NO03G00240, NO03G00240 (gene) Nannochloropsis oceanica

Overview
NameNO03G00240
Unique NameNO03G00240
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1384
Alignment locationchr3:73556..74939 -

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:73556..74939 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006468protein phosphorylation
GO:0006464cellular protein modification process
Vocabulary: Molecular Function
TermDefinition
GO:0005516calmodulin binding
GO:0004683calmodulin-dependent protein kinase activity
GO:0016301kinase activity
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR032710NTF2-like_dom_sf
IPR013543Ca/CaM-dep_prot_kinase-assoc
Homology
[Close]
BLAST of NO03G00240 vs. NCBI_GenBank
Match: XP_005854563.1 (putative protein conserved in bacteria with a cystatin-like fold containing protein [Nannochloropsis gaditana CCMP526] >XP_005854721.1 putative protein conserved in bacteria with a cystatin-like fold containing protein [Nannochloropsis gaditana CCMP526] >EKU21634.1 putative protein conserved in bacteria with a cystatin-like fold containing protein [Nannochloropsis gaditana CCMP526] >EKU21794.1 putative protein conserved in bacteria with a cystatin-like fold containing protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 310.1 bits (793), Expect = 4.900e-81
Identity = 160/190 (84.21%), Postives = 171/190 (90.00%), Query Frame = 0 
Query:    1 MILAKSFATQSLRHQATATAAKKLASVQLFSTVRETLPHHPSDKAAIAEVAATTEKWLKTVTGQKPTSPAETAALYANDGVLWATVSTELRVNPKEIRDYFDVFARLPNLTVTDYKPFIRMYGDIALNDGYYTVHFDSPDGKKVTTKARYVFVYKRNESSGAWEIIDHHSSAMPVAPAGLKTATTVAPPS 191
            M+LAKS ATQSLR QA+ T AKK   V L STVRET+P  PS K  +AEVAATTEKWL+TVTGQKPTSPAETAALYA DGVLWATVSTELRVNPKEIRDYFDVFARLPNL V+DYKP+IR+YGDIALNDGYYTV FDSP+GKKV TKARYVFVYKR+E+SGAWEIIDHHSSAMPVAPAGLK ATTVAPPS
Sbjct:    1 MLLAKSLATQSLRLQASIT-AKKAFPVHLLSTVRETIPSRPSHKQVVAEVAATTEKWLETVTGQKPTSPAETAALYAKDGVLWATVSTELRVNPKEIRDYFDVFARLPNLKVSDYKPYIRVYGDIALNDGYYTVTFDSPEGKKV-TKARYVFVYKRDEASGAWEIIDHHSSAMPVAPAGLKKATTVAPPS 188
[Close]
BLAST of NO03G00240 vs. NCBI_GenBank
Match: EWM29571.1 (uncharacterized protein Naga_100006g11 [Nannochloropsis gaditana])

HSP 1 Score: 310.1 bits (793), Expect = 4.900e-81
Identity = 160/190 (84.21%), Postives = 171/190 (90.00%), Query Frame = 0 
Query:    1 MILAKSFATQSLRHQATATAAKKLASVQLFSTVRETLPHHPSDKAAIAEVAATTEKWLKTVTGQKPTSPAETAALYANDGVLWATVSTELRVNPKEIRDYFDVFARLPNLTVTDYKPFIRMYGDIALNDGYYTVHFDSPDGKKVTTKARYVFVYKRNESSGAWEIIDHHSSAMPVAPAGLKTATTVAPPS 191
            M+LAKS ATQSLR QA+ T AKK   V L STVRET+P  PS K  +AEVAATTEKWL+TVTGQKPTSPAETAALYA DGVLWATVSTELRVNPKEIRDYFDVFARLPNL V+DYKP+IR+YGDIALNDGYYTV FDSP+GKKV TKARYVFVYKR+E+SGAWEIIDHHSSAMPVAPAGLK ATTVAPPS
Sbjct:  371 MLLAKSLATQSLRLQASIT-AKKAFPVHLLSTVRETIPSRPSHKQVVAEVAATTEKWLETVTGQKPTSPAETAALYAKDGVLWATVSTELRVNPKEIRDYFDVFARLPNLKVSDYKPYIRVYGDIALNDGYYTVTFDSPEGKKV-TKARYVFVYKRDEASGAWEIIDHHSSAMPVAPAGLKKATTVAPPS 558
[Close]
BLAST of NO03G00240 vs. NCBI_GenBank
Match: EWM24920.1 (uncharacterized protein Naga_100092g2 [Nannochloropsis gaditana])

