NO02G03630, NO02G03630 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G03630 vs. NCBI_GenBank
Match: XP_005852522.1 (RNA-binding protein 25 [Nannochloropsis gaditana CCMP526] >EKU23310.1 RNA-binding protein 25 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 233.0 bits (593), Expect = 3.200e-57 Identity = 187/606 (30.86%), Postives = 253/606 (41.75%), Query Frame = 0 Query: 206 VGSEGGIVAPQPSSSAP----SRMQKDEPMTVFVGKLPPNVPDQFIFSLLEQCGRVLEWKRVEGKNFGFCLYARPAQARRCVNLMNGFKVDYQEIVTKVGKKEVAILAELEVSEEEAAQDKVAKERLQYVIQRRNLGARQGLAREEDTXXXXXXXXXXXXXXXXXXXXXXXXXXGEAEVGREEHNSRTGASLMVERMTLAAGLPPSPETVREGRAQNTVVLSEVERFRMVEAQRDRKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAVDVSADGDC---SSAAGTMSTIASRPLQVKSRGSW---------TIDLPAKSRGAGNIGKAKVSSRSRVATSVFQAGYEDEEERGTKLRXXXXXXXXXXDRHPEHSTSTENTSKGGPAPISGMLSERQKRLVREIPQDKDALFDYPVDWATVDAQNLVPVRLRAWVVKKIKELLGEEEPTLIDYICSKLLTHCRPDDLLAELRLVLEDDADIFTQKLWRIMIYYTIE 796 + G + A + SS+AP S +D+PMTVFVG+LPP VPD I++LLEQCG++LEWKR GK+FGFC YA+P+ ARRC+ LMNG K+D Q ++ K+ KE+A L EL VSE++AAQDK+ KERL +I++++L G + EE +G E +T S +++ A + +VL E++RFR EA+R R + XXXXX A G C G+ ++ L S GS T+D P R V S + TS + +E G + R + ++S + G L ERQ RLV +IPQD+ AL YPVDW VD +LV +LRAWV K+ ELLGEEE TLI++ICSKL +HC P+ LLAELRLV +D+AD+F +KLWRI+IYYTIE Sbjct: 68 IAENGRVHATECSSTAPVLVSSHSGEDDPMTVFVGRLPPTVPDHVIYTLLEQCGKILEWKRAMGKSFGFCQYAQPSYARRCLELMNGVKLDCQPVLVKLDNKELARLVELAVSEQDAAQDKITKERLTSIIEQQHLRVHVGEGEVRASAKRQRCKHG----------------------AEEEGGCGSGCGSRAELLTGGWDPSSSLSGMQKNTAHDLLVLGELDRFRTTEAERGRLQEKHRLLELRHRVEEXXXXXIRQKKRRNETAEFILREAKMKVPHSAAEETREISKSKARDGCE----------------------------------------------------------------------------------EASGCCCLNDEKIGSNDVTGAKLLTYHSHGSQCLQKRDCQRTVDFPGILREVDTCVMLDV-GESNMRTS-YDTKPPAADELGPLKKNTEQKQARNDQRWSKDASSNASRHCGANIRKFKPLCERQMRLVSKIPQDRKALLMYPVDWVAVDKNSLVSSKLRAWVASKVIELLGEEENTLIEFICSKLTSHCHPNKLLAELRLVFDDEADVFIEKLWRILIYYTIE 567
BLAST of NO02G03630 vs. NCBI_GenBank
