NO02G05700, NO02G05700 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G05700 vs. NCBI_GenBank
Match: XP_005855638.1 (assembly protein [Nannochloropsis gaditana CCMP526] >EKU20727.1 assembly protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 857.8 bits (2215), Expect = 1.900e-245 Identity = 425/567 (74.96%), Postives = 488/567 (86.07%), Query Frame = 0 Query: 10 RQWGASYLF---ATAALLGTVQAFLLPFNTPAQPPPSLAKDSGLWWQQQRQQG--RSTKLQAALAERPRSPSVTLDDSTALIEAETVALKPPSREEQARDWFNSVLSSREPNPLFHAATELGVGRLVDGETRAPTRKEEAWRFTDLSRVYSRKPGKAPAVLQPAQVALIKEKVKEHTLEVCEGRALVFVDGVFRPEFSPAGSVEGLKEEGVREGWKVGSIFDFTGEEQEELLREIEWSPEVGMRHTLAAGSLPFCSLNQACVKDAACLVVGERGEMAAPVQFLFISTSTEGEGGKEGGKEARVSHPRLVVIAKKRSAGKFVQSYVDIGEGVGLANACTTVRVDRRAEVQHLHANEMGGKGQLFDAVSVTTKKLSAYRNVFINVGGDMGRINLQATMNGTEGRVDTEGLTVSGEEQELDIHSYIHHLRKDGKSNMYQCNIVSGDSHCVFKGRMKLEPRARGVTADQLIRSIMLTDSCTVDAMPTLEVCSGDVDCTHGATVADIDENEAFYLQSRGIGRREARQVLMMGFAAQVYNQVPCERMRKRLSDRLYEVCPEVGMAESYEYLSI 572 R+ GAS F ATA G QAFL PFN PAQ + K S + QQ +Q+ R+T+L A LA+RPRS S ++S+ IEAETVALKPPSREEQA+DWFN+VL+ R+P+P F ATE GV R + GETRAPTR+EEAWRFTDLSR+Y R+P K PAVLQPAQV +K K++EHTLEVCEGR +VFVDGV RPE S V LKEEG +EGW+ GSIF+F+ EEQEEL RE+EW+PEVG+RHTLA+GSLPF LNQACVKDAACLVV ERGEM+APVQF+F+STS++GEGG EG K+ RVSHPRL V+A+KRSAGKFVQSY+DIG G LANACTTVRVDRRAEVQHLHANE+G +G +FDAVSVTTKKLSAY+NVF+NVGG++GR+N QAT+NGTEGRVDTEG+T++GEEQELDIHSYIHH RK G+SNMYQCNIVSGDSHCVFKGRMKLEPRARGVTADQLIRSIMLTDSCTVDAMPTLEVCSGDVDCTHGATVADIDENEAFYLQSRGI RREARQVLMMGFAAQVYNQ+PCE+M+KRL +RLY+VCP+VG+A+ YEYLS+ Sbjct: 11 RRRGASTGFIMAATAVAAGVAQAFLAPFNPPAQGGIGVQKASNIMHQQHQQKHSIRNTRLAATLADRPRSTS--FEESSKEIEAETVALKPPSREEQAKDWFNAVLADRDPHPAFGRATEEGVERFLAGETRAPTRREEAWRFTDLSRLYGRRPSKPPAVLQPAQVTALKAKIEEHTLEVCEGRVVVFVDGVHRPELS---HVARLKEEGPKEGWRAGSIFEFSKEEQEELFREVEWAPEVGLRHTLASGSLPFSCLNQACVKDAACLVVDERGEMSAPVQFIFVSTSSQGEGGAEGEKDVRVSHPRLAVVARKRSAGKFVQSYIDIGSGTALANACTTVRVDRRAEVQHLHANELGPRGLMFDAVSVTTKKLSAYKNVFVNVGGELGRVNFQATLNGTEGRVDTEGVTITGEEQELDIHSYIHHRRKGGESNMYQCNIVSGDSHCVFKGRMKLEPRARGVTADQLIRSIMLTDSCTVDAMPTLEVCSGDVDCTHGATVADIDENEAFYLQSRGISRREARQVLMMGFAAQVYNQIPCEKMKKRLGERLYDVCPDVGIAKKYEYLSV 572
