NO02G03330, NO02G03330 (gene) Nannochloropsis oceanica

Overview
NameNO02G03330
Unique NameNO02G03330
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length993
Alignment locationchr2:895208..896200 -

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Properties
Property NameValue
DescriptionInosine triphosphate pyrophosphatase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:895208..896200 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0047429nucleoside-triphosphate diphosphatase activity
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0009143nucleoside triphosphate catabolic process
GO:0009058biosynthetic process
GO:0009056catabolic process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR029001ITPase-like_fam
IPR002637Ham1p-like
Homology
BLAST of NO02G03330 vs. NCBI_GenBank
Match: XP_022722869.1 (inosine triphosphate pyrophosphatase [Durio zibethinus] >XP_022722870.1 inosine triphosphate pyrophosphatase [Durio zibethinus] >XP_022722871.1 inosine triphosphate pyrophosphatase [Durio zibethinus])

HSP 1 Score: 172.9 bits (437), Expect = 1.300e-39
Identity = 90/185 (48.65%), Postives = 119/185 (64.32%), Query Frame = 0
Query:   76 IKFITSNPLKTREVQALLAEGGLRVPFDIQTLDIQLPELQESPLVIAIEKTRLASNRVKAPCLVEDTSLCLNALGGLPGPYIKHFLDELGSAGLFKMVEAYEDRSARAICNVGFSPGPGQQPVIFTGITYGEIVLPEEDDNGFGWDTCFRPSGFTTTFSKMTVNEKNAISHRSLALRQFQQYIAD 261
            + F+T N  K  EV+A+L   G  +PF  Q+L + LPELQ  P  I+ EK RLA+ +V  P LVEDT LC NAL GLPGPYIK FL+++G  GL  ++ AYED+SA A+C   F+ GP  +P+ F G T G+IV P    N FGWD  F+P G+  T+++M   EKN ISHRS AL   + + A+
Sbjct:   15 VTFVTGNAKKLEEVKAIL---GQSIPF--QSLKLDLPELQGEPQEISKEKARLAALQVNGPVLVEDTCLCFNALNGLPGPYIKWFLEKIGHEGLNNLLMAYEDKSAYALCAFSFALGPDVEPITFLGKTPGKIV-PARGPNDFGWDPIFKPDGYDQTYAEMPKEEKNKISHRSRALDMVKSHFAE 193          
BLAST of NO02G03330 vs. NCBI_GenBank
Match: XP_024191907.1 (inosine triphosphate pyrophosphatase [Rosa chinensis] >PRQ36928.1 putative nucleotide diphosphatase [Rosa chinensis])

HSP 1 Score: 172.6 bits (436), Expect = 1.700e-39
Identity = 90/185 (48.65%), Postives = 120/185 (64.86%), Query Frame = 0
Query:   76 IKFITSNPLKTREVQALLAEGGLRVPFDIQTLDIQLPELQESPLVIAIEKTRLASNRVKAPCLVEDTSLCLNALGGLPGPYIKHFLDELGSAGLFKMVEAYEDRSARAICNVGFSPGPGQQPVIFTGITYGEIVLPEEDDNGFGWDTCFRPSGFTTTFSKMTVNEKNAISHRSLALRQFQQYIAD 261
            + F+T N  K  EV+A+L   G  +PF+  +L + LPELQ  P  I+ EK RLA+ +V  P LVEDT LC NAL GLPGPYIK FL ++G  GL  M+ AYED+SA A+C+  F+ GP  +P+ F G T G+IV P    N FGWD  F+P G+  T+++M+  EKN ISHRS AL   + + A+
Sbjct:   17 VTFVTGNAKKLEEVRAIL---GTSIPFN--SLKLDLPELQGEPEDISKEKARLAAVQVNGPVLVEDTCLCFNALKGLPGPYIKWFLQKVGHEGLNNMLMAYEDKSAYALCSFSFAIGPNAEPIAFLGKTPGKIV-PARGPNDFGWDPIFQPDGYEQTYAEMSKEEKNKISHRSRALALVKSHFAE 195          
BLAST of NO02G03330 vs. NCBI_GenBank
Match: XP_006487596.1 (PREDICTED: inosine triphosphate pyrophosphatase [Citrus sinensis])

