NO02G05080, NO02G05080 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO02G05080 vs. NCBI_GenBank
Match: EWM30167.1 (hypothetical protein Naga_100096g15 [Nannochloropsis gaditana]) HSP 1 Score: 332.8 bits (852), Expect = 1.000e-87 Identity = 159/238 (66.81%), Postives = 188/238 (78.99%), Query Frame = 0 Query: 37 RAVSLPRHNPSWAFQTAVSETLQRRGYIEALWDALVDGDKATHRPPIPCEVLPLILHYAASFKEVALSKEEHIQLSNGDYLYLTHPIPFELHGYEVVGAQILVTSHDQGWSSEFPHLKGTYIGSYTWGEAVVVESGAPTGVTEGGSQRVVLAQEVYRNLHAVKTWQTHEKSFVVSECVGDGVGVGCGGCMEERRQSDGGHIVAALRPGRALTLKLHAMYAGWVNHTRWAQITVQYLKV 275 R + L RHNP WAFQTAVSE L+RRGYI+ALWDAL +GDK++HR P+PCEVLPLILH+A S+KE+ LSKEE +++SNG++ YLTHPIP LHG++VVGA+I VTSHDQGWSSE PHL+GTYIGSYTWGEA+VVES +PT TE G RVV+ EVYRNLHAVK WQTHEK+FV G G EE QSDGG +++ALRPGRAL L LHA Y GW N T+ A IT+QYL+V Sbjct: 45 RPMRLSRHNP-WAFQTAVSEALKRRGYIDALWDALSNGDKSSHRAPVPCEVLPLILHFAGSYKEMTLSKEEPVRISNGNFAYLTHPIPTNLHGHQVVGARISVTSHDQGWSSEHPHLRGTYIGSYTWGEALVVESSSPTSTTEQGIPRVVVGTEVYRNLHAVKIWQTHEKTFVGPLASPRGKGQVDEESKEEGVQSDGGDLISALRPGRALALHLHAQYPGWTNFTQGAHITIQYLRV 281
BLAST of NO02G05080 vs. NCBI_GenBank
Match: XP_007801165.1 (hypothetical protein EPUS_03032 [Endocarpon pusillum Z07020] >ERF73191.1 hypothetical protein EPUS_03032 [Endocarpon pusillum Z07020]) HSP 1 Score: 70.1 bits (170), Expect = 1.200e-8 Identity = 62/199 (31.16%), Postives = 100/199 (50.25%), Query Frame = 0 Query: 80 RPPIPCEVLPLILHYAASFKEVALSKEE---HIQLSNGDYLYLTHPIPFELHGYEVV-GAQILVTSHDQGWSSEFPHLKGTYIGSYTWGEAVVVESGAPTGVTEGGSQRVVLAQEVYRNLHAVKTWQTHEKSFVVSECVGDGVGVGCGGCMEERRQSDGGHIVAALRPGRALTLKLHAMYAGWVNHTRWAQITVQYLKV 275 R + +++P+IL +A + S +E ++Q + G YL+ + + G ++ +I VTSHDQGWSS FP GTY GS+TW EA V +G+ V E + V +E+ RN+HA T +TH ++ + DG ER +V +L PG ++++ A + GW N+ A + V + V Sbjct: 54 RQILVADLIPIILDFAEYWPRTTYSCQESKTYVQHTAG-RPYLSAVLSNAVCGPRMIRKIEIHVTSHDQGWSS-FPQDHGTYNGSWTWFEAEVRSAGS---VGEDEDEHCV-KKELCRNVHADATDKTHTTTWRY-DAEDDG----------ER------DLVRSLGPGSSISVVPWARFPGWQNYVTCASVDVYAVAV 229
BLAST of NO02G05080 vs. NCBI_GenBank
Match: XP_008604077.1 (hypothetical protein SDRG_00382 [Saprolegnia diclina VS20] >EQC42654.1 hypothetical protein SDRG_00382 [Saprolegnia diclina VS20]) HSP 1 Score: 65.9 bits (159), Expect = 2.300e-7 Identity = 55/199 (27.64%), Postives = 85/199 (42.71%), Query Frame = 0 Query: 83 IPCEVLPLILHYAASFKEVALSKEEHIQL-SNGDYLYLT-----HPIPFELHGYEVVGAQILVTSHDQGWSSEFPHLKGTYIGSYTWGEAVVVESGAPTGVTEGGSQRVVLAQEVYRNLHAVKTWQTHEKSFVVSECVGDGVGVGCGGCMEERRQSDGGHIVAALRPGRALTLKLHAMYAGWVNHTRWAQITVQYLKVA 276 +P + IL + EV ++ ++ +N YL LT HP + + V I SHDQGW+++ HL G+Y G ++W E V AP G VV ++ YRNL A ++ H + + H+ A PG +T+ L A + GW N R+A++ + Y KVA Sbjct: 146 LPVATINAILDRLTLYHEVETTRTLNVSAPANVQYLQLTVPALEHP---AITRTQCVALVIECDSHDQGWATDASHLNGSYRGCHSWVELQVT---APNGSV------VVPRRDAYRNLRAHSAFRRHLVHITDTSVL--------------------AHLTA---PGSRVTVHLRAQFPGWRNEARFARLAIAY-KVA 308