BLAST of NO02G05700 vs. NCBI_GenBank
Match: EWM30100.1 (assembly protein [Nannochloropsis gaditana]) HSP 1 Score: 854.4 bits (2206), Expect = 2.100e-244 Identity = 421/568 (74.12%), Postives = 488/568 (85.92%), Query Frame = 0 Query: 8 QRRQWGASYLFATAAL--LGTVQAFLLPFNTPAQPPPSLAKDSGLWWQQQRQQG--RSTKLQAALAERPRSPSVTLDDSTALIEAETVALKPPSREEQARDWFNSVLSSREPNPLFHAATELGVGRLVDGETRAPTRKEEAWRFTDLSRVYSRKPGKAPAVLQPAQVALIKEKVKEHTLEVCEGRALVFVDGVFRPEFSPAGSVEGLKEEGVREGWKVGSIFDFTGEEQEELLREIEWSPEVGMRHTLAAGSLPFCSLNQACVKDAACLVVGERGEMAAPVQFLFISTSTEGEGGKEGGKEARVSHPRLVVIAKKRSAGKFVQSYVDIGEGVGLANACTTVRVDRRAEVQHLHANEMGGKGQLFDAVSVTTKKLSAYRNVFINVGGDMGRINLQATMNGTEGRVDTEGLTVSGEEQELDIHSYIHHLRKDGKSNMYQCNIVSGDSHCVFKGRMKLEPRARGVTADQLIRSIMLTDSCTVDAMPTLEVCSGDVDCTHGATVADIDENEAFYLQSRGIGRREARQVLMMGFAAQVYNQVPCERMRKRLSDRLYEVCPEVGMAESYEYLSI 572 +RR ++ A A+ +G QAFL PFN PAQ + K S + QQ +Q+ R+T+L A LA+RPRS S ++S+ IEAETVALKPPSREEQA+DWFN+VL+ R+P+P F ATE GV R + GETRAPTR+EEAWRFTDLSR+Y R+P K PAVLQPAQV +K K++EHTLEVCEGR +VFVDGV RPE S V LKEEG +EGW+ GSIF+F+ EEQEEL RE+EW+PEVG+RHTLA+GSLPF LNQACVKDAACLVV ERGEM+APVQF+F+STS++GEGG EG K+ RVSHPRL V+A+KRSAGKFVQSY+DIG G LANACTTVRVDRRAEVQHLHANE+G +G +FDAVSVTTKKLSAY+NVF+NVGG++GR+N QAT+NGTEGRVDTEG+T++GEEQELDIHSYIHH RK G+SNMYQCNIVSGDSHCVFKGRMKLEPRARGVTADQLIRSIMLTDSCTVDAMPTLEVCSGDVDCTHGATVADIDENEAFYLQSRGI RREARQVLMMGFAAQVYNQ+PCE+M+KRL +RLY+VCP+VG+A+ YEYLS+ Sbjct: 11 RRRGATTGFIMAATAVAAVGVAQAFLAPFNPPAQGGIGVQKASNIMHQQHQQKHSIRNTRLAATLADRPRSTS--FEESSKEIEAETVALKPPSREEQAKDWFNAVLADRDPHPAFGRATEEGVERFLAGETRAPTRREEAWRFTDLSRLYGRRPSKPPAVLQPAQVTALKAKIEEHTLEVCEGRVVVFVDGVHRPELS---HVARLKEEGPKEGWRAGSIFEFSKEEQEELFREVEWAPEVGLRHTLASGSLPFSCLNQACVKDAACLVVDERGEMSAPVQFIFVSTSSQGEGGAEGEKDVRVSHPRLAVVARKRSAGKFVQSYIDIGSGTALANACTTVRVDRRAEVQHLHANELGPRGLMFDAVSVTTKKLSAYKNVFVNVGGELGRVNFQATLNGTEGRVDTEGVTITGEEQELDIHSYIHHRRKGGESNMYQCNIVSGDSHCVFKGRMKLEPRARGVTADQLIRSIMLTDSCTVDAMPTLEVCSGDVDCTHGATVADIDENEAFYLQSRGISRREARQVLMMGFAAQVYNQIPCEKMKKRLGERLYDVCPDVGIAKKYEYLSV 573
BLAST of NO02G05700 vs. NCBI_GenBank
