NO02G05110, NO02G05110 (gene) Nannochloropsis oceanica

Overview
NameNO02G05110
Unique NameNO02G05110
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3576
Alignment locationchr2:1368435..1372010 -

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Properties
Property NameValue
Descriptionnucleotide-sensitive chloride conductance regulator (ICln) family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:1368435..1372010 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO02G05110 vs. NCBI_GenBank
Match: EWM30175.1 (hypothetical protein Naga_100096g18 [Nannochloropsis gaditana])

HSP 1 Score: 200.3 bits (508), Expect = 6.500e-48
Identity = 112/216 (51.85%), Postives = 131/216 (60.65%), Query Frame = 0
Query:    6 MEQ-DERVLFELADVEMSYGGSAMAPEGRGLLQVTSKCLLWKQQQQEE---------GVEGKVYKVDAPCITLHAISKDPSSFPKPCLYCQVSEGGEDEDEDEAKEIYFVPQDPESLSPLFEALSKAALMNPDPPEAEENEXXXXXXXXXXXXXXXXXXXXE----------------------------------QARVLSHLEGLMTFSPNLGA 178
            MEQ DE +LFEL DVEMSYG S    E RGLLQ+TSK L WK +++E+          +  ++Y+ + PCITLHAISKDPSSFPKPCLYCQ+SEGGEDEDED +KE+YFVP+DPESL PLFEALS+AALMNPDPPEA ENE                    E                                  Q R+L+HLEGL+TFSPNL A
Sbjct:    1 MEQGDEELLFELVDVEMSYGSSTGPSERRGLLQITSKRLRWKARREEDEGTNLTADTDLGEELYEAEIPCITLHAISKDPSSFPKPCLYCQISEGGEDEDEDASKEVYFVPEDPESLGPLFEALSRAALMNPDPPEAGENEGDDELIFDQTSTDGASGASEEQYEAIKEMCRLCGFSHGQHRCIDLSSTVRLWVYAQGRMLAHLEGLLTFSPNLVA 216          
BLAST of NO02G05110 vs. NCBI_GenBank
Match: CBJ33675.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 98.2 bits (243), Expect = 3.500e-17
Identity = 61/178 (34.27%), Postives = 90/178 (50.56%), Query Frame = 0
Query:    5 IMEQDERVLFELADVEMSYGGSAMAPEGRGLLQVTSKCLLWKQQQQEEGVEGKVYKVDAPCITLHAISKDPSSFPKPCLYCQVSEGGEDEDEDEAKEIYFVPQDPE--SLSPLFEALSKAALMNPDPPE---AEENEXXXXXXXXXXXXXXXXXXXXEQARVLSHLEGLMTFSPNLGA 178
            ++++DE     L + E++   S  +PEG G L VT+  ++W   +     + K +  D   I LHAISKDP +FP PC+YCQ++     E+ED  KE +F P D E  +L  LFEA SKAA +NP+P +       E                    EQ RVL+HL+ ++     + A
Sbjct:   23 VLDEDEGEEVLLRNEEVTLAFSPESPEGLGSLTVTTTRVVWLSSED----QSKAFDFDVAYICLHAISKDPGTFPNPCIYCQLAV----EEEDVLKEAFFAPSDGEAATLQALFEAFSKAAELNPEPGDEGAGAGEEEGLGGGAGGLVFDHGSALSAEQERVLAHLDSVLVVPEGMEA 192          
BLAST of NO02G05110 vs. NCBI_GenBank