BLAST of NO02G05080 vs. NCBI_GenBank
Match: XP_017992956.1 (hypothetical protein Malapachy_2676 [Malassezia pachydermatis] >KOS15324.1 hypothetical protein Malapachy_2676 [Malassezia pachydermatis]) HSP 1 Score: 65.5 bits (158), Expect = 3.000e-7 Identity = 57/205 (27.80%), Postives = 90/205 (43.90%), Query Frame = 0 Query: 80 RPPIPCEVLPLILHYAASFKEVALSKE---EHIQLSNGDYLYLTHPIPFELHGYEVVGAQILVTSHDQGWSSEFPHLK--GTYIGSYTWGE------AVVVESGAPTG---VTEGGSQRVVLAQEVYRNLHAVKTWQTHEKSFVVSECVGDGVGVGCGGCMEERRQSDGGHIVAALRPGRALTLKLHAMYAGWVNHTRWAQITVQ 271 R +P E+L + +A ++ +S+ + +N YLY T P+ LH ++ ++ + SHDQGWSSE P+ GTY GSYTW + A +S A TG + + + QE+ RN+HA ++ H + S IV +PG L + + + GW+N R A I V+ Sbjct: 88 RKGLPPELLRRVDAFADEGYDLCVSRSFLGMYTNNANTRYLY-TPPLASSLHHGCLLRVEVEMDSHDQGWSSE-PNRSWLGTYQGSYTWWDLTLERPAQAAQSSAETGSDTEEDVPAWTEIHRQELCRNIHASDAFKVHTITLDTS-----------------------SPIVQDAQPGDRLCVWVRTQFPGWINFARHASIRVR 267
BLAST of NO02G05080 vs. NCBI_GenBank
Match: XP_012208855.1 (hypothetical protein SPRG_14337 [Saprolegnia parasitica CBS 223.65] >KDO20465.1 hypothetical protein SPRG_14337 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 64.7 bits (156), Expect = 5.100e-7 Identity = 51/199 (25.63%), Postives = 84/199 (42.21%), Query Frame = 0 Query: 83 IPCEVLPLILHYAASFKEVALSKEEHIQL-SNGDYLYLT-----HPIPFELHGYEVVGAQILVTSHDQGWSSEFPHLKGTYIGSYTWGEAVVVESGAPTGVTEGGSQRVVLAQEVYRNLHAVKTWQTHEKSFVVSECVGDGVGVGCGGCMEERRQSDGGHIVAALRPGRALTLKLHAMYAGWVNHTRWAQITVQYLKVA 276 +P + +L + EV ++ ++ +N YL LT HP + + V + SHDQGW+++ HL G+Y G ++W E V AP G V+ ++ RNL A ++ H +D G + + PG +T+ L A + GW N R+A++ + Y KVA Sbjct: 1153 LPVATINAMLDRLTIYHEVETTRTLNVSAPANAPYLQLTVPALEHP---AITRTQCVALVVECDSHDQGWATDASHLNGSYRGCHSWVELHVT---APNGTV------VIPRRDACRNLRARSAFRRHLLHI-----------------------TDTGMLAHLVAPGTRVTVSLRAQFPGWSNEARFARLAIAY-KVA 1315 The following BLAST results are available for this feature:
BLAST of NO02G05080 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 5
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G05080 ID=NO02G05080|Name=NO02G05080|organism=Nannochloropsis oceanica|type=gene|length=962bpback to top protein sequence of NO02G05080.1 >NO02G05080.1-protein ID=NO02G05080.1-protein|Name=NO02G05080.1|organism=Nannochloropsis oceanica|type=polypeptide|length=276bpback to top Synonyms
Publications
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