NO02G04240, NO02G04240 (gene) Nannochloropsis oceanica

Overview
NameNO02G04240
Unique NameNO02G04240
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1313
Alignment locationchr2:1153149..1154461 -

Link to JBrowse

Properties
Property NameValue
DescriptionD-glutamate cyclase, mitochondrial
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:1153149..1154461 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR025504DUF4392
Homology
BLAST of NO02G04240 vs. NCBI_GenBank
Match: XP_019629429.1 (PREDICTED: UPF0317 protein C14orf159 homolog, mitochondrial-like [Branchiostoma belcheri])

HSP 1 Score: 151.0 bits (380), Expect = 6.900e-33
Identity = 116/350 (33.14%), Postives = 173/350 (49.43%), Query Frame = 0
Query:    8 IATLEAAVQRDEGKRGLTDLVLPAGELETAASALYHAPGPIAILTGFPCMLDHIPPTETDGPPGALAIIQACLALNKPCILLVEESNAAVLSAGVA-AVEDMSVNLRVEVFP-PKTKWGPTEDARLCQL--------AQEITFVVAIERTGPGASDGHYYTMRGKQMDEVVAPLERLLDLVPESVHSI---GIGDGGNEVGMGKVLDRILASTIISKARQIACCTSTSWLLAASVSNWGGYALCCALAAVAAEVEATYTTAKRGKDGDKIKTDCMSNAKGMRNPANDGMGRRRGKWVERLVVSEAQDQRVLEAIVAAGARDGITGERKEWVDGMPKETSSA-MLRELREI 344
            I  LE A+Q D GKRG++ L +P GEL   A AL HA   +AI TGFPC  +  PP E DGPPGA+A+     AL K   ++++ +   ++   V   V+   +   V V P P T    T+     Q               +VAIER G  A+DG Y +M+ K +  +V+P+++L D+  E +  I   GIGDGGNE+GMG++ D++     I    QIAC     + + A VSNWGG+A+  AL  + A                     C  + +  R     G  R   K +  + + E ++++V+  ++  G RDG+T E    VDG+   T  A M++ LR +
Sbjct:  338 IQRLEKAIQADPGKRGISHLHIP-GELLRCALALSHA-SSVAITTGFPCHTELTPPEENDGPPGAVAMAAMLQALGKQVTMVIDTNRLQLIRDIVEDCVQAGILQEPVAVLPYPPTNGTVTDKQVALQFLTHDGDISRPRYDHLVAIERVG-RAADGTYRSMKAKDLSSLVSPIDQLFDVANEEIPGIKTTGIGDGGNELGMGRLQDKV--HQFIPNGPQIACAVPADYTITAGVSNWGGWAIAAALYVLRA---------------------CPIHDRYQRRAV--GFPRDSTKLLGAVPLME-REEKVMSIMIKHGLRDGMTAELGMVVDGLQFATEHAQMMKNLRSV 658          
BLAST of NO02G04240 vs. NCBI_GenBank
Match: XP_002609465.1 (hypothetical protein BRAFLDRAFT_226600 [Branchiostoma floridae] >EEN65475.1 hypothetical protein BRAFLDRAFT_226600, partial [Branchiostoma floridae])

HSP 1 Score: 149.1 bits (375), Expect = 2.600e-32
Identity = 113/355 (31.83%), Postives = 173/355 (48.73%), Query Frame = 0
