NO02G04350, NO02G04350 (gene) Nannochloropsis oceanica

Overview
NameNO02G04350
Unique NameNO02G04350
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3006
Alignment locationchr2:1173594..1176599 +

Link to JBrowse

Properties
Property NameValue
DescriptionRAP domain protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:1173594..1176599 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013584RAP
Homology
BLAST of NO02G04350 vs. NCBI_GenBank
Match: EWM30218.1 (RAP domain protein [Nannochloropsis gaditana])

HSP 1 Score: 764.6 bits (1973), Expect = 2.900e-217
Identity = 492/758 (64.91%), Postives = 549/758 (72.43%), Query Frame = 0
Query:    8 EGNQTSKGARRRPRAATAVSI----TSIATLLCCLQHVTHTAAFQSLLPQPPPMPAAPPCHRSRRRPT---SFFSSIAGSSSDGIGFGIDFDELLRSGTNNGSPFGPTSAPTTWRELTSPRLSKXXXXXXXXXXXXXXXXXXXXXRPKAAGIASXXXXXXXXXXXXXXXXXXXXXXXXFP-GRWQATKDESQHMQDRILCAQSDPSEMLRLLFDNPLACNHVNICTVLHRCGKLSGTPSLTPAVDNAITQRLLPVLTLVLPACKGRQLCNVAWALVRLGMPDEELFSRIISRLQANNGALXXXXXXXXXXXXXXXXXXXXMTLQYASFFEMAAEPIAAKAVGLRPREIGLITWAYATWLGNDMKLNGQQLQGLGNVMHGSF--VETAEGRKG-GREGGATATGARKWLLKPMVSLLEATLHVEAQLQAKDIAMIAWAFGKISPMDWNAIGPHVDMLCAVLASSALKSIRRFSAQDLAELSVGVVAMQYDNANLMQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVLEVYDVGLFKEVFARAAADEGLQMLQEGDLNQLYQVYSLLRLQAPEAVKGIGRELLMAMEAAWATSKEKEKRTTKRQAAVVKVLENLQIRYEVEAEHDIDILLPDHGVALEVDGPAHFLRNTGHPMGHTIIKRRLLELMGYNVISVPHFEFDRIPYWSSMELKRYLQRKCETDEVLYFNDLDSSKHKPYPPRGKKTRFD 755
            E    +  +RRRPR  T  ++     S+  L   LQ ++   AFQS        P  P    +  RP      FSS AG SSDG  F + FDE  RS T+NG+   P ++ TTWR+L S R                         P  A                            F  G W+A+K+ESQH Q  IL AQS+P++MLRLL DNP  CNHVN+CTVLHRC +L+GTP LTPA++  ITQ LLPV+  VLPACKGRQLCN+AW+LVRLGMPDE LF   I RLQ   G L                    +T Q+ASFFE AA  +A  AVGLRPREIGLITWAYATWLGND+KLNGQQ +G+G    G +   +  EG  G G   G      RKWL+ PMVSLLEATL VEA LQAKDIAMIAWAFGKI+ +DWNA+GPHVDMLCAVLAS+AL+ IR FSAQDLAELSVGVVAMQYDNANLMQ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TVLEVYDVGLF+EVFARAAADEGL++LQEGDLNQLYQVY LLRLQAPEAV G+GR LL+AME AWA SK++EKRTTKRQAAV KVLE+L IR+ VEAE+DIDILLP+HGVALEVDGPAHFLRNTGHPMGHTI+KRRLLELMGYNVISVPHFEFDRIPYWSSMELKRYLQRKC+T+EVLY+NDLDSS HKPYPPRGKKTRFD
