NO02G05390, NO02G05390 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G05390 vs. NCBI_GenBank
Match: EMP28956.1 (Cyclin-L1 [Chelonia mydas]) HSP 1 Score: 91.7 bits (226), Expect = 5.000e-15 Identity = 71/232 (30.60%), Postives = 107/232 (46.12%), Query Frame = 0 Query: 18 SESNLLLHNCVRVLLDAGERLRLPQETIATAVIIFHRFFAKRSLSDHLAKQRMDVVLMTCLFLAAKVEEQPRRIRDAINCVYFAQRRMQILRTAFTADVAGGNKGDKGGEREVGKNSGDFRQQDERRHGVATAPQREADAILPLDRGYWEMKESVVDMEQLVLRVLGFDLDTYRPYRILLNYARSLRA--RPVTVEVAWALLNDSLFSPAFCLTRPSQAQAVAVLHLAQRFL 248 SE++L + C ++ AG LRLPQ +AT ++FHRFF +S K ++V M C+ LA+K+EE PRRIRD IN V+ R+++ RT + L LD+ Y K V+ E+ VL+ LGF + P++I++ Y + L V+ AW +NDSL + F +P + A A ++LA R L Sbjct: 64 SETDLRILGC-ELIQAAGILLRLPQVAMATGQVLFHRFFYSKS----FVKHNFEIVAMACINLASKIEEAPRRIRDVIN-VFHHLRQLRAKRT---------------------------------------------PSPLILDQNYINTKNQVIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECERNQTLVQTAWNYMNDSLRTNVFVRFQP-ETIACACIYLAARAL 243
BLAST of NO02G05390 vs. NCBI_GenBank
Match: XP_005287037.1 (cyclin-L1 [Chrysemys picta bellii] >XP_024048448.1 cyclin-L1 [Terrapene mexicana triunguis]) HSP 1 Score: 91.7 bits (226), Expect = 5.000e-15 Identity = 71/232 (30.60%), Postives = 107/232 (46.12%), Query Frame = 0 Query: 18 SESNLLLHNCVRVLLDAGERLRLPQETIATAVIIFHRFFAKRSLSDHLAKQRMDVVLMTCLFLAAKVEEQPRRIRDAINCVYFAQRRMQILRTAFTADVAGGNKGDKGGEREVGKNSGDFRQQDERRHGVATAPQREADAILPLDRGYWEMKESVVDMEQLVLRVLGFDLDTYRPYRILLNYARSLRA--RPVTVEVAWALLNDSLFSPAFCLTRPSQAQAVAVLHLAQRFL 248 SE++L + C ++ AG LRLPQ +AT ++FHRFF +S K ++V M C+ LA+K+EE PRRIRD IN V+ R+++ RT + L LD+ Y K V+ E+ VL+ LGF + P++I++ Y + L V+ AW +NDSL + F +P + A A ++LA R L Sbjct: 64 SETDLRILGC-ELIQAAGILLRLPQVAMATGQVLFHRFFYSKS----FVKHNFEIVAMACINLASKIEEAPRRIRDVIN-VFHHLRQLRAKRT---------------------------------------------PSPLILDQNYINTKNQVIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECERNQTLVQTAWNYMNDSLRTNVFVRFQP-ETIACACIYLAARAL 243
BLAST of NO02G05390 vs. NCBI_GenBank
Match: XP_007067141.1 (PREDICTED: cyclin-L1 isoform X1 [Chelonia mydas]) HSP 1 Score: 91.7 bits (226), Expect = 5.000e-15 Identity = 71/232 (30.60%), Postives = 107/232 (46.12%), Query Frame = 0 Query: 18 SESNLLLHNCVRVLLDAGERLRLPQETIATAVIIFHRFFAKRSLSDHLAKQRMDVVLMTCLFLAAKVEEQPRRIRDAINCVYFAQRRMQILRTAFTADVAGGNKGDKGGEREVGKNSGDFRQQDERRHGVATAPQREADAILPLDRGYWEMKESVVDMEQLVLRVLGFDLDTYRPYRILLNYARSLRA--RPVTVEVAWALLNDSLFSPAFCLTRPSQAQAVAVLHLAQRFL 248 SE++L + C ++ AG LRLPQ +AT ++FHRFF +S K ++V M C+ LA+K+EE PRRIRD IN V+ R+++ RT + L LD+ Y K V+ E+ VL+ LGF + P++I++ Y + L V+ AW +NDSL + F +P + A A ++LA R L Sbjct: 64 SETDLRILGC-ELIQAAGILLRLPQVAMATGQVLFHRFFYSKS----FVKHNFEIVAMACINLASKIEEAPRRIRDVIN-VFHHLRQLRAKRT---------------------------------------------PSPLILDQNYINTKNQVIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECERNQTLVQTAWNYMNDSLRTNVFVRFQP-ETIACACIYLAARAL 243
BLAST of NO02G05390 vs. NCBI_GenBank
Match: XP_007067142.1 (PREDICTED: cyclin-L1 isoform X2 [Chelonia mydas]) HSP 1 Score: 91.7 bits (226), Expect = 5.000e-15 Identity = 71/232 (30.60%), Postives = 107/232 (46.12%), Query Frame = 0 Query: 18 SESNLLLHNCVRVLLDAGERLRLPQETIATAVIIFHRFFAKRSLSDHLAKQRMDVVLMTCLFLAAKVEEQPRRIRDAINCVYFAQRRMQILRTAFTADVAGGNKGDKGGEREVGKNSGDFRQQDERRHGVATAPQREADAILPLDRGYWEMKESVVDMEQLVLRVLGFDLDTYRPYRILLNYARSLRA--RPVTVEVAWALLNDSLFSPAFCLTRPSQAQAVAVLHLAQRFL 248 SE++L + C ++ AG LRLPQ +AT ++FHRFF +S K ++V M C+ LA+K+EE PRRIRD IN V+ R+++ RT + L LD+ Y K V+ E+ VL+ LGF + P++I++ Y + L V+ AW +NDSL + F +P + A A ++LA R L Sbjct: 9 SETDLRILGC-ELIQAAGILLRLPQVAMATGQVLFHRFFYSKS----FVKHNFEIVAMACINLASKIEEAPRRIRDVIN-VFHHLRQLRAKRT---------------------------------------------PSPLILDQNYINTKNQVIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECERNQTLVQTAWNYMNDSLRTNVFVRFQP-ETIACACIYLAARAL 188
BLAST of NO02G05390 vs. NCBI_GenBank
Match: XP_015670882.1 (PREDICTED: cyclin-L1 [Protobothrops mucrosquamatus]) HSP 1 Score: 91.3 bits (225), Expect = 6.500e-15 Identity = 71/232 (30.60%), Postives = 108/232 (46.55%), Query Frame = 0 Query: 18 SESNLLLHNCVRVLLDAGERLRLPQETIATAVIIFHRFFAKRSLSDHLAKQRMDVVLMTCLFLAAKVEEQPRRIRDAINCVYFAQRRMQILRTAFTADVAGGNKGDKGGEREVGKNSGDFRQQDERRHGVATAPQREADAILPLDRGYWEMKESVVDMEQLVLRVLGFDLDTYRPYRILLNYARSLRA--RPVTVEVAWALLNDSLFSPAFCLTRPSQAQAVAVLHLAQRFL 248 SE++L + C ++ AG LRLPQ +AT ++FHRFF +S K ++V M C+ LA+K+EE PRRIRD IN V+ R+++I RT + L LD+ Y K V+ E+ VL+ LGF + P++I++ Y + L V+ AW +NDSL + F + ++ A A ++LA R L Sbjct: 69 SETDLRILGC-ELIQAAGILLRLPQVAMATGQVLFHRFFYSKS----FVKHSFEIVAMACINLASKIEEAPRRIRDVIN-VFHHLRQLRIKRT---------------------------------------------PSPLILDQNYINTKNQVIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECERNQTLVQTAWNYMNDSLRNNVF-VRFQAETIACACIYLAARAL 248
BLAST of NO02G05390 vs. NCBI_GenBank
