NO02G04060, NO02G04060 (gene) Nannochloropsis oceanica

Overview
NameNO02G04060
Unique NameNO02G04060
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2515
Alignment locationchr2:1105886..1108400 -

Link to JBrowse

Properties
Property NameValue
DescriptionNadh dehydrogenase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:1105886..1108400 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0005488binding
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf
IPR002023NuoE-like
Homology
[Close]
BLAST of NO02G04060 vs. NCBI_GenBank
Match: GAY01090.1 (NADH dehydrogenase flavoprotein 2, mitochondrial precursor [Pythium insidiosum])

HSP 1 Score: 350.9 bits (899), Expect = 5.400e-93
Identity = 174/259 (67.18%), Postives = 211/259 (81.47%), Query Frame = 0 
Query:  163 AAAAATG---FHSSPAVLTNYHPTAQHKDEAGNSVKDAWDFTDENYKRVNMILARYPANYKAAGIIPMLDLAQRQNGGWLPVAAMDKVASIVGVVPMRVYEVATFYTMFNREKVGKWFIQLCGTTPCMVNGAEEIRATIEKHLGIKEGETSKDGLFTLREVECLGSCANAPMIQLNDDYYECLTPATTIELLEACKKGNPPKMGRWGSLPMNGQVSCEGPHGKTSLK-EPAPTPGFMMRTD--LDGKVDPATVKKEMHY 416
            AA++ TG    H+S AVL+  +   QH+D   N++  A+DFT +NY+RV+ IL RYP NYKA+ IIP+LDLAQRQ+GGWLP+AAM+KVA IV V P++VYEVATFYTMFNREKVGK+FIQLCGTTPCM+ G+EEI+ TIE++LGIKEGET+ DG FTLREVECLG+CANAPM+Q+NDD+YE L+P TT+ELLEACK+  PP M +WGSLPMNGQ+SCEGP GKTSLK E  P PGF MR D  L  KVDP  +K+EM Y
Sbjct:   11 AASSQTGARSLHASRAVLSGGN-FPQHRDTDDNNIDTAFDFTPDNYERVHAILDRYPENYKASAIIPLLDLAQRQHGGWLPLAAMNKVARIVDVKPIQVYEVATFYTMFNREKVGKYFIQLCGTTPCMICGSEEIKKTIEENLGIKEGETTADGKFTLREVECLGACANAPMVQINDDFYENLSPKTTVELLEACKRDAPPPMNKWGSLPMNGQLSCEGPMGKTSLKWEKHPPPGFRMRPDSELQPKVDPKKIKEEMLY 268
[Close]
BLAST of NO02G04060 vs. NCBI_GenBank
Match: EJK48425.1 (hypothetical protein THAOC_32775 [Thalassiosira oceanica])

HSP 1 Score: 349.4 bits (895), Expect = 1.600e-92
Identity = 174/267 (65.17%), Postives = 205/267 (76.78%), Query Frame = 0 
Query:  149 SAAAGGLLEKSTRPAAAAATGFHSSPAVLTNYHPTAQHKDEAGNSVKDAWDFTDENYKRVNMILARYPANYKAAGIIPMLDLAQRQNGGWLPVAAMDKVASIVGVVPMRVYEVATFYTMFNREKVGKWFIQLCGTTPCMVNGAEEIRATIEKHLGIKEGETSKDGLFTLREVECLGSCANAPMIQLNDDYYECLTPATTIELLEACKKGNPPKMGRWGSLPMNGQVSCEGPHGKTSLKEPAPTPGFMMRTDLDGKVDPATVKKEMHY 416
            +AA  G L     P AAAAT    + ++ +     + H +   N+V+  +DFT+ENYK VN IL++YPANYK +GIIP+LDLAQRQ+GGWLPVAAMDKVASIV   P RVYEVA+FYTMFNR KVGK+FIQLCGTTPCM+ G+E+I+ TIE HLGIK GET++DG+FTL EVECLG+CANAPMIQ+NDDYYECLTP TTIELL+ACK+G PP MG+WGSLPMNGQVSCEGP GKTSL      P        DG VDPA+VK  M Y
Sbjct:   17 AAACMGRLLSRRLPTAAAATAGRQTRSMGS---AQSFHINTPDNTVETYFDFTEENYKLVNKILSKYPANYKQSGIIPLLDLAQRQHGGWLPVAAMDKVASIVEAAPSRVYEVASFYTMFNRTKVGKYFIQLCGTTPCMICGSEDIKKTIENHLGIKNGETTEDGMFTLLEVECLGACANAPMIQMNDDYYECLTPKTTIELLDACKRGEPPTMGKWGSLPMNGQVSCEGPLGKTSLWTVPDPPKVDPDRFKDGSVDPASVKVHMSY 280
[Close]
BLAST of NO02G04060 vs. NCBI_GenBank
Match: XP_024578740.1 (nadh dehydrogenase [Plasmopara halstedii] >CEG42371.1 nadh dehydrogenase [Plasmopara halstedii])