Query:    8 IATLEAAVQRDEGKRGLTDLVLPAGELETAASALYHAPGPIAILTGFPCMLDHIPPTETDGPPGALAIIQACLALNKPCILLVEESNAAVL--------SAGVAAVEDMSVNLRVEVFPPKTKWGPTEDARLCQLAQE-------ITFVVAIERTGPGASDGHYYTMRGKQMDEVVAPLERLLDLVPESVHSI---GIGDGGNEVGMGKVLDRILASTIISKARQIACCTSTSWLLAASVSNWGGYALCCALAAVAAEVEATYTTAKRGKDGDKIKTDCMSNAKGMRNPANDGMGRRRGKWVERLVVSEAQDQRVLEAIVAAGARDGITGERKEWVDGMPKETSSAMLRE-LREI 344
            I  LE  VQ D GKRG++DL +P GEL     +L HA   +A++TGFPC  +  P  E DGPPGA+A+     AL K   ++++ S   ++          GV  +++    + V  +PP     P  D+ L  L  +          +VAIER G  A+DG Y TM+ + +  +V+P+++L D+  E +  I   GIGDGGNE+GMG+V +++     I    +IAC     + + A VSNWGG+A+   L  + A                 I    +  A G    ++  +G          V S  ++++V+  ++  G RDG+T E    VDG+   T  A + E LR I
Sbjct:  266 IHRLEKVVQADPGKRGISDLHIP-GELLQCVLSLSHA-SSVAVMTGFPCHTELTPSEENDGPPGAVAMAAMLQALGKQVTMVMDASRLQLMRDIVEDCVQTGVCILKE---GVAVLPYPPTNGTAPDRDSALQFLTHDGDVSRPRYDHLVAIERVG-RAADGTYRTMKAQDISSLVSPIDQLFDVANEEIPGIKTTGIGDGGNELGMGRVQEKV--HQFIPNGPEIACTVPADYTITAGVSNWGGWAVAAGLYVLQA---------------CPIHDRYLRRAVGFPRDSHKLLGS---------VPSLEREEKVMSVMMKHGLRDGMTAEPGLVVDGLQFGTEHAQIMENLRSI 588          
BLAST of NO02G04240 vs. NCBI_GenBank
Match: CEM04142.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 147.9 bits (372), Expect = 5.800e-32
Identity = 129/368 (35.05%), Postives = 170/368 (46.20%), Query Frame = 0
Query:    9 ATLEAAVQRDEGKRGLTDLVLPAGELETAASA-LYHAP--GPIAILTGFPCMLDHIPPTETDGPPGALAIIQACLALNKPCILLVEES-NAAVLSAGVAAVEDM-----SVNLRVEVFPPKT--------------KWGPTED----ARLCQLAQEITFVVAIERTGPGASDGHYYTMRGKQMDEVVAPLERL----LDLVPESVHSI--GIGDGGNEVGMGKVLDRILASTIISKARQIACCTSTSWLLAASVSNWGGYALCCALAAVAAEVEATYTTAKRGKDGDKIKTDCMSNAKGMRNPANDGMGRRRGKWVERLVVSEAQDQRVLEAIVAAGARDGITGERKEWVDGMPKETSSAMLRELREI 344
            A+LE   Q+DEG RG+  L+ P  +     SA L   P    + ILTGFPC  D  PPTETDGPPGALA+ +  L  +K  ++L+ +  N A L A VAA   +     +  L VE F P                K           RL  L +E+  +VA+ER+G  A+DG YYTMRG  M   VAPL+ L    L    + +  +   IGDGGNE+G+GKV  R   +  I K  QIAC  S   L+ ASVSNWG YAL    +A+                                  A DG         + L  ++A +++V  A+  AG RDG T E    VDG P   +   +  +REI
Sbjct:   21 ASLEHLTQKDEGGRGIRQLLGPETDDGLRRSAFLLSQPHVRRVGILTGFPCNRDSHPPTETDGPPGALAVAKCLLRGHKEAVVLLTDGINEAPLLAAVAAHPYLHKALANKRLTVESFHPAEFCENGSCIASVPLHKLADRRQLPGVRRLRALWEELDHLVAVERSG-RAADGRYYTMRGLDMTSDVAPLDILFHWSLTGPQDGIRPLTTAIGDGGNELGLGKVAHR--TAQHIPKGAQIACAVSCHSLIVASVSNWGAYALAALTSALMVF-------------------------------AGDGSFS-----FDELFTTDADERQVAAALCEAGVRDGATKELAMTVDGFPMHETFKRVDRMREI 349          