HSP 1 Score: 166.8 bits (421), Expect = 6.700e-38
Identity = 82/149 (55.03%), Postives = 103/149 (69.13%), Query Frame = 0 
Query:   43 DKAAIAEVAATTEKWLKTVTGQKPTSPAETAALYANDGVLWATVSTELRVNPKEIRDYFDVFARLPNLTVTDYKPFIRMY-----GDIALNDGYYTVHFDSPDGKKVTTKARYVFVYKRNESSGAWEIIDHHSSAMPVAPAGLKTATTV 187
            D+    EV  TT++WL+TVT  + T+ AETAALYA+D VLW TVS ELRVNP EIR YFD FA LP L V  Y+P++R++     G+ A+NDGYY   +  PDG++V   ARY FVY++    G W I+DHHSS +P APAGL  ATTV
Sbjct:   38 DERVKQEVLQTTQEWLQTVTSNRATASAETAALYASDAVLWGTVSEELRVNPAEIRSYFDFFAALPGLRVAAYQPYVRIFGTGNEGETAINDGYYVFAWRGPDGREVQKHARYSFVYRK--EGGKWMIVDHHSSLLPTAPAGLAKATTV 184
[Close]
BLAST of NO03G00240 vs. NCBI_GenBank
Match: EWM24921.1 (uncharacterized protein Naga_100092g2 [Nannochloropsis gaditana])

HSP 1 Score: 166.8 bits (421), Expect = 6.700e-38
Identity = 82/149 (55.03%), Postives = 103/149 (69.13%), Query Frame = 0 
Query:   43 DKAAIAEVAATTEKWLKTVTGQKPTSPAETAALYANDGVLWATVSTELRVNPKEIRDYFDVFARLPNLTVTDYKPFIRMY-----GDIALNDGYYTVHFDSPDGKKVTTKARYVFVYKRNESSGAWEIIDHHSSAMPVAPAGLKTATTV 187
            D+    EV  TT++WL+TVT  + T+ AETAALYA+D VLW TVS ELRVNP EIR YFD FA LP L V  Y+P++R++     G+ A+NDGYY   +  PDG++V   ARY FVY++    G W I+DHHSS +P APAGL  ATTV
Sbjct:  182 DERVKQEVLQTTQEWLQTVTSNRATASAETAALYASDAVLWGTVSEELRVNPAEIRSYFDFFAALPGLRVAAYQPYVRIFGTGNEGETAINDGYYVFAWRGPDGREVQKHARYSFVYRK--EGGKWMIVDHHSSLLPTAPAGLAKATTV 328
[Close]
BLAST of NO03G00240 vs. NCBI_GenBank
Match: XP_005854298.1 (putative protein conserved in bacteria with a cystatin-like fold containing protein [Nannochloropsis gaditana CCMP526] >XP_005855250.1 putative protein conserved in bacteria with a cystatin-like fold containing protein [Nannochloropsis gaditana CCMP526] >EKU21107.1 putative protein conserved in bacteria with a cystatin-like fold containing protein [Nannochloropsis gaditana CCMP526] >EKU22059.1 putative protein conserved in bacteria with a cystatin-like fold containing protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 166.0 bits (419), Expect = 1.100e-37
Identity = 82/149 (55.03%), Postives = 102/149 (68.46%), Query Frame = 0 
Query:   43 DKAAIAEVAATTEKWLKTVTGQKPTSPAETAALYANDGVLWATVSTELRVNPKEIRDYFDVFARLPNLTVTDYKPFIRMY-----GDIALNDGYYTVHFDSPDGKKVTTKARYVFVYKRNESSGAWEIIDHHSSAMPVAPAGLKTATTV 187
            D+    EV  TT+KWL+TVT  + T+ AETAALYA+D VLW TVS ELRVNP EIR YFD FA LP L V  Y+P++R++     G+ A+NDGYY   +  PDG++V   ARY FVY++      W I+DHHSS +P APAGL  ATTV
Sbjct:   38 DERVKQEVLQTTQKWLQTVTSNRATASAETAALYASDAVLWGTVSEELRVNPAEIRSYFDFFAALPGLRVAAYQPYVRIFGTGNEGETAINDGYYVFAWRGPDGREVQKHARYSFVYRKEGEK--WMIVDHHSSLLPTAPAGLAKATTV 184
[Close]
BLAST of NO03G00240 vs. NCBI_GenBank
Match: CBJ26233.1 (similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold [Ectocarpus siliculosus])