HSP 1 Score: 347.4 bits (890), Expect = 6.000e-92
Identity = 170/252 (67.46%), Postives = 201/252 (79.76%), Query Frame = 0 
Query:  167 ATGFHSSPAVLTNYHPTAQHKDEAGNSVKDAWDFTDENYKRVNMILARYPANYKAAGIIPMLDLAQRQNGGWLPVAAMDKVASIVGVVPMRVYEVATFYTMFNREKVGKWFIQLCGTTPCMVNGAEEIRATIEKHLGIKEGETSKDGLFTLREVECLGSCANAPMIQLNDDYYECLTPATTIELLEACKKGNPPKMGRWGSLPMNGQVSCEGPHGKTSLK-EPAPTPGFMMR--TDLDGKVDPATVKKEMHY 416
            A  FHSS AV +++    QH+D   N+    +DFT ENY+RV+ IL RYP NYK++ IIP+LDLAQRQ+GGWLP+AAM+KVA IV V P++VYEVATFYTMFNREKVGK+FIQLCGTTPCM+ G+EEI+ TIE HLGIKEGET+KDG FTLREVECLG+CANAPM+Q+NDD+YE LTP TT ELL+ACKK   P M +WGSLPMNGQ+SCEGP GKTSLK E  P PGF MR   DL  K++P  +K  M Y
Sbjct:   23 AADFHSSNAVQSSF---VQHRDTEENNADTPFDFTPENYERVHAILDRYPENYKSSAIIPLLDLAQRQHGGWLPLAAMNKVARIVDVKPIQVYEVATFYTMFNREKVGKYFIQLCGTTPCMICGSEEIKKTIETHLGIKEGETTKDGKFTLREVECLGACANAPMVQINDDFYENLTPETTRELLDACKKDATPPMSKWGSLPMNGQLSCEGPQGKTSLKWEKPPGPGFRMRPDEDLKPKINPKDIKDAMLY 271
[Close]
BLAST of NO02G04060 vs. NCBI_GenBank
Match: CBN75203.1 (NUOE homolog, NADH dehydrogenase (ubiquinone) subunit [Ectocarpus siliculosus])

HSP 1 Score: 345.1 bits (884), Expect = 3.000e-91
Identity = 172/276 (62.32%), Postives = 200/276 (72.46%), Query Frame = 0 
Query:  143 LRRLGRSAAAGGLLEKSTRPAAA---AATGFHSSPAVLTNYHPTAQHKDEAGNSVKDAWDFTDENYKRVNMILARYPANYKAAGIIPMLDLAQRQNGGWLPVAAMDKVASIVGVVPMRVYEVATFYTMFNREKVGKWFIQLCGTTPCMVNGAEEIRATIEKHLGIKEGETSKDGLFTLREVECLGSCANAPMIQLNDDYYECLTPATTIELLEACKKGNPPKMGRWGSLPMNGQVSCEGPHGKTSLKEPAPTPGFMMRTDLDGKVDPATVKKEMHY 416
            LR +G +  A       T  A A   A    H + +     H   QHKD   N+    +DFTDENY RV  I+A+YPANY+ A IIP+LDLAQRQ+GGWLP+AAM+KVA IVG   M+VYEVATFYTMFNREK GK FIQLCGTTPCMV G+E+I+ TI   LGIK G T+ DG+FTL EVECLG+CANAPM+Q+NDDY+ECLTP T  ELLE CK G  P+MGRWGSLP+NGQVSCEGPHGKTSL+     PGFMMR DL+ KVDP +VK  M Y
Sbjct:    3 LRTIGAATRALASRRPCTVRAPATVSAERNVHRTVSARDEVHQLGQHKDTPDNNETTFFDFTDENYARVEKIMAKYPANYRQASIIPLLDLAQRQHGGWLPLAAMEKVAKIVGQHEMKVYEVATFYTMFNREKRGKHFIQLCGTTPCMVCGSEDIKKTIMDELGIKNGGTTADGMFTLLEVECLGACANAPMVQINDDYFECLTPETMKELLEKCKNGETPEMGRWGSLPLNGQVSCEGPHGKTSLEGTPTGPGFMMRKDLEQKVDPKSVKDHMCY 278
[Close]
BLAST of NO02G04060 vs. NCBI_GenBank
Match: GAX96088.1 (NADH dehydrogenase flavoprotein 2, mitochondrial precursor [Pythium insidiosum])

