NO02G04790, NO02G04790 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G04790 vs. NCBI_GenBank
Match: GAX11170.1 (prolyl 4-hydroxylase [Fistulifera solaris]) HSP 1 Score: 134.8 bits (338), Expect = 9.500e-28 Identity = 136/492 (27.64%), Postives = 221/492 (44.92%), Query Frame = 0 Query: 154 SGESQVFVRNDAGKTVYVYWLKPVDG-LYILVGTMFDGQELSFDSFIGHDMHVSAFSAVEAAKDDQAPNLPVRRSSHTLRVLPSNNDREDVVLHMDQSPDNLKKKKEKKSPAKASIPRKTQPKESSPPPLTKPAARYLKTVTIEQTKQAIHT----CQGEATCIVDALYRG-KIAKIQNSIQNAMTKRD-----DMEDRYRDYACLNHITMGPEEIETSYWNYTDEGVEAAMAATTACENDESGMCKDSSSSLSSSS--FNGTQKQIRVDHYFDTDKGNAKIYLLHDIVTPTECAELQKRATGRLAPATTTGDIPGEKVVSATRKAKVAMVRPDLDSDAHDILAPLQRRLFAFVNEHGGGGYENFGLAGQEPFNVIMYNASG------DEYRPHCDGYCDSSKFARGGRAATVVLYCEEAVRGGQTSFTAADILLKGQAGQAVFFHY-RGEDGYMDSGYTKHSGCPLVEGNKWIATQWIRGGVSAAMPWYYF 626 +G F+ N GK V + W P G Y L + Q +SF+SF H + A + + + ++VL D++ VVL + L E+ S K ++ +A Y+ +T +++A HT C+ EA+ L G + ++ S+ + M ++ DM+++ A + ++I T NYT C + K+++ + + + G + + V H ++ +++I++LHD ++ EC ++K A L T G K +S RKA A V D + + +D + +++RLFA+ N GYE L GQE I Y SG D Y PHCDG C+ +GGR AT+V+YC+ GG T+F A++ +K + G A FF Y + G+T HSGCP++ G K IA QW+R GV++ PW F Sbjct: 23 AGRRMEFI-NLTGKKVDIDWQDPSTGATYPLASNTPENQSISFNSFANHKFVIRAHANENSTVHEV-----------IVQVLEDQMDQK-VVLKEGLEVERLLVNYERISYEK-----------EDEADVSSSSANYIIGLTGGDSQKAAHTVLEKCRKEASL---RLAMGVNVDRVSESLSSCMEQQASAVLMDMDEKLSVQASV------LKQISTLAENYT-------------CADP----LKETNEPIEERTWEYEGVSRNVGVLH----NRPSSQIHVLHDFISAEECEAIRKAAEPTLHRGTVADGAGGSK-LSENRKAWQAGVTYDAE-NPNDPILMVKKRLFAYAN--NVTGYE-MELPGQEDLMSIQYFGSGVDNPTPDRYTPHCDGECNGFPHKKGGRVATMVMYCDVPELGGATNFQHANVYVKPKVGAAAFFSYLNPTTRKSEEGFTTHSGCPVLLGTKRIAVQWMRIGVTSDEPWDSF 455
BLAST of NO02G04790 vs. NCBI_GenBank
Match: XP_002176505.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC50968.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 133.3 bits (334), Expect = 2.800e-27 Identity = 88/266 (33.08%), Postives = 131/266 (49.25%), Query Frame = 0 Query: 372 AAMAATTACENDESGMCKDSSSSLSSSSFNGTQKQIRVDHYFDTDKGNAKIYLLHDIVTPTECAELQKRATGRLAPATTTGDIPGEKVVSATRKAKVAMVR-PDLDSDAHDILAPLQRRLFAFVNEHGGGGYENFGLAGQEPFNVIMYNASG------DEYRPHCDGYCDSSKFARGGRAATVVLYCEEAVRGGQTSFTAADILLKGQAGQAVFFHY-RGEDGYMDSGYTKHSGCPLVEGNKWIATQWIRGGVSAAMPWYYFSPTG 630 AA+ C +D KD ++ + + + + H ++ ++I+++ + ++ EC ++ A L A T D G +S RKA A ++ P D + + +A L RR++ + N G G E GQE I Y G D Y PHCDG C G R AT+V+YC+ A GG T+F A + +K + G +FF Y E+ MD+G+T+HSGCP+ EG K I TQWIR GV PW F+ G Sbjct: 190 AALLENYTCTDDSLNSSKDITTQQWKQA--DLTRTVHIKH----ERPTSRIHVIENFISDDECDAMEAAAQKSLHRA-TVADGKGGSRLSDNRKAMQAGIKVPWKDEASGNAIARLSRRVYDYTNHVLGLGIEEH---GQEDLMSIQYFGRGKNDTEPDRYTPHCDGDCTGLPHKHGTRMATMVMYCDVADLGGHTNFRNAGVHVKPERGSGIFFSYIDPENRVMDTGFTEHSGCPVFEGEKKIVTQWIRLGVDTENPWDSFNTLG 445