BLAST of NO02G04240 vs. NCBI_GenBank
Match: XP_007908317.1 (PREDICTED: UPF0317 protein C14orf159 homolog, mitochondrial [Callorhinchus milii])

HSP 1 Score: 147.5 bits (371), Expect = 7.600e-32
Identity = 116/351 (33.05%), Postives = 170/351 (48.43%), Query Frame = 0
Query:    2 SSTAAVIATLEAAVQRDEGKRGLTDLVLPAGELETAASALYHAPGPIAILTGFPCMLDHIPPTETDGPPGALAIIQACLALNKPCILLVEESNAAVLSAGV--AAVEDMSVNLRVEVFPPKTKWGPTEDARLCQ----LAQEITFVVAIERTGPGASDGHYYTMRGKQMDEVVAPLERLLDLVPE--SVHSIGIGDGGNEVGMGKVLDRILASTIISKARQIACCTSTSWLLAASVSNWGGYALCCALAAVAAEVEATYTTAKRGKDGDKIKTDCMSNAKGMRNPANDGMGRRRGKWVERLVVSEAQDQRVLEAIVAAGARDGITGERKEWVDGMP-KETSSAMLRELREI 344
            +ST  VI  LEA +Q+D G RG+  L +   +L  AA +L HA   + + TGFP    H PP ETDGPPGALA+     AL K  + +V +  A  L   +   AVE   +   V +   +     +  + LC      +     ++AIER+G  A DG+YY  R   +  +V P+++L     E   + + GIGDGGNE+GMGKV + +     I+    IAC     + + A VSNWGGYAL CAL  +                       C  +A+ +R       G  R  W   L  S  ++ ++L+ +V  G R G+TG     VDG+P  +  S+++R+L  I
Sbjct:  302 ASTLDVIRELEALIQQDPGNRGIRHLTM-KDQLLKAALSLSHA-NSVLLTTGFPTHFRHQPPEETDGPPGALAMATMLQALKKD-VAIVTDQRALELYRKIIEEAVEQGVLEAAVPLLSFQDTGVDSALSFLCHDGRANSPRYDHLIAIERSGM-AMDGNYYNARKVNIKHLVDPIDKLFLAAREVPGISTTGIGDGGNELGMGKVKEAV--KKYITNGDLIACDVEADFAIIAGVSNWGGYALACALYLLNC---------------------CSVHARYLRRAIGFPNGSERNAWTSAL-PSVNKEDKLLQILVKHGIRSGVTGNLGMEVDGLPFHDVHSSLIRQLLTI 624          
BLAST of NO02G04240 vs. NCBI_GenBank
Match: OQR89919.1 (hypothetical protein ACHHYP_05944 [Achlya hypogyna])

HSP 1 Score: 146.7 bits (369), Expect = 1.300e-31
Identity = 112/334 (33.53%), Postives = 153/334 (45.81%), Query Frame = 0
Query:   15 VQRDEGKRGLTDLV---LPAGELETAASALYHAP--GPIAILTGFPCMLDHIPPTETDGPPGALAIIQACLALNK-PCILLVEESNAAVLSAGVAAVEDMSVNLRVEVFPPKTKWGPTEDARLCQLAQEITFVVAIERTGPGASDGHYYTMRGKQMDEVVAPLERLLDLV-PESVHSIGIGDGGNEVGMGKVLDRILASTIISKARQIACCTSTSWLLAASVSNWGGYALCCALAAVAAEVEATYTTAKRGKDGDKIKTDCMSNAKGMRNPANDGMGRRRGKWVERLVVSEAQDQRVLEAIVAAGARDGITGERKEWVDGMPKETSSAMLRELR 342