Sbjct:   35 ESPHRTTSSRRRPRQRTVANVMVKWCSVTALFGGLQQLSRGDAFQSTC--SGSSPGLPRVRCNAPRPVFLPPLFSSFAG-SSDG-SFDMSFDEFFRSETSNGNACTPGTS-TTWRDLASHRAPGTPPPRFPRHRQQLGSPLSPPASPALAETTDVALPSDPQRPQAARPPLPGRLGAGFQLGDWRASKEESQHTQSLILQAQSEPADMLRLLLDNPSCCNHVNVCTVLHRCARLAGTPRLTPAIEATITQSLLPVVAEVLPACKGRQLCNLAWSLVRLGMPDEALFDATIDRLQERQGGLLEACNAGELAMVLWAIASAGLTFQHASFFERAAGSLAELAVGLRPREIGLITWAYATWLGNDLKLNGQQQRGMGAGGLGGWESCDAVEGEAGAGWAAGLPGPSGRKWLVAPMVSLLEATLQVEADLQAKDIAMIAWAFGKIAALDWNAMGPHVDMLCAVLASAALRHIRDFSAQDLAELSVGVVAMQYDNANLMQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVLEVYDVGLFREVFARAAADEGLRLLQEGDLNQLYQVYCLLRLQAPEAVTGVGRGLLVAMEEAWAISKDREKRTTKRQAAVAKVLESLHIRHRVEAENDIDILLPEHGVALEVDGPAHFLRNTGHPMGHTIMKRRLLELMGYNVISVPHFEFDRIPYWSSMELKRYLQRKCQTEEVLYYNDLDSSTHKPYPPRGKKTRFD 787          
BLAST of NO02G04350 vs. NCBI_GenBank
Match: CEL94246.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 147.9 bits (372), Expect = 1.300e-31
Identity = 80/208 (38.46%), Postives = 124/208 (59.62%), Query Frame = 0
Query:  555 VLEVYDVGLFKEVFARAAADEGLQMLQEGDLNQLYQVYSLLRLQAPEAVKGIGRELLMAMEAAWATSKEKEKRTTKRQAAVVKVLENLQ-----IRYEVEAEHDIDILLPDHGVALEVDGPAHFLRNTGHPMGHTIIKRRLLELMGYNVISVPHFEFDRIPYWSSMELKRYLQRKCETDEVLYFNDLDSSKHKPY---PPRGKKTRFD 755
            + E YD  LF++++A+ A +E    +    L QLYQ + +L  + P+AV  +    L  + AAW   K++ K +++   A+   L  L      + +  EAEHDIDI L D  +A+EV GP HF  NT  P+GHT++K ++L+L G+ V+ +P++E++R    S+ME KRYLQRK E    L +++ D+S +KPY    P GK +RFD
Sbjct: 1078 ISETYDAQLFRDIYAQ-AQNELPDAISWLALLQLYQAWVVLSAECPDAVSEVDDAFLARLHAAWDRVKKRPKESSEHHRAISACLMTLSEFRCCVNHVTEAEHDIDIALLDRRLAVEVHGPTHFACNTRRPLGHTLLKNKMLQLQGWGVVQIPYWEWERXXXXSTMEKKRYLQRKLEITAPLKYSNRDTSYYKPYIPHAPAGKLSRFD 1284          
BLAST of NO02G04350 vs. NCBI_GenBank
Match: OEU20875.1 (hypothetical protein FRACYDRAFT_167272, partial [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 114.8 bits (286), Expect = 1.200e-21
Identity = 74/235 (31.49%), Postives = 121/235 (51.49%), Query Frame = 0
Query:  567 VFARAAAD-EGLQMLQEGDLNQLYQVYSLLRLQAPEAVKGIGRELLMAMEAAWATSKEKEKRTTKRQAAVVKVLENLQIRYEVEAEHDIDILL--------------------------PDH-GVALEVDGPAHFLR---NTGHP----------------MGHTIIKRRLLELMGYNVISVPHFEFDRIPYWSSMELKRYLQRKCETDEVLYFNDLDSSKHKPYPPRGKKTRFD 755
            +FA AA   +  + +Q    +QL+Q Y +L    PEAVK I +  +  ++  W+  K ++K+++ R  ++   L+ + + +  E + DID+ +                           DH  VA+E DGP HF R   N   P                +GHT++K RLL+  G+ V+ VP++EFD+IP+W+SME +RYLQRK +T   + F+++D S++K   P   K+RFD
Sbjct:  471 IFAEAARSCKKNRSIQLEHAHQLWQAYFMLEEDCPEAVKRIPKWFVTYLKGKWSIEKARDKKSSARHRSLSSTLQLMGVDHINEHDEDIDVAIILQPNAQWVHETDMDDEITDSVIDGEEDHVSVAVEFDGPNHFTRVRINDDEPPAAGAFPPSRPDPPRALGHTVLKYRLLKKQGWTVVRVPYYEFDKIPFWASMERQRYLQRKLKTHANINFSEVDVSEYKELTP-DFKSRFD 704          
BLAST of NO02G04350 vs. NCBI_GenBank