HSP 1 Score: 172.2 bits (435), Expect = 2.300e-39
Identity = 90/185 (48.65%), Postives = 119/185 (64.32%), Query Frame = 0
Query:   76 IKFITSNPLKTREVQALLAEGGLRVPFDIQTLDIQLPELQESPLVIAIEKTRLASNRVKAPCLVEDTSLCLNALGGLPGPYIKHFLDELGSAGLFKMVEAYEDRSARAICNVGFSPGPGQQPVIFTGITYGEIVLPEEDDNGFGWDTCFRPSGFTTTFSKMTVNEKNAISHRSLALRQFQQYIAD 261
            + F+T N  K  EV+A+L   G  +PF  Q+L + LPELQ  P  I+ EK RLA+ +V  P LVEDT LC NAL GLPGPYIK FL ++G  GL  ++ AYED+SA A+C   F+ GP  +P+ F G T G+IV P    N FGWD  F+P+G+  T+++M   EKN ISHRS AL   + + A+
Sbjct:   16 VTFVTGNAKKLEEVKAIL---GQSIPF--QSLKLDLPELQGEPEDISKEKARLAAIQVNGPVLVEDTCLCFNALKGLPGPYIKWFLQKIGHEGLNNLLMAYEDKSAYALCGFAFALGPNIEPITFLGKTPGKIV-PARGPNDFGWDPIFQPNGYDQTYAEMAKEEKNKISHRSKALAMVKSHFAE 194          
BLAST of NO02G03330 vs. NCBI_GenBank
Match: XP_023214807.1 (inosine triphosphate pyrophosphatase-like [Centruroides sculpturatus])

HSP 1 Score: 172.2 bits (435), Expect = 2.300e-39
Identity = 86/180 (47.78%), Postives = 118/180 (65.56%), Query Frame = 0
Query:   78 FITSNPLKTREVQALLAEGGLRVPFDIQTLDIQLPELQESPLVIAIEKTRLASNRVKAPCLVEDTSLCLNALGGLPGPYIKHFLDELGSAGLFKMVEAYEDRSARAICNVGFSPGPGQQPVIFTGITYGEIVLPEEDDNGFGWDTCFRPSGFTTTFSKMTVNEKNAISHRSLALRQFQQY 258
            F TSN  K  EV A+L   G   PF I+  +I LPE Q  P  I I K + A+   ++P ++EDT LC NALGGLPGPYIK FLD+LG  GL +++E ++D++A AIC   FS GP ++ ++F G T GEIV P    +GFGWD CF P G++ T+ +M+  +KN+ISHR  AL++ + Y
Sbjct:    7 FATSNKKKLEEVIAVL---GKSFPFQIENQNIDLPEYQGEPNDICIAKCKEAACITQSPVIIEDTCLCFNALGGLPGPYIKWFLDKLGPEGLHRLLEGWKDKTAYAICTFAFSEGPNEKVLLFQGQTDGEIVYP-RGASGFGWDPCFLPCGYSQTYGEMSAEQKNSISHRFKALQELKSY 182          
BLAST of NO02G03330 vs. NCBI_GenBank
Match: XP_023767329.1 (inosine triphosphate pyrophosphatase [Lactuca sativa] >PLY82839.1 hypothetical protein LSAT_0X4860 [Lactuca sativa])

HSP 1 Score: 172.2 bits (435), Expect = 2.300e-39
Identity = 95/202 (47.03%), Postives = 124/202 (61.39%), Query Frame = 0
Query:   59 LACSTPTAASYSQKRAVIKFITSNPLKTREVQALLAEGGLRVPFDIQTLDIQLPELQESPLVIAIEKTRLASNRVKAPCLVEDTSLCLNALGGLPGPYIKHFLDELGSAGLFKMVEAYEDRSARAICNVGFSPGPGQQPVIFTGITYGEIVLPEEDDNGFGWDTCFRPSGFTTTFSKMTVNEKNAISHRSLALRQFQQYIAD 261
            +A +   A +   K   + F+T N  K  EV+ +L   G  +PF  Q+L + LPELQ  P  IA EK RLA+N+VK P LVEDT LC NAL GLPGPYIK FL +LG  GL  M+ AY+D+SA A+C    + GP  +P+ F G T G+IV P    N FGWD  F+P G+  T+++M   EKN ISHRS AL   + + A+
Sbjct:    1 MAAARLAAGTGLVKLPPVTFVTGNAKKLEEVKVIL---GQSIPF--QSLKLDLPELQGDPEDIAKEKARLAANQVKGPVLVEDTCLCFNALKGLPGPYIKWFLQKLGHEGLNNMLMAYDDKSAYALCIFSLAIGPDFEPITFVGKTMGKIV-PARGPNDFGWDPVFQPDGYDQTYAEMPKEEKNKISHRSRALALVKSHFAE 196          
BLAST of NO02G03330 vs. NCBI_GenBank
Match: XP_006420565.1 (inosine triphosphate pyrophosphatase [Citrus clementina] >ESR33805.1 hypothetical protein CICLE_v10005905mg [Citrus clementina] >KDO55841.1 hypothetical protein CISIN_1g028718mg [Citrus sinensis] >GAY50404.1 hypothetical protein CUMW_126360 [Citrus unshiu])

