+

>NO03G00580.1 ID=NO03G00580.1|Name=NO03G00580.1|organism=Nannochloropsis oceanica|type=CDS|length=1383bp|location=Sequence derived from alignment at chr3:186846..192492+ (Nannochloropsis oceanica)
ATGTTCCATCCACACACATTTTCCGGTACTCTACTACCACCCCACGCGCA
GACACTTCTTTTTTCTTCTTCCAGTTTCATCACCAGCGTTATGGCGGACA
CGACGACGGCAGCGACCAACGAGGATGAGCTTGTGGACTACGACGAGGAG
AATGAGCAGGAGGAGAAGGGAGCCGAGGTCGGGGGGGAGGAAGGGCGCAA
AGGCCACTACGTCGGCGTGCATGCGTCGGGTTTCAAGGATTTTCTCTTGA
AGGCGGAGTTGCTCCGCGCCTTGGTTGACTGCGGTTTCGAACACCCTTCC
GAAGTGCAACACGAGTGCATCCCGCAGGCCATCCTGGGCATGGACATCAT
CTGCCAAGCCAAGTCGGGCATGGGCAAGACGGCCGTCTTCGTCCTCTCCA
CGCTCCACCTCCTCGAGCCCAAAGACGAGGAGTGTCCGTCGGTGATCGTC
ATCGGCCACACGCGCGAGCTGGCCTTCCAGATCTCCAAGGAATACGCCCG
CTTCGGGAAATACTTGCCGCAGGTCCGCGTAGCTGTGTTCTACGGCGGCG
TGCCCATCAAGCAGAACATGGAGCTGTTGAACAGCGACCAGAAGCCTCAC
ATCATCGTGGGGACGCCCGGCCGCATCCTTGAGCTGGTCCGCAAGAAGGT
CCTCAAGCTCGACCATGTGAAGCGCTTCGTCCTCGACGAATGCGACAAGC
TCCTGGACGCCCTCGACATGCGCCGTGATATTCAAGAGATTTTTCGCGCC
ACGCCCCATGAGAAGCAGGTGATGATGTTCTCGGCCACCCTTTCCAAGGA
GATCCGACCCGTGTGCCGCAAGTTCTGCCAGGCCCCTCTCGAGATTTTTG
TGGACGACGAGACGAAACTGACCCTCCACGGGCTGCAACAATTTTACATC
AAGCTGGGCCCCGAGGAGAAGAACCGCAAGTTGAACGAGCTTTTGGACGC
CCTCGAGTTCAATCAGGTCGTCATCTTCGTCTCAAAGGTTAACCGTGCTA
ATGCTTTGAACAAGCTTCTGGTCGACTGCAACTTCCCCTCTATCTGCATC
CACGGTGGCATGAGCATGGACGAACGCATCCAGAAGTACAACTCCTTCAA
AAACTGGGAAAAGCGCCTGCTGGTGGCCACGGACCTCTTCGGCCGCGGCA
TCGACATCCAGCGGGTCAATGTCGTGATCAACTACGATTTCCCTACGGGC
GAGGACGGTTCGGATTCGTACCTCCACCGAGTGGGTCGCGCCGGCCGTTT
CGGCACCAAAGGCCTGGCCATCTCCTTCATCTCTACTCCCGAGGATGCAG
AGCAGCTGGCGGCGGTGCAGTCGCGCTTTGAGGTACGTATCCCCGAGCTG
CCAGACACGATCGAGACCTCCTTGTACATGTAG

Synonyms

Publications