NO02G03880, NO02G03880 (gene) Nannochloropsis oceanica

Overview
NameNO02G03880
Unique NameNO02G03880
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4118
Alignment locationchr2:1058565..1062682 +

Link to JBrowse

Properties
Property NameValue
DescriptionPentatricopeptide repeat-containing protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:1058565..1062682 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
Homology
BLAST of NO02G03880 vs. NCBI_GenBank
Match: EWM30215.1 (pentatricopeptide repeat-containing protein [Nannochloropsis gaditana])

HSP 1 Score: 1387.9 bits (3591), Expect = 0.000e+0
Identity = 719/1081 (66.51%), Postives = 820/1081 (75.86%), Query Frame = 0
Query:  126 PTPSAVVDYGEEA-GASLPPPVTALVDSKQELFDALQSHTGRREAFEGLWNSDFEFTEAEYQELLKACFRLGYVNPFKDLVDEVQRLGVPVAPETWTACIYIASSRDFFRLGIACLEKMVECGTIPDGKAFNQVMACCEKKGRGEEAMHLFNFMRGHGIEAPPLTYWALASLLSCEGRWDDFKIVEENLRARDFPESIKERFYSTAVVARSGARDWQGALDMLRRMHECGAVPSIRGFTTALSTCMAAGAYQAVRDFVEEVRGWAIFDFDVATYNVVINSYASERNLEGASTWFEKIYEAGLRPSLISYSTIFKVCTSVKRGDLAKEYLERLVSEGDVHPNLITLNHAIQALAISRSHVEDARELLETMRDRFGVVPNATAYTFLLRAAGEKGDARLAMELYHRMKRVDGLVPEPRTIWEATIACTKSRFFAPMEELADDLMALSADSPEGEDVXXXXXXXXXXXXXXXXXDLKYMGREGGRREGQAQG-------QGGYDSVRSLLYAYNAVLTALEKNGDGKLALRVYAHMQAQGLHADPMAIARLLEALNKGKMPERGLKIWSELEGRRAEVRENVNITNAVLNAMSSVDPLTAVEFFQDLREKGQVDDRSYTFAFAAYDNLGDVTGVRRLWSEMRTLGLAFDRVSYGSLLRALANAGEIDQAMDGLRRSEEVGVPLNNYTVALTLIGCKRSRRWSTALSMLRELRDEKGLILNVVCYNSVLTVCNAAGQWRACLKLLDEMKEHDISPDYTSLRVTLNALASAGRNNEIVRLYRLHEQEGGVLSRKLDNFAFRLVANAFIKFDPVEAVGMIQSYLTTFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIDSRLYKTLITALGHKGEWSQALDVLKSLPPPLRDISTVSAAVSALLRSEQYIRARDLVVEAEESSRSSKNMRFDSVADSLGLQAAYMAKDFPQAQIYLDRLSKEGSHANSSVNFGFCLLAKQGKWLELVSLLSEIVKIQQQGGKEGRGEGGRKFVVSRTTLETFANLTS-----------XXXXXXXXXXXXXXXPEPAVLTQIVEMLSKM 1188
            P  S  +  G +A G  +   + A+  SK +LF+ LQSH  R+EAFE LWNSDFEF+E+EYQ+LLKACFRLGYVNPF DLVDE+QRL VP+A ETWTACIYIASS+DFFRLGIACL++MV  G  PD KA NQVMACCEKKGRGEEAM LF FMR HG+E PPLTYWALASLLSC GRW+DFKIVEE+LR RDFPESIKERFYSTAVVARSGARDW+G+LDMLRRM ECGAVPSIRGFTTALSTCMAAGAYQAVRDFVEEV+GWAIFD DVATYNVVINSYASER+LEGA  WFEKIYEAGLRPSLISYSTIFKVC S KRGDLA  +L+RLV E D+ P+L+TLNHA+QAL  S+ H +DAR LLETM  RFGV PNA+ YT LLRAA EKGDARLA+ELYHRMK V  L PEPR+IWE T+ACTKSRFF P+EEL DDLMALS     G+                    L      GG  EG   G          YD  RSLLYAY+A+++ LEK G+G+LALR++AHMQAQGL AD   I RLLEALNKG+MPER LKIWS+LEGRR +VR NVN+TNAVL+AM++VDPL AVEFF D+R++ QVDDRSYT+AF AYDNLGD+TGV+RLW EMR  GL FDRVSYGSLLRALA+AGE+ QAM+GLR SE VGVPLNNYT+ALTLIGCKR+R+WSTALSMLRELRDE+GL LNVVCYNSVLTVCNAAGQWRACL+LL+EM EH +  DYTSLRVTLNALASAGR NE+V LYR HE+  GVL+RKLD FAFRL+ANAFIK DPV AV MI+ ++  F                                               L+DSRLYK+LITALGHKGEW QA+ VL++L PPLRDIST+SA  SALLRSEQY RARDL++EAEE+   +   +FD VADSLGLQAAYMA+D+ QA +YLDRL + G+H NSS NFGFCLLAKQGKW EL +LL +I ++Q+        E GR+++VSRTTLETFANLTS                           EPAVL  I+E + KM
Sbjct:  143 PFGSTCLRVGLQAQGTEVSRDIIAVARSKADLFEDLQSHARRKEAFETLWNSDFEFSESEYQDLLKACFRLGYVNPFNDLVDEIQRLNVPIALETWTACIYIASSQDFFRLGIACLKRMVHWGVRPDSKAINQVMACCEKKGRGEEAMRLFLFMRDHGVEVPPLTYWALASLLSCGGRWEDFKIVEEDLRKRDFPESIKERFYSTAVVARSGARDWKGSLDMLRRMRECGAVPSIRGFTTALSTCMAAGAYQAVRDFVEEVQGWAIFDLDVATYNVVINSYASERDLEGALAWFEKIYEAGLRPSLISYSTIFKVCASTKRGDLALTFLDRLVREEDLQPSLVTLNHALQALTASQEHFDDARRLLETMEARFGVAPNASTYTSLLRAASEKGDARLALELYHRMKDVAVLAPEPRSIWEVTVACTKSRFFEPLEELVDDLMALSEKVLAGD---RQDHVGPAGGAVASVPALPGTSEGGGSGEGALGGGVPPPNSSRKYDPTRSLLYAYSALMSGLEKAGEGELALRLHAHMQAQGLEADTATIVRLLEALNKGRMPERSLKIWSDLEGRREDVRRNVNVTNAVLSAMAAVDPLAAVEFFHDMRDRDQVDDRSYTYAFTAYDNLGDITGVQRLWEEMRVRGLTFDRVSYGSLLRALAHAGEVKQAMEGLRHSENVGVPLNNYTIALTLIGCKRTRQWSTALSMLRELRDERGLSLNVVCYNSVLTVCNAAGQWRACLRLLEEMGEHQVEIDYTSLRVTLNALASAGRYNEVVSLYRRHEELDGVLARKLDTFAFRLIANAFIKVDPVAAVSMIKKHVQRFS--GGAVRSGAGDVPVGSSQPGRHQYHRSSAGSPARQFRRGQEQSTALVDSRLYKSLITALGHKGEWEQAVQVLQALEPPLRDISTISATASALLRSEQYSRARDLLLEAEETVPGA---QFDGVADSLGLQAAYMAEDYAQAGLYLDRLIQAGNHGNSSANFGFCLLAKQGKWQELSTLLLDISRLQE--------EHGRRYIVSRTTLETFANLTSWTLDSEAPGGMVKSLNAEGSEGEMEHVEPAVLANIMETVCKM 1207          
