Naga_100003g38, gene427 (gene) Nannochloropsis gaditana

Overview
NameNaga_100003g38
Unique Namegene427
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1097590..1103689 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100003g38
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1097590..1103689 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Biological Process
TermDefinition
GO:0006259DNA metabolic process
GO:0009058biosynthetic process
GO:0016043cellular component organization
GO:0006950response to stress
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0000166nucleotide binding
GO:0016787hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL000ngnoL000Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G04370NO02G04370Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna443rna443-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna443rna443Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna443

>rna443-protein ID=rna443-protein|Name=rna443|organism=Nannochloropsis gaditana|type=polypeptide|length=1116bp
MATEEELKSVLQQYWGFQAFRAHQREVIETVIYGRDCLLLMATGRGKSLC
YQFPSLLLRDKKGYRCVTVVVSPLLALIEDQVAGLRANGISALAVGSAAT
NDEVEGALRGDYALLYVTPERLEGWLDSLVTLHNNVGLAALAIDEAHCVS
QWGHDFRPAYLLLYKLREQLPDVPIIAVSATATYHVQEDIIQRLRLDDPL
VIRSGINRPNLHYTVKSKSPGGPMEDLGGILRGSAGSAIVYVLTKAEAEE
LATALTNKLSISASAYHGGLSATVRQQVYNQWSRDEVRVVCATVAFGMGV
DKPDVRTVVCFGLTKSLEDFLQMTGRAGRDGLPSRCVMYWGTRDVGILNF
LATHTNGSEQPEGRSSEEQTASNMAKVQEVQKFARHAGCRRESLLRHFGE
MTSAAALQAAAGTDRCCDYCDLNVEMDAATVMEPGRVVRGSLPKEEYQNA
ARHVLGAVEKMRAGSKKVLLMLAASEQKDIRTRPDIDRIKVHPAWGAAKK
SKQGEAWWKAWLNQLMDEGYVEYRQLQGAHGVIQILELTAKGRLFLGDPS
ATLAPMVASQGLVEAEGQLRVQQQRLEAREEARRQREEERMAARVKEENV
LQALMQVRAQQARNAPDGTKAYQISDESFLRQLALVRPTTVEKLREVGGW
PETKIQRYGQAFLDVIQKKSKELGLTTDCLLLTSALSGAADVRVGEAVPA
DKTAATGVLRPSYLEAHHLYMEQGKSIREIANNRRKPIQEGTVRNYLAQC
FLHGLPLDWSRIAFPPGLLDAVVQAMATLQSTKTKTHDAMKSPPAAIETP
TAARLVSLPNDTPPCGGRGGSSRPFDIYMTRDIKIAVPEFWQGKEASWGD
VETCRIFLTCQQNTTHARQAHTRPPSRAPDSSQSLVGSAGDGEWMTTRKR
PASLAMDNALQGRCTNSKGSQDSKTDSALPHGSDTKKPYQPSYLQNDSAR
DICRSLMDIGGGSCEDGVSADSNAAQGKRLNDTSRLYSAVDSWTQRQTPI
SVNSTPGALKPSISPSPARGHVQTKAETAKMTPKKQDASVQVTATSIRVP
EQKLLPSTAEVIKLLTARPNGLTVGEMLAHLDLAHNTAQENTLRGCVRQL
QNDCVVYMVGERFRLL
back to top
Synonyms
Publications