HSP 1 Score: 141.0 bits (354), Expect = 3.900e-30
Identity = 75/156 (48.08%), Postives = 97/156 (62.18%), Query Frame = 0 
Query:   37 LPHHPSDKAAIAEVAATTEKWLKTVTGQKPTSPAETAALYANDGVLWATVSTELRVNPKEIRDYFDVFARLPNLTVTDYKPF-IRMYGDIALNDGYYTVHFDSPDGKKVTTKARYVFVYKRNE--SSGAWEIIDHHSSAMPVAPAGLKTATTVAPP 190
            +P    D+ A+A+   TT  W +TVT     +P +TAALYA DGVLW TVS E+R  P++I  YFD FARLP L V +Y P  +R+YGD A+  G YT  F  PDG  V  +AR+ F ++R+   S   W I++HHSS+MP APAGLK     A P
Sbjct:  157 VPTPEEDRKAVAD---TTLVWKETVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAFQGPDGVTVEKRARFSFTFRRDNPGSPRPWTIVEHHSSSMPTAPAGLKRVGQEAVP 309
[Close]
BLAST of NO03G00240 vs. NCBI_GenBank
Match: CBJ26228.1 (similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold [Ectocarpus siliculosus])

HSP 1 Score: 137.1 bits (344), Expect = 5.600e-29
Identity = 70/135 (51.85%), Postives = 88/135 (65.19%), Query Frame = 0 
Query:   50 VAATTEKWLKTVTGQKPTSPAETAALYANDGVLWATVSTELRVNPKEIRDYFDVFARLPNLTVTDYKPF-IRMYGDIALNDGYYTVHFDSPDGKKVTTKARYVFVYKRNE--SSGAWEIIDHHSSAMPVAPAGLK 182
            VA TT  W +TVT     +P +TAALYA DGVLW TVS E+R  P++I  YFD FARLP L V +Y P  +R+YGD A+  G YT  F   DG  V  +AR+ F ++R+   S   W I++HHSS+MP APAGLK
Sbjct:  132 VADTTLVWKETVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAIQAGTYTFAFQGADGATVEKRARFSFTFRRDRPGSPQPWTIVEHHSSSMPTAPAGLK 266
[Close]
BLAST of NO03G00240 vs. NCBI_GenBank
Match: WP_036487251.1 (DUF4440 domain-containing protein [Myxosarcina sp. GI1])

HSP 1 Score: 136.7 bits (343), Expect = 7.400e-29
Identity = 72/134 (53.73%), Postives = 89/134 (66.42%), Query Frame = 0 
Query:   49 EVAATTEKWLKTVTGQKPTSPAETAALYANDGVLWATVSTELRVNPKEIRDYFDVFARLPNLTVTDYKPFIRMYG-DIALNDGYYTVHFDSPDGKKVTTKARYVFVYKRNESSGAWEIIDHHSSAMPVAPAGLK 182
            EVA TT+ WL TVT        E  ALYA DGVLW TVS ++R  P EI DYF+ FARLP L+V+ YK  +RMY  D+A+N GYYT  F S +G+     ARY FVY++N  +  WEII+HHSSA+P AP  L+
Sbjct:   50 EVAETTDTWLNTVTSGSEGVVDEVVALYAEDGVLWGTVSEQVRDTPAEIGDYFEFFARLPELSVSSYKGCVRMYDEDLAINSGYYTFTF-SENGQTKEVPARYSFVYQKN-GNNQWEIIEHHSSALPEAPETLE 181
[Close]
BLAST of NO03G00240 vs. NCBI_GenBank
Match: WP_019506721.1 (DUF4440 domain-containing protein [Pleurocapsa sp. PCC 7319])

