NO02G04370, NO02G04370 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G04370 vs. NCBI_GenBank
Match: XP_017552767.1 (PREDICTED: Werner syndrome ATP-dependent helicase [Pygocentrus nattereri]) HSP 1 Score: 187.2 bits (474), Expect = 2.600e-43 Identity = 186/692 (26.88%), Postives = 293/692 (42.34%), Query Frame = 0 Query: 11 LLKACLPEVPIIAVTATATHHVQGDIINQLHLADPMIIRSSINRPNLHYTVKAKSPSSSTSGAMEDLRSILLHPLSXXXXXXXXXXXXSAIVYVSTKAEAEDLTKNLTQNLGITAAAYHGGMTEVARRETYNKWSGDEVRVVCATVAFGMGVDKPDVRMVVCYGLTKSLEDFLQMTGRAGRDGLPSRGVMFWAPKDITTLNFLANHTNGSEQFDGRTAQQQAGANMAKIQEVQRFARQAACRRASLLKHFGESASASALQAAAGDDWQGRCCDFCDMHGNGVDSTAAQAPGTVLRGSLPAAEYNKAARQVLGAVEKM--KSGAKKVLLMLMASEQKDIRTRPDIGRIKAHPAWGAAKGSKQGDGWWQAWLNQLTDEGYAEHRQMKGAREGTMFQVLELSEKGRFFLGEA------------GAELAPMV-------ANEELVQEEGQ---IRVLQQRAEAREEARRLREXXRMAAQG---KEEEVMQXXXXXXXXXXXXXXXXXXXXXXXGGGMKAYQ------------IADEAFLRQLARVRPTTVEGLRKVGGWAEAKIERFGLAFVDVVKKKSAELGLTTDLLWMSPAATSPAAAGVFEVGLAGXXXXXXXXXXXXXXXXXXXXXVETHRLFMEEGKSVREISNDRLKPIKEATVRSYLAQCFMHGLPLAWGRLELPEGLLEAVKRVM 664 +LK CLP+VPI+A+TATA+ ++ DI+ L L +P+I +S +RPNL+ V KS ++DL+ L+ + IVY +K EAE +T L LG+ YH G+ RRET ++ DE++ V ATVAFGMG++KPD+R V+ YG K +E + Q GRAGRDGLPS + W P D+ FL N T S++F G + A +++++ CRR S+L HF + G +CCD C +T + G+ ++ A Q++GAV M K G +L+L S + + P+ R + HP +GA + + WW+A +L E Y M+ + +L+ +GR +L +A +L P +V+ +G L QRA R +A + E + + Q G + Q +A L +A++RP TV L++V G +EAK ++ K ++ + + S AA P + G A +++LF EGKS+R++++ R P+ A V S+L Q PL + L L + R++ Sbjct: 612 VLKRCLPDVPIVALTATASPSIRDDIVRSLRLVNPLITCTSFDRPNLYLDVDRKS-----GDIIKDLKRFLV-----KKNGGDYEFEGATIVYCQSKKEAERVTAAL-YKLGVRCGVYHAGLGIKQRRETQYQFMRDEIQCVVATVAFGMGINKPDIRKVIHYGAPKEMESYYQEIGRAGRDGLPSACHVLWMPTDMALNRFLLNQTK-SDRFRGYKLEMMA--------KMEKYLNSTKCRRKSILSHFEDKQLRKVTSGILG---TSKCCDNCKF-----GTTLSTWKGS---SDQDLKDFGPCAFQLMGAVSAMGEKFGITAPILLLRGSNSQKV---PE--RFRKHPLYGAER--SVSEAWWRALGRELISEKYL----MESTGYNKFSTLCKLTPQGRTWLNKAQDERHRTLLLQPNRDLCPRAYVPRNQDTRPPVVRVQGSPPGTAQLLQRANLRSQA-DVSEVVKKGGPSDFRSDSGCSQAPPAKPQPPAISARELELQAELYGKLVAERQKLASIKDVPPAILATNKILLDMAKLRPCTVARLKQVEGVSEAKANMLSPLLQTIL--KFCQMHSLQEAV-ASSAAPCPVQPPSTQAGRAS-------------AVPLTDSVAVSYKLFQTEGKSLRQVADARSLPM--AVVESHLLQAQKANHPLDTEKAGLSTSLFNTITRIV 1242
BLAST of NO02G04370 vs. NCBI_GenBank