            V  D G RG+T L+           A  AL   P    +AILTGFPC+LD+ PPTETDG  GA A+I A   + +    +L +E NA VL + + A    +  L    FPP  +W      +L  L   +   VAIER G  A DG YYTMR + M  +VAPL++         + +I IGDGGNE+GMG V     A   +     IA       L+ A +S+WG YALC  LA              R ++ D + T                            VV+      +  A++AAGARDGI G +  +VDG+P   +  ++  +R
Sbjct:    8 VHHDIGGRGMTHLLDGPRDRAHFSEAIEALSRLPPGSDVAILTGFPCLLDYTPPTETDGLGGACALIHALHVIGRHRAHILTDEVNAVVLKSCIEAAAVAATVL--HSFPPANEWTHATQVKLEALYSTMGAYVAIERAG-AAEDGRYYTMRARDMTAIVAPLDQCFAYAKSHGIPTIAIGDGGNELGMGNVSAATKAK--VRNGETIAAKLGCDHLIVACISDWGAYALCAGLAL-------------RHRNSDALLT-------------------------RETVVA------IANAMIAAGARDGILGCQDTFVDGLPLVETLNLVHAMR 292          
BLAST of NO02G04240 vs. NCBI_GenBank
Match: OQR91013.1 (inositol-3,4-bisphosphate 4-phosphatase [Thraustotheca clavata])

HSP 1 Score: 143.3 bits (360), Expect = 1.400e-30
Identity = 112/334 (33.53%), Postives = 164/334 (49.10%), Query Frame = 0
Query:   15 VQRDEGKRGLTDLVLPAGELET---AASALYH-AP-GPIAILTGFPCMLDHIPPTETDGPPGALAIIQACLALNKPCI-LLVEESNAAVLSAGVAAVEDMSVNLRVEVFPPKTKWGPTEDARLCQLAQEITFVVAIERTGPGASDGHYYTMRGKQMDEVVAPLERLLDLV-PESVHSIGIGDGGNEVGMGKVLDRILASTIISKARQIACCTSTSWLLAASVSNWGGYALCCALAAVAAEVEATYTTAKRGKDGDKIKTDCMSNAKGMRNPANDGMGRRRGKWVERLVVSEAQDQRVLEAIVAAGARDGITGERKEWVDGMPKETSSAMLRELR 342
            VQ D GKRG++ L+    + +    A  A+ + AP   IA+LTGFPC+L+  PPTETDG  G  A+I A   L +  I +L ++ NA V++A VA    M+++  V VFP    W     A L  L   I   +AIER G  A +GHYYTMR + M ++VAPL++         + +I IGDGGNE+GMG V   ++  + I     IA   +  +L+ A +S+WG Y+LC  +A                            + KG                   ++V ++   +V + +  AGARDGI G +  +VDG+P   +   L  LR
Sbjct:   15 VQDDIGKRGMSHLLQWERDQKAFLGAVEAISNLAPESHIALLTGFPCLLECSPPTETDGINGTCALIYALHQLGRHHIHVLTDQVNANVIAACVALFPQMTIS--VHVFPGTKAWTAQAQADLEALYSIIQLYIAIERAG-AADNGHYYTMRARDMTDIVAPLDQCFAYAQAHGIPTIAIGDGGNELGMGNV--SVITKSKIRNGDIIATKQTCDYLIIACISDWGAYSLCAGIA----------------------------HCKG-----------------HHILVPQSIVVQVAKTMADAGARDGILGCQDTFVDGLPLVETLNTLHTLR 298          
BLAST of NO02G04240 vs. NCBI_GenBank
Match: XP_016061189.1 (PREDICTED: UPF0317 protein C14orf159 homolog, mitochondrial [Miniopterus natalensis])

HSP 1 Score: 140.6 bits (353), Expect = 9.300e-30
Identity = 117/352 (33.24%), Postives = 171/352 (48.58%), Query Frame = 0