Match: CCA21975.1 (conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 85.9 bits (211), Expect = 1.800e-13
Identity = 50/132 (37.88%), Postives = 71/132 (53.79%), Query Frame = 0
Query:    8 QDERVLFELADVEMSYGGSAMAPE-----GRGLLQVTSKCLLWKQQQQEEGVEGKVYKVDAPCITLHAISKDPSSFPKPCLYCQVSEGGEDEDEDEAKEIYFVPQDPESLSPLFEALSKAALMNPDPPEAEE 135
            + E VL    DVE+S    +  P       +G + VT++  +W      +   G  Y  D  CITLHAIS+DP++FP PCLYCQ+       + ++A E+ FVP   E L+ L+ A SK+A MNPD  +  E
Sbjct:   28 EPEIVLDTFQDVELSINLFSSKPVDESVLNKGKVYVTTRRAIWISNTSSDTSRG--YSWDIKCITLHAISRDPAAFPVPCLYCQI-------EAEDATEVRFVPSQSEDLTRLYLAFSKSAEMNPDEEDVPE 150          
BLAST of NO02G05110 vs. NCBI_GenBank
Match: CCI46131.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 83.2 bits (204), Expect = 1.200e-12
Identity = 51/132 (38.64%), Postives = 72/132 (54.55%), Query Frame = 0
Query:    8 QDERVLFELADVEMSYGGSAMAP-EG----RGLLQVTSKCLLWKQQQQEEGVEGKVYKVDAPCITLHAISKDPSSFPKPCLYCQVSEGGEDEDEDEAKEIYFVPQDPESLSPLFEALSKAALMNPDPPEAEE 135
            + E VL    DV+++   ++  P EG     G + VTS+  +W      +   G  Y  D  CITLHAIS+DP++FP PCLYCQ+       + + A E+ FVP   E L+ L+ A SK+A MNPD  +  E
Sbjct:   28 EPEIVLDTFDDVKLAICTNSCKPVEGSELSEGKVYVTSRRAVWIANTSTDAFRG--YSWDIKCITLHAISRDPTAFPVPCLYCQI-------EAENATEMRFVPSQSEDLTRLYLAFSKSAEMNPDEEDVPE 150          
BLAST of NO02G05110 vs. NCBI_GenBank
Match: XP_002318279.1 (chloride conductance regulatory protein ICln [Populus trichocarpa] >PNT10847.1 hypothetical protein POPTR_012G128500v3 [Populus trichocarpa])

HSP 1 Score: 82.8 bits (203), Expect = 1.500e-12
Identity = 50/144 (34.72%), Postives = 73/144 (50.69%), Query Frame = 0
Query:    7 EQDERVLFELADVEMSYGGSAMAPEGRGLLQVTSKCLLWKQQQQEEGVEGKVYKVDAPCITLHAISKDPSSFPKPCLYCQVSEGGEDEDEDEAK--------------EIYFVPQDPESLSPLFEALSKAALMNPDPPEAEENE 137
            E  E  +    +V +  G    +PE  G L +++K ++W      +G +G  Y VD   I+LHA+S+DP ++P PC+Y Q+ E GEDEDE E                E+  VP DP  L  LF+   + A +NP+P E  E E
Sbjct:   24 ENGEEFMLMCREVSIVIGNG--SPESPGTLYISTKKVVW--LSDVDGTKG--YAVDFLSISLHAVSRDPEAYPSPCIYTQI-ETGEDEDESEGSDSECSDALDLSKVTEMRLVPSDPSQLDTLFQVFCECAELNPEPVEDNEEE 160          
BLAST of NO02G05110 vs. NCBI_GenBank
Match: XP_011029973.1 (PREDICTED: chloride conductance regulatory protein ICln-like [Populus euphratica])