HSP 1 Score: 171.8 bits (434), Expect = 3.000e-39
Identity = 90/185 (48.65%), Postives = 118/185 (63.78%), Query Frame = 0
Query:   76 IKFITSNPLKTREVQALLAEGGLRVPFDIQTLDIQLPELQESPLVIAIEKTRLASNRVKAPCLVEDTSLCLNALGGLPGPYIKHFLDELGSAGLFKMVEAYEDRSARAICNVGFSPGPGQQPVIFTGITYGEIVLPEEDDNGFGWDTCFRPSGFTTTFSKMTVNEKNAISHRSLALRQFQQYIAD 261
            + F+T N  K  EV+A+L   G  +PF  Q+L + LPELQ  P  I+ EK RLA+ +V  P LVEDT LC NAL GLPGPYIK FL ++G  GL  ++ AYED+SA A+C   F+ GP  +P+ F G T G+IV P    N FGWD  F+P G+  T+++M   EKN ISHRS AL   + + A+
Sbjct:   16 VTFVTGNAKKLEEVKAIL---GQSIPF--QSLKLDLPELQGEPEDISKEKARLAAIQVNGPVLVEDTCLCFNALKGLPGPYIKWFLQKIGHEGLNNLLMAYEDKSAYALCGFAFALGPNIEPITFLGKTPGKIV-PARGPNDFGWDPIFQPDGYDQTYAEMAKEEKNKISHRSKALAMVKSHFAE 194          
BLAST of NO02G03330 vs. NCBI_GenBank
Match: XP_002600198.1 (hypothetical protein BRAFLDRAFT_276410 [Branchiostoma floridae] >EEN56210.1 hypothetical protein BRAFLDRAFT_276410 [Branchiostoma floridae])

HSP 1 Score: 171.8 bits (434), Expect = 3.000e-39
Identity = 85/183 (46.45%), Postives = 117/183 (63.93%), Query Frame = 0
Query:   76 IKFITSNPLKTREVQALLAEGGLRVPFDIQTLDIQLPELQESPLVIAIEKTRLASNRVKAPCLVEDTSLCLNALGGLPGPYIKHFLDELGSAGLFKMVEAYEDRSARAICNVGFSPG-PGQQPVIFTGITYGEIVLPEEDDNGFGWDTCFRPSGFTTTFSKMTVNEKNAISHRSLALRQFQQY 258
            I F+T N  K  EV+ +L  G    P+++    + LPE Q  P  I+  K R A+ +++ PC+VEDT LC NALGGLPGPYIK FL++LG  GL++M+  +ED+SA A+C + FSPG P    ++F GI+ G+IV P      FGWD CF+P GF  T+ +M   EK+ ISHR  A+R  Q+Y
Sbjct:    8 IVFVTGNAKKLEEVKQILGAG---FPYEVVAKKVDLPEYQGEPDDISRAKAREAAKQIQGPCVVEDTCLCFNALGGLPGPYIKWFLEKLGPEGLYRMLTGWEDKSAYAMCTMAFSPGNPQDDVLLFKGISPGKIVDP-RGSRDFGWDPCFQPDGFEKTYGEMAKEEKHEISHRGRAVRAMQEY 186          
BLAST of NO02G03330 vs. NCBI_GenBank
Match: XP_013467222.1 (inosine triphosphate pyrophosphatase [Medicago truncatula] >ACJ86046.1 unknown [Medicago truncatula] >AFK47157.1 unknown [Medicago truncatula] >KEH41256.1 inosine triphosphate pyrophosphatase [Medicago truncatula])