Match: CBN77201.1 (FeS assembly protein SufD [Ectocarpus siliculosus]) HSP 1 Score: 225.3 bits (573), Expect = 4.700e-55 Identity = 154/433 (35.57%), Postives = 214/433 (49.42%), Query Frame = 0 Query: 103 RDWFNSVLSSREPNPLFHAATELG-VGRLVDGETRAPTRKEEAWRFTDLSRVYSRKPGKAPAVLQPAQVALIKEKVKEHTLEVCEGRALVFVDGVFRPEFSPAGSVEGLKEEGVREGWKVGSIFDFTGEEQEELLREIEWSPEVGMRHTLAAGSLPFCSLNQACVKDAACLVVGERGEMAAPVQFLFISTSTEGEGGKEGGKEARVSHPRLVVIAKKRSAGKFVQSYVDIGEGVGLANACTTVRVDRRAEVQHLHANEMGGKGQLFDAVSVTTKKLSAYRNVFINVGGDMGRINLQATM--NGTEGRVDTEGLTVSGEEQELDIHSYIHHLRKDGKSNMYQCNIVSGDSHCVFKGRMKLEPRARGVTADQLIRSIMLTDSCTVDAMPTLEVCSGDVDCTHGATVADIDENEAFYLQSRGIGRREARQVLMMGF 533 R WF+++ P P + EL G E PTRK+E +R+TDL +Y A A+ A +K H LE +G+ +VFV+GVF E S ++ G+ EG G I G ++ + + PE GSL F SLNQAC DA ++V + + P+Q +F S EGE G VSHPRLVV A S QSY+ G GV LAN T V V RA V H +A EM +L D VSV S Y + G R N Q + G+ + T LT + + Q D+HS I H + Q N+VS + CVFKGR+ ++ A+ A+QL R+++++D V MP++E+ + DV CTHGAT+ D+++ E FYL SRGI + + MGF Sbjct: 119 RMWFDAIREGAVPRP--DSLVELSKAGEAELAELALPTRKQEPYRYTDLESLYRTDFTSAAPTTTAAETA---AAIKPHLLEASQGQQMVFVNGVFSDELSDVSALGGV------EGLVAGHIGAIEGAPLDQAKEMLSYLPEKDADFRTTQGSLAFASLNQACFADAGVIMVADGVTVEKPIQVIFFS---EGEEG------PTVSHPRLVVKAGADSHVTLTQSYLSRG-GVCLANGFTRVLVGDRATVTHDYAEEMSASDRLVDTVSVDQTTNSTYSVNQVLSGAFDARANFQIDLLETGSHCNIFTAALTTNNQRQ--DVHSTIRHKAEGTTCLQEQRNVVSDTADCVFKGRIVIDQVAQKTDANQLCRTLLVSDKARVTVMPSMEIIANDVKCTHGATICDLEDEELFYLMSRGISK------IQMGF 522
BLAST of NO02G05700 vs. NCBI_GenBank
Match: WP_011464156.1 (Fe-S cluster assembly protein SufD [Rhodoferax ferrireducens] >ABD69588.1 Iron-regulated ABC transporter permease protein SufD [Rhodoferax ferrireducens T118]) HSP 1 Score: 201.8 bits (512), Expect = 5.600e-48 Identity = 133/425 (31.29%), Postives = 201/425 (47.29%), Query Frame = 0 Query: 133 GETRAPTRKEEAWRFTDLSRV--YSRKPGKAPAVLQPAQVALIKEKVKEHTLEVCEGRALVFVDGVFRPEFSPAGSVEGLKEEGVREGWKVGSIFDFTGEEQEELLREIEWSPEVGMRHTLAAGSLPFCSLNQACVKDAACLVVGERGEMAAPVQFLFISTSTEGEGGKEGGKEARVSHPRLVVIAKKRSAGKFVQSYVDIGEGVGLANACTTVRVDRRAEVQHLHANEMGGKGQLFDAVSVTTKKLSAYRNVFINVGGDMGRINLQATMNGTEGRVDTEGLTVSGEEQELDIHSYIHHLRKDGKSNMYQCNIVSGDSHCVFKGRMKLEPRARGVTADQLIRSIMLTDSCTVDAMPTLEVCSGDVDCTHGATVADIDENEAFYLQSRGIGRREARQVLMMGFAAQVYNQVPCERMRKRLSDRLYE 