NO02G04060, NO02G04060 (gene) Nannochloropsis oceanica

Overview
NameNO02G04060
Unique NameNO02G04060
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2515
Alignment locationchr2:1105886..1108400 -

Link to JBrowse

Properties
Property NameValue
DescriptionNadh dehydrogenase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:1105886..1108400 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0005488binding
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf
IPR002023NuoE-like
Homology
[Close]
BLAST of NO02G04060 vs. NCBI_GenBank
Match: EWM30264.1 (nadh dehydrogenase [Nannochloropsis gaditana])

HSP 1 Score: 491.9 bits (1265), Expect = 2.000e-135
Identity = 237/279 (84.95%), Postives = 249/279 (89.25%), Query Frame = 0 
Query:  138 MLPAVLRRLGRSAAAGGLLEKSTRPAAAAATGFHSSPA-VLTNYHPTAQHKDEAGNSVKDAWDFTDENYKRVNMILARYPANYKAAGIIPMLDLAQRQNGGWLPVAAMDKVASIVGVVPMRVYEVATFYTMFNREKVGKWFIQLCGTTPCMVNGAEEIRATIEKHLGIKEGETSKDGLFTLREVECLGSCANAPMIQLNDDYYECLTPATTIELLEACKKGNPPKMGRWGSLPMNGQVSCEGPHGKTSLKEPAPTPGFMMRTDLDGKVDPATVKKEMHY 416
            MLPAV  RL RS        K          GFHS  A ++TNYHPTAQHKDE GNSVKDAWDF++ENYKRV+MIL RYP NYKAAGIIP+LDLAQRQNGGWLPVAAMDKVASIVGVVPMRVYEVATFYTMFNREKVGK+FIQLCGTTPCMVNGAEEIRATIEKHLGIKEGETSKDGLFTLREVECLGSCANAPM+QLNDDYYECLTPA+TIELLEACKKGNPPKMGRWGSLPMNGQVSCEGPHGKT+LKEPAP PGFMMR DLDG VDPATVK++MHY
Sbjct:    1 MLPAVAGRLSRSILRVPAFNKGHALTRVTGAGFHSGRARLMTNYHPTAQHKDEPGNSVKDAWDFSEENYKRVDMILHRYPTNYKAAGIIPLLDLAQRQNGGWLPVAAMDKVASIVGVVPMRVYEVATFYTMFNREKVGKYFIQLCGTTPCMVNGAEEIRATIEKHLGIKEGETSKDGLFTLREVECLGSCANAPMVQLNDDYYECLTPASTIELLEACKKGNPPKMGRWGSLPMNGQVSCEGPHGKTTLKEPAPAPGFMMRKDLDGNVDPATVKRDMHY 279
[Close]
BLAST of NO02G04060 vs. NCBI_GenBank
Match: XP_009033508.1 (hypothetical protein AURANDRAFT_59800 [Aureococcus anophagefferens] >EGB12485.1 hypothetical protein AURANDRAFT_59800 [Aureococcus anophagefferens])

HSP 1 Score: 352.4 bits (903), Expect = 1.900e-93
Identity = 179/275 (65.09%), Postives = 206/275 (74.91%), Query Frame = 0 
Query:  143 LRRLGRSAAAGGLLEKSTRPAAAAATGFHSSPAV--LTNYHPTAQHKDEAGNSVKDAWDFTDENYKRVNMILARYPANYKAAGIIPMLDLAQRQNGGWLPVAAMDKVASIVGVVPMRVYEVATFYTMFNREKVGKWFIQLCGTTPCMVNGAEEIRATIEKHLGIKEGETSKDGLFTLREVECLGSCANAPMIQLNDDYYECLTPATTIELLEACKKGNPPKMGRWGSLPMNGQVSCEGPHGKTSLKEPAPTPGFMMRTDLDGKVDPATVKKEMHY 416