HSP 1 Score: 82.4 bits (202), Expect = 2.000e-12
Identity = 49/144 (34.03%), Postives = 71/144 (49.31%), Query Frame = 0
Query:    7 EQDERVLFELADVEMSYGGSAMAPEGRGLLQVTSKCLLWKQQQQEEGVEGKVYKVDAPCITLHAISKDPSSFPKPCLYCQVSEGGEDEDEDEAK--------------EIYFVPQDPESLSPLFEALSKAALMNPDPPEAEENE 137
            +  E ++    +V +  G    +PE  G L +++K +LW           K Y VD   I+LHA+S+DP ++P PC+Y Q+ E GEDEDE E                E+  VP DP  L  LF+   + A +NP+P E  E E
Sbjct:   24 DNGEELMLMFREVSIVIGNG--SPESPGTLYISTKKVLWLSDVDRT----KGYAVDFLSISLHAVSRDPEAYPSPCIYTQI-ETGEDEDESEGSDSECSDALDLSKVTEMRLVPSDPSQLDTLFQVFCECAELNPEPVEDNEEE 160          
BLAST of NO02G05110 vs. NCBI_GenBank
Match: CEM07851.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 82.0 bits (201), Expect = 2.600e-12
Identity = 48/147 (32.65%), Postives = 73/147 (49.66%), Query Frame = 0
Query:    3 ASIMEQDERVLFELADVEMSYGGSAMAPEGRGLLQVTSKCLLWKQQQQEEGVEGKVYKVDAPCITLHAISKDPSSFPKPCLYCQVS---------------EGGEDEDEDEAKEIYFVPQDPESLSPLFEALSKAALMNPDPPEAEE 135
            A +++ DE +  E     + + GS    EG+G L +TS+ ++W      +    K    D P I LHAIS+DP +FP+PC+YCQ+                     +D D   E+ F+PQD   L  LF A+S+ A ++PDP   +E
Sbjct:    8 ALVLQPDESLTREQGGTRLWFNGS---DEGQGSLYITSQRVVWLSSDDRD----KGMAFDYPVIILHAISRDPQAFPQPCIYCQLKADRPXXXXXXXXXXXXXXXXDDFDALNEMRFIPQDETCLDDLFRAMSEMAALHPDPDMLQE 147          
BLAST of NO02G05110 vs. NCBI_GenBank
Match: XP_020908068.1 (methylosome subunit pICln-like [Exaiptasia pallida] >KXJ25172.1 Methylosome subunit pICln [Exaiptasia pallida])

HSP 1 Score: 81.6 bits (200), Expect = 3.400e-12
Identity = 44/109 (40.37%), Postives = 62/109 (56.88%), Query Frame = 0
Query:   32 GRGLLQVTSKCLLWKQQQQEEGVEGKVYKVDAPCITLHAISKDPSSFPKPCLYCQVSEGGED--EDEDEAK--EIYFVPQDPESLSPLFEALSKAALMNPDPPEAEENE 137
            G G L VT + L W         EG+ + ++ P I++HA+ KD S FP  C+YC +    ED  ED+++AK  E+ FVP+D ESL  +F  LS    ++PDP E  E E
Sbjct:   31 GNGTLYVTEERLSWSND------EGRGFSLEYPSISVHAVCKDTSKFPHECIYCMLDAPLEDCSEDDEDAKVGEVRFVPEDKESLQQIFNVLSDCQALHPDPQEEAEEE 133          
BLAST of NO02G05110 vs. NCBI_GenBank
Match: PNT10848.1 (hypothetical protein POPTR_012G128500v3 [Populus trichocarpa])

HSP 1 Score: 81.6 bits (200), Expect = 3.400e-12
Identity = 52/145 (35.86%), Postives = 75/145 (51.72%), Query Frame = 0