Match: XP_003218264.3 (PREDICTED: cyclin-L1 isoform X1 [Anolis carolinensis]) HSP 1 Score: 91.3 bits (225), Expect = 6.500e-15 Identity = 71/232 (30.60%), Postives = 107/232 (46.12%), Query Frame = 0 Query: 18 SESNLLLHNCVRVLLDAGERLRLPQETIATAVIIFHRFFAKRSLSDHLAKQRMDVVLMTCLFLAAKVEEQPRRIRDAINCVYFAQRRMQILRTAFTADVAGGNKGDKGGEREVGKNSGDFRQQDERRHGVATAPQREADAILPLDRGYWEMKESVVDMEQLVLRVLGFDLDTYRPYRILLNYARSLRA--RPVTVEVAWALLNDSLFSPAFCLTRPSQAQAVAVLHLAQRFL 248 SE++L + C ++ AG LRLPQ +AT ++FHRFF +S K ++V M C+ LA+K+EE PRRIRD IN V+ R+++ RT + L LD+ Y K V+ E+ VL+ LGF + P++I++ Y + L V+ AW +NDSL + F +P + A A ++LA R L Sbjct: 75 SETDLRILGC-ELIQAAGILLRLPQVAMATGQVLFHRFFYSKS----FVKHSFEIVAMACINLASKIEEAPRRIRDVIN-VFHHLRQLRAKRT---------------------------------------------PSPLILDQNYINTKNQVIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECERNQTLVQTAWNYMNDSLRTNVFVRFQP-ETIACACIYLAARAL 254
BLAST of NO02G05390 vs. NCBI_GenBank
Match: XP_018925564.1 (PREDICTED: cyclin-L2-like [Cyprinus carpio]) HSP 1 Score: 91.3 bits (225), Expect = 6.500e-15 Identity = 73/236 (30.93%), Postives = 105/236 (44.49%), Query Frame = 0 Query: 14 GTRASESNLLLHNCVRVLLDAGERLRLPQETIATAVIIFHRFFAKRSLSDHLAKQRMDVVLMTCLFLAAKVEEQPRRIRDAINCVYFAQRRMQILRTAFTADVAGGNKGDKGGEREVGKNSGDFRQQDERRHGVATAPQREADAILPLDRGYWEMKESVVDMEQLVLRVLGFDLDTYRPYRILLNYARSLRARPVT--VEVAWALLNDSLFSPAFCLTRPSQAQAVAVLHLAQRFL 248 G A L + + AG LRLPQ +ATA I+FHRFF +S H A + V M CL LA+K+EE+PRR+RD +N + + D AG RR G + LD GY K V+ E+ VL+ LGF + P+++++ Y + L T V++AW +NDSL + F R ++ A A + L+ R L Sbjct: 48 GLPARTEEQLRNRMCETIQSAGILLRLPQVAMATAQILFHRFFYCKSFVRHCA----ETVAMACLQLASKIEEEPRRVRDVLNVFHHLK------------DAAG-----------------------HRRRGP-----------MLLDDGYVSRKSDVIKAERRVLKELGFCVHVKHPHKVIVMYLQVLECEKNTRLVQMAWNYMNDSLRTDVFLRFR-AETIACACIFLSARVL 232
BLAST of NO02G05390 vs. NCBI_GenBank
Match: XP_020380495.1 (LOW QUALITY PROTEIN: cyclin-L1-like [Rhincodon typus]) HSP 1 Score: 91.3 bits (225), Expect = 6.500e-15 Identity = 70/232 (30.17%), Postives = 111/232 (47.84%), Query Frame = 0 Query: 19 ESNLLLHNCVRVLLDAGERLRLPQETIATAVIIFHRFFAKRSLSDHLAKQRMDVVLMTCLFLAAKVEEQPRRIRDAINCVYFAQRRMQILRTAFTADVAGGNKGDKGGEREVGKNSGDFRQQDERRHGVATAPQREADAILPLDRGYWEMKESVVDMEQLVLRVLGFDLDTYRPYRILLNYARSL---RARPVTVEVAWALLNDSLFSPAFCLTRPSQAQAVAVLHLAQRFL 248 E +L + C ++ AG L+LPQ +AT ++F RFF +S K M+++ M C+ LA+K+EE PRRIRD IN V+ R+++ ++++ LPLD+ Y +K V+ E+ VL+ LGF + P++I++ Y + L R RP+ V+ AW +NDSL + F P + A A ++LA R L Sbjct: 47 EIDLRIVGC-ELIQAAGILLKLPQVAMATGQVLFQRFFYSKS----FVKHPMEILSMACVHLASKIEEDPRRIRDVIN-VFHHLRKLR---------------------------------------------EKKSPTPLPLDQSYVNLKNQVIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECERNRPL-VQTAWNYMNDSLRTDVFVRYHP-ETIACACIYLAARAL 225