HSP 1 Score: 171.8 bits (434), Expect = 3.000e-39
Identity = 89/185 (48.11%), Postives = 121/185 (65.41%), Query Frame = 0
Query:   76 IKFITSNPLKTREVQALLAEGGLRVPFDIQTLDIQLPELQESPLVIAIEKTRLASNRVKAPCLVEDTSLCLNALGGLPGPYIKHFLDELGSAGLFKMVEAYEDRSARAICNVGFSPGPGQQPVIFTGITYGEIVLPEEDDNGFGWDTCFRPSGFTTTFSKMTVNEKNAISHRSLALRQFQQYIAD 261
            + F+T N  K  EV+A+L   G  +PF  Q+L + LPELQ  P  I+ EK RLA+ +VK P LVEDT LC NAL GLPGPYIK FL ++G  GL  ++ AY+D+SA A+C   F+ GP  +P+ F+G T G+IV P    N FGWD  F+P G+  T+++M+  EKN ISHRS +L   + + A+
Sbjct:   17 VTFVTGNAKKLEEVRAIL---GHSIPF--QSLKLDLPELQGEPEDISKEKARLAAIQVKGPVLVEDTCLCFNALKGLPGPYIKWFLQKIGHEGLNNLLMAYDDKSAYALCVFSFAIGPDSEPITFSGKTLGKIV-PPRGPNDFGWDPVFQPDGYDQTYAEMSKEEKNKISHRSKSLALVKSHFAE 195          
BLAST of NO02G03330 vs. NCBI_GenBank
Match: XP_002464528.1 (inosine triphosphate pyrophosphatase [Sorghum bicolor] >C5WZH0.1 RecName: Full=Inosine triphosphate pyrophosphatase; Short=ITPase; Short=Inosine triphosphatase; AltName: Full=Non-canonical purine NTP pyrophosphatase; AltName: Full=Non-standard purine NTP pyrophosphatase; AltName: Full=Nucleoside-triphosphate diphosphatase; AltName: Full=Nucleoside-triphosphate pyrophosphatase; Short=NTPase >EER91526.1 hypothetical protein SORBI_3001G230200 [Sorghum bicolor])

HSP 1 Score: 171.4 bits (433), Expect = 3.900e-39
Identity = 88/184 (47.83%), Postives = 121/184 (65.76%), Query Frame = 0
Query:   76 IKFITSNPLKTREVQALLAEGGLRVPFDIQTLDIQLPELQESPLVIAIEKTRLASNRVKAPCLVEDTSLCLNALGGLPGPYIKHFLDELGSAGLFKMVEAYEDRSARAICNVGFSPGPGQQPVIFTGITYGEIVLPEEDDNGFGWDTCFRPSGFTTTFSKMTVNEKNAISHRSLALRQFQQYIA 260
            + F+T N  K  EV+A+L   G  +PF  Q+L + LPELQ  P  I+ EK R+A+++V  P LVEDT LC NAL GLPGPYIK FL+++G  GL  +++AYED+SA A+C    + GPG++P+ F G T G+IV P    N FGWD  F+P GF  T+++M  + KN ISHR  AL   +++ A
Sbjct:   12 VTFVTGNAKKLEEVRAIL---GSSIPF--QSLKLDLPELQGEPEDISKEKARMAASQVNGPVLVEDTCLCFNALKGLPGPYIKWFLEKIGHEGLNNLLKAYEDKSAFAMCIFSLALGPGEEPITFVGKTAGKIV-PARGPNDFGWDPVFQPDGFEQTYAEMPKSVKNEISHRGKALALVKEHFA 189          
BLAST of NO02G03330 vs. NCBI_GenBank
Match: XP_012842913.1 (PREDICTED: inosine triphosphate pyrophosphatase [Erythranthe guttata] >EYU32620.1 hypothetical protein MIMGU_mgv1a014025mg [Erythranthe guttata])