Query:    7 EQDERVLFELADVEMSYGGSAMAPEGRGLLQVTSKCLLWKQQQQEEGVEGKVYKVDAPCITLHAISKDPSSFPKPCLYCQVSEGGEDEDEDEAK--------------EIYFVPQDPESLSPLFEALSKAALMNPDPPE-AEENE 137
            E  E  +    +V +  G    +PE  G L +++K ++W      +G +G  Y VD   I+LHA+S+DP ++P PC+Y Q+ E GEDEDE E                E+  VP DP  L  LF+   + A +NP+P E AEE E
Sbjct:   24 ENGEEFMLMCREVSIVIGNG--SPESPGTLYISTKKVVW--LSDVDGTKG--YAVDFLSISLHAVSRDPEAYPSPCIYTQI-ETGEDEDESEGSDSECSDALDLSKVTEMRLVPSDPSQLDTLFQVFCECAELNPEPVEDAEEME 161          
BLAST of NO02G05110 vs. NCBI_GenBank
Match: OQR82171.1 (hypothetical protein THRCLA_11075 [Thraustotheca clavata])

HSP 1 Score: 81.3 bits (199), Expect = 4.400e-12
Identity = 52/166 (31.33%), Postives = 87/166 (52.41%), Query Frame = 0
Query:   11 RVLFELADVEMSYGGSAMAPEGRGLLQVTSKCLLWKQQQQEEGVEGKVYKVDAPCITLHAISKDPSSFPKPCLYCQVSEGGEDEDEDEAKEIYFVPQDP-ESLSPLFEALSKAALMNPDPPEAEENEXXXXXXXXXXXXXXXXXXXXEQARVLSHLEGLMTFSPNL 176
            R+LF   D E     + +  +G G L VT+K ++W  ++ ++   G  Y  D P I+LHAIS+D SSFP+ CLYC +      + ED+  E+ FVP+D  ++L  +F+A + +A +NPD  +++  E                     Q  + +HL+ ++  SP+L
Sbjct:   31 RMLFSEYDEE---DEAVVIAKGSGNLVVTTKRIVWIAEEPQQNELG--YAWDTPYISLHAISRDTSSFPEACLYCHL------DIEDDVHEVRFVPEDSNKTLQAMFDAFAASAALNPDEDDSDNEE--------GEWIYNAEEIQGAQMDIAAHLDSVLHVSPSL 177          
The following BLAST results are available for this feature:
BLAST of NO02G05110 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30175.16.500e-4851.85hypothetical protein Naga_100096g18 [Nannochlorops... [more]
CBJ33675.13.500e-1734.27conserved unknown protein [Ectocarpus siliculosus][more]
CCA21975.11.800e-1337.88conserved hypothetical protein [Albugo laibachii N... [more]
CCI46131.11.200e-1238.64unnamed protein product [Albugo candida][more]
XP_002318279.11.500e-1234.72chloride conductance regulatory protein ICln [Popu... [more]
XP_011029973.12.000e-1234.03PREDICTED: chloride conductance regulatory protein... [more]
CEM07851.12.600e-1232.65unnamed protein product [Vitrella brassicaformis C... [more]
XP_020908068.13.400e-1240.37methylosome subunit pICln-like [Exaiptasia pallida... [more]
PNT10848.13.400e-1235.86hypothetical protein POPTR_012G128500v3 [Populus t... [more]
