NO02G04860, NO02G04860 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G04860 vs. NCBI_GenBank
Match: XP_005853461.1 (hypothetical protein NGA_0456400, partial [Nannochloropsis gaditana CCMP526] >EKU22898.1 hypothetical protein NGA_0456400, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 287.0 bits (733), Expect = 1.100e-73 Identity = 143/202 (70.79%), Postives = 164/202 (81.19%), Query Frame = 0 Query: 125 ITPILRDTFDCTGFFCPFRTFGVEALVPSXXXXXXXXXXXXXXXXXXPLLLYLPGLDGSGLTAFVQYPALAAEFEVRCLTMPNTDRSTFMDLVHLVRTELRSFPHRQVFLMGESFGGLLALGTALERINRPDARESTTEIKGVVLVNPATSYSRTIWAKFGQAITKLPEPFYGLSLLPIGLLLVDAGQIQSVIKDAFGRLRE 327 +TP+LR+TFD TGFFCPFRTFGV+AL P+ PLLLYLPGLDGSGLTAFVQYP+LA FEVRC+TMP TDRS+F+DL+HLVRTE+RSFP R+VF+MGESFGGLLALGT LER RPD R+ T +I+GVVLVNPATS+SRTIW K G ITKLP+PFY LSLLPIGLLLVD GQI+ +IKDAF RL+E Sbjct: 501 LTPVLRETFDRTGFFCPFRTFGVQALAPA-------------SSPSKPLLLYLPGLDGSGLTAFVQYPSLAEAFEVRCMTMPTTDRSSFLDLIHLVRTEIRSFPGRRVFVMGESFGGLLALGTVLERTKRPDVRD-TADIQGVVLVNPATSFSRTIWGKVGPLITKLPQPFYSLSLLPIGLLLVDGGQIKGLIKDAFVRLQE 688
BLAST of NO02G04860 vs. NCBI_GenBank
Match: CEL99693.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 193.7 bits (491), Expect = 1.300e-45 Identity = 107/296 (36.15%), Postives = 166/296 (56.08%), Query Frame = 0 Query: 172 PLLLYLPGLDGSGLTAFVQYPALAAEFEVRCLTMPNTDRSTFMDLVHLVRTELRSFPHRQVFLMGESFGGLLALGTALERINRPDARESTTEIKGVVLVNPATSYSRTIWAKFGQAITKLPEPFYGLSLLPIGLLLVDAGQIQSVIKDAFGRLREISSVXXXXXXXXXXXXXADQRARMAAL--GLSPFQIEFFSAALPVLIERLNL-LPAPCLEWRLLQWLGAGSEMVEPQLHRIKTPVLVVAGTVDRLLPSFEEAKRLKRELTD--CQIHFVEGAGHGGSLDQRVQLLEILKGW 463 PL+LYLPG+DG+G +AF Q+P L+ EF++ CL++ DRST +LV + L P R +L+GESFG ++AL A E P ++ E++GV++VNPATS+ R+ W + + ++P +G++LLP+ VD + +++DA + + I R M L +P + F A+P++I L + LP WRL +WL G+ M EP L + PVL+VAG DRLLPS EE +RL + L + ++H V G GH G+L+ + L +++ W Sbjct: 94 PLMLYLPGMDGTGFSAFTQFPFLSEEFDLTCLSITANDRSTVQELVQATLSHLHQSPPRPFYLLGESFGAVVALLVAHEIEKAP--KDFPGELRGVIIVNPATSFLRSWWRNYQAFLDRVPSFLFGVALLPLVFSSVDVTLARDLVQDALMKAKRI-----------PRWLKGQPRKEMMELQERTTPAHMSFLRKAVPIVIRILTVPLPPDTFRWRLREWLREGATMAEPILPHVHAPVLIVAGEGDRLLPSREEGERLLKVLPNPSNRLHSVRGGGHAGTLNVPLNLRALIRDW 376
BLAST of NO02G04860 vs. NCBI_GenBank