Match: XP_002177034.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51497.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 114.0 bits (284), Expect = 2.000e-21
Identity = 75/224 (33.48%), Postives = 119/224 (53.12%), Query Frame = 0
Query:  561 VGLFKEVFARAAA---DEGLQMLQEGDLNQLYQVYSLLRLQAPEAVKGIGRELLMAMEAAWATSKEKEKRTTKRQAAVVKVLENLQIRYEVEAEHDIDILL---------------PDHGV--ALEVDGPAHFLR-----NTGHP-----MGHTIIKRRLLELMGYNVISVPHFEFDRIPYWSSMELKRYLQRKCETDEVLYFNDLDSSKHKPYPPRGKKTRFD 755
            + L   +FA AAA    +G+  L+    +QL+Q Y LL+  +P  V  +       +   W+  K + K ++ R  ++ + L+ + I ++ E + DID+ +                  GV  A+E DGP HF R     N   P     +GHT++K RLL+  G+ V+ VP++EFD+IPYW+SME +RYLQR  +T   L F+ +D S++K  P   ++TRFD
Sbjct:  703 IRLLSTIFADAAAACEKDGIIQLEHA--HQLWQAYFLLQESSPPVVANVSHWFRDYLRDKWSLEKSRTKLSSARHRSLSQALDLMGIAHKNEHDEDIDVAIVLKKSAVWTHQTKRDGTEGVKLAVEFDGPNHFTRQRKPSNGSKPDVPRALGHTVLKYRLLKKQGWTVVRVPYYEFDKIPYWASMERQRYLQRLLKTHANLRFSQVDVSEYKA-PVPNRETRFD 923          
BLAST of NO02G04350 vs. NCBI_GenBank
Match: GAX15779.1 (hypothetical protein FisN_3Lh221 [Fistulifera solaris])

HSP 1 Score: 110.5 bits (275), Expect = 2.200e-20
Identity = 75/233 (32.19%), Postives = 116/233 (49.79%), Query Frame = 0
Query:  554 TVLEVY----DVGLFKEVF---ARAAADEGLQMLQEGDLNQLYQVYSLLRLQAPEAVKGIGRELLMAMEAAWATSKEKEKRTTKRQAAVVKVLENLQIRYEVEAEHDIDILL------------------PDHGVALEVDGPAHFLRNTG-------HPMGHTIIKRRLLELMGYNVISVPHFEFDRIPYWSSMELKRYLQRKCETDEVLYFNDLDSSKHKPYPPRGKKTRFD 755
            TVLE Y       L  + F   A A   EG   L+    +QL+Q   +L  +  E V  +      A+   W   K + K ++ R  ++  +L  + + +  E + DID+ +                      VA+E DGP HF R+TG         +GHT +K R+L+  G+ V+ VP++EFD+IP+W+SME +RYLQR  +T   + F++LD S++K  P   +KTRFD
Sbjct:  276 TVLEEYRSHESKALLNDFFRDAASACTVEGTIQLEHA--HQLWQALYILDGECQECVSSVPSWFREALRDKWLAEKSRSKTSSLRHKSISDLLRLMGVAHVNEHDEDIDVAIILKSQASWTHETDVMCGTAGMKVAVEFDGPTHFARSTGCHNKVLPRALGHTNLKYRILKRQGWTVVRVPYYEFDKIPFWASMERQRYLQRLLKTHVNIRFSNLDVSEYKT-PISDRKTRFD 505          
BLAST of NO02G04350 vs. NCBI_GenBank
Match: CBN77531.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 110.2 bits (274), Expect = 2.900e-20
Identity = 129/350 (36.86%), Postives = 174/350 (49.71%), Query Frame = 0
Query:  422 LQAKDIAMIAWAFGKISPMDWNAIGPHVDMLCAVLASSALKSIRRFSAQDLAELSVGVVAMQYDNANL--MQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVLEVYDVGLFKEVFARAAADEGLQMLQEGDLNQLYQVYSLLRLQAPEAVKGIGRELLMAMEAAWATSKEKEKRTTKRQAAVVKVLENLQIRY----------------------------EVEAEHDIDILLPDHGVALEVDGPAHFLRNTGHPMGHTIIKRRLLELMGYNVISVPHFEFDRIPYWSSMELKRYLQRKCETDEVLYFNDLDSSKH 742