OQR82171.14.400e-1231.33hypothetical protein THRCLA_11075 [Thraustotheca c... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G05110.1NO02G05110.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100096g18gene490Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G05110.1NO02G05110.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G05110 ID=NO02G05110|Name=NO02G05110|organism=Nannochloropsis oceanica|type=gene|length=3576bp
CCCTTTCTCGCCCTCCCCCCTCCCTCACCCTCCTTCATCTCAATACGCTA
CTCCCCCCCTCCGCCACCACCTTGCTCTTCCCCAAAAACGCACCGAGCTT
CGTCACCAGCGTAGGAGGCCACCTCCGTATCCGTTGAACAAAATCCAAAT
CTCTATAAGCCGCACACCCCGTACTCGTGTTCTCACATGCAAACCTCCAT
TCCTTTTCCGCCAACCCAAGCTTCCCCTCCCCCCACGCATGGGCTGCCAA
CGCCACGTGCATATCCGTGAAGCCGGGCTGTCGCCTGATCACGTCATTCA
TTAACTTTAATGCAGATTCCTCATACCCCAGTTCATAGTACGTCAACGCC
GCGTTCGCCCGGGCCAGCAACGCATCCTCCTCATCTCTCGACGCCAGAAA
TAAATCCGCAGACGCCTCGAAGTCCTGCAAGGCATCTTTGTACTTCCCCA
GCCTCGTCAATACATTCCCACGAAAAGTGAGCACAAAGGGATTGATTCCC
TCTCCTCGCCCCCCGCCCCAGAGAGAGATGGCTTGGCTGTAGTCCTCAAC
GGCGGCTTGCCACTCGCTCAGTCCCTCCTGTCAGTCGTAGCATGGGCCAG
AATGAAGGAGGAGAGAAGGGGTGAATGATCGCTCCAAATGTAGGGAAATA
GACAGTCTCATGAAGAAATGCGATCCTTGCCATCCATCCTTCTCTCTCGA
CCATCATGTTTCCCTTCCTCTCCTACCCCCATTGACGTACCCTCGCCAAG
CCCCGCTGCACGAACAGATCTGGATACTCTGAATAAGCCGCTTCCCCACT
TCCGTCCGTCTTGGTCCCGTCCACGCTCATGATCGTCAAAACCCTGTCAA
AATCAACTATGGCCGCATCAAATTTCTTGAGGTCCACTTTAACGTTCCCA
CGGGCTTTGATCAACGCTGCCATCTCGTCTCTGGGCCGTTCCAATTTCTC
CCAAACAGCCACCGACTTATCGAACAAAGATTCGGCCAGGCGTAAGTCTC
GGTCATTGAACGCTTGAAAGGCACGTTGAACTTGCTGGATCTGCGCGGGG
GACGGTTCGGCAGCCGAGGCCTGGAGGGGGGAGGTGAGGAGGGGTCCAAA
AGCGCCGCTGCAGCCACCAAGAAAGAGGAGGCTGATCTTAAAGGCAGCTT
TATGAAGTGAGGTGGACAAGAGAAAGGACAAGGGACTGGAAGTCAGTTGG
GGATGGAGCGGGTGCCAGGTACTTGAGCTGGTAGAGGCGTGCGTGGCGGC
ATAGGTCGCAGTCGGAAGGGGCGTCCGGCCGCGGGAGGAAGCACCCGCAC
ACGCGCGCGGAGCAAAGCAGATCGAAGGCTGGGGGAGGGACGTGACTAAC
CCTAGTATTAGGCATGTCCAGGACAAATTGTACCGCCGTGGCTGTGTCGG
TGATGGCATCTTACTGTGTTGAAGACGAGAGAGAGGGGAGGAGAGGCGGT
GAAGTGATGAATCAATCGCGATGGAAGCTGCCATCTTTGCCGCTTCTTGG
TGCTGCTATTCATAGTGGGCACCATAAAGGCGCGAGTAGCTGTATTACTA
GGAGCGGATTGGAAAGAATTGTGTTTTACAGGCGTCATGTCCTGCGTCAG
GCCAATCACGAACGACGAACGCAACAAAACGTCCGATGAGTGTCTCGCGC
GACCCCATTGAGCATAGCAGAGTCTGGCATCATTTTCCATACGGTGTGCC
ATAAGAAATCTGCAACTTTTTCGTCACAAAATTGGATGCGCTGTAGCAAT
TTTTCCCTGAAGACGTAGGCGCAATTTGGTCCTCGTTCGTCCCAGGAATG
CAATGCCTTGAAGGATGTTAGACACGCCACCCGCTTCCTTTCCCTTTGTG