            LRRL R+ A         RP+  A  G    P V  L+N+HP AQH +   N+ +  +DF+ +N+ R   IL +YPANYK +GIIP+LDLAQRQ+GGWLP+AAMDKVA  VG  PMRVYEVATFYTMFNRE+VG +FIQLCGTTPCMV G+E I+ +IE HLGIKEGETSKDGLFTLREVECLG+CANAPMIQ+NDDYYECLTP + + LLEACKKG P  MGRWGSLPMNGQVSCEGP GKTSL   AP P  +      G VDPA+VK  M Y
Sbjct:    4 LRRLPRALA---------RPSGVARAG---GPGVRPLSNFHPLAQHVNTGDNTKETTFDFSPDNHLRAEHILGKYPANYKMSGIIPLLDLAQRQSGGWLPLAAMDKVAKYVGCAPMRVYEVATFYTMFNREQVGTYFIQLCGTTPCMVCGSEAIKKSIEDHLGIKEGETSKDGLFTLREVECLGACANAPMIQMNDDYYECLTPDSMVALLEACKKGEPHAMGRWGSLPMNGQVSCEGPAGKTSLAS-APGPQPVRAEGFAGDVDPASVKAHMGY 265
[Close]
BLAST of NO02G04060 vs. NCBI_GenBank
Match: XP_008907055.1 (hypothetical protein PPTG_13082 [Phytophthora parasitica INRA-310] >ETI44233.1 hypothetical protein F443_11080 [Phytophthora parasitica P1569] >ETK84211.1 hypothetical protein L915_10802 [Phytophthora parasitica] >ETL37681.1 hypothetical protein L916_10693 [Phytophthora parasitica] >ETL90835.1 hypothetical protein L917_10592 [Phytophthora parasitica] >ETN07770.1 hypothetical protein PPTG_13082 [Phytophthora parasitica INRA-310] >ETP14057.1 hypothetical protein F441_10993 [Phytophthora parasitica CJ01A1] >KUF86067.1 NADH dehydrogenase flavoprotein 2 [Phytophthora nicotianae] >KUF93269.1 endoplasmic reticulum-Golgi intermediate compartment protein 3 [Phytophthora nicotianae])

HSP 1 Score: 352.4 bits (903), Expect = 1.900e-93
Identity = 180/281 (64.06%), Postives = 215/281 (76.51%), Query Frame = 0 
Query:  138 MLPAVLRRLGRSAAAGGLLEKSTRPAAAAATGFHSSPAVLTNYHPTAQHKDEAGNSVKDAWDFTDENYKRVNMILARYPANYKAAGIIPMLDLAQRQNGGWLPVAAMDKVASIVGVVPMRVYEVATFYTMFNREKVGKWFIQLCGTTPCMVNGAEEIRATIEKHLGIKEGETSKDGLFTLREVECLGSCANAPMIQLNDDYYECLTPATTIELLEACKKGNPPKMGRWGSLPMNGQVSCEGPHGKTSLK-EPAPTPGFMMRTD--LDGKVDPATVKKEMHY 416
            ML   +R L  SAA     + S RP AAA  GFHSS  V +++    QH+D   N+    +DFT ENY+RV+ IL RYP NYK + IIP+LDLAQRQ+GGWLP+AAM+KVA IV   P++VYEVATFYTMFNREKVGK+FIQLCGTTPCM+ G+EEI+ TIE HLGIKEGET++DG FTLREVECLG+C+NAPM+Q+NDD+YE LTP TT ELL+ACKK  PP M +WGSLPMNGQ+SCEGP GKT+LK +  P PGF MR D  L  KVDP  +K+ M Y