556 G P+ +EAWRFT L+ S P + P L P + + H EV LVFVDGV P+ S LK + G VG++ + + P +G LA F +LN A ++DAA LVV +AAPV L+IST + SHPRL+++A S ++ YV + G NA V + A+V H+ + + +V+ S Y + I +GG + R++L+ + +GL + G +Q D H++I H + G S IV G +H VF G++ + P A+ + Q R+++L+ VD P LE+ + DV CTHGATV +D +E FYLQSRG+ AR +L F A+V N++P +R++L + E Sbjct: 48 GALTLPSTHDEAWRFTPLATFARQSFHPLRTPTALLPGDIKHL------HIEEVT--TRLVFVDGVHAPQLS------SLKPDA---GLAVGTLASMLARQASSI------EPHLGQH--LAFHDALFAALNTAFLQDAAVLVVPRETTLAAPVHVLYISTQPD-----------VASHPRLLLVAGAGSKATLIEDYVALHPGTYFTNAVAEVALGANAQVSHVRIQRESQQAFHMASCAVSLGAASRYHSASITLGGQISRLDLKVLQSADAAECALDGLALIGGQQLADTHTFIDHAKPHGVSRQLHKCIVGGAAHAVFNGQVMVRPGAQKTDSAQSSRNLLLSGKAQVDTQPQLEIFADDVKCTHGATVGQLDSDEVFYLQSRGLSEAVARNLLTYAFGAEVINRIPVASLRRQLEQTVLE 436
BLAST of NO02G05700 vs. NCBI_GenBank
Match: XP_001712249.1 (sufD [Hemiselmis andersenii] >ABW97924.1 sufD [Hemiselmis andersenii]) HSP 1 Score: 199.5 bits (506), Expect = 2.800e-47 Identity = 129/448 (28.79%), Postives = 229/448 (51.12%), Query Frame = 0 Query: 104 DWFNSVLSSREPNPLFHAATELGVGRLVDGETRAPTRKEEAWRFTDLSRVYSRKPGKAPAVLQPAQVALIKEKVKEHTLEVCEGRALVFVDGVFRPEFSPAGSVEGLKEEGVREGWKVGSIFDFTGEEQEELLREIEWSPEVGMRHTLAAGSLPFCSLNQACVKDAACLVVGERGEMAAPVQFLFISTSTEGEGGKEGGKEARVSHPRLVVIAKKRSAGKFVQSYVDIGEGVGLANACTTVRVDRRAEVQHLHANEMGGKGQLFDAVSVTTKKLSAYRNVFINVGGDMGRINLQATMNGTEGRVDTEGLTVSGEEQELDIHSYIHHLRKDGKSNMYQCNIVSGDSHCVFKGRMKLEPRARGVTADQLIRSIMLTDSCTVDAMPTLEVCSGDVDCTHGATVADIDENEAFYLQSRGIGRREARQVLMMGFAAQVYNQVPCERMRKRLSD 552 +W NS+L + F+ +G + T P++K+E+WRFT L R++ K + + + + VK+ LE + R VF++GVF P A +E + + +G D E++ + +R++ E G+ G P LN A + + A L + ++ P+Q LF S++ E + +L+++ +K S K +Q +V E N+ TT+ VD A++ N++ K F+++ +K S++ + + GG + RI+L +NG + EG+TV Q DIHS I H KS+ Q N++S H +F G++++ A ++QL +S++L+ + VD+MP LE+ + DV CTHG+TV+D+D+ + FY +SRGI +AR +L +GF ++ ++P E + + LS+ Sbjct: 49 EWINSILFQEKQKSSFNINQLRKIGNNILKNTNFPSKKDESWRFTKLDRLFGMKFANSDSEVN-------ADFVKKFFLENSQARC-VFLNGVFFPSLFQA------REN--TDSYFLGRFSDL-NEKERKKIRDLAGKGESGIN----GGFFPI--LNLANLDEIAVLYIKADSKIKDPIQILFSSSTNE---------TPICINQKLIIVCEKNSKAKIIQHHVGSNESEFFDNSTTTILVDEEAQIDFFLINQVTEKASNFNSIHADLRKGSSFNFLSASFGGFLSRISLGIDLNGINASCNVEGVTVVKNSQISDIHSRISHNYPLCKSSQLQKNLISDKGHAIFAGKVQVHNGAYETESNQLCKSLLLSQTSKVDSMPILEINNEDVKCTHGSTVSDLDQEQLFYFKSRGIPIEKARFLLTIGFIKEIIEKLPKE-LNENLSE 463