BLAST of NO02G04790 vs. NCBI_GenBank
Match: OEU20807.1 (hypothetical protein FRACYDRAFT_206059 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 130.6 bits (327), Expect = 1.800e-26 Identity = 81/248 (32.66%), Postives = 125/248 (50.40%), Query Frame = 0 Query: 390 DSSSSLSSSSFNGTQKQIRVDHYFDTDKGNAKIYLLHDIVTPTECAELQKRATGRLAPATTTGDIPGEKVVSATRKAKVAMVRPDLDSDAH----DILAPLQRRLFAFVNEHGGGGYENFGLAGQEPFNVIMYNASG------DEYRPHCDGYCDSSKFARGGRAATVVLYCEEAVRGGQTSFTAADILLKGQAGQAVFFHYRGED-GYMDSGYTKHSGCPLVEGNKWIATQWIRGGVSAAMPWYYFS 627 +SS + + + ++ + + D+ ++I+++ + +P EC ++ A L A+T G K VS RKA A ++P ++ +++A L R++ +VN + GQEP I Y G D Y PHCDG C GGR AT+V+YC+ +GG T+F A++ +K AG AVFF Y + D+G T+HSGCP+ EG K I TQW+R GV P F+ Sbjct: 53 ESSPDVITEDWMSSKDNVTRTVHVKLDRPASRIHVVENFASPDECGSMETEAEKDLHVASTADGKGGSK-VSLGRKAMQAGIKPAFTAEGEPLDGNLIATLSGRVYEYVNRVLD---MDISHQGQEPLMSIQYFGRGKHDIEPDRYTPHCDGRCTGENHVYGGRMATMVIYCKIPAKGGFTNFQNANVHVKPSAGSAVFFSYIDPNTNETDNGLTQHSGCPVYEGEKKIITQWVRYGVDGDTPHNAFN 296
BLAST of NO02G04790 vs. NCBI_GenBank
Match: XP_002294557.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED87917.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 124.4 bits (311), Expect = 1.300e-24 Identity = 78/222 (35.14%), Postives = 117/222 (52.70%), Query Frame = 0 Query: 416 DKGNAKIYLLHDIVTPTECAELQKRATGRLAPATTTGDIPGEKVVSATRKAKVAMVRPDLDSDAH-DILAPLQRRLFAFVNEHGGGGYENFGLAGQEPFNVIMYNASG------DEYRPHCDGYCDSSKFARGGRAATVVLYCEEAVRGGQTSFTAADILLKGQAGQAVFFHY-RGEDGYMDSGYTKHSGCPLVEGNKWIATQWIRGGVSAAMPWYYFSPTG 630 D+ ++I+++ + +T EC +++ A L A T D G +S +RKA A ++ D +A D++A L RR++++VN + GQE I Y G D Y PHCDG C+ GR AT+V+YC+ GG T+F + + +K + A FF Y + MD G+T+HSGCP++EG K I TQW+R GV PW F+ G Sbjct: 114 DRPASRIHVVENFLTEDECKAVEEAAAPVLHHA-TVADGSGGSHLSDSRKAMQAGIKVHWDKEAEGDLIARLSRRVYSYVNHVLPFDIKE---NGQEDLMSIQYFGRGADDDKPDRYMPHCDGDCN-------GRMATIVMYCDVPEVGGATNFRNSGVHIKPEKYAATFFSYIDPKTMKMDGGFTEHSGCPVIEGEKKIVTQWVRLGVDDENPWNSFNTLG 324
BLAST of NO02G04790 vs. NCBI_GenBank
Match: EJK57081.1 (hypothetical protein THAOC_22915 [Thalassiosira oceanica]) HSP 1 Score: 120.6 bits (301), Expect = 1.900e-23 Identity = 84/254 (33.07%), Postives = 125/254 (49.21%), Query Frame = 0 Query: 384 ESGMCKDSSSSLSSSSFNGTQKQIRVDHYFDTDKGNAKIYLLHDIVTPTECAELQKRATGRLAPATTTGDIPGEKVVSATRKAKVAMVRPDLDSDAH-DILAPLQRRLFAFVNEHGGGGYENFGLAGQEPFNVIMYNASG------DEYRPHCDGYCDSSKFARGGRAATVVLYCEEAVRGGQTSFTAADILLKGQAGQAVFFHY-RGEDGYMDSGYTKHSGCPLVEGNKWIATQWIRGGVSAAMPWYYFSPTG 630 E+ C D S + + + G + +VD + D+ ++I+ + + ++ ECA +++RA