Query:    2 SSTAAVIATLEAAVQRDEGKRGLTDLVLPAGELETAASALYHAPGPIAILTGFPCMLDHIPPTETDGPPGALAIIQACLALNKPCILLVEESNAAVLSAGVA-AVEDMSVNLRVEVFPPKTKWGPTEDARLCQ----LAQEITFVVAIERTGPGASDGHYYTMRGKQMDEVVAPLERLL---DLVPESVHSIGIGDGGNEVGMGKVLDRILASTIISKARQIACCTSTSWLLAASVSNWGGYALCCALAAV-AAEVEATYTTAKRGKDGDKIKTDCMSNAKGMRNPANDGMGRRRGKWVERLVVSEAQDQRVLEAIVAAGARDGITGERKEWVDGMP-KETSSAMLRELREI 344
            +S    I  LEA +  D G RG+  L L   EL  A+ +L HA   + I TGFP   +H PP ETDGPPGA+A+     AL K   L+V++   ++    VA AVE   +   + +   +        A LC      +     +VAIER G  A+DG+YY  R   +  +V P++ L      +P  + S G+GDGGNE+GMGKV + +   + I     IAC     + + A VSNWGGYAL CAL  + + EV   Y     G           S A G +N            W E L  S ++++++L  +V    R G++G     VDG+P   T + M+++L ++
Sbjct:  294 ASAVQKIRELEAIIAVDPGNRGIGHL-LRKDELLRASLSLSHAYS-VLITTGFPTHFNHEPPEETDGPPGAIALAAFLQALEKGVSLIVDQRALSLFKKLVAEAVEQGVLKTPIPILTYQEGPAGAAQAFLCNERDPKSPRFDHLVAIERAG-RAADGNYYNARKMNIKHLVDPIDDLFLAAQKIP-GISSTGVGDGGNELGMGKVKEAV--KSHIRNGDVIACDVEADFAVIAGVSNWGGYALACALYILNSCEVHGRYLRKATGP----------SRAPGEQN------------WTEAL-PSISKEEKMLSILVQHRVRSGVSGNVGMEVDGLPFHGTHAEMIQKLLDV 616          
BLAST of NO02G04240 vs. NCBI_GenBank
Match: XP_023783460.1 (D-glutamate cyclase, mitochondrial isoform X3 [Cyanistes caeruleus] >XP_023783461.1 D-glutamate cyclase, mitochondrial isoform X3 [Cyanistes caeruleus] >XP_023783462.1 D-glutamate cyclase, mitochondrial isoform X3 [Cyanistes caeruleus] >XP_023783463.1 D-glutamate cyclase, mitochondrial isoform X3 [Cyanistes caeruleus] >XP_023783464.1 D-glutamate cyclase, mitochondrial isoform X3 [Cyanistes caeruleus])

HSP 1 Score: 140.6 bits (353), Expect = 9.300e-30
Identity = 113/355 (31.83%), Postives = 168/355 (47.32%), Query Frame = 0
Query:    2 SSTAAVIATLEAAVQRDEGKRGLTDLVLPAGELETAASALYHAPGPIAILTGFPCMLDHIPPTETDGPPGALAIIQACLALNKPCILLVEESNAAVLSAGVAAVEDMSVNLRVEVFPPKTKWGPTEDARLCQLAQ-------EITFVVAIERTGPGASDGHYYTMRGKQMDEVVAPLERLL---DLVPESVHSIGIGDGGNEVGMGKVLDRILASTIISKARQIACCTSTSWLLAASVSNWGGYALCCALAAVAAEVEATYTTAKRGKDGDKIKTDCMSNAKGMRNPANDGMGRRRGKWVERLVVSEAQDQRVLEAIVAAGARDGITGERKEWVDGMP-KETSSAMLRELREIAR 346
            +  A  I TLE  +  D G+RG+  L    GEL  A  A+ HA G + + TGFP    H PP E DGPPGALAI     AL K  + +V +  A  L+  +   E + + +  +  P  +    ++D+ L  L +           +VAIER G  A+DG+YY  R   +  +V P++ L      +P  V + G+GDGGNE+GMGKV D +     I     IAC     + + A VSNWGGYA+ CAL  +                       C  + + +R          R  W+  L  S  +++++L+ +V  G R G T   +  VDG+P  +T S M+ +L + A+