Match: EWM30252.1 (rna-binding protein 25 [Nannochloropsis gaditana]) HSP 1 Score: 233.0 bits (593), Expect = 3.200e-57 Identity = 187/606 (30.86%), Postives = 253/606 (41.75%), Query Frame = 0 Query: 206 VGSEGGIVAPQPSSSAP----SRMQKDEPMTVFVGKLPPNVPDQFIFSLLEQCGRVLEWKRVEGKNFGFCLYARPAQARRCVNLMNGFKVDYQEIVTKVGKKEVAILAELEVSEEEAAQDKVAKERLQYVIQRRNLGARQGLAREEDTXXXXXXXXXXXXXXXXXXXXXXXXXXGEAEVGREEHNSRTGASLMVERMTLAAGLPPSPETVREGRAQNTVVLSEVERFRMVEAQRDRKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAVDVSADGDC---SSAAGTMSTIASRPLQVKSRGSW---------TIDLPAKSRGAGNIGKAKVSSRSRVATSVFQAGYEDEEERGTKLRXXXXXXXXXXDRHPEHSTSTENTSKGGPAPISGMLSERQKRLVREIPQDKDALFDYPVDWATVDAQNLVPVRLRAWVVKKIKELLGEEEPTLIDYICSKLLTHCRPDDLLAELRLVLEDDADIFTQKLWRIMIYYTIE 796 + G + A + SS+AP S +D+PMTVFVG+LPP VPD I++LLEQCG++LEWKR GK+FGFC YA+P+ ARRC+ LMNG K+D Q ++ K+ KE+A L EL VSE++AAQDK+ KERL +I++++L G + EE +G E +T S +++ A + +VL E++RFR EA+R R + XXXXX A G C G+ ++ L S GS T+D P R V S + TS + +E G + R + ++S + G L ERQ RLV +IPQD+ AL YPVDW VD +LV +LRAWV K+ ELLGEEE TLI++ICSKL +HC P+ LLAELRLV +D+AD+F +KLWRI+IYYTIE Sbjct: 68 IAENGRVHATECSSTAPVLVSSHSGEDDPMTVFVGRLPPTVPDHVIYTLLEQCGKILEWKRAVGKSFGFCQYAQPSYARRCLELMNGVKLDCQPVLVKLDNKELARLVELAVSEQDAAQDKITKERLTSIIEQQHLRVHVGEGEVRASAKRQRCKHG----------------------AEEEGGCGSGCGSRAELLTGGWDPSSSLSGMQKNTAHDLLVLGELDRFRTTEAERGRLQEKHRLLELRHRVEEXXXXXIRQKKRRNETAEFILREAKMKVPHSAAEETREISKSKARDGCE----------------------------------------------------------------------------------EASGCCCLNDEKIGSNDVTGAKLLTYHSHGSQCLQKRDCQRTVDFPGILREVDTCVMLDV-GESNMRTS-YDTKPPAADELGPLKKNTEQKQARNDQRWSKDASSNASRHCGANIRKFKPLCERQMRLVSKIPQDRKALLMYPVDWVAVDKNSLVSSKLRAWVASKVIELLGEEENTLIEFICSKLTSHCHPNKLLAELRLVFDDEADVFIEKLWRILIYYTIE 567
BLAST of NO02G03630 vs. NCBI_GenBank
Match: XP_002117245.1 (hypothetical protein TRIADDRAFT_61221 [Trichoplax adhaerens] >EDV20295.1 hypothetical protein TRIADDRAFT_61221 [Trichoplax adhaerens]) HSP 1 Score: 117.5 bits (293), Expect = 1.900e-22 Identity = 51/104 (49.04%), Postives = 78/104 (75.00%), Query Frame = 0 Query: 695 RQKRLVREIPQDKDALFDYPVDWATVDAQNLVPVRLRAWVVKKIKELLGEEEPTLIDYICSKLLTHCRPDDLLAELRLVLEDDADIFTQKLWRIMIYYTIESRK 799 R K ++ IP DK+ LFDYP++W+ VD ++L+ R+R WV+KKI E +GEEEPTL+D+IC K+ H P ++ +L +VL+D+A++F KLWR++IY T E++K Sbjct: 591 RIKAIMESIPSDKEKLFDYPLNWSLVD-ESLIEKRMRTWVIKKITEYIGEEEPTLVDFICEKVKEHNSPVSIVKDLEMVLDDEAEVFVMKLWRLLIYET-EAKK 692