Match: XP_019767311.1 (PREDICTED: Werner syndrome ATP-dependent helicase-like [Dendroctonus ponderosae] >XP_019767312.1 PREDICTED: Werner syndrome ATP-dependent helicase-like [Dendroctonus ponderosae] >ENN72905.1 hypothetical protein YQE_10475, partial [Dendroctonus ponderosae] >ERL92522.1 hypothetical protein D910_09835 [Dendroctonus ponderosae]) HSP 1 Score: 186.4 bits (472), Expect = 4.400e-43 Identity = 155/553 (28.03%), Postives = 265/553 (47.92%), Query Frame = 0 Query: 11 LLKACLPEVPIIAVTATATHHVQGDIINQLHLADPMIIRSSINRPNLHYTVKAKSPSSSTSGAMEDLRSILLHPLSXXXXXXXXXXXXSAIVYVSTKAEAEDLTKNLTQNLGITAAAYHGGMTEVARRETYNKWSGDEVRVVCATVAFGMGVDKPDVRMVVCYGLTKSLEDFLQMTGRAGRDGLPSRGVMFWAPKDITTLNFLANHTNGSEQFDGRTAQQQAGANMAKIQEVQRFARQAACRRASLLKHFGESASASALQAAAGDDWQGRCCDFCDMHGNGVDSTAAQAPGTVLRG--SLPAAEYNKAARQVLGAVEKM--KSGAKKVLLMLMASEQKDIRTRPDIGRIKAHPAWGAAKGSKQGDGWWQAWLNQLTDEGYAEHRQMKGAREGTMFQVLELSEKGRFFLGEAGAELAPMVANEELVQEE-GQIRVLQQRAE-----AREEARRLREXXRMAAQGKEEEVMQXXXXXXXXXXXXXXXXXXXXXXXGGGMKAYQIADEAFLRQLARVRPTTVEGLR--KVGGWAEAKIERFGLAFVDVVKKKSAEL 552 +LK LPEVP++AVTATAT V+ DII L L +P ++ + +RPNL+Y + K S +DL+ ++ S I+Y T+ + +L++ L QN ++ YH G++ R+ET+ ++ D++ V+ AT+AFGMG+DKPD+R V+ YG + S+E + Q GRAGRDGLPS+ V F++ +D T FL G+ + ++A + ++++ CRRA L+ +F A S + + CCD C + A + ++ G ++ + A + L A+ + K G ++ + S+ I PD R+++HP++G G + D WW+A N L + Y + + K A F V ++S++G FL P + + L Q G + +L++R + +A + + K EE Q Y +A + L ++AR +P ++ LR K+ G EA+IE+FG ++V+K +A++ Sbjct: 203 MLKTLLPEVPVLAVTATATERVKNDIIKSLKLLNPQLVGTGFDRPNLYYAARPKG-----SSLFDDLKPLMTR------KNGKWGFDGSTIIYCITRKDTANLSEVL-QNHQVSCLPYHAGLSLAVRKETHEQFVKDKIPVIIATIAFGMGIDKPDIRNVIHYGSSGSIESYYQEVGRAGRDGLPSKCVAFFSSQDFATHGFLIE--------KGQNSNRRA----ELLSTMKQYLNSRKCRRAFLVSYFEGKADLSMPE-------RSDCCDNC-------LAKTAPSDQSIYEGVDERDFYDFTEDAVKYLSAISALGGKYGHGMYIMFVRGSKSSKI---PD--RLRSHPSFGT--GKNKSDDWWKAIANFLDLKHYLKQAKSKTA-SSFSFSVFDVSDEGLKFLN------TPPDSRKLLEQPTLGILHLLKKRQTTSGWISSGKAPSVSGTVDVVDFAKTEETHQ--EVDERLQLLRLLKNARSQLARSNDCMPYMVASDFILMEMARHKPRHLDQLRGMKIEGLTEARIEKFGHQLLEVIKNNTADV 701
BLAST of NO02G04370 vs. NCBI_GenBank
Match: XP_024271039.1 (Werner syndrome ATP-dependent helicase homolog [Oncorhynchus tshawytscha]) HSP 1 Score: 183.3 bits (464), Expect = 3.700e-42 Identity = 134/409 (32.76%), Postives = 202/409 (49.39%), Query Frame = 0 Query: 12 LKACLPEVPIIAVTATATHHVQGDIINQLHLADPMIIRSSINRPNLHYTVKAKSPSSSTSGAMEDLRSILLHPLSXXXXXXXXXXXXSAIVYVSTKAEAEDLTKNLTQNLGITAAAYHGGMTEVARRETYNKWSGDEVRVVCATVAFGMGVDKPDVRMVVCYGLTKSLEDFLQMTGRAGRDGLPSRGVMFWAPKDITTLNFLANHTNGSEQFDGRTAQQQAGANMAKIQEVQRFARQAACRRASLLKHFGESASASALQAAAGDDWQGRCCDFCDMHGNGVDSTAAQAPGTVLRGSLPAAEYNKAARQVLGAVEKM--KSGAKKVLLMLMASEQKDIRTRPDIGRIKAHPAWGAAKGSKQGDGWWQAWLNQLTDEGYAEHRQMKGAREGTMFQVL-ELSEKGRFFLGEA 