Sbjct:  290 AEAARKIRTLETLIGIDPGERGILQL-QRQGELLRACLAMSHA-GSVLVTTGFPTHCGHQPPEENDGPPGALAIAAMLQALEKQ-VAIVTDQRAMDLNKKIIE-EAVQLGILEKPIPLLSYQRESDDSALMFLCENGDPGRPRFDHLVAIERAGM-AADGNYYNARKVNIKHLVDPIDELFLAAQTIP-GVTTTGVGDGGNELGMGKVKDAV--KKHIKNGDVIACDVEADFTVVAGVSNWGGYAMACALYVLRC---------------------CEIHERYLRRALGPPRTESRRLWLSAL-PSVTKEEKLLKTLVQLGVRSGKTASLEMEVDGLPFYDTHSLMIEKLLQEAQ 614          
BLAST of NO02G04240 vs. NCBI_GenBank
Match: XP_023783459.1 (D-glutamate cyclase, mitochondrial isoform X2 [Cyanistes caeruleus])

HSP 1 Score: 140.6 bits (353), Expect = 9.300e-30
Identity = 113/355 (31.83%), Postives = 168/355 (47.32%), Query Frame = 0
Query:    2 SSTAAVIATLEAAVQRDEGKRGLTDLVLPAGELETAASALYHAPGPIAILTGFPCMLDHIPPTETDGPPGALAIIQACLALNKPCILLVEESNAAVLSAGVAAVEDMSVNLRVEVFPPKTKWGPTEDARLCQLAQ-------EITFVVAIERTGPGASDGHYYTMRGKQMDEVVAPLERLL---DLVPESVHSIGIGDGGNEVGMGKVLDRILASTIISKARQIACCTSTSWLLAASVSNWGGYALCCALAAVAAEVEATYTTAKRGKDGDKIKTDCMSNAKGMRNPANDGMGRRRGKWVERLVVSEAQDQRVLEAIVAAGARDGITGERKEWVDGMP-KETSSAMLRELREIAR 346
            +  A  I TLE  +  D G+RG+  L    GEL  A  A+ HA G + + TGFP    H PP E DGPPGALAI     AL K  + +V +  A  L+  +   E + + +  +  P  +    ++D+ L  L +           +VAIER G  A+DG+YY  R   +  +V P++ L      +P  V + G+GDGGNE+GMGKV D +     I     IAC     + + A VSNWGGYA+ CAL  +                       C  + + +R          R  W+  L  S  +++++L+ +V  G R G T   +  VDG+P  +T S M+ +L + A+
Sbjct:  302 AEAARKIRTLETLIGIDPGERGILQL-QRQGELLRACLAMSHA-GSVLVTTGFPTHCGHQPPEENDGPPGALAIAAMLQALEKQ-VAIVTDQRAMDLNKKIIE-EAVQLGILEKPIPLLSYQRESDDSALMFLCENGDPGRPRFDHLVAIERAGM-AADGNYYNARKVNIKHLVDPIDELFLAAQTIP-GVTTTGVGDGGNELGMGKVKDAV--KKHIKNGDVIACDVEADFTVVAGVSNWGGYAMACALYVLRC---------------------CEIHERYLRRALGPPRTESRRLWLSAL-PSVTKEEKLLKTLVQLGVRSGKTASLEMEVDGLPFYDTHSLMIEKLLQEAQ 626          
BLAST of NO02G04240 vs. NCBI_GenBank
Match: XP_023783458.1 (D-glutamate cyclase, mitochondrial isoform X1 [Cyanistes caeruleus])

HSP 1 Score: 140.6 bits (353), Expect = 9.300e-30
Identity = 113/355 (31.83%), Postives = 168/355 (47.32%), Query Frame = 0