BLAST of NO02G03630 vs. NCBI_GenBank
Match: XP_016109622.1 (PREDICTED: RNA-binding protein 25-like [Sinocyclocheilus grahami]) HSP 1 Score: 116.3 bits (290), Expect = 4.300e-22 Identity = 68/197 (34.52%), Postives = 112/197 (56.85%), Query Frame = 0 Query: 603 PLQVKSRGSWTIDLPAKSRGAGNIGKAKVSSRSRVAT-SVFQAGYEDEEERGTKLRXXXXXXXXXXDRHPEHSTSTENTSKGGPAPISGMLSERQKRLVREIPQDKDALFDYPVDWATVDAQNLVPVRLRAWVVKKIKELLGEEEPTLIDYICSKLLTHCRPDDLLAELRLVLEDDADIFTQKLWRIMIYYTIESRK 799 PLQ ++R I L K AG+ G+ V+ R ++A SVF +DE + + R D E + + + GG + + K L+ +IP K LF+YP+DW+ VD L+ R+R W+ KKI E +GEEE TL+D++C+K++ H P +L ++ +VL+++A++F K+WR++IY T E++K Sbjct: 532 PLQEENRPK--IGLSLKLGSAGSPGQPSVAKRKKLAVESVFNRFDDDEVDEAPRKR-----KLVPLDYEDEEKGADVSAAAGGKGVNTEEKRKHIKSLIEKIPTAKPELFNYPLDWSVVDT-TLMEKRIRPWINKKIVEYIGEEEATLVDFVCTKVMAHSTPQGILDDVAMVLDEEAEVFIVKMWRLLIYET-EAKK 719
BLAST of NO02G03630 vs. NCBI_GenBank
Match: XP_016362377.1 (PREDICTED: RNA-binding protein 25-like isoform X1 [Sinocyclocheilus anshuiensis]) HSP 1 Score: 116.3 bits (290), Expect = 4.300e-22 Identity = 68/197 (34.52%), Postives = 112/197 (56.85%), Query Frame = 0 Query: 603 PLQVKSRGSWTIDLPAKSRGAGNIGKAKVSSRSRVAT-SVFQAGYEDEEERGTKLRXXXXXXXXXXDRHPEHSTSTENTSKGGPAPISGMLSERQKRLVREIPQDKDALFDYPVDWATVDAQNLVPVRLRAWVVKKIKELLGEEEPTLIDYICSKLLTHCRPDDLLAELRLVLEDDADIFTQKLWRIMIYYTIESRK 799 PLQ ++R I L K AG+ G+ V+ R ++A SVF +DE + + R D E + + + GG + + K L+ +IP K LF+YP+DW+ VD L+ R+R W+ KKI E +GEEE TL+D++C+K++ H P +L ++ +VL+++A++F K+WR++IY T E++K Sbjct: 652 PLQEENRPK--IGLSLKLGSAGSPGQPSVAKRKKLAVESVFNRFDDDEVDEAPRKR-----KLVPLDYEDEEKGADVSAAAGGKGVNTEEKRKHIKSLIEKIPTAKPELFNYPLDWSVVDT-TLMEKRIRPWINKKIVEYIGEEEATLVDFVCTKVMAHSTPQGILDDVAMVLDEEAEVFIVKMWRLLIYET-EAKK 839
BLAST of NO02G03630 vs. NCBI_GenBank