Sbjct:    1 MLSRSVRALRASAA-----QLSARPVAAA--GFHSSNTVGSSF---VQHRDTEDNNADTPFDFTPENYERVHAILDRYPENYKTSAIIPLLDLAQRQHGGWLPLAAMNKVARIVDAKPIQVYEVATFYTMFNREKVGKYFIQLCGTTPCMICGSEEIKKTIENHLGIKEGETTEDGKFTLREVECLGACSNAPMVQINDDFYENLTPETTRELLDACKKDVPPPMNKWGSLPMNGQLSCEGPQGKTTLKWDKVPGPGFRMRPDDELKPKVDPKDIKEAMLY 271
[Close]
BLAST of NO02G04060 vs. NCBI_GenBank
Match: CCI43451.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 352.4 bits (903), Expect = 1.900e-93
Identity = 172/252 (68.25%), Postives = 205/252 (81.35%), Query Frame = 0 
Query:  170 FHS---SPAVLTNYHPTAQHKDEAGNSVKDAWDFTDENYKRVNMILARYPANYKAAGIIPMLDLAQRQNGGWLPVAAMDKVASIVGVVPMRVYEVATFYTMFNREKVGKWFIQLCGTTPCMVNGAEEIRATIEKHLGIKEGETSKDGLFTLREVECLGSCANAPMIQLNDDYYECLTPATTIELLEACKKGNPPKMGRWGSLPMNGQVSCEGPHGKTSLK-EPAPTPGFMMRTD--LDGKVDPATVKKEMHY 416
            FH+   SPA+       AQH+D   N+ + ++DFT ENY RV+ IL RYP N+KA+ IIP+LDLAQRQ+GGWLP+AAM+KVA IV V P++VYEVATFYTMFNREKVGK+FIQLCGTTPCM+ G+EEI+ TIE+HLGIKEGET+ DG+FTLREVECLG+CANAPM+Q+NDD+YE LTP TT ELLEACK+G PPKM +WGSLPMNGQ+SCEGP GKTSL  +  P PGF MR D  L  KVDP  +K+EM Y
Sbjct:   22 FHAGSISPAIF------AQHRDTPDNTNESSFDFTTENYIRVHAILDRYPENFKASAIIPLLDLAQRQHGGWLPLAAMNKVARIVDVKPIQVYEVATFYTMFNREKVGKFFIQLCGTTPCMICGSEEIKRTIEEHLGIKEGETTSDGMFTLREVECLGACANAPMVQINDDFYENLTPETTRELLEACKEGQPPKMSKWGSLPMNGQLSCEGPQGKTSLLWDKHPPPGFRMRPDSELQPKVDPKKIKEEMLY 267
[Close]
BLAST of NO02G04060 vs. NCBI_GenBank
Match: CCA19114.1 (NADH dehydrogenase flavoprotein 2 putative [Albugo laibachii Nc14])

HSP 1 Score: 352.1 bits (902), Expect = 2.400e-93
Identity = 170/247 (68.83%), Postives = 203/247 (82.19%), Query Frame = 0 
Query:  172 SSPAVLTNYHPTAQHKDEAGNSVKDAWDFTDENYKRVNMILARYPANYKAAGIIPMLDLAQRQNGGWLPVAAMDKVASIVGVVPMRVYEVATFYTMFNREKVGKWFIQLCGTTPCMVNGAEEIRATIEKHLGIKEGETSKDGLFTLREVECLGSCANAPMIQLNDDYYECLTPATTIELLEACKKGNPPKMGRWGSLPMNGQVSCEGPHGKTSLK-EPAPTPGFMMRTD--LDGKVDPATVKKEMHY 416
            SSPA+       AQH+D   N+ + ++DFT ENY +V+ IL RYP N+KA+ IIP+LDLAQRQ+GGWLP+AAM+KVA IV V P++VYEVATFYTMFNREKVGK+FIQLCGTTPCM+ G+EEI+ TIE+HLGIKEGET+KDG+FTLREVECLG+CANAPM+Q+NDD+YE LTP TT ELLEACK G PPKM +WGSLP+NGQ+SCEGP GKTSL  +  P PGF MR D  L  KVDP  +K+EM Y