Query:    2 SSTAAVIATLEAAVQRDEGKRGLTDLVLPAGELETAASALYHAPGPIAILTGFPCMLDHIPPTETDGPPGALAIIQACLALNKPCILLVEESNAAVLSAGVAAVEDMSVNLRVEVFPPKTKWGPTEDARLCQLAQ-------EITFVVAIERTGPGASDGHYYTMRGKQMDEVVAPLERLL---DLVPESVHSIGIGDGGNEVGMGKVLDRILASTIISKARQIACCTSTSWLLAASVSNWGGYALCCALAAVAAEVEATYTTAKRGKDGDKIKTDCMSNAKGMRNPANDGMGRRRGKWVERLVVSEAQDQRVLEAIVAAGARDGITGERKEWVDGMP-KETSSAMLRELREIAR 346
            +  A  I TLE  +  D G+RG+  L    GEL  A  A+ HA G + + TGFP    H PP E DGPPGALAI     AL K  + +V +  A  L+  +   E + + +  +  P  +    ++D+ L  L +           +VAIER G  A+DG+YY  R   +  +V P++ L      +P  V + G+GDGGNE+GMGKV D +     I     IAC     + + A VSNWGGYA+ CAL  +                       C  + + +R          R  W+  L  S  +++++L+ +V  G R G T   +  VDG+P  +T S M+ +L + A+
Sbjct:  307 AEAARKIRTLETLIGIDPGERGILQL-QRQGELLRACLAMSHA-GSVLVTTGFPTHCGHQPPEENDGPPGALAIAAMLQALEKQ-VAIVTDQRAMDLNKKIIE-EAVQLGILEKPIPLLSYQRESDDSALMFLCENGDPGRPRFDHLVAIERAGM-AADGNYYNARKVNIKHLVDPIDELFLAAQTIP-GVTTTGVGDGGNELGMGKVKDAV--KKHIKNGDVIACDVEADFTVVAGVSNWGGYAMACALYVLRC---------------------CEIHERYLRRALGPPRTESRRLWLSAL-PSVTKEEKLLKTLVQLGVRSGKTASLEMEVDGLPFYDTHSLMIEKLLQEAQ 631          
The following BLAST results are available for this feature:
BLAST of NO02G04240 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_019629429.16.900e-3333.14PREDICTED: UPF0317 protein C14orf159 homolog, mito... [more]
XP_002609465.12.600e-3231.83hypothetical protein BRAFLDRAFT_226600 [Branchiost... [more]
CEM04142.15.800e-3235.05unnamed protein product [Vitrella brassicaformis C... [more]
XP_007908317.17.600e-3233.05PREDICTED: UPF0317 protein C14orf159 homolog, mito... [more]
OQR89919.11.300e-3133.53hypothetical protein ACHHYP_05944 [Achlya hypogyna... [more]
OQR91013.11.400e-3033.53inositol-3,4-bisphosphate 4-phosphatase [Thraustot... [more]
XP_016061189.19.300e-3033.24PREDICTED: UPF0317 protein C14orf159 homolog, mito... [more]
XP_023783460.19.300e-3031.83D-glutamate cyclase, mitochondrial isoform X3 [Cya... [more]
XP_023783459.19.300e-3031.83D-glutamate cyclase, mitochondrial isoform X2 [Cya... [more]
XP_023783458.19.300e-3031.83D-glutamate cyclase, mitochondrial isoform X1 [Cya... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007085NSK007085Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G04240.1NO02G04240.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|575028gene_1013Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100003g53gene413Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G04240.1NO02G04240.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G04240 ID=NO02G04240|Name=NO02G04240|organism=Nannochloropsis oceanica|type=gene|length=1313bp
