NO02G05250, NO02G05250 (gene) Nannochloropsis oceanica

Overview
NameNO02G05250
Unique NameNO02G05250
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1071
Alignment locationchr2:1402869..1403939 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:1402869..1403939 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO02G05250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL018nonsL018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR003ngnoR003Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G05250.1NO02G05250.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G05250.1NO02G05250.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G05250 ID=NO02G05250|Name=NO02G05250|organism=Nannochloropsis oceanica|type=gene|length=1071bp
ATGGGGGGGGGGGAGTGGGTCAGGTATGAGAGGCCGCAGAGGCAGAGGAA
GAAGAGGAGGTGGGGGGATGAGGATAGTGAGGAGGAGCAGGAGATAGTGG
TGGAGGAGGACGAGGAGGAGGAGGAGGAGAGTGAGGAGGAGAGCTTGCGG
ATTTCGACGGCGAGTGAAGATGAACTTGATGATGATGATGATGATATGGA
GGAGGAGGAGGAGGAGAGAAAGAGGGGGGAAGGGGAAGAAGGTAAAGGAG
GAGAAAGTGGGGAGGTAGTGACGACGACGGCAGTGGAGGGAGGGAGGGAG
GTGGAGGTTGAGAAGAAGACTACTGAAGAATTGAAGGCGAAGGAGGAGGA
AAAAGAGCCAGCGCAGGAGCAGCCACAAGGTCAAGAAGACGGAAGACGAG
GTGGAGGAGGACGAGAAGGAGGGACAGGCAAGAAAGGAAGCGAGCAGCCG
TCGGTCTCGGTCCCAGCAGCCATGGATTTAGACAAGCAGGAGCGGGTTAT
CGAAGCATTGCCAGCAGCAGCGTCAACAGCAACAGCAGTAGCAGCAGCCG
CACTACCATTACCATCAGCAGCAGCAGTAGCAGCGGCAACAACAAAAATA
TCATTACCACCAGCAGCAGCAGTAGCAGGAGCAGTAGGAGGCAGAGGAAA
CCCAGCAAGAGAAGCTGCAGGACCACCACCTCCCCGATCTGAAGGAGCCG
GCGAGGCCTCGGCGGCCCATACTCAGGCAACAGAGGAAGACGGGGAAAAA
GAGGGGGAAGCTACTGTCGTTGCGGGGGAGGGAGGGGCGGCCGGGGAAGA
GGGAGAGGAGAAGAGAGGGGAGGTATTGCCATCTACGGGACCAGAAATGG
AGAGGGAGGTTAGAGGGGAGGTAGTGGTGGAGAGTATGACTTTTTGAGAA
AAAGGAGGAGAAGCGTGTGGCATGGTAAGGTAGCAGCAGCAGCGGCAATT
TGAGCAGCAGTAGCAGTTTGAGTAGCAGCTGCCGCACCACCAACACCAAC
AGGGGCAAAATCAATAGAGACAACCTAAAAATGAATAATGGGCGCAACAG
AAAACGGCAATACCAACTCCA
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protein sequence of NO02G05250.1

>NO02G05250.1-protein ID=NO02G05250.1-protein|Name=NO02G05250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=299bp
MGGGEWVRYERPQRQRKKRRWGDEDSEEEQEIVVEEDEEEEEESEEESLR
ISTASEDELDDDDDDMEEEEEERKRGEGEEGKGGESGEVVTTTAVEGGRE
VEVEKKTTEELKAKEEEKEPAQEQPQGQEDGRRGGGGREGGTGKKGSEQP
SVSVPAAMDLDKQERVIEALPAAASTATAVAAAALPLPSAAAVAAATTKI
SLPPAAAVAGAVGGRGNPAREAAGPPPPRSEGAGEASAAHTQATEEDGEK
EGEATVVAGEGGAAGEEGEEKRGEVLPSTGPEMEREVRGEVVVESMTF*
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Synonyms
Publications