Match: XP_005649570.1 (alpha/beta-hydrolase [Coccomyxa subellipsoidea C-169] >EIE25026.1 alpha/beta-hydrolase [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 146.4 bits (368), Expect = 2.300e-31 Identity = 97/294 (32.99%), Postives = 150/294 (51.02%), Query Frame = 0 Query: 172 PLLLYLPGLDGSGLTAFVQYPALAAEFEVRCLTMPNTDRSTFMDLVHLVRTEL-----RSFPHRQVFLMGESFGGLLALGTALERINRPDARESTTEIKGVVLVNPATSYSRTIWAKFGQAITKLPEPFYGLSLLPIGLLLVDAGQIQSVIKDAFGRLREISSVXXXXXXXXXXXXXADQRARMAALGLSPFQIEFFSAALPVLIERLNLLPAPCLEWRLLQWLGAGSEMVEPQLHRIKTPVLVVAGTVDRLLPSFEEAKRLKRELTDCQIHFVEGAGHGGSLDQRVQLLEILK 461 PL++YLPG+DG+GL A Q+P L F++ L++P DR+ F L+ L+ + +S P R V+L+GESFGG+LAL A RPD + VVLVNPATS+SR++W G + ++P+ YG +P+ L + I + AFG A + + A G + +P L +LP P L+W+ L+ L G+ + P+L + VL++ G+ D LLPS EE RL++ L C++ ++G H + + L+ ILK Sbjct: 78 PLMVYLPGIDGTGLAASRQFPFLVDAFDLHALSIPGADRTPFEGLISLIEEYMDLVVSQSPPERPVYLLGESFGGVLALAVAEA---RPDL------VDRVVLVNPATSFSRSLWPALGPFLPRVPKELYG--SVPVALAPILGNPI---LLAAFG-----------------VDTSAPLQDQAVAFGQGVVSL------IPQLQALTEILPPPTLQWK-LKLLEEGNRQLAPKLKDVNQRVLLLVGSGDLLLPSGEEGPRLEKLLPRCRLKVMQGRSHALLQEAGINLVSILK 333
BLAST of NO02G04860 vs. NCBI_GenBank
Match: GAX21913.1 (hypothetical protein FisN_30Hh116 [Fistulifera solaris]) HSP 1 Score: 143.7 bits (361), Expect = 1.500e-30 Identity = 99/301 (32.89%), Postives = 146/301 (48.50%), Query Frame = 0 Query: 172 PLLLYLPGLDGSGLTAFVQYPALAAEFEVRCLTMPNTDRSTFMDLVHLVRTELRS---FPHRQVFLMGESFGGLLALGTALERINRPDARESTTEIKGVVLVNPATSYSRTIWAKFGQAITKLPEPFYGLSLLPIGLLLVDAGQIQSVIKDAFGRLREISSVXXXXXXXXXXXXXADQRARMAALGLSPFQIEFFSAALPVLIERLNLLPAPCLEWRLLQWLGAGSEMVEPQLHRI-----KTPVLVVAGTVDRLLPSFEEAKRLKRELTDCQIHFVEGAGHGGSLDQRVQLLEILKGWAP 465 PLLLYLPG DG+ L F+Q+P L F+VRC+T+ +DRS+F L V ++ R ++LMGESFGGLLA AL+ + D+ + + +KG+ L+NPATSY R+ A+ G + +LP Y LL + L D Q ++ + + SV D R A +G F +LP++I + L+WRL WL G + + +LH + L+V G D LPS EEA RL+ L + + + AGH + R L ++ P Sbjct: 33 PLLLYLPGFDGTFLCPFLQFPELGTIFDVRCMTISTSDRSSFAQLTECVLQYIQQETMTMRRPIYLMGESFGGLLACNVALQIAS--DSHQLSDLLKGLALINPATSYDRSRLAREGPPVAQLPWWNYPAGLLQLLPLFTDEHSFQQLL--LILTAQALPSV-------------IDNPMREAYMGRVAF-------SLPLVIPTVT---PSTLDWRLHAWLQTGCQYMTTRLHTLSDVHPNLRTLIVVGERDETLPSSEEAIRLQEILPNPCVRVIPDAGHASTCGSRADLAAYMRSHFP 306
BLAST of NO02G04860 vs. NCBI_GenBank
Match: GAX78319.1 (hypothetical protein CEUSTIGMA_g5761.t1 [Chlamydomonas eustigma]) HSP 1 Score: 143.7 bits (361), Expect = 1.500e-30 Identity = 103/297 (34.68%), Postives = 145/297 (48.82%), Query Frame = 0 Query: 172 PLLLYLPGLDGSGLTAFVQYPALAAEFEVRCLTMPNTDRSTFMDLV----HLVRTELRSFPH-RQVFLMGESFGGLLALGTALERINRPDARESTTEIKGVVLVNPATSYSRTIWAKFGQAITKLPEPFYGLSLLPIGLLLVDAGQIQSVIKDAFGRLREISSVXXXXXXXXXXXXXADQRARMAALGLSPFQIEFFSAALPVLIERLNL----LPAPCLEWRLLQWLGAGSEMVEPQLHRIKTPVLVVAGTVDRLLPSFEEAKRLKRELTDCQIHFVEGAGHGGSLDQRVQLLEIL 