HSP 1 Score: 345.1 bits (884), Expect = 3.000e-91
Identity = 172/259 (66.41%), Postives = 209/259 (80.69%), Query Frame = 0 
Query:  163 AAAAATG---FHSSPAVLTNYHPTAQHKDEAGNSVKDAWDFTDENYKRVNMILARYPANYKAAGIIPMLDLAQRQNGGWLPVAAMDKVASIVGVVPMRVYEVATFYTMFNREKVGKWFIQLCGTTPCMVNGAEEIRATIEKHLGIKEGETSKDGLFTLREVECLGSCANAPMIQLNDDYYECLTPATTIELLEACKKGNPPKMGRWGSLPMNGQVSCEGPHGKTSLK-EPAPTPGFMMRTD--LDGKVDPATVKKEMHY 416
            AA++ TG    H+S AVL+  +   QH+    N++  A+DFT +NY+RV+ IL R P NYKA+ IIP+LDLAQRQ+GGWLP+AAM+KVA IV V P++VYEVATFYTMFNREKVGK+FIQLCGTTPCM+ G+EEI+ TIE++LGIKEGET+ DG FTLREVECLG+CANAPM+Q+NDD+YE L+P TT+ELLEACK+  PP M +WGSLPMNGQ+SCEGP GKTSLK E  P PGF MR D  L  KVDP  +K+EM Y
Sbjct:   11 AASSQTGARSLHASRAVLSGGN-FPQHRXTDDNNIDTAFDFTPDNYERVHAILDRXPENYKASAIIPLLDLAQRQHGGWLPLAAMNKVARIVDVKPIQVYEVATFYTMFNREKVGKYFIQLCGTTPCMICGSEEIKKTIEENLGIKEGETTADGKFTLREVECLGACANAPMVQINDDFYENLSPKTTVELLEACKRDAPPPMNKWGSLPMNGQLSCEGPMGKTSLKWEKHPPPGFRMRPDSELQPKVDPKKIKEEMLY 268
[Close]
BLAST of NO02G04060 vs. NCBI_GenBank
Match: XP_009825434.1 (hypothetical protein H257_03156 [Aphanomyces astaci] >ETV85416.1 hypothetical protein H257_03156 [Aphanomyces astaci])

HSP 1 Score: 344.0 bits (881), Expect = 6.600e-91
Identity = 170/264 (64.39%), Postives = 206/264 (78.03%), Query Frame = 0 
Query:  155 LLEKSTRPAAAAATGFHSSPAVLTNYHPTAQHKDEAGNSVKDAWDFTDENYKRVNMILARYPANYKAAGIIPMLDLAQRQNGGWLPVAAMDKVASIVGVVPMRVYEVATFYTMFNREKVGKWFIQLCGTTPCMVNGAEEIRATIEKHLGIKEGETSKDGLFTLREVECLGSCANAPMIQLNDDYYECLTPATTIELLEACKKGNPPKMGRWGSLPMNGQVSCEGPHGKTSLK-EPAPTPGFMMRTDLD--GKVDPATVKKEMHY 416
            L+  + R +AAAA G      V       +QH+D   N+ + ++DF++ NY +V+ IL+RYP NYKA+ IIP+LDLAQRQ+GGWLP+AAM+KVA IV V PM+VYEVATFYTMFNREKVGK+FIQLCGTTPCM+ G+EEI+  IE HLGIKEGET+ D LFTLREVECLG+C+NAPM+Q+NDD+YE LTP TT +LL+ACKK  PP M +WGSLPMNGQ+SCEGP GKTSLK +  P PGF MR D D   KVDP T+K EM Y
Sbjct:    5 LVNATWRRSAAAAAG-----PVRFMSAGISQHRDTPDNTSETSFDFSESNYVKVHAILSRYPENYKASAIIPLLDLAQRQHGGWLPLAAMNKVARIVDVKPMQVYEVATFYTMFNREKVGKYFIQLCGTTPCMICGSEEIKNVIEDHLGIKEGETTADDLFTLREVECLGACSNAPMVQINDDFYENLTPETTRQLLDACKKNQPPPMNKWGSLPMNGQLSCEGPQGKTSLKWDKHPAPGFRMRPDADLVPKVDPKTIKDEMLY 263
[Close]
BLAST of NO02G04060 vs. NCBI_GenBank
Match: OQS06772.1 (NADH dehydrogenase flavoprotein 2, mitochondrial precursor [Thraustotheca clavata])