Sbjct:   27 SSPAIF------AQHRDTRDNTKESSFDFTTENYTKVHAILDRYPENFKASAIIPLLDLAQRQHGGWLPLAAMNKVARIVDVKPIQVYEVATFYTMFNREKVGKFFIQLCGTTPCMICGSEEIKHTIEEHLGIKEGETTKDGMFTLREVECLGACANAPMVQINDDFYENLTPETTKELLEACKCGQPPKMSKWGSLPLNGQLSCEGPQGKTSLLWDKHPPPGFRMRPDSELQPKVDPKKIKEEMLY 267
[Close]
BLAST of NO02G04060 vs. NCBI_GenBank
Match: ETM44090.1 (hypothetical protein L914_10642 [Phytophthora parasitica] >ETP42107.1 hypothetical protein F442_10982 [Phytophthora parasitica P10297])

HSP 1 Score: 352.1 bits (902), Expect = 2.400e-93
Identity = 180/281 (64.06%), Postives = 215/281 (76.51%), Query Frame = 0 
Query:  138 MLPAVLRRLGRSAAAGGLLEKSTRPAAAAATGFHSSPAVLTNYHPTAQHKDEAGNSVKDAWDFTDENYKRVNMILARYPANYKAAGIIPMLDLAQRQNGGWLPVAAMDKVASIVGVVPMRVYEVATFYTMFNREKVGKWFIQLCGTTPCMVNGAEEIRATIEKHLGIKEGETSKDGLFTLREVECLGSCANAPMIQLNDDYYECLTPATTIELLEACKKGNPPKMGRWGSLPMNGQVSCEGPHGKTSLK-EPAPTPGFMMRTD--LDGKVDPATVKKEMHY 416
            ML   +R L  SAA     + S RP AAA  GFHSS  V +++    QH+D   N+    +DFT ENY+RV+ IL RYP NYK + IIP+LDLAQRQ+GGWLP+AAM+KVA IV   P++VYEVATFYTMFNREKVGK+FIQLCGTTPCM+ G+EEI+ TIE HLGIKEGET++DG FTLREVECLG+C+NAPM+Q+NDD+YE LTP TT ELL+ACKK  PP M +WGSLPMNGQ+SCEGP GKT+LK +  P PGF MR D  L  KVDP  +K+ M Y
Sbjct:    1 MLSRSVRALRASAA-----QLSARPIAAA--GFHSSNTVGSSF---VQHRDTEDNNADTPFDFTPENYERVHAILDRYPENYKTSAIIPLLDLAQRQHGGWLPLAAMNKVARIVDAKPIQVYEVATFYTMFNREKVGKYFIQLCGTTPCMICGSEEIKKTIENHLGIKEGETTEDGKFTLREVECLGACSNAPMVQINDDFYENLTPETTRELLDACKKDVPPPMNKWGSLPMNGQLSCEGPQGKTTLKWDKVPGPGFRMRPDDELKPKVDPKDIKEAMLY 271
[Close]
BLAST of NO02G04060 vs. NCBI_GenBank
Match: POM76275.1 (NADH dehydrogenase flavoprotein 2, mitochondrial precursor [Phytophthora palmivora var. palmivora])

HSP 1 Score: 352.1 bits (902), Expect = 2.400e-93
Identity = 175/265 (66.04%), Postives = 209/265 (78.87%), Query Frame = 0 
Query:  154 GLLEKSTRPAAAAATGFHSSPAVLTNYHPTAQHKDEAGNSVKDAWDFTDENYKRVNMILARYPANYKAAGIIPMLDLAQRQNGGWLPVAAMDKVASIVGVVPMRVYEVATFYTMFNREKVGKWFIQLCGTTPCMVNGAEEIRATIEKHLGIKEGETSKDGLFTLREVECLGSCANAPMIQLNDDYYECLTPATTIELLEACKKGNPPKMGRWGSLPMNGQVSCEGPHGKTSLK-EPAPTPGFMMRTD--LDGKVDPATVKKEMHY 416
            G  + S RPAAAA  GFHSS AV +++    QH+D   N+    +DFT ENY+RV+ IL RYP NYK + IIP+LDLAQRQ+GGWLP+AAM+KVA IV   P++VYEVATFYTMFNREKVGK+FIQLCGTTPCM+ G+EEI+ TIE HLGIKEGET++DG FTLREVECLG+C+NAPM+Q+NDD+YE LTP TT ELL+ACKK  PP M +WGSLPMNGQ+SCEGP GKT+LK +  P PGF MR D  L  KV+P  +K  M Y