BLAST of NO02G05700 vs. NCBI_GenBank
Match: WP_090666866.1 (Fe-S cluster assembly protein SufD [Nitrosomonas nitrosa] >SFM08778.1 Iron-regulated ABC transporter permease protein SufD [Nitrosomonas nitrosa]) HSP 1 Score: 197.2 bits (500), Expect = 1.400e-46 Identity = 125/417 (29.98%), Postives = 203/417 (48.68%), Query Frame = 0 Query: 133 GETRAPTRKEEAWRFTDLSRVYSRKPGKAPAVLQPAQVALIKEKVKEHTLEVCEGRALVFVDGVFRPEFSPAGSVEGLKEEGVREGWKVGSIFDFTGEEQEELLREIEWSPEVGMRHTLAAGSLPFCSLNQACVKDAACLVVGERGEMAAPVQFLFISTSTEGEGGKEGGKEARVSHPRLVVIAKKRSAGKFVQSYVDIGEGVGLANACTTVRVDRRAEVQHLHANEMGGKGQLFDAVSVTTKKLSAYRNVFINVGGDMGRINLQATMNGTEGRVDTEGLTVSGEEQELDIHSYIHHLRKDGKSNMYQCNIVSGDSHCVFKGRMKLEPRARGVTADQLIRSIMLTDSCTVDAMPTLEVCSGDVDCTHGATVADIDENEAFYLQSRGIGRREARQVLMMGFAAQVYNQVPCERMRKRL 550 G R PT +E WRFTD+S + +R P PA A+++L E LVFVDG F PE S G G+ VGS+ E++ ++ E R+ + F +LN A ++D+AC++V + AP+ LFI+ ++A S+PR +VIA+ S + ++ Y+ + + N + + A V+H+ + +V+ S Y ++ I +G + R NL +NG +GL + ++Q D H++I H++ GKS IV G +H VF G++ + P A+ + QL R+++LT+ VD P LE+ + DV C HGATV +D+ E FYLQSRG+ AR +L F +V +++ ++K+L Sbjct: 40 GTLRMPTTGDEEWRFTDISPL-NRLP--YPAAYPTAELSL---SAGEPYYLAETAHRLVFVDGQFAPELSSIGDTTGI---------VVGSLSSLMATHGEKIAHKLGNLAE--YRNDI------FTALNTAFLRDSACIIVPQHVSETAPIHLLFIA-----------NQKAVTSYPRCLVIAESGSKVRILEDYIGTEKDAYVTNTVVEMSLGSNAHVEHIRVQRDNQQAFHIGNCTVSLAPASQYHSISITLGAFISRYNLNILLNGEGAECTADGLALISDQQLADTHTFIDHVKPHGKSRQLHKCIVDGMAHGVFNGKIMVRPHAQQTDSSQLSRNLLLTNKACVDTKPQLEIFANDVKCAHGATVGQLDKEEVFYLQSRGLSDLAARNLLTYAFGGEVIDRISIPSLKKQL 422
BLAST of NO02G05700 vs. NCBI_GenBank