L AT G K +S +RKAK A ++ D + D++A + RR++ +VN + GQE I Y G D Y PHCDG C+ +F G R AT+V+YCE + + A FF Y E MD G+T+HSGCP+VEG K I TQW+R GV PW F+ G Sbjct: 213 ENYTCADESLNTTEAKRTGRWQGRKVDIFI--DRPASRIHTIENFMSAEECAAVEERAKPILHDATVADGSGGSK-LSESRKAKQAGIKVHWDKEKEGDLIARVSRRVYDYVNNVLPFEIKE---NGQEDLMSIQYFGRGPNDEAPDRYMPHCDGDCNGLEFKPGNRMATIVMYCETP---------------EPKQYAATFFSYIDPETMKMDDGFTEHSGCPVVEGEKKIVTQWVRLGVDDENPWDSFNTLG 445
BLAST of NO02G04790 vs. NCBI_GenBank
Match: OEU07971.1 (hypothetical protein FRACYDRAFT_212889 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 116.7 bits (291), Expect = 2.700e-22 Identity = 88/272 (32.35%), Postives = 125/272 (45.96%), Query Frame = 0 Query: 377 TTACENDESGMCKD----SSSSLSSSSFNGTQKQIRVDHYFDTDKGNAKIYLLHDIVTPTECAELQKRATGRLAPATTTGDIPGEKVVSATRKAKVAMVRPDLDSD--------AHDILAPLQRRLFAFVNEHGGGGYENFGLAGQEPFNVIMYNASG------DEYRPHCDGYCDSSKFARGGRAATVVLYCEEAVRGGQTSFTAADILLKGQAGQAVFFHYRGEDGYM-DSGYTKHSGCPLVEGNKWIATQWIRGGVSAAMPWYYFSPTG 630 T E E+ C D +S S+ + ++ G + R + D+ +KI ++ + ++ EC + A +L A T D G +S RKA A ++ + +A L R+++ F N N GQE I Y G D Y PHCDG C G R AT+V+YC GG T+F A + +K + G AVFF Y D + D+G T+HSGCP++EG K I TQWIR GV PW F+ G Sbjct: 216 TGMAEMMENYTCADLKLNTSESIRTDTWRGARDHKRRNVNVLLDRPASKIIVIDNFISEQECTAMANAAKPKLHQA-TVADGKGGSHMSEHRKAMQAGIKVPWSLENXXXXXXXXXXXIAILSRKVYDFTNYMLD---LNINEYGQEDLMSIQYFGRGINDTQPDRYTPHCDGDCTGLPHKTGTRMATMVMYCNIPEVGGHTNFRNAGVHVKPKIGSAVFFSYIDPDTRITDTGLTEHSGCPVLEGEKKIVTQWIRLGVDDDSPWDAFNSLG 483
BLAST of NO02G04790 vs. NCBI_GenBank
Match: XP_009037759.1 (hypothetical protein AURANDRAFT_15783, partial [Aureococcus anophagefferens] >EGB07778.1 hypothetical protein AURANDRAFT_15783, partial [Aureococcus anophagefferens]) HSP 1 Score: 115.5 bits (288), Expect = 6.000e-22 Identity = 54/104 (51.92%), Postives = 69/104 (66.35%), Query Frame = 0 Query: 510 QEPFNVIMYNASGDEYRPHCDGYCDSSKFARGGRAATVVLYCEEAVRGGQTSFTAADILLKGQAGQAVFFHYRGEDGYMDSGYTKHSGCPLVEGNKWIATQWIR 614 QEP N I Y +G EYRPHCDG C+ +ARGGR AT++ YC+ A GG T F A+I ++ + G AV F Y+ +DGYMD G T H+GC + EG K I T W+R Sbjct: 7 QEPLNFIQYAVAG-EYRPHCDGVCNRKPYARGGRVATLIHYCKAADVGGGTVFPKANIKVQPRDGSAVLFAYKRDDGYMDDGNTMHTGCLVREGYKQIVTMWMR 109
BLAST of NO02G04790 vs. NCBI_GenBank
Match: WP_018438166.1 (2-oxoglutarate-dependent dioxygenase [Burkholderia sp. JPY251]) HSP 1 Score: 98.6 bits (244), Expect = 7.500e-17 Identity = 62/199 (31.16%), Postives = 101/199 (50.75%), Query Frame = 0 Query: 421 KIYLLHDIVTPTECAELQKRATGRLAPATTTGDIPGEKVVSATRKAKVAMVRPDLDSDAHDILAPLQRRLFAFVNEHGGGGYENFGLAGQEPFNVIMYNASGDEYRPHCDGYC-----DSSKFARGG-RAATVVLYCEEAVRGGQTSFTAADILLKGQAGQAVFFHYRGEDGYMDSGYTKHSGCPLVEGNKWIATQWIR 614 ++ + D+++ ECAEL +R+ RL +TT + G + V R ++ R D ++A ++RR+ + N+ L E V+ Y SG EY PH D + + A+GG R AT+++Y + GG+T F A + + QAG AV+F Y + +D T H G P++ G+KWI T+W+R Sbjct: 98 QLVVFADVLSAAECAELIERSRHRLKRSTTVNPLTGREDVIRNRTSEGVWYRRGED----QLIARVERRIASLT---------NWPLENGEGLQVLHYGTSG-EYSPHFDFFAPDQPGSAVHTAQGGQRVATLIIYLNDVADGGETVFPTAGLSVAAQAGGAVYFRYMNGERQLDPS-TLHGGAPVLAGDKWIMTKWMR 281