ACAGGCTTCGCACACAGCACACCCCGTAATCAAGGTCATTGATGAGCCGT
GGAAGCCATGGCTTTGATCATGGAACTTGCAGTCGTTAAGTAATTGTCTT
CCCGGTACACTGTCTTTCAGCCACAGCCACAGCCACAGCCATAGCACACA
AGTATGCGAGCATGTCCAGCACTGCGGCAGTAATTGCTACCCTGGAAGCC
GCCGTGCAGCGGGACGAGGGTAAACGAGGCTTGACTGACCTGGTGCTGCC
AGCGGGCGAGCTGGAGACGGCTGCCAGTGCTCTCTACCATGCCCCAGGCC
CCATCGCCATCCTCACCGGATTCCCCTGCATGCTCGACCACATCCCGCCC
ACCGAGACAGATGGCCCACCAGGCGCATTAGCCATTATCCAAGCTTGTCT
TGCGCTCAACAAACCTTGCATTCTATTGGTTGAGGAAAGCAATGCTGCCG
TGCTTAGTGCTGGCGTGGCCGCTGTCGAGGACATGTCAGTCAATCTGCGC
GTAGAGGTCTTTCCACCCAAAACAAAGTGGGGACCGACTGAAGACGCCCG
CCTTTGCCAGCTTGCTCAAGAAATTACTTTCGTGGTGGCCATCGAGCGGA
CGGGCCCGGGAGCTAGCGATGGGCATTACTATACGATGCGCGGAAAACAA
ATGGATGAGGTGGTGGCTCCCCTGGAACGATTGCTGGATTTAGTGCCGGA
GTCTGTGCACAGCATCGGCATCGGAGACGGAGGAAATGAAGTAGGGATGG
GCAAAGTTTTGGACCGAATATTGGCTTCAACAATCATATCAAAGGCGAGG
CAGATTGCGTGTTGCACAAGCACGTCGTGGTTGCTGGCGGCCTCGGTCAG
TAATTGGGGTGGATACGCTTTATGCTGCGCACTGGCAGCAGTGGCAGCAG
AAGTAGAAGCAACATATACAACTGCCAAGAGGGGGAAAGATGGAGATAAG
ATCAAGACTGACTGCATGTCTAACGCTAAAGGCATGAGAAACCCGGCAAA
TGATGGGATGGGCAGAAGAAGGGGGAAATGGGTAGAGCGGTTGGTAGTAT
CCGAGGCACAAGATCAAAGAGTGCTTGAGGCGATTGTGGCAGCAGGGGCT
AGGGATGGAATCACCGGAGAGAGAAAAGAATGGGTGGATGGGATGCCGAA
AGAGACCTCTTCGGCTATGCTGCGAGAGCTGCGGGAGATTGCGAGGAGCA
ATTAGATGTAAATGTACAATTGGTTGTGGATGAAGATTGACGCTCTCCTT
TTCAGAATCAACATAACTTCAGAGCAGCTGCTGTGCCCTTATTCCGATAA
AGAAATCTGTTTC
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protein sequence of NO02G04240.1

>NO02G04240.1-protein ID=NO02G04240.1-protein|Name=NO02G04240.1|organism=Nannochloropsis oceanica|type=polypeptide|length=348bp
MSSTAAVIATLEAAVQRDEGKRGLTDLVLPAGELETAASALYHAPGPIAI
LTGFPCMLDHIPPTETDGPPGALAIIQACLALNKPCILLVEESNAAVLSA
GVAAVEDMSVNLRVEVFPPKTKWGPTEDARLCQLAQEITFVVAIERTGPG
ASDGHYYTMRGKQMDEVVAPLERLLDLVPESVHSIGIGDGGNEVGMGKVL
DRILASTIISKARQIACCTSTSWLLAASVSNWGGYALCCALAAVAAEVEA
TYTTAKRGKDGDKIKTDCMSNAKGMRNPANDGMGRRRGKWVERLVVSEAQ
DQRVLEAIVAAGARDGITGERKEWVDGMPKETSSAMLRELREIARSN*
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Synonyms
Publications