460 PL+LYLPG+DG+GL A+ Q+P L+ F++R L MP DR+ F DLV L+ +L H R V+L+GESFGGL+AL A E + VVLVNPATS+S + W FG A+T LP Y + LPI L + I + + A ++ +SV P Q+ + L L+ L + LP L WR LQ L GS V L ++ L++ G DRL+PS E RLKR + C++ + G H + V ++ I+ Sbjct: 140 PLILYLPGIDGTGLAAYRQFPYLSERFDLRALFMPPNDRTPFKDLVLKVKDLLEEQLEGMSHSRPVYLLGESFGGLMALAVAKE----------CPAVDRVVLVNPATSFSDSPWPLFGPALTALPTEVY--NTLPIAL----SPLITNPVAIAMHGVKRDTSV--------------------------PRQVSDLAYGLIELLPELQIMRLVLPPATLAWR-LQLLKEGSTYVNGVLGQVPQRTLLLTGQEDRLIPSASEGPRLKRMMQRCRLKSLSGRSHALLQEAGVNVVRIM 393
BLAST of NO02G04860 vs. NCBI_GenBank
Match: GAX13821.1 (hypothetical protein FisN_30Lh116 [Fistulifera solaris]) HSP 1 Score: 142.1 bits (357), Expect = 4.300e-30 Identity = 99/292 (33.90%), Postives = 137/292 (46.92%), Query Frame = 0 Query: 172 PLLLYLPGLDGSGLTAFVQYPALAAEFEVRCLTMPNTDRSTFMDLVHLVRTELRS---FPHRQVFLMGESFGGLLALGTALERINRPDARESTTEIKGVVLVNPATSYSRTIWAKFGQAITKLPEPFYGLSLLPIGLLLVDAGQIQSVIKDAFGRLREISSVXXXXXXXXXXXXXADQRARMAALGLSPFQIEFFSAALPVLIERLNLLPAPCLEWRLLQWLGAGSEMVEPQLHRIKT-----PVLVVAGTVDRLLPSFEEAKRLKRELTDCQIHFVEGAGHGGSLDQRVQL 456 PLLLYLPG DG+ L F+Q+P L F+VRC+T+ +DRS+F L V ++ R V+LMGESFGGLLA AL+ D + +KG+VL+NPATSY R+ A+ G + +LP Y LL + L D Q ++ + + SV D R A +G F + F + + L+WRL WL G + +L + L+V G D LPS EEA RLK L + ++ V AGH + R L Sbjct: 48 PLLLYLPGFDGTFLCPFLQFPELGTIFDVRCMTISTSDRSSFAQLTECVVRYIQQETMTTQRPVYLMGESFGGLLACNVALQ---IADGNQLLDLLKGLVLINPATSYDRSRLAREGPPVAQLPWWNYPAGLLQLLPLFTDEHSFQQLL--LILTAQALPSV-------------IDNPMREAYMGRVAFSLPFV----------IPTVTPSTLDWRLHAWLKTGCHYIATRLKTLSNVHPNLRTLIVIGERDETLPSSEEAIRLKEILPNSRVRMVPDAGHASTCGSRADL 311
BLAST of NO02G04860 vs. NCBI_GenBank
Match: XP_002181910.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC46450.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 140.6 bits (353), Expect = 1.300e-29 Identity = 109/343 (31.78%), Postives = 153/343 (44.61%), Query Frame = 0 Query: 172 PLLLYLPGLDGSGLTAFVQYPALAAEFEVRCLTMPNTDRSTFMDLVHLVRTELR---------------------------------SF------------PHRQVFLMGESFGGLLALGTALERINRPDAR-ESTTEIKGVVLVNPATSYSRTIWAKFGQAITKLPEPFYGLSLLPIGLLLVD---AGQIQSVIKDAFGRLREISSVXXXXXXXXXXXXXADQRARMAALGLSPFQIEFFSAALPVLIERLNLLPAPCLEWRLLQWLGAGSEMVEPQLHRIKT----PVLVVAGTVDRLLPSFEEAKRL-KRELTDCQIHFVEGAGHGGSLDQRVQLLEILK 461 PLLLYLPG DGS L+AF+QYP L+ F+VRC+++P +DRSTF +L V LR SF R V+L+GESFGGLLA AL + + ST +++G+VLVNPAT Y R+ A G + Y +L + L D Q++ ++ + + + SV D R A LG + F + +P L WRL QWL G E +L + VL+VAG D LPS +EA+RL L + ++H VEGAGH + R+ L +++ Sbjct: 102 PLLLYLPGFDGSFLSAFLQYPELSTAFDVRCMSIPASDRSTFNELKRSVLQYLRMEIAESIVGDLDQRSSRNKTQPILSSSPFDQIFSFTKGASSKAVYKRSSRSVYLVGESFGGLLASEIALSILESEKSHANSTIDLQGLVLVNPATCYDRSRLAALGPPVANSVPWMYPANLAKLLPLFTDEYSLAQLRLIV-----QAKALPSV-------------IDDAPREAYLGRVALSLPFIFPS----------MPQATLSWRLSQWLEFGCASAEQRLTGLAAFPSFRVLIVAGEFDACLPSIDEAERLVSGVLPNAKVHVVEGAGHASTCGSRMDLTAVMR 416
BLAST of NO02G04860 vs. NCBI_GenBank
Match: PNW75307.1 (hypothetical protein CHLRE_12g521650v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 139.0 bits (349), Expect = 3.700e-29 Identity = 97/294 (32.99%), Postives = 143/294 (48.64%), Query Frame = 0 Query: 172 PLLLYLPGLDGSGLTAFVQYPALAAEFEVRCLTMPNTDRSTFMDLVHLVRTELRS-----FPHRQVFLMGESFGGLLALGTALERINRPDARESTTEIKGVVLVNPATSYSRTIWAKFGQAITKLPEPFYGLSLLPIGLLLVDAGQIQSVIKDAFGRLREISSVXXXXXXXXXXXXXADQRARMAALGLSPFQIEFFSAALPVLIERLNLLPAPCLEWRLLQWLGAGSEMVEPQLHRIKTPVLVVAGTVDRLLPSFEEAKRLKRELTDCQIHFVEGAGHGGSLDQRVQLLEILK 461 PLL+YLPG+DG+GL A+ Q+P LA++F++R + MP DR+ F LV V ++ P R ++L+GESFGG++AL A +R++ D +VLVNPATS+ R+ W G + LP Y LLP+ L + + I + A Q+A GL +P L +LP L WR LQ L G+ V P L ++K L++ G+ D ++PS EA RL+R L C ++G H + V LL I++ Sbjct: 429 PLLVYLPGIDGTGLAAYRQFPGLASKFDLRGVFMPPEDRTPFAGLVESVAAQIEDEVAGLDPGRPLYLLGESFGGIMALALA-QRLSCVDR---------LVLVNPATSFDRSPWPALGPLLPSLPADAY--KLLPVALSPILSNPISMARRAA------------------APGDPLPQQAVDLLYGLLDL--------IPELSSLRVVLPPQTLAWR-LQLLAEGAAAVNPTLGKVKPRTLLLVGSNDLVIPSAAEAPRLERALPRCTSRTLQGGSHALLQESEVDLLRIIQ 683
BLAST of NO02G04860 vs. NCBI_GenBank
Match: PKA57490.1 (Acyltransferase-like protein [Apostasia shenzhenica]) HSP 1 Score: 135.6 bits (340), Expect = 4.100e-28 Identity = 96/299 (32.11%), Postives = 147/299 (49.16%), Query Frame = 0 Query: 172 PLLLYLPGLDGSGLTAFVQYPALAAEFEVRCLTMPNTDRSTFMDLV----HLVRTELRSFPHRQVFLMGESFGGLLALGTALERINRPDARESTTEIKGVVLVNPATSYSRTIWAKFGQAITKLPEPFYGLSLLPIGLLLVDAGQIQSVIKDAFGRLREISSVXXXXXXXXXXXXXADQRARMAALGLSPFQ-----IEFFSAALPVLIERLNLLPAPCLEWRLLQWLGAGSEMVEPQLHRIKTPVLVVAGTVDRLLPSFEEAKRLKRELTDCQIHFVEGAGHGGSLDQRVQLLEILKG 462 PLLL+LPG+DG+G + + +L FEVRCL +P ++RS F +LV H V+ E R P++ ++L+G+SFGG LAL A AR ++ +VLVNPA+S+ ++ F + LP F+ LP L V ++ + GL P Q ++ ++ LP+L + ++P L W+LL L S V +LH IK VLV++ D LLPS +EA RL L +C++ + + +GH L+ + LL I+KG Sbjct: 101 PLLLFLPGIDGTGFGLILHHKSLGRVFEVRCLHVPVSNRSPFEELVGFVEHSVKFESRLSPNKPIYLVGDSFGGCLALAVA--------ARNPEIDLV-LVLVNPASSFGKSQLQPFLPLMEALPSNFH--FALPYVLSFVMGDPVKMAMASVID-------------------------------GLPPQQTLDVLLKSLTSLLPMLSDLAEIIPKETLVWKLL-LLKKASAYVNSRLHAIKAAVLVLSSGKDNLLPSGDEADRLWSSLENCRVRYFKDSGHTLLLEDGINLLTIIKG 356