BLAST of NO02G03880 vs. NCBI_GenBank
Match: XP_005856229.1 (pentatricopeptide repeat-containing protein, partial [Nannochloropsis gaditana CCMP526] >EKU20126.1 pentatricopeptide repeat-containing protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 718.8 bits (1854), Expect = 2.900e-203
Identity = 364/521 (69.87%), Postives = 406/521 (77.93%), Query Frame = 0
Query:  126 PTPSAVVDYGEEA-GASLPPPVTALVDSKQELFDALQSHTGRREAFEGLWNSDFEFTEAEYQELLKACFRLGYVNPFKDLVDEVQRLGVPVAPETWTACIYIASSRDFFRLGIACLEKMVECGTIPDGKAFNQVMACCEKKGRGEEAMHLFNFMRGHGIEAPPLTYWALASLLSCEGRWDDFKIVEENLRARDFPESIKERFYSTAVVARSGARDWQGALDMLRRMHECGAVPSIRGFTTALSTCMAAGAYQAVRDFVEEVRGWAIFDFDVATYNVVINSYASERNLEGASTWFEKIYEAGLRPSLISYSTIFKVCTSVKRGDLAKEYLERLVSEGDVHPNLITLNHAIQALAISRSHVEDARELLETMRDRFGVVPNATAYTFLLRAAGEKGDARLAMELYHRMKRVDGLVPEPRTIWEATIACTKSRFFAPMEELADDLMALSADSPEGEDVXXXXXXXXXXXXXXXXXDLKYMGREGGRREGQAQG-------QGGYDSVRSLLYAYNAVLTALEKNG 639
            P  S  +  G +A G  +   + A+  SK +LF+ LQSH  R+EAFE LWNSDFEF+++EYQ+LLKACFRLGYVNPF DLVDE+QRL VP+A ETWTACIYIASS+DFFRLGIACL++MV  G  PD KA NQVMACCEKKGRGEEAM LF FMR HG+E PPLTYWALASLLSC GRW+DFKIVEE+LR RDFPESIKERFYSTAVVARSGARDW+G+LDMLRRM ECGAVPSIRGFTTALSTCMAAGAYQAVRDFVEEV+GWAIFD DVATYNVVINSYASER+LEGA  WFEKIYEAGLRPSLISYSTIFKVC S KRGDLA  +L+RLV E D+ P+L+TLNHA+QAL  S+ H +DAR LLETM  RFGV PNA+ YT LLRAA EKGDARLA+ELYHRMK V  L PEPR+IWE T+ACTKSRFF P+EEL DDLMALS     G+                    L      GG  EG   G          YD  RSLLYAY+A+++ LEK G
Sbjct:  100 PFGSTCLRVGLQAQGTEVSRDIIAVARSKADLFEDLQSHARRKEAFETLWNSDFEFSKSEYQDLLKACFRLGYVNPFNDLVDEIQRLNVPIALETWTACIYIASSQDFFRLGIACLKRMVHWGVRPDSKAINQVMACCEKKGRGEEAMRLFLFMRDHGVEVPPLTYWALASLLSCGGRWEDFKIVEEDLRKRDFPESIKERFYSTAVVARSGARDWKGSLDMLRRMRECGAVPSIRGFTTALSTCMAAGAYQAVRDFVEEVQGWAIFDLDVATYNVVINSYASERDLEGALAWFEKIYEAGLRPSLISYSTIFKVCASTKRGDLALTFLDRLVREEDLQPSLVTLNHALQALTASQEHFDDARRLLETMEARFGVAPNASTYTSLLRAASEKGDARLALELYHRMKDVAVLAPEPRSIWEVTVACTKSRFFEPLEELVDDLMALSEKVLAGD---RQDHVGPAGGAVASVPALPGTSEGGGSGEGALGGGVPPPNSSRKYDPTRSLLYAYSALMSGLEKAG 617          
BLAST of NO02G03880 vs. NCBI_GenBank
Match: XP_005856234.1 (hypothetical protein NGA_2104200, partial [Nannochloropsis gaditana CCMP526] >EKU20131.1 hypothetical protein NGA_2104200, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 679.1 bits (1751), Expect = 2.600e-191
Identity = 358/565 (63.36%), Postives = 418/565 (73.98%), Query Frame = 0
Query:  634 LEKNGDGKLALRVYAHMQAQGLHADPMAIARLLEALNKGKMPERGLKIWSELEGRRAEVRENVNITNAVLNAMSSVDPLTAVEFFQDLREKGQVDDRSYTFAFAAYDNLGDVTGVRRLWSEMRTLGLAFDRVSYGSLLRALANAGEIDQAMDGLRRSEEVGVPLNNYTVALTLIGCKRSRRWSTALSMLRELRDEKGLILNVVCYNSVLTVCNAAGQWRACLKLLDEMKEHDISPDYTSLRVTLNALASAGRNNEIVRLYRLHEQEGGVLSRKLDNFAFRLVANAFIKFDPVEAVGMIQSYLTTFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIDSRLYKTLITALGHKGEWSQALDVLKSLPPPLRDISTVSAAVSALLRSEQYIRARDLVVEAEESSRSSKNMRFDSVADSLGLQAAYMAKDFPQAQIYLDRLSKEGSHANSSVNFGFCLLAKQGKWLELVSLLSEIVKIQQQGGKEGRGEGGRKFVVSRTTLETFANLTS-----------XXXXXXXXXXXXXXXPEPAVLTQIVEMLSKM 1188
            LEK G+G+LALR++AHMQAQGL AD   I RLLEALNKG+MPER LKIWS+LEGRR +VR NVN+TNAVL+AM++VDPL AVEFF D+R++ QVDDRSYT+AF AYDNLGD+TGV+RLW EMR  GL FDRVSYGSLLRALA+AGE+ QAM+GLR SE VGVPLNNYT+ALTLIGCKR+R+WSTALSMLRELRDE+GL LNVVCYNSVLTVCNAAGQWRACL+LL+EM EH +  DYTSLRVTLNALASAGR NE+V LYR HE+  GVL+RKLD FAFRL+ANAFIK DPV AV MI+ ++  F                                               L+DSRLYK+LITALGHKGEW QA+ VL++L PPLRDIST+SA  SALLRSEQY RARDL++EAEE+   +   +FD VADSLGLQAAYMA+D+ QA +YLDRL + G+H NSS NFGFCLLAKQGKW EL +LL +I ++Q+        E GR+++VSRTTLETFANLTS                           EPAVL  I+E + KM
