NO02G05110, NO02G05110 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO02G05110 vs. NCBI_GenBank
Match: EWM30175.1 (hypothetical protein Naga_100096g18 [Nannochloropsis gaditana]) HSP 1 Score: 200.3 bits (508), Expect = 6.500e-48 Identity = 112/216 (51.85%), Postives = 131/216 (60.65%), Query Frame = 0 Query: 6 MEQ-DERVLFELADVEMSYGGSAMAPEGRGLLQVTSKCLLWKQQQQEE---------GVEGKVYKVDAPCITLHAISKDPSSFPKPCLYCQVSEGGEDEDEDEAKEIYFVPQDPESLSPLFEALSKAALMNPDPPEAEENEXXXXXXXXXXXXXXXXXXXXE----------------------------------QARVLSHLEGLMTFSPNLGA 178 MEQ DE +LFEL DVEMSYG S E RGLLQ+TSK L WK +++E+ + ++Y+ + PCITLHAISKDPSSFPKPCLYCQ+SEGGEDEDED +KE+YFVP+DPESL PLFEALS+AALMNPDPPEA ENE E Q R+L+HLEGL+TFSPNL A Sbjct: 1 MEQGDEELLFELVDVEMSYGSSTGPSERRGLLQITSKRLRWKARREEDEGTNLTADTDLGEELYEAEIPCITLHAISKDPSSFPKPCLYCQISEGGEDEDEDASKEVYFVPEDPESLGPLFEALSRAALMNPDPPEAGENEGDDELIFDQTSTDGASGASEEQYEAIKEMCRLCGFSHGQHRCIDLSSTVRLWVYAQGRMLAHLEGLLTFSPNLVA 216
BLAST of NO02G05110 vs. NCBI_GenBank
Match: CBJ33675.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 98.2 bits (243), Expect = 3.500e-17 Identity = 61/178 (34.27%), Postives = 90/178 (50.56%), Query Frame = 0 Query: 5 IMEQDERVLFELADVEMSYGGSAMAPEGRGLLQVTSKCLLWKQQQQEEGVEGKVYKVDAPCITLHAISKDPSSFPKPCLYCQVSEGGEDEDEDEAKEIYFVPQDPE--SLSPLFEALSKAALMNPDPPE---AEENEXXXXXXXXXXXXXXXXXXXXEQARVLSHLEGLMTFSPNLGA 178 ++++DE L + E++ S +PEG G L VT+ ++W + + K + D I LHAISKDP +FP PC+YCQ++ E+ED KE +F P D E +L LFEA SKAA +NP+P + E EQ RVL+HL+ ++ + A Sbjct: 23 VLDEDEGEEVLLRNEEVTLAFSPESPEGLGSLTVTTTRVVWLSSED----QSKAFDFDVAYICLHAISKDPGTFPNPCIYCQLAV----EEEDVLKEAFFAPSDGEAATLQALFEAFSKAAELNPEPGDEGAGAGEEEGLGGGAGGLVFDHGSALSAEQERVLAHLDSVLVVPEGMEA 192
BLAST of NO02G05110 vs. NCBI_GenBank
Match: CCA21975.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 85.9 bits (211), Expect = 1.800e-13 Identity = 50/132 (37.88%), Postives = 71/132 (53.79%), Query Frame = 0 Query: 8 QDERVLFELADVEMSYGGSAMAPE-----GRGLLQVTSKCLLWKQQQQEEGVEGKVYKVDAPCITLHAISKDPSSFPKPCLYCQVSEGGEDEDEDEAKEIYFVPQDPESLSPLFEALSKAALMNPDPPEAEE 135 + E VL DVE+S + P +G + VT++ +W + G Y D CITLHAIS+DP++FP PCLYCQ+ + ++A E+ FVP E L+ L+ A SK+A MNPD + E Sbjct: 28 EPEIVLDTFQDVELSINLFSSKPVDESVLNKGKVYVTTRRAIWISNTSSDTSRG--YSWDIKCITLHAISRDPAAFPVPCLYCQI-------EAEDATEVRFVPSQSEDLTRLYLAFSKSAEMNPDEEDVPE 150
BLAST of NO02G05110 vs. NCBI_GenBank