Match: XP_016362378.1 (PREDICTED: RNA-binding protein 25-like isoform X2 [Sinocyclocheilus anshuiensis]) HSP 1 Score: 116.3 bits (290), Expect = 4.300e-22 Identity = 68/197 (34.52%), Postives = 112/197 (56.85%), Query Frame = 0 Query: 603 PLQVKSRGSWTIDLPAKSRGAGNIGKAKVSSRSRVAT-SVFQAGYEDEEERGTKLRXXXXXXXXXXDRHPEHSTSTENTSKGGPAPISGMLSERQKRLVREIPQDKDALFDYPVDWATVDAQNLVPVRLRAWVVKKIKELLGEEEPTLIDYICSKLLTHCRPDDLLAELRLVLEDDADIFTQKLWRIMIYYTIESRK 799 PLQ ++R I L K AG+ G+ V+ R ++A SVF +DE + + R D E + + + GG + + K L+ +IP K LF+YP+DW+ VD L+ R+R W+ KKI E +GEEE TL+D++C+K++ H P +L ++ +VL+++A++F K+WR++IY T E++K Sbjct: 639 PLQEENRPK--IGLSLKLGSAGSPGQPSVAKRKKLAVESVFNRFDDDEVDEAPRKR-----KLVPLDYEDEEKGADVSAAAGGKGVNTEEKRKHIKSLIEKIPTAKPELFNYPLDWSVVDT-TLMEKRIRPWINKKIVEYIGEEEATLVDFVCTKVMAHSTPQGILDDVAMVLDEEAEVFIVKMWRLLIYET-EAKK 826
BLAST of NO02G03630 vs. NCBI_GenBank
Match: XP_016362379.1 (PREDICTED: RNA-binding protein 25-like isoform X3 [Sinocyclocheilus anshuiensis]) HSP 1 Score: 116.3 bits (290), Expect = 4.300e-22 Identity = 68/197 (34.52%), Postives = 112/197 (56.85%), Query Frame = 0 Query: 603 PLQVKSRGSWTIDLPAKSRGAGNIGKAKVSSRSRVAT-SVFQAGYEDEEERGTKLRXXXXXXXXXXDRHPEHSTSTENTSKGGPAPISGMLSERQKRLVREIPQDKDALFDYPVDWATVDAQNLVPVRLRAWVVKKIKELLGEEEPTLIDYICSKLLTHCRPDDLLAELRLVLEDDADIFTQKLWRIMIYYTIESRK 799 PLQ ++R I L K AG+ G+ V+ R ++A SVF +DE + + R D E + + + GG + + K L+ +IP K LF+YP+DW+ VD L+ R+R W+ KKI E +GEEE TL+D++C+K++ H P +L ++ +VL+++A++F K+WR++IY T E++K Sbjct: 626 PLQEENRPK--IGLSLKLGSAGSPGQPSVAKRKKLAVESVFNRFDDDEVDEAPRKR-----KLVPLDYEDEEKGADVSAAAGGKGVNTEEKRKHIKSLIEKIPTAKPELFNYPLDWSVVDT-TLMEKRIRPWINKKIVEYIGEEEATLVDFVCTKVMAHSTPQGILDDVAMVLDEEAEVFIVKMWRLLIYET-EAKK 813
BLAST of NO02G03630 vs. NCBI_GenBank
Match: XP_016362380.1 (PREDICTED: RNA-binding protein 25-like isoform X4 [Sinocyclocheilus anshuiensis]) HSP 1 Score: 116.3 bits (290), Expect = 4.300e-22 Identity = 68/197 (34.52%), Postives = 112/197 (56.85%), Query Frame = 0 Query: 603 PLQVKSRGSWTIDLPAKSRGAGNIGKAKVSSRSRVAT-SVFQAGYEDEEERGTKLRXXXXXXXXXXDRHPEHSTSTENTSKGGPAPISGMLSERQKRLVREIPQDKDALFDYPVDWATVDAQNLVPVRLRAWVVKKIKELLGEEEPTLIDYICSKLLTHCRPDDLLAELRLVLEDDADIFTQKLWRIMIYYTIESRK 799 PLQ ++R I L K AG+ G+ V+ R ++A SVF +DE + + R D E + + + GG + + K L+ +IP K LF+YP+DW+ VD L+ R+R W+ KKI E +GEEE TL+D++C+K++ H P +L ++ +VL+++A++F K+WR++IY T E++K Sbjct: 613 PLQEENRPK--IGLSLKLGSAGSPGQPSVAKRKKLAVESVFNRFDDDEVDEAPRKR-----KLVPLDYEDEEKGADVSAAAGGKGVNTEEKRKHIKSLIEKIPTAKPELFNYPLDWSVVDT-TLMEKRIRPWINKKIVEYIGEEEATLVDFVCTKVMAHSTPQGILDDVAMVLDEEAEVFIVKMWRLLIYET-EAKK 800