HSP 1 Score: 171.4 bits (433), Expect = 3.900e-39
Identity = 90/185 (48.65%), Postives = 117/185 (63.24%), Query Frame = 0
Query:   76 IKFITSNPLKTREVQALLAEGGLRVPFDIQTLDIQLPELQESPLVIAIEKTRLASNRVKAPCLVEDTSLCLNALGGLPGPYIKHFLDELGSAGLFKMVEAYEDRSARAICNVGFSPGPGQQPVIFTGITYGEIVLPEEDDNGFGWDTCFRPSGFTTTFSKMTVNEKNAISHRSLALRQFQQYIAD 261
            + F+T N  K  EV+A+L   G  +PF  ++L + LPELQ  P  I+ EK RLA+  V  P LVEDT LC NAL GLPGPYIK FL++LG  GL  ++ AYED+SA A+C    + GP   P+ F G T G+IVLP    N FGWD  F+P G+  T+++M   EKN ISHR  AL Q + + A+
Sbjct:   16 VTFVTGNAKKLEEVRAIL---GNSIPF--RSLKLDLPELQGEPEEISREKARLAAKEVNGPVLVEDTCLCFNALKGLPGPYIKWFLEKLGHQGLNNLLMAYEDKSAYALCVFSLALGPNADPITFLGKTPGKIVLP-RGPNDFGWDPIFQPDGYDQTYAEMAKEEKNTISHRYRALAQVKSHFAE 194          
The following BLAST results are available for this feature:
BLAST of NO02G03330 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_022722869.11.300e-3948.65inosine triphosphate pyrophosphatase [Durio zibeth... [more]
XP_024191907.11.700e-3948.65inosine triphosphate pyrophosphatase [Rosa chinens... [more]
XP_006487596.12.300e-3948.65PREDICTED: inosine triphosphate pyrophosphatase [C... [more]
XP_023214807.12.300e-3947.78inosine triphosphate pyrophosphatase-like [Centrur... [more]
XP_023767329.12.300e-3947.03inosine triphosphate pyrophosphatase [Lactuca sati... [more]
XP_006420565.13.000e-3948.65inosine triphosphate pyrophosphatase [Citrus cleme... [more]
XP_002600198.13.000e-3946.45hypothetical protein BRAFLDRAFT_276410 [Branchiost... [more]
XP_013467222.13.000e-3948.11inosine triphosphate pyrophosphatase [Medicago tru... [more]
XP_002464528.13.900e-3947.83inosine triphosphate pyrophosphatase [Sorghum bico... [more]
XP_012842913.13.900e-3948.65PREDICTED: inosine triphosphate pyrophosphatase [E... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006984NSK006984Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G03330.1NO02G03330.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|574653gene_921Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100003g149gene334Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G03330.1NO02G03330.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G03330 ID=NO02G03330|Name=NO02G03330|organism=Nannochloropsis oceanica|type=gene|length=993bp
ATGGGGGGGGCGCAAGGCATCCCACGGGCGTTGGCACCAGTGGTGCTGCT
TTCATTCTGCGTAATTGCACCTTCTTGGGCATTTGTTCGACCCGTTCCCG
CCAGATGCACACTTTCTTCCTCTCTTTCCGGCCACACCATAATCGCAAGT
GCCACCCACGTTCCTGGAAGCACACTGGCATGCTCAACGCCTACGGCAGC
CAGCTACAGTCAAAAAAGGGCAGTTATAAAATTCATTACGAGCAATCCTC
TTAAAACGCGTGAAGTGCAAGCCCTATTGGCGGAAGGAGGTCTTCGAGTG
CCCTTCGACATTCAGACTCTTGATATACAGCTGCCTGAGCTGCAAGAGTC
TCCGCTGGTGATTGCAATTGAAAAGACTCGGCTAGCCTCAAACAGAGTAA
AGgtaagctttttcatttcctcgccaccaactcacttctgcttccttcca
gtaagtcacttcttacctgtcccttccctttgacacgtacagGCGCCATG
CCTTGTAGAGGACACCTCGTTGTGCCTCAACGCACTCGGCGGGTTACCAG
GACCATACATCAAGCACTTCTTGGATGAGTTGGGAAGCGCGGGATTGTTT
AAGgtatgcttttcaacatgtattcgtggaggagaggttgacccacatca
tctaccttccctcctcctgtacctcccccagATGGTGGAAGCTTACGAAG
ACCGCTCCGCCAGGGCCATCTGCAACGTCGGGTTTTCTCCCGGTCCAGGG
CAGCAGCCCGTAATTTTTACTGGTATCACATACGGCGAAATTGTTCTCCC
GGAAGAGGACGACAACGGGTTTGGATGGGATACTTGCTTTCGTCCTTCTG
GGTTCACCACCACTTTCTCGAAGATGACGGTCAATGAGAAGAATGCCATT
TCTCACCGCAGTTTGGCGTTGCGCCAATTCCAACAATACATAGCAGATAA
TTGGGGCGAGGGAGGATTTGATGAAAGGGGTGTATTCAAGTAG
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protein sequence of NO02G03330.1

>NO02G03330.1-protein ID=NO02G03330.1-protein|Name=NO02G03330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=275bp
MGGAQGIPRALAPVVLLSFCVIAPSWAFVRPVPARCTLSSSLSGHTIIAS
ATHVPGSTLACSTPTAASYSQKRAVIKFITSNPLKTREVQALLAEGGLRV
PFDIQTLDIQLPELQESPLVIAIEKTRLASNRVKAPCLVEDTSLCLNALG
GLPGPYIKHFLDELGSAGLFKMVEAYEDRSARAICNVGFSPGPGQQPVIF
TGITYGEIVLPEEDDNGFGWDTCFRPSGFTTTFSKMTVNEKNAISHRSLA
LRQFQQYIADNWGEGGFDERGVFK*
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Synonyms
Publications