Match: CCI46131.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 83.2 bits (204), Expect = 1.200e-12 Identity = 51/132 (38.64%), Postives = 72/132 (54.55%), Query Frame = 0 Query: 8 QDERVLFELADVEMSYGGSAMAP-EG----RGLLQVTSKCLLWKQQQQEEGVEGKVYKVDAPCITLHAISKDPSSFPKPCLYCQVSEGGEDEDEDEAKEIYFVPQDPESLSPLFEALSKAALMNPDPPEAEE 135 + E VL DV+++ ++ P EG G + VTS+ +W + G Y D CITLHAIS+DP++FP PCLYCQ+ + + A E+ FVP E L+ L+ A SK+A MNPD + E Sbjct: 28 EPEIVLDTFDDVKLAICTNSCKPVEGSELSEGKVYVTSRRAVWIANTSTDAFRG--YSWDIKCITLHAISRDPTAFPVPCLYCQI-------EAENATEMRFVPSQSEDLTRLYLAFSKSAEMNPDEEDVPE 150
BLAST of NO02G05110 vs. NCBI_GenBank
Match: XP_002318279.1 (chloride conductance regulatory protein ICln [Populus trichocarpa] >PNT10847.1 hypothetical protein POPTR_012G128500v3 [Populus trichocarpa]) HSP 1 Score: 82.8 bits (203), Expect = 1.500e-12 Identity = 50/144 (34.72%), Postives = 73/144 (50.69%), Query Frame = 0 Query: 7 EQDERVLFELADVEMSYGGSAMAPEGRGLLQVTSKCLLWKQQQQEEGVEGKVYKVDAPCITLHAISKDPSSFPKPCLYCQVSEGGEDEDEDEAK--------------EIYFVPQDPESLSPLFEALSKAALMNPDPPEAEENE 137 E E + +V + G +PE G L +++K ++W +G +G Y VD I+LHA+S+DP ++P PC+Y Q+ E GEDEDE E E+ VP DP L LF+ + A +NP+P E E E Sbjct: 24 ENGEEFMLMCREVSIVIGNG--SPESPGTLYISTKKVVW--LSDVDGTKG--YAVDFLSISLHAVSRDPEAYPSPCIYTQI-ETGEDEDESEGSDSECSDALDLSKVTEMRLVPSDPSQLDTLFQVFCECAELNPEPVEDNEEE 160
BLAST of NO02G05110 vs. NCBI_GenBank
Match: XP_011029973.1 (PREDICTED: chloride conductance regulatory protein ICln-like [Populus euphratica]) HSP 1 Score: 82.4 bits (202), Expect = 2.000e-12 Identity = 49/144 (34.03%), Postives = 71/144 (49.31%), Query Frame = 0 Query: 7 EQDERVLFELADVEMSYGGSAMAPEGRGLLQVTSKCLLWKQQQQEEGVEGKVYKVDAPCITLHAISKDPSSFPKPCLYCQVSEGGEDEDEDEAK--------------EIYFVPQDPESLSPLFEALSKAALMNPDPPEAEENE 137 + E ++ +V + G +PE G L +++K +LW K Y VD I+LHA+S+DP ++P PC+Y Q+ E GEDEDE E E+ VP DP L LF+ + A +NP+P E E E Sbjct: 24 DNGEELMLMFREVSIVIGNG--SPESPGTLYISTKKVLWLSDVDRT----KGYAVDFLSISLHAVSRDPEAYPSPCIYTQI-ETGEDEDESEGSDSECSDALDLSKVTEMRLVPSDPSQLDTLFQVFCECAELNPEPVEDNEEE 160
BLAST of NO02G05110 vs. NCBI_GenBank
Match: CEM07851.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 82.0 bits (201), Expect = 2.600e-12 Identity = 48/147 (32.65%), Postives = 73/147 (49.66%), Query Frame = 0 Query: 3 ASIMEQDERVLFELADVEMSYGGSAMAPEGRGLLQVTSKCLLWKQQQQEEGVEGKVYKVDAPCITLHAISKDPSSFPKPCLYCQVS---------------EGGEDEDEDEAKEIYFVPQDPESLSPLFEALSKAALMNPDPPEAEE 135 A +++ DE + E + + GS EG+G L +TS+ ++W + K D P I LHAIS+DP +FP+PC+YCQ+ +D D E+ F+PQD L LF A+S+ A ++PDP +E Sbjct: 8 ALVLQPDESLTREQGGTRLWFNGS---DEGQGSLYITSQRVVWLSSDDRD----KGMAFDYPVIILHAISRDPQAFPQPCIYCQLKADRPXXXXXXXXXXXXXXXXDDFDALNEMRFIPQDETCLDDLFRAMSEMAALHPDPDMLQE 147