Sbjct:    2 LEKAGEGELALRLHAHMQAQGLEADTATIVRLLEALNKGRMPERSLKIWSDLEGRREDVRRNVNVTNAVLSAMAAVDPLAAVEFFHDMRDRDQVDDRSYTYAFTAYDNLGDITGVQRLWEEMRVRGLTFDRVSYGSLLRALAHAGEVKQAMEGLRHSENVGVPLNNYTIALTLIGCKRTRQWSTALSMLRELRDERGLSLNVVCYNSVLTVCNAAGQWRACLRLLEEMGEHQVEIDYTSLRVTLNALASAGRYNEVVSLYRRHEELDGVLARKLDTFAFRLIANAFIKVDPVAAVSMIKKHVQRFS--GGAVRSGAGDVPVGSSQPGRHQYHRSSAGSPARQFRRGQEQSTALVDSRLYKSLITALGHKGEWEQAVQVLQALEPPLRDISTISATASALLRSEQYSRARDLLLEAEETVPGA---QFDGVADSLGLQAAYMAEDYAQAGLYLDRLIQAGNHGNSSANFGFCLLAKQGKWQELSTLLLDISRLQE--------EHGRRYIVSRTTLETFANLTSWTLDSEAPGGMVKSLNAEGSEGEMEHVEPAVLANIMETVCKM 553          
BLAST of NO02G03880 vs. NCBI_GenBank
Match: XP_010905005.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g13650 [Elaeis guineensis] >XP_010905006.1 PREDICTED: pentatricopeptide repeat-containing protein At4g13650 [Elaeis guineensis] >XP_010905007.1 PREDICTED: pentatricopeptide repeat-containing protein At4g13650 [Elaeis guineensis] >XP_010905008.1 PREDICTED: pentatricopeptide repeat-containing protein At4g13650 [Elaeis guineensis] >XP_019701799.1 PREDICTED: pentatricopeptide repeat-containing protein At4g13650 [Elaeis guineensis])

HSP 1 Score: 103.2 bits (256), Expect = 5.800e-18
Identity = 134/650 (20.62%), Postives = 264/650 (40.62%), Query Frame = 0
Query:  264 KKGRGEEAMHLFNFMRGHGIEAPPLTYWALASLLSCEGRWDDFKIVEENLRARDFPESIKERFYSTAVVARSGARDWQGALDMLRRMHECGAVPSIRGFTTALSTCMAAGAYQAVRDFVEEVRGWAIFDFDVATYNVVINSYASERNLEGASTWFEKIYEAGLRPSLISYSTIFKVCTSVKRGDLAK-EYLERLVSEGDVHPNLITLNHAIQALAISRSHVEDARELLETMRDRFGVVPNATAYTFLLRAAGEKGDARLAMELYHRMKRVDGLVPEPRTIWEATIACTKSRFFAPMEELADDLMALSADSPEGEDVXXXXXXXXXXXXXXXXXDLKYMGREGGRREGQAQGQGGYDSVRSLLYAYNAVLTALEKNGDGKLALRVYAHMQAQGLHADPMAIARLLEALNKGKMPERGLKIWSE--LEGRRAEVRENVNITNAVLNAMSSVDPL-TAVEFFQDLREKGQVDDRSYTFAFAAYDNLGDVTGVRRLWSEMRTLGLAFDRVSYGSLLRALANAGEIDQAMDGLRRSEEVG----VPLNNYTVALTLIGCKRSRRWSTALSMLRELRDEKGLILNVVCYNSVLTVCNAAGQWRACLKLLDEMKEHDISPDYTSLRVTLNALASAGRNNEIVRLYRLHEQEGGVLSR 906
            + G GEEA+HL++ M   GI   P   + L+S+LS   + D+F+  ++        + IK+ F S   V  +                            T  S C   G+ +   +   ++        D  TYN +I+ +A   N E A   F+++  +G +P  ++ +++   C S+  GD+ K + L   V +  +    I +  ++  L +  + +E A E   T  DR     N   +  +L A G+ G+   + +L++ M +V+G+ P   T       CT    +    +L + +  L+  +    +V                   + +      ++               + ++ A++    ++     ALR +  MQ  G+  D + +A  + A    K  E+GL+I ++  + G   +    +++ NA++N  +    +  A   F+ +  K   D+ S+    + +   G      +++ +M   G+  +  ++GS++ A AN  +I Q      R  + G    + +NN  V+L    C            + E         N V +N+++T C+  G  R  LKL ++MK+ D+ P+Y +    L A +  G  NE +  +    +E G++ R
Sbjct:  290 QNGLGEEALHLYSQMHRSGIIPTP---YVLSSVLSACTKTDNFEHGKQ-----IHAQVIKQGFSSETFVGNA--------------------------LVTLYSRC---GSLRRAEEIFSDMP-----HHDGVTYNTLISGHAQNGNSENAIEIFKEMQLSGFKPDSVTIASLLTACASI--GDIRKGKQLHSYVFKSGLSSEYI-IEGSLLDLYVKCAAIETAHEFFNT-TDR----ENVVLWNVMLVAYGQMGNLGKSFDLFYEM-QVEGVQPNQFTYPSILRTCT----YVGALDLGEQIHTLTIKTGFELNVYVSSVLIDMYSKCGQLKSARAILERITEKD---------------VVSWTAMIAGYAQHELYVEALRTFEEMQIHGIQPDNIGLASAISACAGIKAIEQGLQIHAQACISGYSTD----ISVGNALINLYAKCGRIEEAYSAFETVEVK---DEISWNGLISGFAQSGHCEEALKVFVQMDRAGVKSNSFTFGSVVSASANMADIKQGKQIHARIIKTGYDSEIEVNNALVSL-YAKCGSIEDAKMGFFGMSE--------RNEVSWNAMITGCSQHGCGREALKLFEKMKQEDLKPNYVTFIGVLAACSHVGLVNEGLDYFYSMSEEHGIVPR 853          
BLAST of NO02G03880 vs. NCBI_GenBank
Match: XP_009420355.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g09650, chloroplastic [Musa acuminata subsp. malaccensis])

HSP 1 Score: 91.3 bits (225), Expect = 2.300e-14
Identity = 127/568 (22.36%), Postives = 233/568 (41.02%), Query Frame = 0
Query:  333 ARSGARDWQGALDMLRRMHECGAVPSIRGFTTALSTCMAA----GAYQAVRDF---VEEVRGWAIFDF---DVATYNVVINSYASERNLEGASTWFEKIYEAGLRPSLISYSTIFKVCTSVKRGDLAKEYLERLVSEGDVHPNLITLNHAIQALAISRSHVEDARELLETMR----DRFGVVPNATAYTFLLRAAGEKGDARLAMELYHRMKRVDGLVPEPRTIWEATIACTKSRFFAPMEELADDLMALSADSPEGEDVXXXXXXXXXXXXXXXXXDLKYMGREGGRREGQAQGQGGYDSVRSLLYAYNAVLTALEKNGDGKLALRVYAHMQAQGLHADPMAIARLLEALNKGKMPERGLKIWSELEGRRAEVRENVNITNAVLNAMSSVDPLTAVEFFQDLREKGQVDDR-SYTFAFAAYDNLGDVTGVRRLWSEM-RTLGLAFDRVSYGSLLRALANAGEIDQAMDGLRRSEEVGVPLNNYTVALTLIGCKRSRRWSTALSMLRE----------LRDEKGLILNVVCYNSVLTVCNAAGQWRACLKLLDEMKEHDISPDYTSLR 875
