NO02G05660, NO02G05660 (gene) Nannochloropsis oceanica

Overview
NameNO02G05660
Unique NameNO02G05660
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length785
Alignment locationchr2:1501734..1502518 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:1501734..1502518 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO02G05660 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL019nonsL019Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR004ngnoR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G05660.1NO02G05660.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|575543gene_1153Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G05660.1NO02G05660.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G05660 ID=NO02G05660|Name=NO02G05660|organism=Nannochloropsis oceanica|type=gene|length=785bp
ATGAAGCTGCTTCTGCTGCCCCTCCTTGCTGCCACTATCGCTGGCCTTAC
TCAGGCACAGgtatgcttgtcatgttgttcacattggacaaagttctgct
gcgcctgcctggcttccacgcggttcgacacctacccatcactgcgcgcc
tgaagaccagctctttttctctcccaagcccttgcttagtcaccatctgc
ttgccgaccatccactgcatctcactttgattccccgtattgtttcccca
cccaatatgcactctcttccagGACATCGCCGACACCTCTGCCTCTGTCA
ACTTTCCCCCCTCCACTGTCCTCAATGACGATGATACCTCCGCGGGCTCG
TCCTTGAGGGGCTACGGCTTAAAGGGTTTCATTGTTCCGGCCGAACACAG
TAAAGACCCTGCATGTGGCAAGgtgggtggtgcagagaggggtggaggaa
gggagggagggaaggacgaaagagacgcacattgtaaatgattttgtgct
ttatttccttgtgtgggtattcggaaaccaggcagagaacgagttaaggt
caaaggattgatgacatgtaaatgtctactcctctcttaacctttaaaca
tcatctctcacacacacacattctcctccgaccgtccttttttccctttt
cctccctccttccctccttctctccctccctccttgtcttcttttctgct
gctatttcagCCTGGTTGCTACTACTCGGTGGACTGCGACGAAGACAATG
TCTGCAAGAGTGTATGCACGGGGAGTGGATGCTAA
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protein sequence of NO02G05660.1

>NO02G05660.1-protein ID=NO02G05660.1-protein|Name=NO02G05660.1|organism=Nannochloropsis oceanica|type=polypeptide|length=95bp
MKLLLLPLLAATIAGLTQAQDIADTSASVNFPPSTVLNDDDTSAGSSLRG
YGLKGFIVPAEHSKDPACGKPGCYYSVDCDEDNVCKSVCTGSGC*
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Synonyms
Publications