HSP 1 Score: 343.6 bits (880), Expect = 8.700e-91
Identity = 160/244 (65.57%), Postives = 199/244 (81.56%), Query Frame = 0 
Query:  174 PAVLTNYHPTAQHKDEAGNSVKDAWDFTDENYKRVNMILARYPANYKAAGIIPMLDLAQRQNGGWLPVAAMDKVASIVGVVPMRVYEVATFYTMFNREKVGKWFIQLCGTTPCMVNGAEEIRATIEKHLGIKEGETSKDGLFTLREVECLGSCANAPMIQLNDDYYECLTPATTIELLEACKKGNPPKMGRWGSLPMNGQVSCEGPHGKTSLKEPAPTPGFMMR--TDLDGKVDPATVKKEMHY 416
            PA   ++   +QH+D   N+ + ++DFT ENY++V+ IL+RYP NYKA+ IIP+LDLAQRQ+GGWLP+AAM+KVA I  V P++VYEVATFYTMFNREKVGK+FIQLCGTTPCM+ G+EEI+ TIE HLGIKEGET+ D +FTLREVECLG+CANAPM+Q+NDD+YE LTP  T ELL+ACK+  PP M +WGSLPMNGQ+SCEGP GKT+LK   P  GF MR  +DL+ KVDP  +K++M Y
Sbjct:   15 PARSMSHGAISQHRDTPDNTKETSFDFTAENYEKVHAILSRYPENYKASAIIPLLDLAQRQHGGWLPLAAMNKVARITEVKPIQVYEVATFYTMFNREKVGKYFIQLCGTTPCMICGSEEIKKTIEDHLGIKEGETTNDNMFTLREVECLGACANAPMVQINDDFYENLTPQATRELLDACKRDQPPPMSKWGSLPMNGQLSCEGPQGKTTLKWEHPPAGFKMRPDSDLEPKVDPKKIKEDMLY 258
[Close]
BLAST of NO02G04060 vs. NCBI_GenBank
Match: XP_008605020.1 (NADH dehydrogenase (ubiquinone) flavoprotein 2 [Saprolegnia diclina VS20] >EQC41306.1 NADH dehydrogenase (ubiquinone) flavoprotein 2 [Saprolegnia diclina VS20])

HSP 1 Score: 342.8 bits (878), Expect = 1.500e-90
Identity = 161/234 (68.80%), Postives = 193/234 (82.48%), Query Frame = 0 
Query:  184 AQHKDEAGNSVKDAWDFTDENYKRVNMILARYPANYKAAGIIPMLDLAQRQNGGWLPVAAMDKVASIVGVVPMRVYEVATFYTMFNREKVGKWFIQLCGTTPCMVNGAEEIRATIEKHLGIKEGETSKDGLFTLREVECLGSCANAPMIQLNDDYYECLTPATTIELLEACKKGNPPKMGRWGSLPMNGQVSCEGPHGKTSLKEPAPTPGFMMRTDLD--GKVDPATVKKEMHY 416
            +QH+D   N+ +  +DF++ENY +V+ IL+RYP NYKA+ IIP+LDLAQRQ+GGWLP+AAM+KVA I  V P++VYEVATFYTMFNREKVGK+FIQLCGTTPCM+ G+EEI+ TIE HLGIKEGET+ D LFTLREVECLG+CANAPM+Q+NDD+YE LTP TT ELL+ACK G  P M +WGSLPMNGQ+SCEGP GKT+LK   P  GF MR D D   KVDP T+K+EM Y
Sbjct:   25 SQHRDTPDNTKETPFDFSEENYVKVHAILSRYPENYKASAIIPLLDLAQRQHGGWLPLAAMNKVARITEVKPIQVYEVATFYTMFNREKVGKYFIQLCGTTPCMICGSEEIKKTIESHLGIKEGETTADDLFTLREVECLGACANAPMVQINDDFYENLTPQTTRELLDACKAGKAPVMNKWGSLPMNGQLSCEGPQGKTTLKWEHPPAGFKMRPDSDLVPKVDPKTIKEEMLY 258
[Close]
BLAST of NO02G04060 vs. NCBI_GenBank
Match: XP_002899864.1 (NADH dehydrogenase flavoprotein 2, mitochondrial precursor [Phytophthora infestans T30-4] >EEY60918.1 NADH dehydrogenase flavoprotein 2, mitochondrial precursor [Phytophthora infestans T30-4])