Sbjct:   12 GAAQLSARPAAAA--GFHSSNAVGSSF---VQHRDTEDNNPDTPFDFTPENYERVHAILDRYPENYKTSAIIPLLDLAQRQHGGWLPLAAMNKVARIVDAKPIQVYEVATFYTMFNREKVGKYFIQLCGTTPCMICGSEEIKKTIETHLGIKEGETTEDGKFTLREVECLGACSNAPMVQINDDFYENLTPETTRELLDACKKDAPPPMNKWGSLPMNGQLSCEGPQGKTTLKWDKVPGPGFRMRPDDELKPKVNPKDIKDAMLY 271
[Close]
BLAST of NO02G04060 vs. NCBI_GenBank
Match: POM76190.1 (NADH dehydrogenase flavoprotein 2, mitochondrial precursor [Phytophthora palmivora var. palmivora])

HSP 1 Score: 351.7 bits (901), Expect = 3.200e-93
Identity = 175/265 (66.04%), Postives = 209/265 (78.87%), Query Frame = 0 
Query:  154 GLLEKSTRPAAAAATGFHSSPAVLTNYHPTAQHKDEAGNSVKDAWDFTDENYKRVNMILARYPANYKAAGIIPMLDLAQRQNGGWLPVAAMDKVASIVGVVPMRVYEVATFYTMFNREKVGKWFIQLCGTTPCMVNGAEEIRATIEKHLGIKEGETSKDGLFTLREVECLGSCANAPMIQLNDDYYECLTPATTIELLEACKKGNPPKMGRWGSLPMNGQVSCEGPHGKTSLK-EPAPTPGFMMRTD--LDGKVDPATVKKEMHY 416
            G  + S RPAAAA  GFHSS AV +++    QH+D   N+    +DFT ENY+RV+ IL RYP NYK + IIP+LDLAQRQ+GGWLP+AAM+KVA IV   P++VYEVATFYTMFNREKVGK+FIQLCGTTPCM+ G+EEI+ TIE HLGIKEGET++DG FTLREVECLG+C+NAPM+Q+NDD+YE LTP TT ELL+ACKK  PP M +WGSLPMNGQ+SCEGP GKT+LK +  P PGF MR D  L  KV+P  +K  M Y
Sbjct:   12 GAAQLSARPAAAA--GFHSSNAVGSSF---VQHRDTEDNNPDTPFDFTPENYERVHAILDRYPENYKTSAIIPLLDLAQRQHGGWLPLAAMNKVARIVDAKPIQVYEVATFYTMFNREKVGKYFIQLCGTTPCMICGSEEIKKTIETHLGIKEGETTEDGKFTLREVECLGACSNAPMVQVNDDFYENLTPETTRELLDACKKDAPPPMNKWGSLPMNGQLSCEGPQGKTTLKWDKVPGPGFRMRPDDELKPKVNPKDIKDAMLY 271
[Close]
BLAST of NO02G04060 vs. NCBI_GenBank
Match: XP_009538413.1 (hypothetical protein PHYSODRAFT_566176 [Phytophthora sojae] >EGZ06516.1 hypothetical protein PHYSODRAFT_566176 [Phytophthora sojae])

HSP 1 Score: 351.3 bits (900), Expect = 4.200e-93
Identity = 178/276 (64.49%), Postives = 212/276 (76.81%), Query Frame = 0 
Query:  146 LGRSAAA--GGLLEKSTRPAAAAAT-GFHSSPAVLTNYHPTAQHKDEAGNSVKDAWDFTDENYKRVNMILARYPANYKAAGIIPMLDLAQRQNGGWLPVAAMDKVASIVGVVPMRVYEVATFYTMFNREKVGKWFIQLCGTTPCMVNGAEEIRATIEKHLGIKEGETSKDGLFTLREVECLGSCANAPMIQLNDDYYECLTPATTIELLEACKKGNPPKMGRWGSLPMNGQVSCEGPHGKTSLK-EPAPTPGFMMRTD--LDGKVDPATVKKEMHY 416