418 LK LP VPI+A+TATA+ ++ DI+ L+L P++ +S +RPNL+ VK KS G +DL L S+IVY ++ EAE +T LT +LG+T YH G+ RRET +++ DE++ + ATVAFGMG++K D+R V+ YG K +E + Q GRAGRDGLPS + WAP D+ FL N + + G + + ++ + + CRR +L HF + G D +CCD C S A G +Y A Q++GAV M + G+ +L L S + + P+ + + HP +GA G + W+A +L +E Y +K A + F VL +++ KGR++L A Sbjct: 620 LKRSLPNVPIVALTATASPSIREDIVKSLNLEQPIVTCTSFDRPNLYLDVKRKS-----GGVFQDLNGFL-----KKTTGGGYEFEGSSIVYCPSRKEAERVTSTLT-SLGVTCGVYHAGLGIKQRRETQHRFMRDEIQCIVATVAFGMGINKADIRKVIHYGAPKEMESYYQEIGRAGRDGLPSACHVLWAPADLKLNRFLINQVANN---------KFRGYKLKMMGKMDLYLNSSKCRRKLILSHFEDKQLRKVTSGIMGTD---QCCDNC-------RSGAVNRVGVNDTVDGGRQDYGVLAFQLMGAVSAMGERFGSSAPILFLRGSYSQRV---PE--KYRCHPLFGA--GKSVSEPCWKALARELVNEEY-----LKEATGTSKFCVLCKITPKGRWWLSRA 986
BLAST of NO02G04370 vs. NCBI_GenBank
Match: XP_024260404.1 (Werner syndrome ATP-dependent helicase [Oncorhynchus tshawytscha]) HSP 1 Score: 183.3 bits (464), Expect = 3.700e-42 Identity = 134/409 (32.76%), Postives = 202/409 (49.39%), Query Frame = 0 Query: 12 LKACLPEVPIIAVTATATHHVQGDIINQLHLADPMIIRSSINRPNLHYTVKAKSPSSSTSGAMEDLRSILLHPLSXXXXXXXXXXXXSAIVYVSTKAEAEDLTKNLTQNLGITAAAYHGGMTEVARRETYNKWSGDEVRVVCATVAFGMGVDKPDVRMVVCYGLTKSLEDFLQMTGRAGRDGLPSRGVMFWAPKDITTLNFLANHTNGSEQFDGRTAQQQAGANMAKIQEVQRFARQAACRRASLLKHFGESASASALQAAAGDDWQGRCCDFCDMHGNGVDSTAAQAPGTVLRGSLPAAEYNKAARQVLGAVEKM--KSGAKKVLLMLMASEQKDIRTRPDIGRIKAHPAWGAAKGSKQGDGWWQAWLNQLTDEGYAEHRQMKGAREGTMFQVL-ELSEKGRFFLGEA 418 LK LP VPI+A+TATA+ ++ DI+ L+L P++ +S +RPNL+ VK KS G +DL L S+IVY ++ EAE +T LT +LG+T YH G+ RRET +++ DE++ + ATVAFGMG++K D+R V+ YG K +E + Q GRAGRDGLPS + WAP D+ FL N + + G + + ++ + + CRR +L HF + G D +CCD C S A G +Y A Q++GAV M + G+ +L L S + + P+ + + HP +GA G + W+A +L +E Y +K A + F VL +++ KGR++L A Sbjct: 620 LKRSLPNVPIVALTATASPSIREDIVKSLNLEQPIVTCTSFDRPNLYLDVKRKS-----GGVFQDLNGFL-----KKTTGGGYEFEGSSIVYCPSRKEAERVTSTLT-SLGVTCGVYHAGLGIKQRRETQHRFMRDEIQCIVATVAFGMGINKADIRKVIHYGAPKEMESYYQEIGRAGRDGLPSACHVLWAPADLKLNRFLINQVANN---------KFRGYKLKMMGKMDLYLNSSKCRRKLILSHFEDKQLRKVTSGIMGTD---QCCDNC-------RSGAVNRVGVNDTVDGGRQDYGVLAFQLMGAVSAMGERFGSSAPILFLRGSYSQRV---PE--KYRCHPLFGA--GKSVSEPCWKALARELVNEEY-----LKEATGTSKFCVLCKITPKGRWWLSRA 986
BLAST of NO02G04370 vs. NCBI_GenBank