HSP 1 Score: 135.6 bits (340), Expect = 1.600e-28
Identity = 72/143 (50.35%), Postives = 93/143 (65.03%), Query Frame = 0 
Query:   44 KAAIAEVAATTEKWLKTVTGQKPTSPAETAALYANDGVLWATVSTELRVNPKEIRDYFDVFARLPNLTVTDYKPFIRMYGD-IALNDGYYTVHFDSPDGKKVTTKARYVFVYKRNESSGAWEIIDHHSSAMPVAPAGLKTATT 186
            K A  EVA +T+ WL TVT        E  ALYA DGVLW TVS ++R  P EI DYF+ FA+LP L+V+ YK  +R+Y + +A+N GYYT  + S DG+     ARY FVY +  S+  WEII+HHSSA+P AP  L+T +T
Sbjct:   53 KKAEKEVAQSTDIWLDTVTSGSEEVVDEVVALYAEDGVLWGTVSEQVRSTPVEISDYFEYFAKLPELSVSSYKGCVRVYDENVAINTGYYTFTY-SKDGQTKVVPARYSFVYHKG-SNNQWEIIEHHSSALPEAPETLETVST 193
[Close]
BLAST of NO03G00240 vs. NCBI_GenBank
Match: WP_021834240.1 (DUF4440 domain-containing protein [Crocosphaera watsonii] >CCQ59796.1 hypothetical protein CWATWH0401_2416 [Crocosphaera watsonii WH 0401] >CCQ59465.1 hypothetical protein CWATWH0005_2445 [Crocosphaera watsonii WH 0005] >CCQ65175.1 hypothetical protein CWATWH0402_4543 [Crocosphaera watsonii WH 0402])