            L  +D+AM++W F  +S  +     P       VLA +A + +  F  QD++ +S+ +  M +D+  L     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                       V+   DV L +E+   A A  G   L E   +QLYQVY L     PE  K +  E LMA++  W  ++++ KR++     V + L+ +QI +                                              LEVDGPAHF +NT  P+GH ++K R L  MG+ V+S+P  E+D IP+WSSME KRYLQRK      +      ++KH
Sbjct:  331 LTPQDLAMLSWGFSSLS-QECLPCQPAAYRALDVLAKAARECVGNFRPQDVSMVSLALARMSWDDPRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKRMLDGPGMSAQEIANLAWALAVMGEADVELLEELLRSAQAQRGDFTLIES--HQLYQVYLLWGKDMPELWKELDGEFLMALKRRWTDNQQRTKRSSCSHLEVSQTLDLMQISHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEVDGPAHFTKNTARPLGHMVLKHRTLSKMGWTVVSIPFLEWDPIPFWSSMEKKRYLQRKLGITRTILRAPKATAKH 677          
BLAST of NO02G04350 vs. NCBI_GenBank
Match: GAX16296.1 (hypothetical protein FisN_3Hh221 [Fistulifera solaris])

HSP 1 Score: 109.4 bits (272), Expect = 5.000e-20
Identity = 74/233 (31.76%), Postives = 116/233 (49.79%), Query Frame = 0
Query:  554 TVLEVY----DVGLFKEVF---ARAAADEGLQMLQEGDLNQLYQVYSLLRLQAPEAVKGIGRELLMAMEAAWATSKEKEKRTTKRQAAVVKVLENLQIRYEVEAEHDIDILL------------------PDHGVALEVDGPAHFLRNTG-------HPMGHTIIKRRLLELMGYNVISVPHFEFDRIPYWSSMELKRYLQRKCETDEVLYFNDLDSSKHKPYPPRGKKTRFD 755
            TVLE Y       L  + F   A A   EG   L+    +QL+Q   +L  +  E V  +      A+   W   K + K ++ R  ++  +L  + + +  E + DID+ +                      VA+E DGP HF R+TG         +GHT +K R+L+  G+ V+ VP++EFD+IP+W+SME +RYLQR  +T   + F++LD S++K  P   +KTR+D
Sbjct:  424 TVLEEYRSHESKALLNDFFRDAATACTVEGTIQLEHA--HQLWQALYILDGECQECVSSVPSWFREALRDKWLAEKSRSKTSSLRHKSISDLLRLMGVAHVNEHDEDIDVAIILKSQASWTHETDFMCDSAGMKVAVEFDGPTHFARSTGSYNKVLPRALGHTNLKYRILKRQGWTVVRVPYYEFDKIPFWASMERQRYLQRLLKTHVNIRFSNLDVSEYKT-PISDRKTRYD 653          
BLAST of NO02G04350 vs. NCBI_GenBank
Match: XP_002289283.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED92820.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 107.5 bits (267), Expect = 1.900e-19
Identity = 74/240 (30.83%), Postives = 124/240 (51.67%), Query Frame = 0
Query:  554 TVLEVYD---VGLFKEVFARAAADEGLQMLQEGDLNQLYQVYSLLRLQAPEAVKGIGRELLMAMEAAWATSKEKEKRTTKRQAAVVKVLENLQIRYEVEAEHDID---ILLPDHG-----------------VALEVDGPAHF--LRNTG--------------HPMGHTIIKRRLLELMGYNVISVPHFEFDRIPYWSSMELKRYLQRKCETDEVLYFNDLDSSKHKPYPPRGKKTRFD 755
            TVL  YD   V L + +   AA+  G  ++Q    +QL+Q Y LL    P AV+ +  E    +E  W   K + K+++ R   + + LE +++ +  E + D+D   +L  D                   VA+E DGP HF  + +TG                +GHT++K RLL+  G+ V+ +P++E+D+IP ++SME +RYLQR  +T E + F+ +D S+++   P+ + +RFD