Match: KRT80493.1 (helicase, partial [Oryctes borbonicus]) HSP 1 Score: 182.6 bits (462), Expect = 6.400e-42 Identity = 159/567 (28.04%), Postives = 258/567 (45.50%), Query Frame = 0 Query: 12 LKACLPEVPIIAVTATATHHVQGDIINQLHLADPMIIRSSINRPNLHYTVKAKSPSSSTSGAMEDLRSILLHPLSXXXXXXXXXXXXSAIVYVSTKAEAEDLTKNLTQNLGITAAAYHGGMTEVARRETYNKWSGDEVRVVCATVAFGMGVDKPDVRMVVCYGLTKSLEDFLQMTGRAGRDGLPSRGVMFWAPKDITTLNFLANHTNGSEQFDGRTAQQQAGANMAKIQEVQRFARQAACRRASLLKHFGESASASALQAAAGDDWQGRCCDFCD---MHGNGVDSTAAQAPGTVLRGSLPAAEYNKAARQVLGAVEKMKSGAKKVLLMLMASEQKDIRTRPDIGRIKAHPAWGAAKGSKQGDGWWQAWLNQLTDEGYAEHRQMKGAREGTMFQVLELSEKGRFFLGEAGAELAPMVANEELVQEEGQIRVLQQRAEA----------------------------REEARRLREXXRMAAQGKEEEVMQXXXXXXXXXXXXXXXXXXXXXXXGGGMKAYQIADEAFLRQLARVRPTTVEGLR--KVGGWAEAKIERFGLAFVDVVK 546 ++ +P VPI+AVTATAT V+ DII+ L + +P II S +RPNL+++V K G + DLR+ + S I+Y +T+ + E +T +L +N GI YH G+T RRE + ++ D+V V+ AT+AFGMG+DKPDVR VV YG K +E + Q GRAGRDG P+ +F++ D+ L L + +E T +Q+ A +Q R+ +CRR +L++FG+++S D + CCD C N V+ + G + + A L ++ M SG +L K + P+ + ++HP G+ G + D WW+ L E Y + + +K R + L L+ KG+ FL + L + LV+ +RVL ++ + + + + ++ + + ++EE M+ Y IA L LAR+RP T++ +R K+ G+ EAKI +FG F+ V++ Sbjct: 195 IRNLVPHVPILAVTATATPKVRNDIISSLQMRNPQIIYSGFDRPNLYFSVYLK----ENRGIIGDLRNAMTR------NDGEWAFSGSTIIYCNTRKQTEQIT-DLLKNQGIQCLTYHAGLTIKQRREIHEQFVRDKVSVIVATIAFGMGIDKPDVRNVVHYGAAKDMESYYQEVGRAGRDGQPANCTIFYSSADLEVLRSLRELSYATEM----TIKQKE----AMVQNFWRYLETTSCRRQFILRYFGDTSSII-------DQAKLNCCDNCTRKLKQKNPVEYEEVNSNGLI--------DITDYAHTFLSSIAIMGSGLGLNTYILFIRGSKGSK-MPE--KHQSHPLHGS--GKHKTDDWWKCIARLLEHESYFKKQTVK--RPTYSYCCLSLTNKGKQFLQDV---LKDREKVQILVEPPPDLRVLLKKKNSTPYDPCWSSQNSAWIKPDSSNLVNTSNDKSDIQHNKKIVDIEDESQKEERMKIYRELLNKRSQLASDL---------NCMPYMIASNEILMNLARLRPRTMDMIRELKLDGFTEAKINKFGEEFIGVIR 708
BLAST of NO02G04370 vs. NCBI_GenBank
Match: XP_019908932.1 (PREDICTED: Werner syndrome ATP-dependent helicase isoform X3 [Esox lucius]) HSP 1 Score: 182.2 bits (461), Expect = 8.300e-42 Identity = 130/410 (31.71%), Postives = 206/410 (50.24%), Query Frame = 0 Query: 12 LKACLPEVPIIAVTATATHHVQGDIINQLHLADPMIIRSSINRPNLHYTVKAKSPSSSTSGAMEDLRSILLHPLSXXXXXXXXXXXXSAIVYVSTKAEAEDLTKNLTQNLGITAAAYHGGMTEVARRETYNKWSGDEVRVVCATVAFGMGVDKPDVRMVVCYGLTKSLEDFLQMTGRAGRDGLPSRGVMFWAPKDITTLNFLANHTNGSEQFDGRTAQQQAGANMAKIQEVQRFARQAACRRASLLKHFGESASASALQAAAGDDWQGRCCDFCDMHG-NGVDSTAAQAPGTVLRGSLPAAEYNKAARQVLGAVEKM--KSGAKKVLLMLMASEQKDIRTRPDIGRIKAHPAWGAAKGSKQGDGWWQAWLNQLTDEGYAEHRQMKGAREGTMFQVL-ELSEKGRFFLGEA 418 LK LP+VPI+A+TATA+ ++ DI+ L+L P++ +S +RPNL+ V KS G ++D++ L S+IVY ++ EAE ++ L+ +LGI YH G+ RRET +++ DE++ + ATVAFGMG++KPD+R V+ YG K +E + Q GRAGRDGLPS + WAP D+ FL N + + G + + ++ ++ + CRR +L HF + G D +CCD C N V T G +Y A Q++GA+ M + G+ +L L S + + P+ + + HP +GA G + W+A L +EGY + A + F +L ++++KGR +L +A Sbjct: 643 