            L RS  A   G  + S RPAAA+ T GFHSS A  +++    QH+D   N+    +DFT ENY+RV+ IL RYP NYK + IIP+LDLAQRQ+GGWLP+AAM+KVA IV   P++VYEVATFYTMFNREKVGK+FIQLCGTTPCM+ G+EEI+ TIE HLGIKEGET+KDG FTLREVECLG+C+NAPM+Q+NDD+YE LTP TT ELL+AC+K  PP M +WGSLPMNGQ+SCEGP GKT+L  E  P PGF MR D  L  KV+P  +K  M Y
Sbjct:    2 LSRSVRALRAGAAQLSARPAAASTTAGFHSSRAAGSSF---VQHRDTEDNNADTPFDFTPENYERVHAILDRYPENYKTSAIIPLLDLAQRQHGGWLPLAAMNKVARIVDAKPIQVYEVATFYTMFNREKVGKYFIQLCGTTPCMICGSEEIKKTIENHLGIKEGETTKDGQFTLREVECLGACSNAPMVQINDDFYENLTPETTRELLDACQKDAPPPMNKWGSLPMNGQLSCEGPQGKTTLTWEKTPGPGFRMRPDDELKPKVNPKDIKDAMLY 274
[Close]
BLAST of NO02G04060 vs. NCBI_GenBank
Match: ETO72884.1 (hypothetical protein F444_11155 [Phytophthora parasitica P1976])

HSP 1 Score: 350.9 bits (899), Expect = 5.400e-93
Identity = 179/281 (63.70%), Postives = 214/281 (76.16%), Query Frame = 0 
Query:  138 MLPAVLRRLGRSAAAGGLLEKSTRPAAAAATGFHSSPAVLTNYHPTAQHKDEAGNSVKDAWDFTDENYKRVNMILARYPANYKAAGIIPMLDLAQRQNGGWLPVAAMDKVASIVGVVPMRVYEVATFYTMFNREKVGKWFIQLCGTTPCMVNGAEEIRATIEKHLGIKEGETSKDGLFTLREVECLGSCANAPMIQLNDDYYECLTPATTIELLEACKKGNPPKMGRWGSLPMNGQVSCEGPHGKTSLK-EPAPTPGFMMRTD--LDGKVDPATVKKEMHY 416
            ML   +R L  SA      + S RP AAA  GFHSS  V +++    QH+D   N+    +DFT ENY+RV+ IL RYP NYK + IIP+LDLAQRQ+GGWLP+AAM+KVA IV   P++VYEVATFYTMFNREKVGK+FIQLCGTTPCM+ G+EEI+ TIE HLGIKEGET++DG FTLREVECLG+C+NAPM+Q+NDD+YE LTP TT ELL+ACKK  PP M +WGSLPMNGQ+SCEGP GKT+LK +  P PGF MR D  L  KVDP  +K+ M Y
Sbjct:    1 MLSRSVRALRASAT-----QLSARPVAAA--GFHSSNTVGSSF---VQHRDTEDNNADTPFDFTPENYERVHAILDRYPENYKTSAIIPLLDLAQRQHGGWLPLAAMNKVARIVDAKPIQVYEVATFYTMFNREKVGKYFIQLCGTTPCMICGSEEIKKTIENHLGIKEGETTEDGKFTLREVECLGACSNAPMVQINDDFYENLTPETTRELLDACKKDVPPPMNKWGSLPMNGQLSCEGPQGKTTLKWDKVPGPGFRMRPDDELKPKVDPKDIKEAMLY 271
The following BLAST results are available for this feature:
BLAST of NO02G04060 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30264.12.000e-13584.95nadh dehydrogenase [Nannochloropsis gaditana][more]
XP_009033508.11.900e-9365.09hypothetical protein AURANDRAFT_59800 [Aureococcus... [more]
XP_008907055.11.900e-9364.06hypothetical protein PPTG_13082 [Phytophthora para... [more]
CCI43451.11.900e-9368.25unnamed protein product [Albugo candida][more]