HSP 1 Score: 135.6 bits (340), Expect = 1.600e-28
Identity = 69/133 (51.88%), Postives = 88/133 (66.17%), Query Frame = 0 
Query:   49 EVAATTEKWLKTVTGQKPTSPAETAALYANDGVLWATVSTELRVNPKEIRDYFDVFARLPNLTVTDYKPFIRMYGD-IALNDGYYTVHFDSPDGKKVTTKARYVFVYKRNESSGAWEIIDHHSSAMPVAPAGL 181
            EVA TT+ WL TVT        E  ALY  DG+LW TVS ++R NP EIRDYF+ FA+LP L+V+ YK  +R Y + +A+N GYYT  F   DG+ +   ARY FVY++N  +  WEII+HHSSA+P AP  L
Sbjct:   53 EVADTTDIWLNTVTSGSEEVVDEVVALYGKDGILWGTVSEQVRDNPAEIRDYFEYFAKLPELSVSSYKGCVRTYNENLAINIGYYTFTF-RKDGETIEVPARYSFVYQKN-GNNQWEIIEHHSSALPQAPEAL 183
The following BLAST results are available for this feature:
BLAST of NO03G00240 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005854563.14.900e-8184.21putative protein conserved in bacteria with a cyst... [more]
EWM29571.14.900e-8184.21uncharacterized protein Naga_100006g11 [Nannochlor... [more]
EWM24920.16.700e-3855.03uncharacterized protein Naga_100092g2 [Nannochloro... [more]
EWM24921.16.700e-3855.03uncharacterized protein Naga_100092g2 [Nannochloro... [more]
XP_005854298.11.100e-3755.03putative protein conserved in bacteria with a cyst... [more]
CBJ26233.13.900e-3048.08similar to Uncharacterized protein conserved in ba... [more]
CBJ26228.15.600e-2951.85similar to Uncharacterized protein conserved in ba... [more]
WP_036487251.17.400e-2953.73DUF4440 domain-containing protein [Myxosarcina sp.... [more]
WP_019506721.11.600e-2850.35DUF4440 domain-containing protein [Pleurocapsa sp.... [more]
WP_021834240.11.600e-2851.88DUF4440 domain-containing protein [Crocosphaera wa... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL065nonsL065Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR084ncniR084Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR050ngnoR050Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005850NSK005850Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G00240.1NO03G00240.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|547767gene_10311Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G00240.1NO03G00240.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G00240 ID=NO03G00240|Name=NO03G00240|organism=Nannochloropsis oceanica|type=gene|length=1384bp
CGTCCTTCTTGGTGTTCTTTGCTCGTTCACTTTTCCACTTTCTTGCCTTA
TTTTTCTTGTTGCTTGATGTGAAAATATCTCTTTTTGGGCCCTTGTATTA
GTCCTCAGTACAGATGGCGTCTTGATTTCTTCTGAGGGACAGTAAGGCAC
GCCTTTCTTCTCTTCCTTTCCCAGCAGACACAACTCATACGCATTTCGAG
ATCTCCCTCAGCGTCCGCACACCGGGCAGCTCCTTTCCGGTAGCGCGTGG
TCGCGTGTTACCTTGTCCGTTCAAGCGCATGCCCAGCACGATTTCATAGC
ACCACTCCCTATGAGCAGCACCGCATGCCCCACATGTCTGATCACCTCTC
TGTTCATCCCTCCCTTCCCTCCCACACTTCCATTAAACGCCGCAAAATTA
CCACCAACCCAACAAGCGAGCAAGAATGATCCTGGCTAAGTCCTTCGCGA
CCCAATCCCTGCGCCACCAGGCCACCGCCACCGCCGCCAAGgtaagtgct
agtagcagtcccagaaccttgcaagagagtagaccaaaattgtatacacc
cgcatccccagcgcctcctcttctgccttgtgcatttatgtaatcatggt
ctccctccctttcggacaccctattcaacaccaccccacagAAGCTGGCC
TCCGTGCAGCTCTTCTCGACGGTTCGCGAGACCCTCCCCCATCACCCGTC
CGATAAGGCCGCGATTGCTGAGGTGGCGGCGACGACCGAAAAATGGCTCA
AGACCGTCACTGGCCAGAAGCCGACCAGCCCCGCGGAGACGGCCGCCCTC
TACGCTAACGACGGCGTTCTCTGGGCCACCGTATCCACGGAGCTGCGCGT
GAACCCCAAGGAGATCCGCGACTACTTTGACGTGTTTGCACGCCTGCCTA
ACCTGACCGTGACGGACTACAAGCCCTTCATCCGCATGTATGGGGACATC
GCCCTGAACGACGGCTACTACACCGTGCACTTCGACTCCCCCGACGGCAA
GAAGGTCACGACCAAGGCCCGCTACGTCTTCGTCTACAAACGCAACGAGT
CCTCGGGCGCTTGGGAGATCATTGACCACCATTCCTCGGCCATGCCCGTG
GCACCCGCGGGACTCAAGACAGCCACCACCGTCGCACCGCCTAGCTAGAT
GGCAGACTGGAAACTCGTTTTGGTCGAGTGATGTGGCATCTGTAGGTGTG
AGCTCTTTCGTCTGTGGAGGAGGCAACGGTGTGCAGTGACCTCGATAGAG
GGTAGTAAGGTGAAAGAAGTGTACATTTACTCCGATTCCAATTGCAGCGA
ACTCAAAGAATTTTTAGAACGACAGAGGTAGGACTATAGAACAAAAACAA
GAAAAGTACAAAAGAAGAAAAACAGCTTTAGGGA
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protein sequence of NO03G00240.1

>NO03G00240.1-protein ID=NO03G00240.1-protein|Name=NO03G00240.1|organism=Nannochloropsis oceanica|type=polypeptide|length=191bp
MILAKSFATQSLRHQATATAAKKLASVQLFSTVRETLPHHPSDKAAIAEV
AATTEKWLKTVTGQKPTSPAETAALYANDGVLWATVSTELRVNPKEIRDY
FDVFARLPNLTVTDYKPFIRMYGDIALNDGYYTVHFDSPDGKKVTTKARY
VFVYKRNESSGAWEIIDHHSSAMPVAPAGLKTATTVAPPS*
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Synonyms
Publications