LKRALPDVPIVALTATASPSIREDIVKSLNLERPVVTCTSFDRPNLYLEVSRKS-----GGIVQDMKGFL-----KKAAGGDYAFEGSSIVYCPSRKEAERVSSTLS-SLGIACGVYHAGLGIRKRRETQHRFMRDEIQCIVATVAFGMGINKPDIRKVIHYGAPKEMESYYQEIGRAGRDGLPSACHVLWAPADLQLNRFLINQVANN---------RFRGYKLKMMGKMDQYLNSSKCRRKLILSHFEDKQLRKVTSGIMGTD---KCCDNCRSGAVNRVTFTDMVGGG--------CEDYGVLAFQLMGAISAMGERFGSSAPILFLRGSYSQRV---PE--KYRQHPLFGA--GKNVSEACWKALTRHLVNEGY-----LMEATGASKFCILCKITQKGRTWLRQA 1009
BLAST of NO02G04370 vs. NCBI_GenBank
Match: XP_001849186.1 (werner syndrome helicase [Culex quinquefasciatus] >EDS29771.1 werner syndrome helicase [Culex quinquefasciatus]) HSP 1 Score: 180.3 bits (456), Expect = 3.200e-41 Identity = 168/675 (24.89%), Postives = 285/675 (42.22%), Query Frame = 0 Query: 11 LLKACLPEVPIIAVTATATHHVQGDIINQLHLADPMIIRSSINRPNLHYTVKAKSPSSSTSGAMEDLRSILLHPLSXXXXXXXXXXXXSAIVYVSTKAEAEDLTKNLTQNLGITAAAYHGGMTEVARRETYNKWSGDEVRVVCATVAFGMGVDKPDVRMVVCYGLTKSLEDFLQMTGRAGRDGLPSRGVMFWAPKDITTLNFLANHTNGSEQFDGRTAQQQAGANM-AKIQEVQRFARQAACRRASLLKHF-GESASASALQAAAGDDWQGRCCDFCDMHGNGVDSTAAQAPGTVLRGSLPAAEYNKAARQVLGAVEKMKSGAKKVLLMLMASEQKDIRTRPDIGRIKAHPAWGAAKGSKQGDGWWQAWLNQLTDEGY------------------------------AEHRQMKGAREGTMFQVLELSEKGRFFLGEAGAELAPMVANEELVQEEGQIRVLQQRAEAREEARRLREXXRMAAQGKE--EEVMQXXXXXXXXXXXXXXXXXXXXXXXGGGMKAYQIADEAFLRQLARVRPTTVEGLR--KVGGWAEAKIERFGLAFVDVVKKKSAELGLTTDLLWMSPAATSPAAAGVFEVGLAGXXXXXXXXXXXXXXXXXXXXXVETHRLFMEEGKSVREISNDRLKPIKEATVRSYLAQCFMHGLPLAWGRL 650 +++ P VPI+AVTATAT +V+ DI+ L L +P ++ + +RPNL + V+ K S+ G ED++ +L S I+Y T+ + +++ L ++ + AYH G+T R+E + + D V+++ AT+AFGMG+DKPDVR+V+ YG +K LE + Q GRAGRDG PS+ VMFW D T FL +T G +Q N+ A +++ + CRR +L +F G+SA + Q CCD CD +GV + + G G ++ + Q+L A++ G L + + K + R H G + + WW+A L EG+ +R++K MF+ + L F G + + + + R L + +R L + + Q + +E+M+ Y IA L+QLA +RP +E ++ K+ G+++ KI +FG + V++K E + + S ++ S + E LA +T +EG+S+ +I+ +++ + E T+ +L + HG P W +L Sbjct: 164 VVRRICPRVPILAVTATATPNVRQDIVTSLGLREPQVLCTGFDRPNLQFHVRMK----SSLGFWEDVKGLL-----------SRNTEGSIIIYCLTRKQTDEIVDTL-RSCKVQCEAYHAGLTLKQRKEVHESFVRDRVQIIVATIAFGMGIDKPDVRLVIHYGASKDLESYYQEAGRAGRDGQPSKVVMFWNRADFKTHEFLRENTPGGQQ-----------KNLEALSKKMHEYLDTRDCRRQFILNYFEGDSAKPTTSQK--------NCCDNCDRTSSGV-KDSERYEGIDESGQY---DFTQDTEQLLKAIDAFGGGTGIALPIALLRGSKAKKLNESYLRNPLH-----GVGKARDEEWWKALAALLEREGFLNKVKVPNTFNKFAVIYKVQMTPAAKRWLETANRKLKMKPTAEMFKSIRLVRAQPLFDTTNGTQSSDFQPKPK-IASASTFRQLLPMPSSSXSSRLLPDLSAPSKQQDDPVQELMKTLLKKRTELASTYE------------CMPYMIASNLALQQLATLRPQNLEEMKQAKLDGFSDIKIHKFGRELLSCVRRKVREEPVEAESGGSSSSSMSSLQRALLEHPLA---------------KTKFSSTFQTTWNMWQEGRSLADIA--KVRGLAEGTLTGHLCEAIKHGFPFDWRQL 764