HSP 1 Score: 342.8 bits (878), Expect = 1.500e-90
Identity = 176/281 (62.63%), Postives = 211/281 (75.09%), Query Frame = 0 
Query:  138 MLPAVLRRLGRSAAAGGLLEKSTRPAAAAATGFHSSPAVLTNYHPTAQHKDEAGNSVKDAWDFTDENYKRVNMILARYPANYKAAGIIPMLDLAQRQNGGWLPVAAMDKVASIVGVVPMRVYEVATFYTMFNREKVGKWFIQLCGTTPCMVNGAEEIRATIEKHLGIKEGETSKDGLFTLREVECLGSCANAPMIQLNDDYYECLTPATTIELLEACKKGNPPKMGRWGSLPMNGQVSCEGPHGKTSLK-EPAPTPGFMMRTD--LDGKVDPATVKKEMHY 416
            ML   +R L  SAA     + S RP AAA  GFHSS    +++    QH+D   N+    +DFT ENY RV+ IL RYP NYK + IIP+LDLAQRQ+GGWLP+AAM+KVA IV   P++VYEVATFYTMFNREKVGK+FIQLCGTTPCM+ G+EEI+ TIE HLGIKEGET++DG FTLREVECLG+C+NAPM+Q+NDD+YE LT  TT ELL+ACK   PP M +WGSLPMNGQ+SCEGP GKT+LK +  P PGF MR D  L  KV+P  +K+ M Y
Sbjct:    1 MLSRSVRALRASAA-----QLSARPVAAA--GFHSSNIAGSSF---VQHRDTEDNNADTPFDFTPENYDRVHAILDRYPENYKTSAIIPLLDLAQRQHGGWLPLAAMNKVARIVDAKPIQVYEVATFYTMFNREKVGKYFIQLCGTTPCMICGSEEIKKTIENHLGIKEGETTEDGKFTLREVECLGACSNAPMVQINDDFYENLTAETTRELLDACKNDAPPLMNKWGSLPMNGQLSCEGPQGKTTLKWDKVPGPGFRMRPDDELKPKVNPKDIKEAMLY 271
[Close]
BLAST of NO02G04060 vs. NCBI_GenBank
Match: XP_012194612.1 (hypothetical protein SPRG_01020 [Saprolegnia parasitica CBS 223.65] >KDO34958.1 hypothetical protein SPRG_01020 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 342.8 bits (878), Expect = 1.500e-90
Identity = 161/234 (68.80%), Postives = 193/234 (82.48%), Query Frame = 0 
Query:  184 AQHKDEAGNSVKDAWDFTDENYKRVNMILARYPANYKAAGIIPMLDLAQRQNGGWLPVAAMDKVASIVGVVPMRVYEVATFYTMFNREKVGKWFIQLCGTTPCMVNGAEEIRATIEKHLGIKEGETSKDGLFTLREVECLGSCANAPMIQLNDDYYECLTPATTIELLEACKKGNPPKMGRWGSLPMNGQVSCEGPHGKTSLKEPAPTPGFMMRTDLD--GKVDPATVKKEMHY 416
            +QH+D   N+ +  +DF++ENY +V+ IL+RYP NYKA+ IIP+LDLAQRQ+GGWLP+AAM+KVA I  V P++VYEVATFYTMFNREKVGK+FIQLCGTTPCM+ G+EEI+ TIE HLGIKEGET+ D LFTLREVECLG+CANAPM+Q+NDD+YE LTP TT ELL+ACK G  P M +WGSLPMNGQ+SCEGP GKT+LK   P  GF MR D D   KVDP T+K+EM Y
Sbjct:   25 SQHRDTPDNTKETPFDFSEENYVKVHAILSRYPENYKASAIIPLLDLAQRQHGGWLPLAAMNKVARITEVKPIQVYEVATFYTMFNREKVGKYFIQLCGTTPCMICGSEEIKKTIESHLGIKEGETTADELFTLREVECLGACANAPMVQINDDFYENLTPQTTRELLDACKAGKAPAMNKWGSLPMNGQLSCEGPQGKTTLKWEHPPAGFKMRPDSDLVPKVDPKTIKEEMLY 258
The following BLAST results are available for this feature:
BLAST of NO02G04060 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
GAY01090.15.400e-9367.18NADH dehydrogenase flavoprotein 2, mitochondrial p... [more]