CCA19114.12.400e-9368.83NADH dehydrogenase flavoprotein 2 putative [Albugo... [more]
ETM44090.12.400e-9364.06hypothetical protein L914_10642 [Phytophthora para... [more]
POM76275.12.400e-9366.04NADH dehydrogenase flavoprotein 2, mitochondrial p... [more]
POM76190.13.200e-9366.04NADH dehydrogenase flavoprotein 2, mitochondrial p... [more]
XP_009538413.14.200e-9364.49hypothetical protein PHYSODRAFT_566176 [Phytophtho... [more]
ETO72884.15.400e-9363.70hypothetical protein F444_11155 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007062NSK007062Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G04060.1NO02G04060.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|574952gene_997Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100003g74gene395Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G04060.1NO02G04060.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G04060 ID=NO02G04060|Name=NO02G04060|organism=Nannochloropsis oceanica|type=gene|length=2515bp
AGCGCGTGTCTATTTTCACCTGTTTGGGGTATTACAATGAGCAAAGTTAA
AAGAGTTGCCTTTGTTACGCGAATCGAGTTTGCACGCTTGTACAGCAGGG
GATGGAATGGTATTCGGGCTAAAAGACTTTGCCGAAAAATGGAATGCTTG
CTTTATCGCGTGGCGTTGTACTTACTACACCCGTGTGGCACAGGATGTGT
GCGTCGCCCTAGCTCGTATTGATGTGTCACTCCACCCTACTGACCGCATA
AGCAGCACACCCACAGACTCTCCCACAGACCCACGACGTGGTGTTTCGTG
TATCGATGTCGCTGCTATCGTAGCTCGTCGCGTCGTACTTGATCGTGGGC
AGCGTCTTCGTTCAGACCGACATCATCATCCTGCTGATGCATCCAACTCG
TACCATCATACCTCACACACACTCTACATGGACAGACAGGGCAAGGATCT
TCTCCTATTTCCCTCTCCTTTCCTCCTTGCGTGGTTGTCGTTTTCGTCGG
GCCTGACGCTAGTGATCATGCTGCCCGCGGTGCTGCGTCGATTGGGGCGC
TCGGCGGCTGCTGGTGGCCTCCTCGAAAAGgtacgtccccttcttttaac
tcacgcgtcatctagtgcaacgcttctgcagggtgacggaatgattctcg
tatcagtttactctgctctcgcccttctgtggcttgtcgtcgtccgcggt
ctgacctacacacatccggccctttctctaagAGCACTCGACCAGCTGCA
GCCGCCGCCACTGGCTTTCACAGCAGCCCTGCCGTGCTGACTAACTACCA
TCCTACGGCGCAGCACAAGGACGAGGCTGGGAACAGTGTGAAGGACGCCT
GGGATTTTACTGACGgtaagcaactcttttcattgcgctgacggtgttat
agtgtagtgggaatcatcgcctcctcactccctcctccccccctcccgat
ttccctactttacagAGAATTACAAGCGCGTCAACATGATTTTAGCGCGC
TACCCGGCCAATTACAAAGCGGCCGGTATCATCCCCATGCTGGACTTGGC
GCAACGGCAAAACGGCGGTTGGCTTCCGGTGGCGGCCATGGATAAAGTAG
CTTCCATTGTCGGCGTGGTGCCGATGCGTGTATATGAGGTGGCGACATTC
