NO02G04470, NO02G04470 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G04470 vs. NCBI_GenBank
Match: EWM30244.1 (RAP domain protein [Nannochloropsis gaditana]) HSP 1 Score: 783.1 bits (2021), Expect = 1.000e-222 Identity = 694/976 (71.11%), Postives = 752/976 (77.05%), Query Frame = 0 Query: 8 GGSGGLPSLSSSPPSALLPNRLLL----PRLLLILTVACVQAWILPVQYHQQHFSCSSSSTAGCRRGRGSGVLPLTQPKATATSYAASSG--SAGHNDAADSADEKDSTLKDNG--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 976 G SG P A +P+ L LLL + CVQAW++PV+Y++ + R RGSGV PLT +ATA S+A + AGH + + AD+ S +K G +RR RS P HA + E R KQITSFLRNAG+EGG GIMEVV H +ELNSVHCTMVLNRLSK +ERD VLQS GF LM++ +QV+ +FSNRDIAQAAISLARFRD R++ +WQGLI ALQ++A SL M+TKELAMI+NAFANLP+PP PAYWD FS++FL KA+DFD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D XXXXXXXXXXXXXXXXXXXXXXXXXXXX LGRLG XXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PG FMEA+E E GRRVA GVNSQALAMTLNAFNRLNWKPSPRLL+EME+SLE ATCEGLIFGAELAQAVNGLANLNHTPGRSFLAAFKNVILEQKN+VDLSTIAVILWSLSALDPARMKGFYTEMVEVACRRLEGEQP+ LP SF GERSSMYY+SFNEVVPTIGGESLEPPMVMCVRQLLQTCRYLTML+NPID LF+RFS+LL +KWAE+Q EKYEVHTS+FHRDVLAVVTKSLGLRCDIEVEDEAYTLDMVIYP DGGLPVVVEADGPHHFFRNQP+EAMGFTVFKHRLL+GR+DRWRAVVSV Q EWQRAKESD++RGRT LL++KL+ AGLDL VTE V+DP Sbjct: 20 GASGASCPRRREGPIAAIPSAFPLHVASSLLLLFFVLQCVQAWVVPVKYYKHECLNPGLTKISPSRRRGSGVSPLTTSRATAASWATTRDGYGAGHTE-GEGADDTASGIKGIGGVNRRARSRPGAAMEEVRPPREARKPSWKPRGKSQAHA-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 993
BLAST of NO02G04470 vs. NCBI_GenBank
Match: EWM29914.1 (hypothetical protein Naga_100035g39 [Nannochloropsis gaditana]) HSP 1 Score: 79.0 bits (193), Expect = 9.300e-11 Identity = 102/435 (23.45%), Postives = 162/435 (37.24%), Query Frame = 0 Query: 631 MEAFEAELGRRVAVGVNSQALAMTLNAFNRLNWKPSPRLLIEMERSLERATCEGLIFGAELAQAVNGLANLNHTPGRSFLAAFKNVILEQKNFVDLSTIAVILWSL--------------------------------SALDPARMKGFYT--------------EMVEVACRRLEGEQPEPLPVSFPGERSSMYYSSFNEVVPTIGGESLEPPMV------MCVRQLLQTCRYLTMLSN-----------PIDQGLFRRFSTLLAEKWAELQLEKYEVHTSFFHRDVLAVVT-KSLGLRCDIEVEDEAYTLDMVIYPE---------------DG---------GLPVVVEADGPHHFFRNQPEEAMGFTVFKHRLLEGR------------ADRWRAVVSVPQTEWQRAKESDARRGRTTLLVKKLKEAGLDL 966 +EA E E ++ + Q +AM +NAF R+ + LL + SL + G L + PG+ FLAAF+ + + +DLS++ +ILWSL SAL PA ++ E+ A + E + + S + S PT+ S P V + R L Q + L S+ P + L+ +L+ W + + S H+ V+ +T + R + +V + ++LD+V++P DG LPVVVE DGP H+ N P+ G T+FK R+L G+ + RW AV+S+ EW+ + + LL +KLK GL L Sbjct: 927 VEALEGE--GTFSLNLGPQDVAMVVNAFARMQMRADDHLLDNLAVSLLDRLPQS--EGQALXXXXXXXXXXXYHPGQGFLAAFEVEVRRRIATLDLSSLCLILWSLAVMESSACSSSSMPIRNGASGARWEETDGTSASALSPALLEDAIAVRLLPELRAQLSRLELARSAVGKQIDSNEEIDGIDAESQSSHVPGPSLALSGPTLSQRSRPSPPVPRLSPALLTRSLCQILQVLLYTSSCSFAPAELRDIPGSKALY----SLVIRAWGHVAHLREPPVPSALHQQVMGTLTLAGVSYRAEEKVCEGTFSLDLVLFPRGNCRNCSSDRNKSVLDGEEASHSSRVALPVVVEVDGPSHYMVNMPDMLTGDTMFKRRMLLGQRSLRKDEGAHAPSQRWAAVLSLLLWEWEEV--GPRYQNKIALLRRKLKAEGLRL 1351
BLAST of NO02G04470 vs. NCBI_GenBank