BLAST of NO02G05110 vs. NCBI_GenBank
Match: XP_020908068.1 (methylosome subunit pICln-like [Exaiptasia pallida] >KXJ25172.1 Methylosome subunit pICln [Exaiptasia pallida]) HSP 1 Score: 81.6 bits (200), Expect = 3.400e-12 Identity = 44/109 (40.37%), Postives = 62/109 (56.88%), Query Frame = 0 Query: 32 GRGLLQVTSKCLLWKQQQQEEGVEGKVYKVDAPCITLHAISKDPSSFPKPCLYCQVSEGGED--EDEDEAK--EIYFVPQDPESLSPLFEALSKAALMNPDPPEAEENE 137 G G L VT + L W EG+ + ++ P I++HA+ KD S FP C+YC + ED ED+++AK E+ FVP+D ESL +F LS ++PDP E E E Sbjct: 31 GNGTLYVTEERLSWSND------EGRGFSLEYPSISVHAVCKDTSKFPHECIYCMLDAPLEDCSEDDEDAKVGEVRFVPEDKESLQQIFNVLSDCQALHPDPQEEAEEE 133
BLAST of NO02G05110 vs. NCBI_GenBank
Match: PNT10848.1 (hypothetical protein POPTR_012G128500v3 [Populus trichocarpa]) HSP 1 Score: 81.6 bits (200), Expect = 3.400e-12 Identity = 52/145 (35.86%), Postives = 75/145 (51.72%), Query Frame = 0 Query: 7 EQDERVLFELADVEMSYGGSAMAPEGRGLLQVTSKCLLWKQQQQEEGVEGKVYKVDAPCITLHAISKDPSSFPKPCLYCQVSEGGEDEDEDEAK--------------EIYFVPQDPESLSPLFEALSKAALMNPDPPE-AEENE 137 E E + +V + G +PE G L +++K ++W +G +G Y VD I+LHA+S+DP ++P PC+Y Q+ E GEDEDE E E+ VP DP L LF+ + A +NP+P E AEE E Sbjct: 24 ENGEEFMLMCREVSIVIGNG--SPESPGTLYISTKKVVW--LSDVDGTKG--YAVDFLSISLHAVSRDPEAYPSPCIYTQI-ETGEDEDESEGSDSECSDALDLSKVTEMRLVPSDPSQLDTLFQVFCECAELNPEPVEDAEEME 161
BLAST of NO02G05110 vs. NCBI_GenBank
Match: OQR82171.1 (hypothetical protein THRCLA_11075 [Thraustotheca clavata]) HSP 1 Score: 81.3 bits (199), Expect = 4.400e-12 Identity = 52/166 (31.33%), Postives = 87/166 (52.41%), Query Frame = 0 Query: 11 RVLFELADVEMSYGGSAMAPEGRGLLQVTSKCLLWKQQQQEEGVEGKVYKVDAPCITLHAISKDPSSFPKPCLYCQVSEGGEDEDEDEAKEIYFVPQDP-ESLSPLFEALSKAALMNPDPPEAEENEXXXXXXXXXXXXXXXXXXXXEQARVLSHLEGLMTFSPNL 176 R+LF D E + + +G G L VT+K ++W ++ ++ G Y D P I+LHAIS+D SSFP+ CLYC + + ED+ E+ FVP+D ++L +F+A + +A +NPD +++ E Q + +HL+ ++ SP+L Sbjct: 31 RMLFSEYDEE---DEAVVIAKGSGNLVVTTKRIVWIAEEPQQNELG--YAWDTPYISLHAISRDTSSFPEACLYCHL------DIEDDVHEVRFVPEDSNKTLQAMFDAFAASAALNPDEDDSDNEE--------GEWIYNAEEIQGAQMDIAAHLDSVLHVSPSL 177 The following BLAST results are available for this feature:
BLAST of NO02G05110 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G05110 ID=NO02G05110|Name=NO02G05110|organism=Nannochloropsis oceanica|type=gene|length=3576bpback to top protein sequence of NO02G05110.1 >NO02G05110.1-protein ID=NO02G05110.1-protein|Name=NO02G05110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=229bpback to top Synonyms
Publications
|