Sbjct:  600 TVLGHYDSDVVALLQNI-VHAASSSGDGVIQLEHAHQLWQSYFLLSEDCPAAVEFVPAEFSQFLEKKWNIEKNRGKQSSSRHRTISQTLELMRVAHRNEYDEDVDVAIVLQEDSSWTHTAQKDLDNQEGRVKVAVEFDGPFHFTVMASTGKDLTMIENGVKIAPRVLGHTVLKYRLLKKKGWAVVRIPYYEWDKIPSFASMERQRYLQRALKTHETISFSGVDVSQYQAM-PQTRHSRFD 837          
BLAST of NO02G04350 vs. NCBI_GenBank
Match: OAE24536.1 (hypothetical protein AXG93_2415s1150 [Marchantia polymorpha subsp. ruderalis])

HSP 1 Score: 84.0 bits (206), Expect = 2.200e-12
Identity = 50/132 (37.88%), Postives = 73/132 (55.30%), Query Frame = 0
Query:  581 QEGDLNQLYQVYSLLRLQAPEAVKGIGRELLMAMEAAWATSKEKEKRTTKRQAAVVKVLENLQIRYEVE---AEHDIDILLPDHGVALEVDGPAHFLRNTGHPMGHTIIKRRLLELMGYNVISVPHFEFDRI 710
            Q   L+QL+QV   L L+ PE     G  L    E+ W   K  +K T+  Q  V  +L +   ++  E   A H +D  L +  +ALE+DGP HF RNTG  +GHT++KRR L   G+ V+S+P+ E+D +
Sbjct:  608 QTMQLSQLHQVTLSLELEYPELDLLPGEPLRSMAESEWEKLKIGKKSTSTTQRDVEILLTSTGRQWVGEYSAASHSLDAALVEERIALEIDGPTHFARNTGRALGHTVLKRRQLSAAGWIVLSIPYQEWDEL 739          
BLAST of NO02G04350 vs. NCBI_GenBank
Match: PTQ26897.1 (hypothetical protein MARPO_0276s0001 [Marchantia polymorpha] >PTQ35697.1 hypothetical protein MARPO_0069s0042 [Marchantia polymorpha] >PTQ35698.1 hypothetical protein MARPO_0069s0042 [Marchantia polymorpha])

HSP 1 Score: 84.0 bits (206), Expect = 2.200e-12
Identity = 50/132 (37.88%), Postives = 73/132 (55.30%), Query Frame = 0
Query:  581 QEGDLNQLYQVYSLLRLQAPEAVKGIGRELLMAMEAAWATSKEKEKRTTKRQAAVVKVLENLQIRYEVE---AEHDIDILLPDHGVALEVDGPAHFLRNTGHPMGHTIIKRRLLELMGYNVISVPHFEFDRI 710
            Q   L+QL+QV   L L+ PE     G  L    E+ W   K  +K T+  Q  V  +L +   ++  E   A H +D  L +  +ALE+DGP HF RNTG  +GHT++KRR L   G+ V+S+P+ E+D +
Sbjct:  569 QTMQLSQLHQVTLSLELEYPELDLLPGEPLRSMAESEWEKLKIGKKSTSTTQRDVEILLTSTGRQWVGEYSAASHSLDAALVEERIALEIDGPTHFARNTGRALGHTVLKRRQLSAAGWIVLSIPYQEWDEL 700          
The following BLAST results are available for this feature:
BLAST of NO02G04350 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30218.12.900e-21764.91RAP domain protein [Nannochloropsis gaditana][more]
CEL94246.11.300e-3138.46unnamed protein product [Vitrella brassicaformis C... [more]
OEU20875.11.200e-2131.49hypothetical protein FRACYDRAFT_167272, partial [F... [more]
XP_002177034.12.000e-2133.48predicted protein [Phaeodactylum tricornutum CCAP ... [more]
GAX15779.12.200e-2032.19hypothetical protein FisN_3Lh221 [Fistulifera sola... [more]