BLAST of NO02G04370 vs. NCBI_GenBank
Match: XP_013999819.1 (PREDICTED: Werner syndrome ATP-dependent helicase isoform X1 [Salmo salar]) HSP 1 Score: 180.3 bits (456), Expect = 3.200e-41 Identity = 180/692 (26.01%), Postives = 289/692 (41.76%), Query Frame = 0 Query: 12 LKACLPEVPIIAVTATATHHVQGDIINQLHLADPMIIRSSINRPNLHYTVKAKSPSSSTSGAMEDLRSILLHPLSXXXXXXXXXXXXSAIVYVSTKAEAEDLTKNLTQNLGITAAAYHGGMTEVARRETYNKWSGDEVRVVCATVAFGMGVDKPDVRMVVCYGLTKSLEDFLQMTGRAGRDGLPSRGVMFWAPKDITTLNFLANHTNGSEQFDGRTAQQQAGANMAKIQEVQRFARQAACRRASLLKHFGESASASALQAAAGDDWQGRCCDFCDMHGNGVDSTAAQAPGTVLRGSLPAAEYNKAARQVLGAVEKM--KSGAKKVLLMLMASEQKDIRTRPDIGRIKAHPAWGAAKGSKQGDGWWQAWLNQLTDEGYAEHRQMKGAREGTMFQVL-ELSEKGRFFLGEAGAELAPMVANEELVQEEGQIRVLQQR---------AEAREEARRLREXXRMAAQGKEEEVMQXXXXXXXXXXXXXXXXXXXXXXXGGGMKAYQ----------------------------IADEAFLRQLARVRPTTVEGLRKVGGWAEAKIERFGLAFVDVVKKKSAELGLTTDLLWMSPAATSPAAAGVFEVGLAGXXXXXXXXXXXXXXXXXXXXXVETHRLFMEEGKSVREISNDRLKPIKEATVRSYLAQCFMHGLPLAWGRLELPEGLLEAVKRVM 664 LK LP VPI+A+TATA+ ++ DI+ L+L P++ +S +RPNL+ V KS G +DL L S+IVY ++ EAE +T LT +LG+T YH G+ RRET +++ DE++ + ATVAFGMG++K D+R V+ YG K +E + Q GRAGRDGLPS + WAP D+ FL N + + G + + ++ + + CRR +L HF + G D +CCD C V+ TV G +Y A Q++GAV M + G+ +L L S + + P+ + + HP +GA G + W+A +L +E Y +K A + F +L +++ KGR++L A E + + + L+++ A R+ + ++ + +Q + A + +A L +A++RP TV L++V G +EAK ++K ++ L + S A +P V T+RLF EEGKS+R++S+ R P+ A + + L Q F PL R L + + R++ Sbjct: 630 LKRSLPNVPIVALTATASPSIREDIVKSLNLERPIVTCTSFDRPNLYLDVNRKS-----GGVFQDLNGFL-----KKTTGGDYEFEGSSIVYCPSRKEAERVTSTLT-SLGVTCGVYHAGLGIKQRRETQHRFMRDEIQCIVATVAFGMGINKADIRKVIHYGAPKEMESYYQEIGRAGRDGLPSACHVLWAPADLKLNRFLINQVANN---------KYRGYKLKMMSKMDLYLNSSKCRRKLILSHFEDKQLRKVTSGIMGTD---QCCDNC--RSGAVNRVGVN--DTVEGG---RQDYGVLAFQLMGAVSAMGERFGSAAPILFLRGSYSQRV---PE--KYRCHPLFGA--GKSVSEPCWKALSRELVNEEY-----LKEATGASKFCILCKITPKGRWWLSRALDEKQRTLLLQSSDPDLNTWSALRRKQNPAATITNAPDRQYPTSQNNGLNVCSRPVNSKSIQKLDMSTGRTPTKLLTQVAVSKPQPAPISARELELQTVLYAKLVAERQKLASEKDIPPAILATNKILLDMAKMRPCTVSSLKQVDGVSEAK----SSMLTPLLKTITSFCELHNLKVDSSTQAAAPGPESV-------------RGAVTGRSSSLPNSIAITYRLFQEEGKSMRQVSDVRSLPV--AVLETQLIQAFRANYPLDTERAGLTTAIRTTISRII 1260
BLAST of NO02G04370 vs. NCBI_GenBank