BLAST of NO02G03630 vs. NCBI_GenBank
Match: XP_016399318.1 (PREDICTED: RNA-binding protein 25-like [Sinocyclocheilus rhinocerous]) HSP 1 Score: 116.3 bits (290), Expect = 4.300e-22 Identity = 68/197 (34.52%), Postives = 112/197 (56.85%), Query Frame = 0 Query: 603 PLQVKSRGSWTIDLPAKSRGAGNIGKAKVSSRSRVAT-SVFQAGYEDEEERGTKLRXXXXXXXXXXDRHPEHSTSTENTSKGGPAPISGMLSERQKRLVREIPQDKDALFDYPVDWATVDAQNLVPVRLRAWVVKKIKELLGEEEPTLIDYICSKLLTHCRPDDLLAELRLVLEDDADIFTQKLWRIMIYYTIESRK 799 PLQ ++R I L K AG+ G+ V+ R ++A SVF +DE + + R D E + + + GG + + K L+ +IP K LF+YP+DW+ VD L+ R+R W+ KKI E +GEEE TL+D++C+K++ H P +L ++ +VL+++A++F K+WR++IY T E++K Sbjct: 579 PLQEENRPK--IGLSLKLGSAGSPGQPSVAKRKKLAVESVFNRFDDDEVDEAPRKR-----KLVPLDYEDEEKGADVSAAAGGKGVNTEEKRKHIKSLIEKIPTAKPELFNYPLDWSVVDT-TLMEKRIRPWINKKIVEYIGEEEATLVDFVCTKVMAHSTPQGILDDVAMVLDEEAEVFIVKMWRLLIYET-EAKK 766
BLAST of NO02G03630 vs. NCBI_GenBank
Match: XP_002131684.1 (PREDICTED: RNA-binding protein 25-like [Ciona intestinalis]) HSP 1 Score: 113.6 bits (283), Expect = 2.800e-21 Identity = 48/103 (46.60%), Postives = 77/103 (74.76%), Query Frame = 0 Query: 697 KRLVREIPQDKDALFDYPVDWATVDAQNLVPVRLRAWVVKKIKELLGEEEPTLIDYICSKLLTHCRPDDLLAELRLVLEDDADIFTQKLWRIMIYYTIESRKD 800 + L+ IP KD LFDY +DW+ VD+ L+ R++ W+ KKI E +GEEEPTL+++ICSK++T PD +L ++ +VL+D+A++F K+WR++IY T E++K+ Sbjct: 759 RALIERIPTKKDDLFDYTLDWSMVDS-TLMEKRIQPWITKKIMEYIGEEEPTLVEFICSKIMTKSNPDKILEDISMVLDDEAEVFVVKMWRLLIYET-EAKKE 859 The following BLAST results are available for this feature:
BLAST of NO02G03630 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G03630 ID=NO02G03630|Name=NO02G03630|organism=Nannochloropsis oceanica|type=gene|length=2866bpback to top protein sequence of NO02G03630.1 >NO02G03630.1-protein ID=NO02G03630.1-protein|Name=NO02G03630.1|organism=Nannochloropsis oceanica|type=polypeptide|length=800bpback to top Synonyms
Publications
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