CBN77531.12.900e-2036.86conserved unknown protein [Ectocarpus siliculosus][more]
GAX16296.15.000e-2031.76hypothetical protein FisN_3Hh221 [Fistulifera sola... [more]
XP_002289283.11.900e-1930.83predicted protein [Thalassiosira pseudonana CCMP13... [more]
OAE24536.12.200e-1237.88hypothetical protein AXG93_2415s1150 [Marchantia p... [more]
PTQ26897.12.200e-1237.88hypothetical protein MARPO_0276s0001 [Marchantia p... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007098NSK007098Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G04350.1NO02G04350.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|575057gene_1024Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100003g41gene424Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G04350.1NO02G04350.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G04350 ID=NO02G04350|Name=NO02G04350|organism=Nannochloropsis oceanica|type=gene|length=3006bp
TGTTCAGTTCAACGATAGGCTTGAGGAGGCTTTGTCCACTGCAACTGATC
CTGGGTGGGTGGACAGCGTATCCACCGTCATCATGAAGCTTATGCGCACC
TTTGTCAGATTCAGAAACGCCGCAGAGAAAGAAGGAAAGATTTTGTCCAA
GGCCTTGGACTGGCGAGGCGAGGTAGGAGGCCTCGACCAGTAGCAGCGGC
AACAACAACAAGCAGCCCTAAAGCATTGCTTCTTTGATTTTGTGGGAAGG
GAGGAGGCCAACAATGAGCGATGCTACACACGACCTGCACTGCGATGCTG
CAGCTACAACTCGCGTCGACCACCTGAGCTGTATTACTCCAGCCCGTTGG
ACACCCGACCAATTCATGCTCTTCAACCTCTGACATTGGGTGATGCCCAT
CTAACCCTATTCCCATCCTCCTTACATATTACAATCACAACGAGTCAGGC
GACAAAGCAGTTCCTTGAATGGTGGCAAGGGTAGCGCGGGCATATAGCAC
TCTATCCAGCCTGCCAATTCGACTAGCACCATGCCAAGACCAGCCGAATT
AGAGGGAAATCAGACCTCAAAAGGTGCCCGCAGGCGGCCACGGGCAGCAA
CAGCAGTGAGCATCACATCTATCGCCACTCTTTTGTGTTGCCTGCAGCAT
GTTACACACACCGCCGCTTTTCAATCCCTCCTCCCCCAACCACCACCAAT
GCCAGCAGCACCACCATGCCACCGCAGCCGACGAAGACCGACCTCCTTCT
TTTCCTCCATTGCGGGCAGCAGCAGCGATGGAATCGGCTTCGGCATCGAT
TTTGACGAGCTATTGCGCAGCGGCACCAATAACGGCAGCCCCTTCGGGCC
TACCTCCGCGCCAACGACCTGGCGAGAACTGACATCACCTCGCCTTTCTA
AGCAGCAGCAGAAGCACCAGCACCAGCACCAGCACACGCCTTTCCCTACT
CAACCATCATCCACCAGGCCTAAGGCTGCTGGTATCGCTTCCCCTGCAGG
CCAACAGCAACCACAACATCGCACCACGAAGCCCTCCTCCTCTTCATCCT
CCTCTTCCTCCTCCTTCCCCGGCAGATGGCAAGCCACCAAAGACGAATCC
CAACACATGCAAGACCGCATCCTCTGTGCCCAATCCGATCCCTCCGAGAT
GTTGCGCCTTCTGTTCGACAACCCTCTCGCCTGCAACCACGTGAATATCT
GCACCGTCCTTCACCGTTGTGGCAAGCTTTCAGGGACTCCTAGTCTTACG
CCGGCGGTCGACAATGCCATAACCCAACGCCTCCTCCCCGTCCTCACCCT
CGTTCTCCCAGCGTGCAAAGGCCGGCAGCTGTGTAACGTAGCATGGGCGC
TCGTCCGCCTGGGCATGCCAGATGAGGAGCTCTTCTCCCGAATAATTAGT
CGACTCCAAGCGAACAACGGCGCGTTGCTCGAAGCGTGTAATGCGGGAGA
GCTGGCGATGGTTCTATGGGCCATAGCTTCCGCAGGAATGACACTACAGT
ATGCGTCATTTTTTGAAATGGCTGCAGAACCCATAGCGGCGAAGGCTGTG