BLAST of NO02G04860 vs. NCBI_GenBank
Match: EOY11183.1 (Esterase/lipase/thioesterase family protein isoform 1 [Theobroma cacao]) HSP 1 Score: 134.8 bits (338), Expect = 6.900e-28 Identity = 96/294 (32.65%), Postives = 141/294 (47.96%), Query Frame = 0 Query: 172 PLLLYLPGLDGSGLTAFVQYPALAAEFEVRCLTMPNTDRSTFMDLVHLVRTELR----SFPHRQVFLMGESFGGLLALGTALERINRPDARESTTEIKGVVLVNPATSYSRTIWAKFGQAITKLPEPFYGLSLLPIGLLLVDAGQIQSVIKDAFGRLREISSVXXXXXXXXXXXXXADQRARMAALGLSPFQIEFFSAALPVLIERLNLLPAPCLEWRLLQWLGAGSEMVEPQLHRIKTPVLVVAGTVDRLLPSFEEAKRLKRELTDCQIHFVEGAGHGGSLDQRVQLLEILKG 462 P+LL+LPGLDG G+ + + AL FEV+CL +P DR+ F LV +V LR S P+ ++L+G+SFGG LAL A AR T ++ V+LVNPATS+ R+ + P+ + +P L LV ++ GRL + + +A LP L +++P L W+ L+ L + S +LH +K VLV+A D +LPS EEA RLK L +C+I F + GH L+ + LL ++KG Sbjct: 133 PVLLFLPGLDGVGIGLILHHKALGKVFEVQCLHVPVCDRTPFEGLVKVVEETLRLEHASRPNSPIYLVGDSFGGCLALAVA--------ARNPTIDLV-VILVNPATSFGRSQLQPLFPILKAFPDELH--VTIPYILSLVMGEPLKMATVGVEGRLPPTQKIEQLS--------------------------DNLTALLPRLSCLADIIPKETLVWK-LKLLKSASAYANSRLHAVKAEVLVLASDKDNMLPSREEAHRLKNLLPNCEIRFFKDNGHTLLLEDSLNLLTVIKG 388 The following BLAST results are available for this feature:
BLAST of NO02G04860 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G04860 ID=NO02G04860|Name=NO02G04860|organism=Nannochloropsis oceanica|type=gene|length=2745bpback to top protein sequence of NO02G04860.4 >NO02G04860.4-protein ID=NO02G04860.4-protein|Name=NO02G04860.4|organism=Nannochloropsis oceanica|type=polypeptide|length=366bpback to top protein sequence of NO02G04860.3 >NO02G04860.3-protein ID=NO02G04860.3-protein|Name=NO02G04860.3|organism=Nannochloropsis oceanica|type=polypeptide|length=366bpback to top protein sequence of NO02G04860.2 >NO02G04860.2-protein ID=NO02G04860.2-protein|Name=NO02G04860.2|organism=Nannochloropsis oceanica|type=polypeptide|length=408bpback to top protein sequence of NO02G04860.1 >NO02G04860.1-protein ID=NO02G04860.1-protein|Name=NO02G04860.1|organism=Nannochloropsis oceanica|type=polypeptide|length=471bpback to top Synonyms
Publications
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