            ARSGA  +  AL +LR M   G +P ++ ++  +S   A+    G  +A+R F   +  VR  A+      DVA +N  +N+ A+  ++   +  F+++ E G+ P +++++ + K+C   +R DL    LERL++ G V P + TL H++ A  +    +  A +L++ MR    D   ++  +   T + R   E       + +Y  +    G   EP  + +A         + P   +   LM         EDV                       R     + +A      D V      Y  V++AL K G    A  V A M   G+ A+ +    LL+   +    +   ++  ++                    +   D   A+ +F ++RE+G    + SYT    A+   G      +++ EM +   +  DRV+Y  L+      G I++A   + + ++ G   +  T      G   +R+   AL +  E          LR ++GL+      +++  VC  A  +R  L+++  M+E+ ISP+ T  +
Sbjct:  138 ARSGATSY--ALAVLRTMLRSGYLPHVKAWSAVVSRLSASPDDGGPGEALRLFDSVLRRVRRVAVSTDARPDVAAFNAALNACANLGDVRRFAQLFDEMPEFGVEPDVLTHNVLIKMCARAERKDLLIFVLERLITSGLV-PCITTL-HSLVAAYVGLDDLVTAEKLVQAMREGRQDLCLILRQSNDGTSIDRIDEEAHALLEKLVMYRHLTECHGNGNEPPLLPKA---------YFPDSRMYTTLMKGYVKEGRVEDVI----------------------RMTRAMQLEADPASHPDHV-----TYTTVISALIKVGAMDRARSVLADMGNAGVPANRVTYNVLLKGYCQQLQLDEAKELVRDMSKHXXXXXXXXXXXXXXXGCILVDDSAGALAYFNEMRERGITPSKVSYTTLMKAFALSGQPKLAHKVFDEMEKDPRVKVDRVAYNMLIEGYCRLGLIEEAKKIVEKMKQNGFQPDVATYGSLANGIALARKPGEALLLWNEVKERCAASPPLRPDEGLL------DALADVCVRAAFFRKALEIVACMEENGISPNKTKYK 659          
BLAST of NO02G03880 vs. NCBI_GenBank
Match: XP_021653376.1 (pentatricopeptide repeat-containing protein At5g27110-like [Hevea brasiliensis])

HSP 1 Score: 90.9 bits (224), Expect = 3.000e-14
Identity = 108/516 (20.93%), Postives = 221/516 (42.83%), Query Frame = 0
Query:  394 DVATYNVVINSYASERNLEGASTWFEKIYEAGLRPSLISYSTIFKVCTSVKRGDLAKEYLERLVSEGDVHPNLITLNHAIQALAISRSHVEDARELLETMRDRFGVVPNATAYTFLLRAAGEKGDARLAMELYHRMKRVDGLVPEPRTIWEATIACTKSRFFAPMEELADDLMALSADSPEGEDVXXXXXXXXXXXXXXXXXDLKYMGREGGRREGQAQGQGGYDSV--RSLLYAYNAVLTALEKNGDGKLALRVYAHMQAQGLHADPMAIARLLEALNKGKMPERGLKIWSELEGRRAEVRENVNITNAVLNAMSSVDPL-TAVEFFQDLREKGQVDDRSYTFAFAAYDNLGDVTGVRRLWSEMRTLGLAFDRVSYGSLLRALANAGEIDQA---MDGLRRSEEVGVPLNNYTVALTLIG-CKRSRRWSTALSMLRELRDEKGLILNVVCYNSVLTVCNAAGQWRACLKLLDEMKEHDISPDYTSLRVTLNALASAGRNNEIVRLYRLHEQEGGV 903
            DVA++N VI+ Y    + + A   F+K+ E+G  P+L++ +T+   C  +   +  KE    ++  G V    +  + A+  L      ++ A+++ E M  +        A+  ++      GD+R  +EL+ RM  ++G  P   T+    +AC+++        L   ++  S ++                       DL +       + G+ Q       +  R+ +  +N +++     G+   AL +Y  M+  G+  D +  + +L A ++    E+G +I + +  R  E   N  +  A+L+  +    +  A   F  L E+  V   S+T    AY + G      RL+ EM+      D V++  +L A ++AG +D+     + +     +   + +Y+  + L+G   R R     L   RE+ ++ GL+      +++ + C+         ++   + + D  PD  S  +TL+ + +  +N ++VR  RL  +E G+
Sbjct:  171 DVASWNTVISCYYQYGDAKKALELFDKMRESGFEPNLVTLTTVISSCARLLDLERGKEIHREMMKSGKVLDGFV--SSALVDLYGKCGCLDIAKDIFEQMPKK-----TLVAWNSMISGYSSVGDSRECIELFKRM-NIEGTKPTLTTLSSILMACSRAAQLRHGRFLHGYVIRNSIEA--------------DIFVNSGLIDLYF-------KCGRVQSAENVFEMLPRANVVCWNVMISGYVTVGNYFEALNMYDDMKVAGVKPDAVTFSSVLSACSQLAALEKGKEIHNCISERGLE--SNEIVMGALLDMYAKCGAVDEAYNVFNKLPERDLV---SWTSMITAYGSHGQALEALRLFGEMQQSNAKPDAVTFLEVLSACSHAGLVDKGYYYFNLMTDKYGINPRIEHYSCLIDLLGRAGRLREAYNILHNTREITEDVGLL------STLFSACHLHRDLELGEEIAKLLLKKD--PDDPSTYITLSNMYAFVKNWDMVRRVRLRMKELGL 644          
BLAST of NO02G03880 vs. NCBI_GenBank
Match: OWM69147.1 (hypothetical protein CDL15_Pgr025334 [Punica granatum])

HSP 1 Score: 89.7 bits (221), Expect = 6.700e-14
Identity = 94/429 (21.91%), Postives = 180/429 (41.96%), Query Frame = 0
Query:  185 YQELLKACFRLGYVNPFKDLVDEVQRLGVPVAPETWTACIYIASSRDFFRLGIACLEKMVECGTIPDGKAFNQVMACCEKKGRGEEAMHLFNFMRGHGIEAPPLTYWALAS-----------------LLSCEGRWDDF---KIVE------ENLRARDFPESIKER---FYSTAVVARSGARDWQGALDMLRRMHECGAVPSIRGFTTALSTCMAAGAYQAVRDFVEEVRGW--------------AIFDF--------------------DVATYNVVINSYASERNLEGASTWFEKIYEAGLRPSLISYSTIFKVCTSVKRGDLAKEYLERLVSEGDVHPNLITLNHAIQALAISRSHVEDARELLETMRDRFGVVPNATAYTFLLRAAGEKGDARLAMELYHRMKRVDGLVPEPRTIWEATIACT 551