BLAST of NO02G05390 vs. NCBI_GenBank
Match: XP_004441727.1 (PREDICTED: cyclin-L1 isoform X1 [Ceratotherium simum simum]) HSP 1 Score: 90.9 bits (224), Expect = 8.500e-15 Identity = 71/232 (30.60%), Postives = 107/232 (46.12%), Query Frame = 0 Query: 18 SESNLLLHNCVRVLLDAGERLRLPQETIATAVIIFHRFFAKRSLSDHLAKQRMDVVLMTCLFLAAKVEEQPRRIRDAINCVYFAQRRMQILRTAFTADVAGGNKGDKGGEREVGKNSGDFRQQDERRHGVATAPQREADAILPLDRGYWEMKESVVDMEQLVLRVLGFDLDTYRPYRILLNYARSLRA--RPVTVEVAWALLNDSLFSPAFCLTRPSQAQAVAVLHLAQRFL 248 SE++L + C ++ AG LRLPQ +AT ++FHRFF +S K ++V M C+ LA+K+EE PRRIRD IN V+ R+++ RT + L LD+ Y K V+ E+ VL+ LGF + P++I++ Y + L V+ AW +NDSL + F +P + A A ++LA R L Sbjct: 78 SETDLRILGC-ELIQSAGILLRLPQVAMATGQVLFHRFFYSKS----FVKHSFEIVAMACINLASKIEEAPRRIRDVIN-VFHHLRQLRGKRT---------------------------------------------PSPLILDQNYINTKNQVIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECERNQTLVQTAWNYMNDSLRTNVFVRFQP-ETIACACIYLAARAL 257
BLAST of NO02G05390 vs. NCBI_GenBank
Match: XP_005758905.1 (hypothetical protein EMIHUDRAFT_471193 [Emiliania huxleyi CCMP1516] >EOD06476.1 hypothetical protein EMIHUDRAFT_471193 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 90.9 bits (224), Expect = 8.500e-15 Identity = 70/230 (30.43%), Postives = 105/230 (45.65%), Query Frame = 0 Query: 16 RASESNLLLHNCVRVLLDAGERLRLPQETIATAVIIFHRFFAKRSLSDHLAKQRMDVVLMTCLFLAAKVEEQPRRIRDAINCVYFAQRRMQILRTAFTADVAGGNKGDKGGE--REVGKNSGDFRQQDERRHGVATAPQREADAILPLDRGYWEMKESVVDMEQLVLRVLGFDLDTYRPYRILLNYARSLRARPVTVEVAWALLNDSLFSPAFCLTRPSQAQAVAVLHLA 244 R E + +C + + D+G LR+PQ TIATA++ +HRF+A +S H V+ T LFLA+KVEE PR+++D + GE + K+ D+R + P R E+KE V+ E+++L+ +GFDL PYR LL Y +S+ ++AW +NDS + A CL + A A L LA Sbjct: 61 RKKEEEYRIGSC-QFIQDSGRALRMPQLTIATALVFYHRFYAFKSYEHH----ERFVLSTTALFLASKVEETPRKLKDVV------------------------------GEALKNWNKHVKDYRVPE------------------PESREVHELKEKVLVTERILLQTIGFDLSIEHPYRPLLAYVKSITGTRDLAQIAWNFINDSYRTTA-CLQYSPRFVAAAALTLA 236 The following BLAST results are available for this feature:
BLAST of NO02G05390 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G05390 ID=NO02G05390|Name=NO02G05390|organism=Nannochloropsis oceanica|type=gene|length=1435bpback to top protein sequence of NO02G05390.1 >NO02G05390.1-protein ID=NO02G05390.1-protein|Name=NO02G05390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=350bpback to top Synonyms
Publications
|