EJK48425.11.600e-9265.17hypothetical protein THAOC_32775 [Thalassiosira oc... [more]
XP_024578740.16.000e-9267.46nadh dehydrogenase [Plasmopara halstedii] >CEG4237... [more]
CBN75203.13.000e-9162.32NUOE homolog, NADH dehydrogenase (ubiquinone) subu... [more]
GAX96088.13.000e-9166.41NADH dehydrogenase flavoprotein 2, mitochondrial p... [more]
XP_009825434.16.600e-9164.39hypothetical protein H257_03156 [Aphanomyces astac... [more]
OQS06772.18.700e-9165.57NADH dehydrogenase flavoprotein 2, mitochondrial p... [more]
XP_008605020.11.500e-9068.80NADH dehydrogenase (ubiquinone) flavoprotein 2 [Sa... [more]
XP_002899864.11.500e-9062.63NADH dehydrogenase flavoprotein 2, mitochondrial p... [more]
XP_012194612.11.500e-9068.80hypothetical protein SPRG_01020 [Saprolegnia paras... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007062NSK007062Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G04060.1NO02G04060.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|574952gene_997Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100003g74gene395Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G04060.1NO02G04060.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G04060 ID=NO02G04060|Name=NO02G04060|organism=Nannochloropsis oceanica|type=gene|length=2515bp
AGCGCGTGTCTATTTTCACCTGTTTGGGGTATTACAATGAGCAAAGTTAA
AAGAGTTGCCTTTGTTACGCGAATCGAGTTTGCACGCTTGTACAGCAGGG
GATGGAATGGTATTCGGGCTAAAAGACTTTGCCGAAAAATGGAATGCTTG
CTTTATCGCGTGGCGTTGTACTTACTACACCCGTGTGGCACAGGATGTGT
GCGTCGCCCTAGCTCGTATTGATGTGTCACTCCACCCTACTGACCGCATA
AGCAGCACACCCACAGACTCTCCCACAGACCCACGACGTGGTGTTTCGTG
TATCGATGTCGCTGCTATCGTAGCTCGTCGCGTCGTACTTGATCGTGGGC
AGCGTCTTCGTTCAGACCGACATCATCATCCTGCTGATGCATCCAACTCG
TACCATCATACCTCACACACACTCTACATGGACAGACAGGGCAAGGATCT
TCTCCTATTTCCCTCTCCTTTCCTCCTTGCGTGGTTGTCGTTTTCGTCGG
GCCTGACGCTAGTGATCATGCTGCCCGCGGTGCTGCGTCGATTGGGGCGC
TCGGCGGCTGCTGGTGGCCTCCTCGAAAAGgtacgtccccttcttttaac
tcacgcgtcatctagtgcaacgcttctgcagggtgacggaatgattctcg
tatcagtttactctgctctcgcccttctgtggcttgtcgtcgtccgcggt
ctgacctacacacatccggccctttctctaagAGCACTCGACCAGCTGCA
GCCGCCGCCACTGGCTTTCACAGCAGCCCTGCCGTGCTGACTAACTACCA
TCCTACGGCGCAGCACAAGGACGAGGCTGGGAACAGTGTGAAGGACGCCT
GGGATTTTACTGACGgtaagcaactcttttcattgcgctgacggtgttat
agtgtagtgggaatcatcgcctcctcactccctcctccccccctcccgat