            Y  +LKAC  LG V   +    ++ + G        ++ + + ++   FR  +   ++M E     D   +N VM+CC + GR E+A+ LF  M+G G++   +T+    S                 L+ C    D F    +V+      E  +A++  E + E+    ++  +   S   D    + +L+RM+  G  PS+      LS+ + A +  A     + + G+              ++ DF                    DV ++NV+I+ YAS  N   A   F+++   G RP  I++++I  VC+ +   +  KE +   + E     N I +   ++  A     V +A ++ E ++     + +  ++T ++ A G  G AR ++ L+ +M R + + P+  T      AC+
Sbjct:  111 YPNVLKACGELGRVGNGEAFHAQLVKAGCLSDVVIGSSAVSMYANCRRFRDAVRVFDEMGE----RDAACWNTVMSCCYQSGRPEKALELFERMKGSGVKPSLVTFTTAISSCSRLLDLERGKEIHGELVKCGLPLDGFVGSALVDMYGKCGELEKAKEIFEQMPEKTVISWNAMISGFSLIGDSSLCIGLLKRMNGEGIKPSL----ATLSSILTAASRSAQLQDGKFIHGYIIRNGVALDLFLDCSLIDFYFKCGRVASAENVFRKSGRMDVNSWNVMISGYASVGNYFEALEIFDEMKRVGGRPDAITFTSILSVCSQLASLEKGKE-IHETIKESRFETNGIVMGALLEMYA-KCGAVNEAHQVFERLQ-----IKDLMSWTSMIAAYGSHGRARESLNLFAKM-RAENIEPDKVTFLAVLSACS 523          
BLAST of NO02G03880 vs. NCBI_GenBank
Match: XP_021653412.1 (pentatricopeptide repeat-containing protein At5g27110-like [Hevea brasiliensis])

HSP 1 Score: 89.7 bits (221), Expect = 6.700e-14
Identity = 108/516 (20.93%), Postives = 220/516 (42.64%), Query Frame = 0
Query:  394 DVATYNVVINSYASERNLEGASTWFEKIYEAGLRPSLISYSTIFKVCTSVKRGDLAKEYLERLVSEGDVHPNLITLNHAIQALAISRSHVEDARELLETMRDRFGVVPNATAYTFLLRAAGEKGDARLAMELYHRMKRVDGLVPEPRTIWEATIACTKSRFFAPMEELADDLMALSADSPEGEDVXXXXXXXXXXXXXXXXXDLKYMGREGGRREGQAQGQGGYDSV--RSLLYAYNAVLTALEKNGDGKLALRVYAHMQAQGLHADPMAIARLLEALNKGKMPERGLKIWSELEGRRAEVRENVNITNAVLNAMSSVDPL-TAVEFFQDLREKGQVDDRSYTFAFAAYDNLGDVTGVRRLWSEMRTLGLAFDRVSYGSLLRALANAGEIDQA---MDGLRRSEEVGVPLNNYTVALTLIG-CKRSRRWSTALSMLRELRDEKGLILNVVCYNSVLTVCNAAGQWRACLKLLDEMKEHDISPDYTSLRVTLNALASAGRNNEIVRLYRLHEQEGGV 903
            DVA++N VI+ Y    + + A   F+K+ E+G  P+L++ +T+   C  +   +  KE    ++  G V    +  + A+  L      ++ A+++ E M  +        A+  ++      GD+R  +EL+ RM  ++G  P   T+    +AC+++        L   ++  S ++                       DL +       + G+ Q       +  R+ +  +N +++     G+   AL +Y  M+  G+  D +  + +L A ++    E+G +I + +  R  E   N  +  A+L+  +    +  A   F  L E+  V   S+T    AY + G      RL+ EM+      D V++  +L A ++AG +D+     + +     +   + +Y+  + L+G   R R     L   RE+ ++ GL+      +++ + C          ++   + + D  PD  S  +TL+ + +  +N ++VR  RL  +E G+
Sbjct:  171 DVASWNTVISCYYQYGDAKKALELFDKMRESGFEPNLVTLTTVISSCARLLDLERGKEIHREMMKSGKVLDGFV--SSALVDLYGKCGCLDIAKDIFEQMPKK-----TLVAWNSMISGYSSVGDSRECIELFKRM-NIEGTKPTLTTLSSILMACSRAAQLRHGRFLHGYVIRNSIEA--------------DIFVNSGLIDLYF-------KCGRVQSAENVFEMLPRANVVCWNVMISGYVTVGNYFEALNMYDDMKVAGVKPDAVTFSSVLSACSQLAALEKGKEIHNCISERGLE--SNEIVMGALLDMYAKCGAVDEAYNVFNKLPERDLV---SWTSMITAYGSHGQALEALRLFGEMQQSNAKPDAVTFLEVLSACSHAGLVDKGYYYFNLMTDKYGINPRIEHYSCLIDLLGRAGRLREAYNILHNTREITEDVGLL------STLFSACYLHRDLELGEEIAKLLLKKD--PDDPSTYITLSNMYAFVKNWDMVRRVRLRMKELGL 644          
BLAST of NO02G03880 vs. NCBI_GenBank
Match: XP_024518767.1 (pentatricopeptide repeat-containing protein At2g13600-like isoform X2 [Selaginella moellendorffii])

HSP 1 Score: 89.0 bits (219), Expect = 1.100e-13
Identity = 146/727 (20.08%), Postives = 290/727 (39.89%), Query Frame = 0
Query:  168 EAFEGLWNSDFEFTEAEYQELLKACFRLGYVNPFKDLVDEVQRLGVPVAPETWTACIYIASSRDFFR---LGIACLEKMVECGTIPDGKAFNQVMA-----C-------CEKKGRGEEAMHLFNFMRGHGIEAPPLTYWALASLLSCEGRWDDFKIVEENLRARDFPESIKERFYSTAVVARSGARDWQGALDMLRRMHECGAVPSIRGFTTALSTCMAAGAYQAVRDFVEEVRGWAIFDFDVATYNVVINSYASERNLEGASTWFEKIYEAGLRPSLISYSTIFKVCTSV---KRGD-LAKEYLERLVSEGDVHPNLITLNH---------AIQALAISRSHVEDARELLETMRDRFGVVPNATAYTFLLRAAGEKGDARLAMELYHRMKRVDGLVPEPRTIWEATIAC------TKSRFFA---PMEELADDLMALSADSPEGEDVXXXXXXXXXXXXXXXXXDLKYMGREGGRREGQAQGQGGYD-SVRSLLYAYNAVLTALEKNGDGKLALRVYAHMQAQ-GLHADPMAIARLLEALNKGKMPERGLKIWSELEGRRAEVRENVNITNAVLNAMSSVDPLT-AVEFFQDLREKGQVDDRSYTFAFAAYDNLGDVTGVRRLWSEMRTLGLAFDRVSYGSLLRALANAGEIDQA---MDGLRRSEEVGVPLNNYTVALTLIGCKRSRRWSTALSMLRELRDEKGLILNVVCYNSVLTVCNAAGQW 852