TGGGCTACATTTTGTCCACTGTCAAAACTCAGAGATGTTGTATTATGTTT
CTTCGAATCATGCTTGTGTGCTTTATTAGTAAACGGCTAACTGACCATTT
GGGTCATGCGAGGACGCAAAGCATGGTTGTGTTTCTTGAATGGTTCGCGA
TGGGTGCGATGGGCCTGACCTCCTCTCCCCCCTCTTCTTTCTTCCCCTCC
AAGCGGACGATGCACACTCTTGTGATTCGCCTCGGCCCTTTAACCTCATG
CTGCCCACTGCACTCACATATGCACAGGCACCAAGTTTTCAACACCGACG
CAACGAATGGCGGCTTCAATCATGGAGCAGgtaagcagtacaagtccctg
agtagcgaatcatatctaaccctctcacgcctcaactccttcataccacc
gctctcccgtagGACGAGCGAGTCTTGTTCGAGCTGGCCGACGTAGAAAT
GTCGTATGGGGGCAGTGCCATGGCACCGGAAGGCCGGGGCCTGTTGCAAG
TAACGTCAAAATGCCTTCTATGGAAGCAGCAGCAGCAAGAGGAAGGGGTC
GAGGGCAAGGTTTACAAGGTAGATGCCCCTTGCATCACCCTCCATGCTAT
TTCCAAAGATCCTTCATCTTTTCCGAAGCCATGTTTGTACTGCCAGgtat
gcgatggatggacgggctgagaggtcgaagcgggaagggaagatgggtac
ctttctcaaggagaagacctcgataatatccttccttatccagaatgcct
tcccgcctttttatcaccactgcagGTCTCAGAAGGTGGGGAAGATGAGG
ACGAGGACGAGGCCAAAGAGATCTACTTCGTGCCGCAGGACCCAGAGAGT
Cgtaagtgtttgctcatgcgtgccctggttagatggtatgcgataattgc
agaacccattcaaccctatcctcccgttttcgaagagatgttccattaaa
tatatggactttcatatagtgtctgcagcattcatatcctggtctcgccg
catccgtcatctcgtgcatatttactcacatcttgcaatttcctcccctt
cattcagTGAGTCCTCTCTTCGAGGCGCTTTCCAAGGCAGCTTTAATGAA
CCCTGACCCTCCAGAGGCCGAAGAAAATGAGGGCGACGATGATTTAATTT
TTGACCAGAGCGCCTTTGCTGCCGCGGGGGGCGCGTCGGAAGAACAGgta
ggaggagatggatggttgcttgtcagtgacggtcgatgaagctctcaatt
tgttgacgtgtgtgtaacaaaagatgatgtaggctacgactgcgtgatga
cattcaactggcttacaaatgattctcattctaacacttccaataaccat
ctcatagGCCCGTGTGCTGTCTCACCTCGAGGGACTCATGACCTTTAGCC
CCAATTTGGGCGCGGCGGCAGGCGGGCAATTCGACGACGTCGAAGAGGAG
GAAGAAGAAGGTACCGCGGCAGCAGCGGCGGCTACGGATGGTGAAAGCGA
GAGAGGAGGAGCAGGAGAAGAGGAAGAGGGAGCGGGAGGGATGAATGGGC
ATAACGGCATAGCTCAGTAGAGACTGGTAGAGTTACGTCACGAATCAAAA
AAAGGCATTTACTAATTTGAGGGCTTATGCAACTTGCCTTCCTCTATTCT
TCCGTGTGCGCGTGGGCCCTATTACCCAGCACTGTCTCGCCTTGTCCTAT
TAGAACCAATTATCCAGTCCCTTCGT
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protein sequence of NO02G05110.1

>NO02G05110.1-protein ID=NO02G05110.1-protein|Name=NO02G05110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=229bp
MAASIMEQDERVLFELADVEMSYGGSAMAPEGRGLLQVTSKCLLWKQQQQ
EEGVEGKVYKVDAPCITLHAISKDPSSFPKPCLYCQVSEGGEDEDEDEAK
EIYFVPQDPESLSPLFEALSKAALMNPDPPEAEENEGDDDLIFDQSAFAA
AGGASEEQARVLSHLEGLMTFSPNLGAAAGGQFDDVEEEEEEGTAAAAAA
TDGESERGGAGEEEEGAGGMNGHNGIAQ*
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Synonyms
Publications