Match: PIY29323.1 (Fe-S cluster assembly protein SufD [Comamonadaceae bacterium CG_4_10_14_3_um_filter_60_42]) HSP 1 Score: 196.8 bits (499), Expect = 1.800e-46 Identity = 130/420 (30.95%), Postives = 203/420 (48.33%), Query Frame = 0 Query: 138 PTRKEEAWRFTDLSRV--YSRKPGKAPAVLQPAQVALIKEKVKEHTLEVCEGRALVFVDGVFRPEFSPAGSVEGLKEEGVREGWKVGSIFDFTGEEQEELLREIEWSPEVGMRHTLAAGSLPFCSLNQACVKDAACLVVGERGEMAAPVQFLFISTSTEGEGGKEGGKEARVSHPRLVVIAKKRSAGKFVQSYVDIGEGVGLANACTTVRVDRRAEVQHLHANEMGGKGQLFDAVSVTTKKLSAYRNVFINVGGDMGRINLQATMNGTEGRVDTEGLTVSGEEQELDIHSYIHHLRKDGKSNMYQCNIVSGDSHCVFKGRMKLEPRARGVTADQLIRSIMLTDSCTVDAMPTLEVCSGDVDCTHGATVADIDENEAFYLQSRGIGRREARQVLMMGFAAQVYNQVPCERMRKRLSDRLYE 556 P+ +EAWRFT L+ + S + P+ LQP +A + + E T LVFVDGV P+ S SV G G +G++ D + L E + TL F ++N A ++DAA L+V +AAPV LFIST TE SHPRL+++A S ++ YV + +G NA + + A++ H+ + + +V+ S Y +V + +G + R++L+ + +GL + EQ D HS+I H + G S IV G SH VF G++ + P A+ + Q R+++L+ +D P LE+ + DV CTHGATV +D +E FYLQSRG+ AR +L F A++ ++P +R++L + E Sbjct: 59 PSTHDEAWRFTPLAALAHQSFHVVRTPSELQPDDIAHL--SIAEATTR------LVFVDGVVAPQLS---SVSG------ESGLVIGTLADLLSGKASGL--ETHLGQHANFQDTL------FTAVNTAFLQDAAVLMVPPDTALAAPVHLLFISTQTE-----------VASHPRLLLVAGAGSKATVIEDYVALHDGAYFTNAVAEMVLQPNAQLTHVRLQRESSQAFHMASCAVSLGAASHYHSVNLALGAHISRLDLKVVQTAEGTQCTLDGLALINGEQLADTHSFIDHAKPHGTSRQLHKCIVGGSSHAVFNGQVMVRPGAQQTDSAQSSRNLLLSKKAQIDTQPQLEIFADDVKCTHGATVGQLDSDEVFYLQSRGLSEHVARNLLTYAFGAEIIERIPVASLRQQLEQTVLE 442
BLAST of NO02G05700 vs. NCBI_GenBank
Match: WP_107783883.1 (Fe-S cluster assembly protein SufD [Nitrosomonas nitrosa] >PTM68770.1 iron-regulated ABC transporter permease protein SufD [Nitrosomonas nitrosa]) HSP 1 Score: 196.8 bits (499), Expect = 1.800e-46 Identity = 125/417 (29.98%), Postives = 203/417 (48.68%), Query Frame = 0 Query: 133 GETRAPTRKEEAWRFTDLSRVYSRKPGKAPAVLQPAQVALIKEKVKEHTLEVCEGRALVFVDGVFRPEFSPAGSVEGLKEEGVREGWKVGSIFDFTGEEQEELLREIEWSPEVGMRHTLAAGSLPFCSLNQACVKDAACLVVGERGEMAAPVQFLFISTSTEGEGGKEGGKEARVSHPRLVVIAKKRSAGKFVQSYVDIGEGVGLANACTTVRVDRRAEVQHLHANEMGGKGQLFDAVSVTTKKLSAYRNVFINVGGDMGRINLQATMNGTEGRVDTEGLTVSGEEQELDIHSYIHHLRKDGKSNMYQCNIVSGDSHCVFKGRMKLEPRARGVTADQLIRSIMLTDSCTVDAMPTLEVCSGDVDCTHGATVADIDENEAFYLQSRGIGRREARQVLMMGFAAQVYNQVPCERMRKRL 550 G R PT +E WRFTD+S + +R P PA A+++L E LVFVDG F PE S G G+ VGS+ E++ ++ E R+ + F +LN A ++D+AC++V + AP+ LFI+ ++A S+PR +VIA+ S + ++ Y+ + + N + + A V+H+ + +V+ S Y ++ I +G + R NL +NG +GL + ++Q D H++I H++ GKS IV G +H VF G++ + P A+ + QL R+++LT+ VD P LE+ + DV C HGATV +D+ E FYLQSRG+ AR +L F +V +++ ++K+L Sbjct: 40 GTLRMPTTGDEEWRFTDISPL-NRLP--YPAAYPTAELSL---SAGEPYYLAETAHRLVFVDGQFAPELSSIGDTTGI---------VVGSLSSLMATHGEKIAHKLGNLAE--YRNDI------FTALNTAFLRDSACIIVPQHVSETAPIHLLFIA-----------NQKAVTSYPRCLVIAESGSKVRILEDYIGTEKDAYVTNTVVEMSLGSNAHVEHIRVQRDNQQAFHIGNCTVSLAPASQYHSISITLGAFISRYNLNILLNGEGAECTADGLALISDQQLADTHTFIDHVKPHGKSRQLHKCIVDGMAHGVFNGKIMVRPHAQQTDSSQLSRNLLLTNKARVDTKPQLEIFANDVKCAHGATVGQLDKEEIFYLQSRGLSDLAARNLLTYAFGGEVIDRISIPSLKKQL 422
BLAST of NO02G05700 vs. NCBI_GenBank
Match: WP_107789961.1 (Fe-S cluster assembly protein SufD [Nitrosomonas nitrosa] >PTQ96172.1 iron-regulated ABC transporter permease protein SufD [Nitrosomonas nitrosa]) HSP 1 Score: 196.8 bits (499), Expect = 1.800e-46 Identity = 125/417 (29.98%), Postives = 203/417 (48.68%), Query Frame = 0 Query: 133 GETRAPTRKEEAWRFTDLSRVYSRKPGKAPAVLQPAQVALIKEKVKEHTLEVCEGRALVFVDGVFRPEFSPAGSVEGLKEEGVREGWKVGSIFDFTGEEQEELLREIEWSPEVGMRHTLAAGSLPFCSLNQACVKDAACLVVGERGEMAAPVQFLFISTSTEGEGGKEGGKEARVSHPRLVVIAKKRSAGKFVQSYVDIGEGVGLANACTTVRVDRRAEVQHLHANEMGGKGQLFDAVSVTTKKLSAYRNVFINVGGDMGRINLQATMNGTEGRVDTEGLTVSGEEQELDIHSYIHHLRKDGKSNMYQCNIVSGDSHCVFKGRMKLEPRARGVTADQLIRSIMLTDSCTVDAMPTLEVCSGDVDCTHGATVADIDENEAFYLQSRGIGRREARQVLMMGFAAQVYNQVPCERMRKRL 550 G R PT +E WRFTD+S + +R P PA A+++L E LVFVDG F PE S G G+ VGS+ E++ ++ E R+ + F +LN A ++D+AC++V + AP+ LFI+ ++A S+PR +VIA+ S + ++ Y+ + + N + + A V+H+ + +V+ S Y ++ I +G + R NL +NG +GL + ++Q D H++I H++ GKS IV G +H VF G++ + P A+ + QL R+++LT+ VD P LE+ + DV C HGATV +D+ E FYLQSRG+ AR +L F +V +++ ++K+L Sbjct: 40 GTLRMPTTGDEEWRFTDISPL-NRLP--YPAAYPTAELSL---SAGEPYYLAETAHRLVFVDGQFAPELSSIGDTTGI---------VVGSLSSLMATHGEKIAHKLGNLAE--YRNDI------FTALNTAFLRDSACIIVPQHVSETAPIHLLFIA-----------NQKAVTSYPRCLVIAESGSKVRILEDYIGTEKDAYVTNTVVEMSLGSNAHVEHIRVQRDNQQAFHIGNCTVSLAPASQYHSISITLGAFISRYNLNILLNGEGAECTADGLALISDQQLADTHTFIDHVKPHGKSRQLHKCIVDGMAHGVFNGKIMVRPHAQQTDSSQLSRNLLLTNKARVDTKPQLEIFANDVKCAHGATVGQLDKEEIFYLQSRGLSDLAARNLLTYAFGGEVIDRISIPSLKKQL 422