            E F  + +   E     +   LKAC  L  + P + +   V +LG   +    +A    A+ R F +   +    ++   +CG++ D  +  + MA     C       C + G  E A+ +F  M+  G      TY A+ +  +   + ++ K+V      ++    + ++ +  A      +  + G   ++    +CG++               A A++      E          DV ++  ++  Y      E A + FE +   G  P   S+      CTS+   + GD LAK     L    D+H +L   N          A+  +  +   +++AR + E +  R  V+ N+     L+      G+A L  EL+ +M R  G  P+ ++   A  AC       + +  +      E  + +MAL +++ +   +                  L                +  +D  +   + ++NA+++AL +N +G+LAL ++  MQ Q G   D   +   L A       + G +I +++   R  +  NV + N++++       ++ + + F+ + +   V   ++T   A Y   GD      L+ EM+  G+  DR++Y S+L A ++AG +++     + +R   ++ V   +Y   + L+G  R+     A+ +L+       +  NVV + + L  C   G+W
Sbjct:  161 EMFSQMVSRGCEPNSRTFVAALKACATLASLEPGELVDGRVLKLG---SLRKGSAIHSQAAKRGFDKDIFVASTLVDMYCKCGSLADATSVFRGMARRDVVCWTSLILGCAENGEEELALEMFYSMQSEGCSPNSRTYVAVLAACAGVAQKEEAKLVAGQY-LKEVTLEVGKKIHLDATKGGFQSDTFVGN-SLIGMYAKCGSL---------------ADAHKVFDRMPER---------DVVSWTALMLGYVECGEAEVAFSLFESMVSGGCVPDGRSFVAALMACTSLAEQEEGDKLAKVKSGALKRGMDIH-SLAARNRWDADIFVATALVDMYANSGSMDNARTVFEKVLHRDVVLWNS-----LMLGYVRNGEAELVFELFTKM-RSQGCPPDSQSFVAALTACGNLAERDEGKHVSGKVVKVECLEKVMALHSEAGKTGKLGDMFVANTLVDVYAKCGSL-------------LDCRAAFDRMLHHDVVSWNALMSALVENSEGQLALDLFTSMQQQSGFLPDSRTVVAALSACGCVVALQTGKQIQADI--CRCGLENNVLVANSLVDFYGRCGRISVSQQLFEAVTDPRSVS--AWTSLIAGYSRQGDAQKTIELFEEMQRQGMKGDRITYLSVLAACSHAGLVEKGKTYFEAMRADRDITVDAVHYACMVDLLG--RANYLDEAIVVLK-----SNIPSNVVAWTAFLGAC---GKW 824          
BLAST of NO02G03880 vs. NCBI_GenBank
Match: XP_024518766.1 (pentatricopeptide repeat-containing protein At4g39530-like isoform X1 [Selaginella moellendorffii])

HSP 1 Score: 89.0 bits (219), Expect = 1.100e-13
Identity = 146/727 (20.08%), Postives = 290/727 (39.89%), Query Frame = 0
Query:  168 EAFEGLWNSDFEFTEAEYQELLKACFRLGYVNPFKDLVDEVQRLGVPVAPETWTACIYIASSRDFFR---LGIACLEKMVECGTIPDGKAFNQVMA-----C-------CEKKGRGEEAMHLFNFMRGHGIEAPPLTYWALASLLSCEGRWDDFKIVEENLRARDFPESIKERFYSTAVVARSGARDWQGALDMLRRMHECGAVPSIRGFTTALSTCMAAGAYQAVRDFVEEVRGWAIFDFDVATYNVVINSYASERNLEGASTWFEKIYEAGLRPSLISYSTIFKVCTSV---KRGD-LAKEYLERLVSEGDVHPNLITLNH---------AIQALAISRSHVEDARELLETMRDRFGVVPNATAYTFLLRAAGEKGDARLAMELYHRMKRVDGLVPEPRTIWEATIAC------TKSRFFA---PMEELADDLMALSADSPEGEDVXXXXXXXXXXXXXXXXXDLKYMGREGGRREGQAQGQGGYD-SVRSLLYAYNAVLTALEKNGDGKLALRVYAHMQAQ-GLHADPMAIARLLEALNKGKMPERGLKIWSELEGRRAEVRENVNITNAVLNAMSSVDPLT-AVEFFQDLREKGQVDDRSYTFAFAAYDNLGDVTGVRRLWSEMRTLGLAFDRVSYGSLLRALANAGEIDQA---MDGLRRSEEVGVPLNNYTVALTLIGCKRSRRWSTALSMLRELRDEKGLILNVVCYNSVLTVCNAAGQW 852
            E F  + +   E     +   LKAC  L  + P + +   V +LG   +    +A    A+ R F +   +    ++   +CG++ D  +  + MA     C       C + G  E A+ +F  M+  G      TY A+ +  +   + ++ K+V      ++    + ++ +  A      +  + G   ++    +CG++               A A++      E          DV ++  ++  Y      E A + FE +   G  P   S+      CTS+   + GD LAK     L    D+H +L   N          A+  +  +   +++AR + E +  R  V+ N+     L+      G+A L  EL+ +M R  G  P+ ++   A  AC       + +  +      E  + +MAL +++ +   +                  L                +  +D  +   + ++NA+++AL +N +G+LAL ++  MQ Q G   D   +   L A       + G +I +++   R  +  NV + N++++       ++ + + F+ + +   V   ++T   A Y   GD      L+ EM+  G+  DR++Y S+L A ++AG +++     + +R   ++ V   +Y   + L+G  R+     A+ +L+       +  NVV + + L  C   G+W
Sbjct:  239 EMFSQMVSRGCEPNSRTFVAALKACATLASLEPGELVDGRVLKLG---SLRKGSAIHSQAAKRGFDKDIFVASTLVDMYCKCGSLADATSVFRGMARRDVVCWTSLILGCAENGEEELALEMFYSMQSEGCSPNSRTYVAVLAACAGVAQKEEAKLVAGQY-LKEVTLEVGKKIHLDATKGGFQSDTFVGN-SLIGMYAKCGSL---------------ADAHKVFDRMPER---------DVVSWTALMLGYVECGEAEVAFSLFESMVSGGCVPDGRSFVAALMACTSLAEQEEGDKLAKVKSGALKRGMDIH-SLAARNRWDADIFVATALVDMYANSGSMDNARTVFEKVLHRDVVLWNS-----LMLGYVRNGEAELVFELFTKM-RSQGCPPDSQSFVAALTACGNLAERDEGKHVSGKVVKVECLEKVMALHSEAGKTGKLGDMFVANTLVDVYAKCGSL-------------LDCRAAFDRMLHHDVVSWNALMSALVENSEGQLALDLFTSMQQQSGFLPDSRTVVAALSACGCVVALQTGKQIQADI--CRCGLENNVLVANSLVDFYGRCGRISVSQQLFEAVTDPRSVS--AWTSLIAGYSRQGDAQKTIELFEEMQRQGMKGDRITYLSVLAACSHAGLVEKGKTYFEAMRADRDITVDAVHYACMVDLLG--RANYLDEAIVVLK-----SNIPSNVVAWTAFLGAC---GKW 902          