ttccctactttacagAGAATTACAAGCGCGTCAACATGATTTTAGCGCGC
TACCCGGCCAATTACAAAGCGGCCGGTATCATCCCCATGCTGGACTTGGC
GCAACGGCAAAACGGCGGTTGGCTTCCGGTGGCGGCCATGGATAAAGTAG
CTTCCATTGTCGGCGTGGTGCCGATGCGTGTATATGAGGTGGCGACATTC
TACACCATGTTCAACCGgtatgtgctattttaaatttgtaatcaagacaa
ttaatatgcatgctgtgcgcacgtgcatgtatgcttgtatgtgctttttt
gattatctctctgggctctggtggtgtgaatatggctattgtggtaactg
aagcgggaaggggggtggggatgcatgtgtgtacgaggttgcggtgcttc
gtgccatgtgcaaccggtaggtaagacacggagcggtggtgtcgaagagg
atatgtcagaggtgtgcatatttgtacgcatgcatccacacattcggtga
gaacatatcggcatcgctcacttatcatccctcctttcctccctccctcc
ctccctccaatctccccccagTGAGAAGGTTGGTAAATGGTTTATTCAGC
TGTGTGGTACCACGCCTTGCATGGTGAATGGAGCCGAGGAGATCCGCGCG
ACGATTGAGAAACACCTCGGCATCAAGGAGGGGGAGACGAGCAAAGATGG
CTTGTTCACTTTGAGGGAAGTAGAGTGCCTGGGGTCATGCGCTAATGCGC
CCATGATTCAGTTGAATGATGACTACTATgtgagtaatatttttctacct
cttcgtcctatttctttccctcccgctccctccctcccttcctgagcgtt
caaggacatctagactcgtcattccactttagggcggggggaggggaagg
aagtgagggagccagatttctcgcttttcccctatgacaaaagccttttt
aaacaagaaactattgcgtttatccgctcattactcacttactcaccccc
actcactcacacctatttagGAATGCCTCACCCCCGCCACGACCATCGAG
CTACTCGAGGCGTGCAAGAAGGGGAACCCACCCAAGATGGGTCGCTGGGG
CTCGTTGCCGATGAATGGGCAAGTCTCCTGTGAGGGGCCACATGGCAAGA
CAAGTCTGAAGGAACCTGCACCCACGCCGGGTTTTATGATGCGCACGGAC
CTGGATGGGAAGGTCGACCCGGCGACGGTGAAGAAGGAGATGCATTATTA
GATTGAGAGGGGGAGTGAAAATGAACAGGGTTCATTCTCCGCGTACATGA
AAATTTATGCTACATTTTGGTGTGGTGGGCTGTGTGTTCATGGGCGTGAT
GGATGGTAGTTTGGACGTTGTCCTTGTACGAGAAGTGAGGGACATGCGCG
TATGTCGGCCCAAGCTATGGCGAGCGGGGGGGGAAGGGATGGGGAGGGAG
AGATAGGACTGAGATAAAAGATGGTTAACAGAGTGAAGTAGAAATATTAC
AAAGATGATGAGACTTCAGTGTCGTATTGGTTCTTGATGACTGGCAATTT
TACTGTCTTCTCTGT
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protein sequence of NO02G04060.1

>NO02G04060.1-protein ID=NO02G04060.1-protein|Name=NO02G04060.1|organism=Nannochloropsis oceanica|type=polypeptide|length=416bp
MVFGLKDFAEKWNACFIAWRCTYYTRVAQDVCVALARIDVSLHPTDRISS
TPTDSPTDPRRGVSCIDVAAIVARRVVLDRGQRLRSDRHHHPADASNSYH
HTSHTLYMDRQGKDLLLFPSPFLLAWLSFSSGLTLVIMLPAVLRRLGRSA
AAGGLLEKSTRPAAAAATGFHSSPAVLTNYHPTAQHKDEAGNSVKDAWDF
TDENYKRVNMILARYPANYKAAGIIPMLDLAQRQNGGWLPVAAMDKVASI
VGVVPMRVYEVATFYTMFNREKVGKWFIQLCGTTPCMVNGAEEIRATIEK
HLGIKEGETSKDGLFTLREVECLGSCANAPMIQLNDDYYECLTPATTIEL
LEACKKGNPPKMGRWGSLPMNGQVSCEGPHGKTSLKEPAPTPGFMMRTDL
DGKVDPATVKKEMHY*
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Synonyms
Publications