BLAST of NO02G05700 vs. NCBI_GenBank
Match: WP_026778676.1 (Fe-S cluster assembly protein SufD [Polaromonas sp. EUR3 1.2.1]) HSP 1 Score: 196.1 bits (497), Expect = 3.100e-46 Identity = 137/465 (29.46%), Postives = 212/465 (45.59%), Query Frame = 0 Query: 102 ARDWFNSVLSSREPNPLFHAATEL---------GVGRLVDGETRAPTRKEEAWRFTDLSRVYSRK--PGKAPAVLQPAQVALIKEKVKEHTLEVCEGRALVFVDGVFRPEFSPAGSVEGLKEEGVREGWKVGSIFDFTGEEQEELLREIEWSPEVGMRHTLAAGSLPFCSLNQACVKDAACLVVGERGEMAAPVQFLFISTSTEGEGGKEGGKEARVSHPRLVVIAKKRSAGKFVQSYVDIGEGVGLANACTTVRVDRRAEVQHLHANEMGGKGQLFDAVSVTTKKLSAYRNVFINVGGDMGRINLQATMNGTEGRVDTEGLTVSGEEQELDIHSYIHHLRKDGKSNMYQCNIVSGDSHCVFKGRMKLEPRARGVTADQLIRSIMLTDSCTVDAMPTLEVCSGDVDCTHGATVADIDENEAFYLQSRGIGRREARQVLMMGFAAQVYNQVPCERMRKRLSDRLYE 556 AR +S+L+S P P A T L + R+ G PT +EAWRFT++S + + P + P LQ + + ++E T LVFVDGV P+ S + G+ + K L+ E L F +LN A + DAA ++V +A PV LF+ST + SHPR++++A+ SA ++ Y + +G NA V + A+V+H+ G+ + +V+ S Y +V I +G + R+ L +GL + G EQ D H++I H + G S IV G +H VF G++ + P A+ + Q R+++LT VD P LE+ + DV CTHGATV +D E FYLQSRG+ AR +L F A+V +++P +R++L + E Sbjct: 8 ARGVLDSLLASLAPAPGSLAPTTLEWLNALRAEALERV--GALTLPTPHDEAWRFTNISALTRKSFHPLRTPTALQAGDIGHL--HIEEATTR------LVFVDGVHAPQLSSITAEAGVVVSTLSAAVKT-----------HALVIEQHLGQHAPFHDAL------FPALNTAFLHDAAVVIVPRETLIATPVHLLFLSTQPD-----------LASHPRVLLVAESGSAVTVIEDYAALHDGAYFTNALAEVVLAANAQVEHIRVQRESGQAFHMASCAVSLGAASRYHSVSIALGAQISRLALSVVQTADAAECSLDGLALIGAEQLADTHTFIDHAKPHGVSRQLHKCIVGGAAHAVFNGKVMVRPGAQKTDSAQSSRNLLLTGKALVDTQPQLEIFADDVKCTHGATVGQLDSEEVFYLQSRGLPETVARNLLTYAFGAEVIDRIPVASLRRQLEQTVLE 434 The following BLAST results are available for this feature:
BLAST of NO02G05700 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G05700 ID=NO02G05700|Name=NO02G05700|organism=Nannochloropsis oceanica|type=gene|length=2054bpback to top protein sequence of NO02G05700.1 >NO02G05700.1-protein ID=NO02G05700.1-protein|Name=NO02G05700.1|organism=Nannochloropsis oceanica|type=polypeptide|length=572bpback to top Synonyms
Publications
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