The following BLAST results are available for this feature:
BLAST of NO02G03880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30215.10.000e+066.51pentatricopeptide repeat-containing protein [Nanno... [more]
XP_005856229.12.900e-20369.87pentatricopeptide repeat-containing protein, parti... [more]
XP_005856234.12.600e-19163.36hypothetical protein NGA_2104200, partial [Nannoch... [more]
XP_010905005.15.800e-1820.62PREDICTED: pentatricopeptide repeat-containing pro... [more]
XP_009420355.12.300e-1422.36PREDICTED: pentatricopeptide repeat-containing pro... [more]
XP_021653376.13.000e-1420.93pentatricopeptide repeat-containing protein At5g27... [more]
OWM69147.16.700e-1421.91hypothetical protein CDL15_Pgr025334 [Punica grana... [more]
XP_021653412.16.700e-1420.93pentatricopeptide repeat-containing protein At5g27... [more]
XP_024518767.11.100e-1320.08pentatricopeptide repeat-containing protein At2g13... [more]
XP_024518766.11.100e-1320.08pentatricopeptide repeat-containing protein At4g39... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007048NSK007048Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G03880.1NO02G03880.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|562835gene_982Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100003g88gene382Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G03880.1NO02G03880.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G03880 ID=NO02G03880|Name=NO02G03880|organism=Nannochloropsis oceanica|type=gene|length=4118bp
AAAATAACAGAGGGTATAAAGCGGAGAGACGGCTACAACTTGGAACGTGC
TGCTTGCGGCTGCCCATTGCCCTTGACTAGCGGTAGCAGTAGTAAGACAC
GCGGCAGCCGTGTGTTTGGCGGTGGCGACCACCAGCATGCAGAGTAGCAG
CAGAAGAAGGAGACGGCCGCGGACAGAGGATGCCACGAGGCCACCGTCAC
CAATACTCCGGCACGCTTCCTCTTCGGCCCTACTCCAGCCCATCATCTTA
CTCGCACCCTTTCTCCTCCTGCAAGTTCTGTTGCTGCTCTTTCCTCATGC
CAATGCCTTTTTGCAGCCCCTCCTATCACCTTCTTCCTCCAGCTTTTCCT
CGTCTCTTTCCTTTTTAACTCCCACCACCTCAACCACATCCACCACCACC
CGATGGCGGCGATGGGCCGCTCTGTCCTCCTCCCCCGCCTCATCTCACCC
ACCTCATGCCACGACTCCCAGCGTCGCTGAAGATATGGAGCTACGAATCG
AAGCATCAGCGCCAACACCATCAGCAGTAGTAGACTACGGAGAAGAAGCT
GGTGCATCACTACCACCACCAGTCACTGCCCTCGTTGACAGCAAACAAGA
GCTTTTTGATGCCCTTCAAAGCCACACTGGCCGTAGAGAGGCATTTGAGG
GGCTGTGGAATTCCGACTTTGAATTCACGGAGGCGGAATACCAAGAATTA
CTGAAAGCGTGTTTTCGTTTGGGTTATGTTAATCCTTTCAAGGACTTGGT
GGACGAAGTGCAGAGGTTGGGGGTGCCTGTAGCGCCGGAGACATGGACAG
CTTGCATTTACATCGCGAGCTCCCGCGATTTTTTTAGGCTGGGTATTGCA
TGTTTGGAGAAGATGGTGGAGTGTGGGACGATCCCGGATGGGAAGGCTTT
CAATCAGGTGATGGCTTGTTGTGAGAAGAAGGGAAGGGGGGAAGAGGCGA
TGCATTTGTTTAACTTCATGCGTGGACATGGGATTGAGGCTCCTCCTTTA
ACGTACTGGGCGTTGGCTTCTCTGTTATCATGTGAGGGACGATGGGACGA
CTTCAAGATTGTGGAGGAGAATTTGAGAGCCAGGGATTTCCCAGAGAGTA
TCAAGGAGCGGTTCTACTCGACGGCAGTGGTGGCCAGGTCAGGGGCGAGG
GACTGGCAGGGTGCGTTGGACATGTTGAGACGGATGCATGAATGTGGAGC
GGTGCCCAGTATAAGGGGCTTTACGACCGCGCTGAGTACGTGCATGGCAG
CGGGGGCGTACCAAGCCGTCAGGGACTTTGTGGAGGAGGTAAGAGGATGG
GCCATCTTCGATTTCGACGTGGCTACGTATAACGTGGTCATTAATTCGTA
CGCGAGCGAACGGAACTTAGAGGGGGCATCAACGTGGTTTGAAAAGATAT
ATGAGGCGGGGTTGAGGCCGAGTTTGATCAGTTACAGTACCATCTTCAAG
GTATGTACGTCAGTGAAACGCGGGGATTTGGCCAAGGAATATCTAGAACG
GTTGGTGTCTGAGGGGGACGTACACCCGAATTTGATTACATTGAACCATG
CGATCCAAGCATTGGCGATCAGTCGTTCACACGTGGAGGACGCTCGGGAG
CTGTTGGAGACGATGAGGGACAGATTCGGGGTTGTGCCAAATGCGACTGC
GTATACTTTTTTGTTGAGGGCCGCAGGGGAAAAAGGGGACGCGAGACTCG
CGATGGAGCTTTACCATAGGATGAAGAGGGTGGATGGGCTGGTGCCTGAG
CCGAGGACGATTTGGGAGGCGACGATTGCATGTACCAAGAGTCGTTTTTT
TGCGCCTATGGAAGAGCTGGCGGATGACCTGATGGCATTGTCGGCGGACT
CGCCCGAGGGTGAGGATGTGCAACGGCAACAGCAACAGCAACAGCAGCAG