Match: EWM30309.1 (RAP domain protein [Nannochloropsis gaditana]) HSP 1 Score: 76.3 bits (186), Expect = 6.100e-10 Identity = 92/370 (24.86%), Postives = 156/370 (42.16%), Query Frame = 0 Query: 660 RLNWKPSPRLLIEMERSLERATCEGLIFGAELAQAVNGLANLNH-----TPGRSFLAAFKNVILEQKNFVDLSTIAVILWSLSAL----DPARMKGFYTEMVEVACRRLEGEQPEPL-------PVSFPGE-----------RSSMYYSSFNEV-------VPTIGG----------ESLEPPMVMCVRQ---LLQTCRYLTMLSNPIDQGLFRRFSTLLAEKWAELQLEKYEVHTSFFHRDVLAVVTKSLGLRCDIEVEDEAYTLDMVIYP-------------ED--GG---LPVVVEADGPHHFFRNQPEEAMGFTVFKHRLLEGRADRWRAVVSVPQTEWQRAKESDARRGRTTLLVKKLKEAGLD 965 +L ++P L + S R+ E FG + A ++GLA L++ GR + ++ +K+ + ++++ LW+L+ L DP+R K +VE A RL E PV G+ R+++ + S EV T GG + + P + V + L C L + ++ ++ F + + + W +L V +S +V + + G C E EDE T+D+ ++P ED GG PV +E DGP HFF NQP+ G T KH+ L +W AV+S+ EW ++ + + +L KK+ + GL+ Sbjct: 208 KLRYRPDDSFLSALLFSC-RSRAEAQTFG-QAAHLISGLARLDYDFKEDELGRLACLMEERLLTMEKDTLHPESLSMGLWALAVLGPLGDPSREK-LRHWLVEAAIDRLASAHAEATAAGFGQGPVLSEGKAKNLVRICRLLRTALLFLSDPEVGQSGKKASGTSGGWEGKEVGEGRRAAKTPSLASVSRPAPALSPCYPLAVSNDDLNLSAFAKLRLCVDQVWLDLGAWVDPVRSSRLQMEVESTLRYG-GAYCTGEWEDEVVTVDVALHPRPMSGSEDAEGAREDRRGGRRVRPVALEVDGPSHFFVNQPQRPTGDTKIKHQALH-LGGQWSAVISLAHFEWPKSSKQ-----QLAVLKKKIAQTGLE 567
BLAST of NO02G04470 vs. NCBI_GenBank
Match: XP_011397416.1 (hypothetical protein F751_1520 [Auxenochlorella protothecoides] >KFM24528.1 hypothetical protein F751_1520 [Auxenochlorella protothecoides]) HSP 1 Score: 70.5 bits (171), Expect = 3.300e-8 Identity = 75/268 (27.99%), Postives = 118/268 (44.03%), Query Frame = 0 Query: 707 RSFLAAFKNVILEQKNFVDLSTIAVILWSLSALDPARMKGFYTEMVEVACRRLEGEQPE-------PLPVSFPGERSSMYYSSFNEVVPTIGGESLEPPMVMCVRQLLQTCRYLTMLSNPIDQGLFRRFSTLL-AEKWA--ELQLEKYEVHTSFFHRDVLAVVTKSLGLRCDIEVE--DEAYTLDMVIYPEDGGLPVVVEADGPHHFFRNQPEEAMGFTVFKHRLLEGRADRWRAVVSVPQTEWQRAKESDARRGRTTLLVKKLKEAG 963 R LA+ + ILE V +TI L + +AL + K F + E RLE Q ++ G+ S+ ++ F P + EP V +LLQ YL M + + +ST L AE A E + + + S+ +D+L+ + +LGL ++E + ++D + E + VEADGP HF P + + T+F+ RLLE + W VVSVP EW R + ++ + EAG Sbjct: 913 RPLLASIQGRILEDLGSVGNNTIIRYLVTCAALQESPGKPFLDAVAEEVLGRLERRQASHSHLIMVAWAMATLGQLSAARFAEFLRAAPA----ATEPSHVGNHGRLLQIALYLQMETG-------KHYSTFLPAEILAVVEERAREDQPTVSYLQQDILSAL-NTLGLEFEMEARAVNGLLSVDFALQGEHTSRKIAVEADGPLHFAPTPPYQPLSHTLFRDRLLE--YNGW-TVVSVPFYEWNRLRSLTQKQAYLREKLAPAVEAG 1165
BLAST of NO02G04470 vs. NCBI_GenBank
Match: EWM23413.1 (hypothetical protein Naga_100077g16 [Nannochloropsis gaditana]) HSP 1 Score: 68.2 bits (165), Expect = 1.700e-7 Identity = 42/129 (32.56%), Postives = 63/129 (48.84%), Query Frame = 0 Query: 849 SFFHRDVLAVVTKSLGLRCDIEVEDEAYTLDMVIYPED-----------GGLPVVVEADGPHHFFRNQPEEAMGFTVFKHRLLEGRADRWRAVVSVPQTEWQRAK-ESDARRGRTTLLVKKLKEAGLDL 966 S HR VL + +++GL C+ EV LD+V+YP LP+V+E DGP HF P G TV +HR + + D+W +VS+ + Q K + R L K ++AG++L Sbjct: 347 SLLHRRVLDAL-RTVGLVCEDEVCHAGLRLDVVVYPPSIXXXXXXSLFRPRLPLVIEIDGPQHFIHGDPTRPTGATVARHRFVRSQQDQWAGLVSLTHADAQGEKGRTPVERLLAVLEAKVREQAGVEL 474 The following BLAST results are available for this feature:
BLAST of NO02G04470 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 5
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G04470 ID=NO02G04470|Name=NO02G04470|organism=Nannochloropsis oceanica|type=gene|length=3186bpback to top protein sequence of NO02G04470.1 >NO02G04470.1-protein ID=NO02G04470.1-protein|Name=NO02G04470.1|organism=Nannochloropsis oceanica|type=polypeptide|length=978bpback to top Synonyms
Publications
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