Match: XP_013999829.1 (PREDICTED: Werner syndrome ATP-dependent helicase isoform X2 [Salmo salar] >XP_013999840.1 PREDICTED: Werner syndrome ATP-dependent helicase isoform X2 [Salmo salar] >XP_013999846.1 PREDICTED: Werner syndrome ATP-dependent helicase isoform X2 [Salmo salar] >XP_013999856.1 PREDICTED: Werner syndrome ATP-dependent helicase isoform X2 [Salmo salar] >XP_013999864.1 PREDICTED: Werner syndrome ATP-dependent helicase isoform X2 [Salmo salar]) HSP 1 Score: 180.3 bits (456), Expect = 3.200e-41 Identity = 180/692 (26.01%), Postives = 289/692 (41.76%), Query Frame = 0 Query: 12 LKACLPEVPIIAVTATATHHVQGDIINQLHLADPMIIRSSINRPNLHYTVKAKSPSSSTSGAMEDLRSILLHPLSXXXXXXXXXXXXSAIVYVSTKAEAEDLTKNLTQNLGITAAAYHGGMTEVARRETYNKWSGDEVRVVCATVAFGMGVDKPDVRMVVCYGLTKSLEDFLQMTGRAGRDGLPSRGVMFWAPKDITTLNFLANHTNGSEQFDGRTAQQQAGANMAKIQEVQRFARQAACRRASLLKHFGESASASALQAAAGDDWQGRCCDFCDMHGNGVDSTAAQAPGTVLRGSLPAAEYNKAARQVLGAVEKM--KSGAKKVLLMLMASEQKDIRTRPDIGRIKAHPAWGAAKGSKQGDGWWQAWLNQLTDEGYAEHRQMKGAREGTMFQVL-ELSEKGRFFLGEAGAELAPMVANEELVQEEGQIRVLQQR---------AEAREEARRLREXXRMAAQGKEEEVMQXXXXXXXXXXXXXXXXXXXXXXXGGGMKAYQ----------------------------IADEAFLRQLARVRPTTVEGLRKVGGWAEAKIERFGLAFVDVVKKKSAELGLTTDLLWMSPAATSPAAAGVFEVGLAGXXXXXXXXXXXXXXXXXXXXXVETHRLFMEEGKSVREISNDRLKPIKEATVRSYLAQCFMHGLPLAWGRLELPEGLLEAVKRVM 664 LK LP VPI+A+TATA+ ++ DI+ L+L P++ +S +RPNL+ V KS G +DL L S+IVY ++ EAE +T LT +LG+T YH G+ RRET +++ DE++ + ATVAFGMG++K D+R V+ YG K +E + Q GRAGRDGLPS + WAP D+ FL N + + G + + ++ + + CRR +L HF + G D +CCD C V+ TV G +Y A Q++GAV M + G+ +L L S + + P+ + + HP +GA G + W+A +L +E Y +K A + F +L +++ KGR++L A E + + + L+++ A R+ + ++ + +Q + A + +A L +A++RP TV L++V G +EAK ++K ++ L + S A +P V T+RLF EEGKS+R++S+ R P+ A + + L Q F PL R L + + R++ Sbjct: 615 LKRSLPNVPIVALTATASPSIREDIVKSLNLERPIVTCTSFDRPNLYLDVNRKS-----GGVFQDLNGFL-----KKTTGGDYEFEGSSIVYCPSRKEAERVTSTLT-SLGVTCGVYHAGLGIKQRRETQHRFMRDEIQCIVATVAFGMGINKADIRKVIHYGAPKEMESYYQEIGRAGRDGLPSACHVLWAPADLKLNRFLINQVANN---------KYRGYKLKMMSKMDLYLNSSKCRRKLILSHFEDKQLRKVTSGIMGTD---QCCDNC--RSGAVNRVGVN--DTVEGG---RQDYGVLAFQLMGAVSAMGERFGSAAPILFLRGSYSQRV---PE--KYRCHPLFGA--GKSVSEPCWKALSRELVNEEY-----LKEATGASKFCILCKITPKGRWWLSRALDEKQRTLLLQSSDPDLNTWSALRRKQNPAATITNAPDRQYPTSQNNGLNVCSRPVNSKSIQKLDMSTGRTPTKLLTQVAVSKPQPAPISARELELQTVLYAKLVAERQKLASEKDIPPAILATNKILLDMAKMRPCTVSSLKQVDGVSEAK----SSMLTPLLKTITSFCELHNLKVDSSTQAAAPGPESV-------------RGAVTGRSSSLPNSIAITYRLFQEEGKSMRQVSDVRSLPV--AVLETQLIQAFRANYPLDTERAGLTTAIRTTISRII 1245
BLAST of NO02G04370 vs. NCBI_GenBank