CAGCAGCAGCAGCAGGAAGGAGATTTGAAATACATGGGGAGGGAGGGAGG
GAGAAGAGAGGGGCAGGCGCAGGGGCAGGGGGGGTATGATTCGGTGAGGT
CCTTGTTGTACGCATATAATGCCGTTTTGACGGCTTTGGAGAAAAATGGG
GATGGAAAGCTAGCTTTGCGAGTATACGCTCATATGCAGGCCCAGGGGCT
GCATGCTGATCCGATGGCGATTGCTCGTTTGTTGGAAGCATTGAATAAAG
GGAAAATGCCTGAGAGAGGACTGAAGATTTGGTCGGAGTTGGAGGGGAGG
AGGGCGGAAGTACGCGAAAATGTGAACATAACTAATGCGGTTTTGAATGC
AATGTCGTCGGTGGACCCTTTGACTGCAGTGGAGTTTTTCCAAGACTTGA
GGGAAAAGGGACAGGTGGATGATAGGTCTTACACGTTTGCTTTTGCGGCC
TACGATAACTTGGGGGATGTGACGGGGGTCCGGAGGTTGTGGAGTGAGAT
GAGGACTTTGGGCCTGGCGTTCGACCGGGTGTCGTATGGGAGTTTATTGA
GGGCTTTGGCAAATGCAGGAGAGATTGATCAGGCTATGGATGGGTTGCGG
CGGTCGGAGGAGGTGGGGGTGCCCTTGAATAATTATACTGTGGCCTTGAC
CTTGATTGGATGTAAGAGGAGTAGGAGGTGGAGTACGGCTTTGAGCATGC
TGAGGGAGCTAAGGGATGAGAAGGGGCTCATCTTGAATGTCGTGTGTTAT
AACTCGGTGTTGACCGTGTGTAATGCCGCGGGGCAGTGGCGGGCTTGTCT
GAAGTTGCTGGACGAGATGAAGGAGCATGACATTAGCCCCGATTATACTT
CATTAAGAGTGACACTCAATGCCTTGGCGTCCGCGGGGAGGAATAATGAG
ATTGTGCGCCTGTATCGACTGCACGAACAGGAGGGAGGTGTCTTGTCACG
AAAACTGGATAATTTCGCGTTTCGGCTGGTTGCGAACGCTTTCATCAAAT
TTGACCCCGTGGAGGCCGTTGGAATGATTCAGAGCTACCTGACTACTTTC
GAAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGGCAGGGCGCTACTGGTGC
CTCCTCTTCCTCATCCTCACAGCCGTCCCGCCGCTACAACCAGCAGCACC
ACAAGGGCCCCACCGGTTCGCAACAGCAGCAGCAGCCAACATTGATCGAT
TCCCGGCTCTACAAGACGCTCATCACCGCATTGGGTCACAAGGGGGAGTG
GTCTCAAGCATTGGATGTTCTGAAGTCACTCCCTCCCCCCCTCCGGGATA
TTTCGACTGTTTCTGCTGCGGTAAGCGCCCTGCTGCGCTCCGAGCAATAT
ATCCGTGCGCGGGATTTGGTGGTGGAGGCCGAGGAGAGTAGCAGGAGCAG
CAAAAACATGCGTTTCGACAGCGTCGCGGACTCCTTGGGGCTGCAAGCCG
CGTACATGGCAAAAGATTTCCCTCAAGCACAGATCTACCTGGATAGGTTG
TCCAAAGAGGGGAGTCATGCCAACTCTAGTGTAAATTTTGGATTTTGCCT
ACTGGCGAAACAAGGGAAGTGGCTCGAGCTTGTGTCGTTGTTGAGTGAGA
TTGTGAAGATCCAGCAGCAGGGAGGAAAGGAGGGAAGGGGGGAGGGTGGG
AGGAAATTTGTTGTGAGTCGGACGACATTAGAGACTTTTGCGAATTTGAC
ATCAACGACGACGACAGGGGGTGATGAGGGAGGGGTGGTGGTGCAGCAGC
CCGAGCCAGCTGTATTGACCCAGATTGTTGAGATGCTAAGTAAAATGAAG
GGGCCTGACTGTGGCTTGGCGGTGCTTCCAGGAGGAAGAGGAGGAGGGGC
ACCAACATCAGAAGCAGCGGATGGAAAAGAAGATGATGGAATAGGAGGGG
AAGGGGTAAAACGGGCAGGATAAGCAGAGGGGCGGGAGTGTTCTTGATGG
TCTTTTGATGGCCAGTAGTACGTCACATTCTTTTTTACATCGCAATAACA
CCAAAGTAAGAAATAAGCAAGCATGTGTGTTACGAGAGGGAGGCGGAGGC
CAGCAGAGTAGAAGTAAGACCGCCCAAAATATGAAGAAATGCCACAAAGG
AAACAAGAAAAACGATATGCATCACATTAAAGTATGGCATGTTTTTCCTG
TGCGTAAAATCAAATCGACAAATAAGGGAGTGACGATGAAGGAGAAATTC
TTCATCTTTCTCCCTTTC
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protein sequence of NO02G03880.1

>NO02G03880.1-protein ID=NO02G03880.1-protein|Name=NO02G03880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1229bp
MQSSSRRRRRPRTEDATRPPSPILRHASSSALLQPIILLAPFLLLQVLLL
LFPHANAFLQPLLSPSSSSFSSSLSFLTPTTSTTSTTTRWRRWAALSSSP
ASSHPPHATTPSVAEDMELRIEASAPTPSAVVDYGEEAGASLPPPVTALV
DSKQELFDALQSHTGRREAFEGLWNSDFEFTEAEYQELLKACFRLGYVNP
FKDLVDEVQRLGVPVAPETWTACIYIASSRDFFRLGIACLEKMVECGTIP
DGKAFNQVMACCEKKGRGEEAMHLFNFMRGHGIEAPPLTYWALASLLSCE
GRWDDFKIVEENLRARDFPESIKERFYSTAVVARSGARDWQGALDMLRRM
HECGAVPSIRGFTTALSTCMAAGAYQAVRDFVEEVRGWAIFDFDVATYNV
VINSYASERNLEGASTWFEKIYEAGLRPSLISYSTIFKVCTSVKRGDLAK
EYLERLVSEGDVHPNLITLNHAIQALAISRSHVEDARELLETMRDRFGVV
PNATAYTFLLRAAGEKGDARLAMELYHRMKRVDGLVPEPRTIWEATIACT
KSRFFAPMEELADDLMALSADSPEGEDVQRQQQQQQQQQQQQQEGDLKYM
GREGGRREGQAQGQGGYDSVRSLLYAYNAVLTALEKNGDGKLALRVYAHM
QAQGLHADPMAIARLLEALNKGKMPERGLKIWSELEGRRAEVRENVNITN
AVLNAMSSVDPLTAVEFFQDLREKGQVDDRSYTFAFAAYDNLGDVTGVRR
LWSEMRTLGLAFDRVSYGSLLRALANAGEIDQAMDGLRRSEEVGVPLNNY
TVALTLIGCKRSRRWSTALSMLRELRDEKGLILNVVCYNSVLTVCNAAGQ
WRACLKLLDEMKEHDISPDYTSLRVTLNALASAGRNNEIVRLYRLHEQEG
GVLSRKLDNFAFRLVANAFIKFDPVEAVGMIQSYLTTFERGGGGGGGGGQ
GATGASSSSSSQPSRRYNQQHHKGPTGSQQQQQPTLIDSRLYKTLITALG
HKGEWSQALDVLKSLPPPLRDISTVSAAVSALLRSEQYIRARDLVVEAEE
SSRSSKNMRFDSVADSLGLQAAYMAKDFPQAQIYLDRLSKEGSHANSSVN
FGFCLLAKQGKWLELVSLLSEIVKIQQQGGKEGRGEGGRKFVVSRTTLET
FANLTSTTTTGGDEGGVVVQQPEPAVLTQIVEMLSKMKGPDCGLAVLPGG
RGGGAPTSEAADGKEDDGIGGEGVKRAG*
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Synonyms
Publications