BLAST of NO02G04790 vs. NCBI_GenBank
Match: WP_013091799.1 (2-oxoglutarate-dependent dioxygenase [Burkholderia sp. CCGE1002] >ADG17999.1 Procollagen-proline dioxygenase [Burkholderia sp. CCGE1002]) HSP 1 Score: 97.8 bits (242), Expect = 1.300e-16 Identity = 60/199 (30.15%), Postives = 98/199 (49.25%), Query Frame = 0 Query: 421 KIYLLHDIVTPTECAELQKRATGRLAPATTTGDIPGEKVVSATRKAKVAMVRPDLDSDAHDILAPLQRRLFAFVNEHGGGGYENFGLAGQEPFNVIMYNASGDEYRPHCDGYCDSSKFAR------GGRAATVVLYCEEAVRGGQTSFTAADILLKGQAGQAVFFHYRGEDGYMDSGYTKHSGCPLVEGNKWIATQWIR 614 ++ + D+++ ECAEL +R+ RL +TT + G + V R ++ R D ++A ++RR+ + N+ L E V+ Y SG EY PH D + + G R AT+++Y + GG+T F A + + QAG AV+F Y + +D T H G P++ G+KWI T+W+R Sbjct: 98 QLVVFADVLSAAECAELIERSRHRLKRSTTVNPLTGREDVIRNRTSEGVWYRRGED----QLIARVERRIASLT---------NWPLENGEGLQVLHYGTSG-EYSPHFDFFAPDQPGSAVHTTQGGQRVATLIIYLNDVADGGETVFPTAGLSVAAQAGGAVYFRYMNAERQLDPS-TLHGGAPVLAGDKWIMTKWMR 281
BLAST of NO02G04790 vs. NCBI_GenBank
Match: OLQ01291.1 (Prolyl 4-hydroxylase subunit alpha-1 [Symbiodinium microadriaticum]) HSP 1 Score: 97.4 bits (241), Expect = 1.700e-16 Identity = 61/193 (31.61%), Postives = 90/193 (46.63%), Query Frame = 0 Query: 422 IYLLHDIVTPTECAELQKRATG--RLAPATTTGDIPGEKVVSATRKAKVAMVRPDLDSDAHDILAPLQRRLFAFVNEHGGGGYENFGLAGQEPFNVIMYNASGDEYRPHCDGYCDSSKFARGGRAATVVLYCEEAVRGGQTSFTAADILLKGQAGQAVFFHYR-GEDGYMDSGYTKHSGCPLVEGNKWIATQW 612 + L+ + CA L + A G L+ A G G S+++ ++ +A +IL L+ ++F E + EP N+ Y GDEYRPHCDG C + G R AT +LYC+ +GG T+FT + + G + F Y G+ M +HS CP++ G KWIATQW Sbjct: 1292 VALIKSFASSATCARLLEVAGGLESLSNAVAKGATGGFYRRSSSKNLANQVL------EADEILRSLRSQMFIVTGEL---TRYKLNMTSPEPLNLAAYRKRGDEYRPHCDGRCGGDRHRPGERVATSILYCQVPAQGGHTTFTMDTLKIGPDQGDMLVFGYLIGQT--MARQEAEHSSCPILAGGKWIATQW 1473 The following BLAST results are available for this feature:
BLAST of NO02G04790 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G04790 ID=NO02G04790|Name=NO02G04790|organism=Nannochloropsis oceanica|type=gene|length=2036bpback to top protein sequence of NO02G04790.1 >NO02G04790.1-protein ID=NO02G04790.1-protein|Name=NO02G04790.1|organism=Nannochloropsis oceanica|type=polypeptide|length=647bpback to top Synonyms
Publications
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