TACACCATGTTCAACCGgtatgtgctattttaaatttgtaatcaagacaa
ttaatatgcatgctgtgcgcacgtgcatgtatgcttgtatgtgctttttt
gattatctctctgggctctggtggtgtgaatatggctattgtggtaactg
aagcgggaaggggggtggggatgcatgtgtgtacgaggttgcggtgcttc
gtgccatgtgcaaccggtaggtaagacacggagcggtggtgtcgaagagg
atatgtcagaggtgtgcatatttgtacgcatgcatccacacattcggtga
gaacatatcggcatcgctcacttatcatccctcctttcctccctccctcc
ctccctccaatctccccccagTGAGAAGGTTGGTAAATGGTTTATTCAGC
TGTGTGGTACCACGCCTTGCATGGTGAATGGAGCCGAGGAGATCCGCGCG
ACGATTGAGAAACACCTCGGCATCAAGGAGGGGGAGACGAGCAAAGATGG
CTTGTTCACTTTGAGGGAAGTAGAGTGCCTGGGGTCATGCGCTAATGCGC
CCATGATTCAGTTGAATGATGACTACTATgtgagtaatatttttctacct
cttcgtcctatttctttccctcccgctccctccctcccttcctgagcgtt
caaggacatctagactcgtcattccactttagggcggggggaggggaagg
aagtgagggagccagatttctcgcttttcccctatgacaaaagccttttt
aaacaagaaactattgcgtttatccgctcattactcacttactcaccccc
actcactcacacctatttagGAATGCCTCACCCCCGCCACGACCATCGAG
CTACTCGAGGCGTGCAAGAAGGGGAACCCACCCAAGATGGGTCGCTGGGG
CTCGTTGCCGATGAATGGGCAAGTCTCCTGTGAGGGGCCACATGGCAAGA
CAAGTCTGAAGGAACCTGCACCCACGCCGGGTTTTATGATGCGCACGGAC
CTGGATGGGAAGGTCGACCCGGCGACGGTGAAGAAGGAGATGCATTATTA
GATTGAGAGGGGGAGTGAAAATGAACAGGGTTCATTCTCCGCGTACATGA
AAATTTATGCTACATTTTGGTGTGGTGGGCTGTGTGTTCATGGGCGTGAT
GGATGGTAGTTTGGACGTTGTCCTTGTACGAGAAGTGAGGGACATGCGCG
TATGTCGGCCCAAGCTATGGCGAGCGGGGGGGGAAGGGATGGGGAGGGAG
AGATAGGACTGAGATAAAAGATGGTTAACAGAGTGAAGTAGAAATATTAC
AAAGATGATGAGACTTCAGTGTCGTATTGGTTCTTGATGACTGGCAATTT
TACTGTCTTCTCTGT
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protein sequence of NO02G04060.1

>NO02G04060.1-protein ID=NO02G04060.1-protein|Name=NO02G04060.1|organism=Nannochloropsis oceanica|type=polypeptide|length=416bp
MVFGLKDFAEKWNACFIAWRCTYYTRVAQDVCVALARIDVSLHPTDRISS
TPTDSPTDPRRGVSCIDVAAIVARRVVLDRGQRLRSDRHHHPADASNSYH
HTSHTLYMDRQGKDLLLFPSPFLLAWLSFSSGLTLVIMLPAVLRRLGRSA
AAGGLLEKSTRPAAAAATGFHSSPAVLTNYHPTAQHKDEAGNSVKDAWDF
TDENYKRVNMILARYPANYKAAGIIPMLDLAQRQNGGWLPVAAMDKVASI
VGVVPMRVYEVATFYTMFNREKVGKWFIQLCGTTPCMVNGAEEIRATIEK
HLGIKEGETSKDGLFTLREVECLGSCANAPMIQLNDDYYECLTPATTIEL
LEACKKGNPPKMGRWGSLPMNGQVSCEGPHGKTSLKEPAPTPGFMMRTDL
DGKVDPATVKKEMHY*
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Synonyms
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