Match: XP_015874825.1 (PREDICTED: ATP-dependent DNA helicase RecQ-like [Ziziphus jujuba]) HSP 1 Score: 179.9 bits (455), Expect = 4.100e-41 Identity = 175/655 (26.72%), Postives = 273/655 (41.68%), Query Frame = 0 Query: 12 LKACLPEVPIIAVTATATHHVQGDIINQLHLADPMIIRSSINRPNLHYTVKAKSPSSSTSGAMEDLRSILLHPLSXXXXXXXXXXXXSAIVYVSTKAEAEDLTKNLTQNLGITAAAYHGGMTEVARRETYNKWSGDEVRVVCATVAFGMGVDKPDVRMVVCYGLTKSLEDFLQMTGRAGRDGLPSRGVMFWAPKDITTLNFLANHTNGSEQFDGRTAQQQAGANMAKIQEVQRFARQAACRRASLLKHFGESASASALQAAAGDDWQGRCCDFCDMHGNGVDSTAAQAPGTVLRGSLPAAEYNKAARQVLGAVEKMKS--GAKKVLLMLMASEQKDIRTRPDIGRIKAH----PAWGAAKGSKQGDGWWQAWLNQLTDEGYAEHRQMKGAREGTMFQVLELSEKGRFFLGEAGAELAP---MVANEELVQEEGQIRVLQQRAEAREEARRLREXXRMAAQGKEEEVMQXXXXXXXXXXXXXXXXXXXXXXXGGGMKAYQIADEAFLRQLARVRPTTVEGLRKVGGWAEAKIERFGLAFVDVVKKKSAELGLTTDLLWMSPAATSPAAAGVFEVGLAGXXXXXXXXXXXXXXXXXXXXXVETHRLFMEEGKSVREISND--RLKPIKEATVRSYLAQCFMHGLPLAWGRLELPEGL 656 L+ LP+VP + +TATAT V+ DII+ L + DP + S +R NL Y VK+ + S+ + S + S S IVY +T+ + E + K+L Q GI AA YHG M AR E++ + DE+ V+ AT+AFGMG+DKP+VR V+ YG KSLE + Q +GR GRDG+ S +++ D +F + Q A + + Q + CRR LL HFGE+ SA+ C+ CD N + S + + ++ A ++ ++ K G + +L S K + + AH P +G KG WW+A L GY + +++ + +S KG +L A + P + E+V EEG I Q +EA E L++ + ++G E Q G G Y I + ++++A RP+T L + G + + G + ++ S +L L+ D AT+ V E +++ E+G SV++I+N+ R PIKE TV YL + G + W R GL Sbjct: 155 LRDVLPDVPFVGLTATATERVRNDIISSLKMKDPYVAIGSFDRQNLFYGVKSFNRGQSSVDELVQEISKFVASTS------------STIVYCTTRNDVEQIYKSL-QEAGIKAAIYHGQMGNKAREESHRLFITDELHVMVATIAFGMGIDKPNVRQVIHYGCPKSLESYYQESGRCGRDGMASVCWLYYTRSDFAKADFYIGELQ---------TENQRKAVVESLMAAQHYCLLTTCRRKFLLNHFGENLSAAK-------------CENCD---NCIISRRER-------------DMSREAFLLMACIQSCKGRWGLNMPVDILRGSRSKKV--------LDAHSDKLPLYGLGKG--YSSNWWKALAYTLISSGYLMETVV------DIYKTVSVSPKGVQYLSSATPDYQPPLVLPVTNEMVAEEGNI---SQSSEAGE----LKKLSTLESEGFSEAEEQ---------LYHMLLEERMKLARGVGTAPYAICGDQTIKKIALTRPSTKARLANIDGVNQYLLMTHGNHVLQTIEHLSRQLNLSLDGEASIQTATTRKVYPV-----------------PSQHRKLTPAKYEAWQMWHEDGLSVQKIANNPARPSPIKEQTVAEYLLEAAQEGFAMDWTRFCAEVGL 709 The following BLAST results are available for this feature:
BLAST of NO02G04370 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G04370 ID=NO02G04370|Name=NO02G04370|organism=Nannochloropsis oceanica|type=gene|length=4479bpback to top protein sequence of NO02G04370.2 >NO02G04370.2-protein ID=NO02G04370.2-protein|Name=NO02G04370.2|organism=Nannochloropsis oceanica|type=polypeptide|length=1035bpback to top protein sequence of NO02G04370.1 >NO02G04370.1-protein ID=NO02G04370.1-protein|Name=NO02G04370.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1189bpback to top Synonyms
Publications
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