GGTCTAAGGCCAAGGGAAATCGGTTTGATCACCTGGGCGTATGCGACATG
GCTCGGAAATGACATGAAACTGAATGGACAGCAGCTTCAAGGGTTGGGGA
ATGTTATGCATGGCAGTTTTGTTGAGACTGCTGAAGGGAGGAAAGGAGGG
AGGGAGGGGGGGGCGACGGCGACGGGTGCGAGGAAGTGGCTCTTGAAGCC
AATGGTGTCCTTGTTGGAGGCAACATTGCACGTCGAGGCCCAATTACAAG
CGAAAGACATCGCCATGATTGCGTGGGCATTCGGCAAGATCTCTCCGATG
GATTGGAATGCCATAGGTCCGCATGTGGACATGCTTTGTGCCGTCCTTGC
GTCCTCAGCGCTGAAATCCATTCGCCGATTCAGTGCCCAGGACCTTGCGG
AGCTATCTGTTGGGGTGGTTGCGATGCAATACGATAATGCCAACCTCATG
CAACTCGTCGCTTACGAAGCCACGCGGAAACTCCGGTCCTTCTCCCATCG
CGAGCTCAGCAATATTATTTGGGCTTATGGAAAGGTTTTCCGTCGTCCCC
GGAAGTTTGTGTTGGCGGCAGCAGCGGAGGCACGGGTAAGGCTCCCTCAT
TTCACCCCCACGGAGCTGGCGAACGTGGCGTGGGCATTGACAGTGTTGGA
GGTATATGATGTCGGGCTTTTCAAGGAAGTTTTTGCGAGGGCAGCGGCGG
ATGAGGGACTGCAGATGCTACAGGAAGGGGATTTGAATCAACTGTATCAA
GTATATAGCCTGTTGAGGTTACAGGCACCCGAGGCCGTGAAAGGCATAGG
AAGGGAGTTGTTGATGGCCATGGAAGCAGCTTGGGCGACAAGCAAGGAGA
AGGAGAAGAGAACTACCAAGCGGCAGGCGGCCGTGGTGAAGGTCTTGGAG
AATTTGCAGATCCGTTACGAGGTGGAAGCGGAGCATGACATTGATATCCT
CTTACCCGACCATGGGGTTGCCTTGGAAGTGGATGGCCCCGCACACTTTT
TGAGAAACACTGGACATCCGATGGGACATACGATAATCAAACGGCGGCTA
TTGGAATTGATGGGGTATAATGTCATCTCGGTGCCACATTTTGAGTTTGA
TCGGATTCCTTACTGGTCGTCCATGGAACTGAAGAGGTACTTGCAACGGA
AGTGTGAGACGGACGAGGTGCTCTATTTCAATGACTTGGACTCATCCAAA
CATAAGCCTTATCCGCCTCGGGGTAAGAAGACGCGGTTCGATTGACTAGA
ATCTCTGAGTGTGGACGAGAATTTAGCAATGAGGGAGGGGGAAGGGCGCG
AGAGTGTTTAAGCGCGTGTGTAGAAGAAAAACATGCCGTTTTGAGCGTTA
TGGAAGGCGAGAGCGAACGAGAGCAAATGCGGTGTTTTGTATAAATAGTC
TGTGCGTGGATGAGTTTAAAGTTGGGTCATGTAGACGCAGGGGATAGAAA
GGGGGG
back to top

protein sequence of NO02G04350.1

>NO02G04350.1-protein ID=NO02G04350.1-protein|Name=NO02G04350.1|organism=Nannochloropsis oceanica|type=polypeptide|length=755bp
MPRPAELEGNQTSKGARRRPRAATAVSITSIATLLCCLQHVTHTAAFQSL
LPQPPPMPAAPPCHRSRRRPTSFFSSIAGSSSDGIGFGIDFDELLRSGTN
NGSPFGPTSAPTTWRELTSPRLSKQQQKHQHQHQHTPFPTQPSSTRPKAA
GIASPAGQQQPQHRTTKPSSSSSSSSSSFPGRWQATKDESQHMQDRILCA
QSDPSEMLRLLFDNPLACNHVNICTVLHRCGKLSGTPSLTPAVDNAITQR
LLPVLTLVLPACKGRQLCNVAWALVRLGMPDEELFSRIISRLQANNGALL
EACNAGELAMVLWAIASAGMTLQYASFFEMAAEPIAAKAVGLRPREIGLI
TWAYATWLGNDMKLNGQQLQGLGNVMHGSFVETAEGRKGGREGGATATGA
RKWLLKPMVSLLEATLHVEAQLQAKDIAMIAWAFGKISPMDWNAIGPHVD
MLCAVLASSALKSIRRFSAQDLAELSVGVVAMQYDNANLMQLVAYEATRK
LRSFSHRELSNIIWAYGKVFRRPRKFVLAAAAEARVRLPHFTPTELANVA
WALTVLEVYDVGLFKEVFARAAADEGLQMLQEGDLNQLYQVYSLLRLQAP
EAVKGIGRELLMAMEAAWATSKEKEKRTTKRQAAVVKVLENLQIRYEVEA
EHDIDILLPDHGVALEVDGPAHFLRNTGHPMGHTIIKRRLLELMGYNVIS
VPHFEFDRIPYWSSMELKRYLQRKCETDEVLYFNDLDSSKHKPYPPRGKK
TRFD*
back to top
Synonyms
Publications