NO02G03240, NO02G03240 (gene) Nannochloropsis oceanica

Overview
NameNO02G03240
Unique NameNO02G03240
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1248
Alignment locationchr2:870943..872190 +

Link to JBrowse

Properties
Property NameValue
DescriptionMitochondrial-processing peptidase alpha subunit
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:870943..872190 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0003824catalytic activity
GO:0005488binding
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR011249Metalloenz_LuxS/M16
IPR011765Pept_M16_N
Homology
BLAST of NO02G03240 vs. NCBI_GenBank
Match: ETL32242.1 (hypothetical protein L916_15161 [Phytophthora parasitica] >ETO67346.1 hypothetical protein F444_15706 [Phytophthora parasitica P1976] >KUF80273.1 Mitochondrial-processing peptidase subunit alpha-2 [Phytophthora nicotianae])

HSP 1 Score: 134.8 bits (338), Expect = 6.100e-28
Identity = 133/437 (30.43%), Postives = 197/437 (45.08%), Query Frame = 0
Query:    3 RLTRAVPKNLLALASRSQSSLACLDEEFPGLPALNPAVGTPRLVETTTLPSGVKVVSTACGKMSSVGLSVAAGSMYEALPSENGAALLLKHLAFKGTAARSSLRLMRDLESVGSIPSASVGREAVVYRVTSQPDFAEQALQAVFETALTPKITPYLVSELQVAAAADMEAYAADARLQLSEALYEAAYGENTPLGRPLYFPGT--DVTSGSLAAYRAKTFGSGSLTVVGVGVAHAQLSSWAAGLTEGLARGSARAAPISAYVGGEARLKASSDATFVGLAL--AAPSKADAGALGVLAAAWQAAL-----PAGASVFTLPGLVGVTGVASPSAAGAYVDSLLQVLK------STGEDFALAKKAA----------QVAALIKLDWALFEGLADGSATVAVDGVSEAEVKALHAKIWKGGLSIASLGDVSKVPKLSSL 415
            +L     ++L   AS   S    L EEFP +P   P       + T+T  SG+++ S                          G + L   +AF+ T  RS LRL RD+E++G + +A  GR+ V Y V+  PD  E A + + ET L PK   Y V E +    A+ E    +A   L E ++ AA+ ++  LGR L        ++   L A+  K   S +  +VG GVAH  L+  A       A+GS   +  + YVGGE R+K +   T V LAL     + AD GA  VL A     L      A  S ++   +VG++G A+PS AGA VDS    LK      +T E+ A AK  A          Q   L ++      G    S +  V+GV+  +++ L  K  K   S+A++G +S VP + ++
Sbjct:    8 KLAARASRSLFTKASAMPS--VALSEEFPSVPKTQPKAAPAAKLTTSTASSGLQLGSDDRAASVXXXXXXXXXXXXXXXXXTAGVSQLFAKMAFRATENRSDLRLYRDIEAIGGVVNAQAGRDFVRYSVSVLPDQLEAAAEILAETTLAPKFALYDVEEQKKVVQAEFEKITENASASLLEGVHAAAFYDDMTLGRSLVAAENLGALSPEDLWAFYNKYVNSSNAALVGAGVAHNTLTDLANEYFGSFAKGSKATSATAKYVGGETRVKKAGKFTHVALALPTVGRNSADFGASQVLRALLSVRLNNKKASAFLSSYSDAAVVGLSGYAAPSEAGALVDSFAAELKKAASAPATKEELAAAKTTAAFEALEQYSTQAGTLGRVGLIATTGFVSKSPSELVEGVTAEKLQELALKALKATPSVAAIGKLSTVPHVDAV 442          
BLAST of NO02G03240 vs. NCBI_GenBank
Match: ETM38609.1 (hypothetical protein L914_15125 [Phytophthora parasitica])

HSP 1 Score: 134.8 bits (338), Expect = 6.100e-28
Identity = 133/437 (30.43%), Postives = 197/437 (45.08%), Query Frame = 0
Query:    3 RLTRAVPKNLLALASRSQSSLACLDEEFPGLPALNPAVGTPRLVETTTLPSGVKVVSTACGKMSSVGLSVAAGSMYEALPSENGAALLLKHLAFKGTAARSSLRLMRDLESVGSIPSASVGREAVVYRVTSQPDFAEQALQAVFETALTPKITPYLVSELQVAAAADMEAYAADARLQLSEALYEAAYGENTPLGRPLYFPGT--DVTSGSLAAYRAKTFGSGSLTVVGVGVAHAQLSSWAAGLTEGLARGSARAAPISAYVGGEARLKASSDATFVGLAL--AAPSKADAGALGVLAAAWQAAL-----PAGASVFTLPGLVGVTGVASPSAAGAYVDSLLQVLK------STGEDFALAKKAA----------QVAALIKLDWALFEGLADGSATVAVDGVSEAEVKALHAKIWKGGLSIASLGDVSKVPKLSSL 415
            +L     ++L   AS   S    L EEFP +P   P       + T+T  SG+++ S                          G + L   +AF+ T  RS LRL RD+E++G + +A  GR+ V Y V+  PD  E A   + ET L PK   Y V E +    A+ E    +A   L E ++ AA+ ++  LGR L        ++   L A+  K   S +  +VG GVAH  L+  A       A+GS   +  + YVGGE R+K +   T V LAL     + AD GA  VL A     L      A  S ++   +VG++G A+PS AGA VDS    LK      +T E+ A AK  A          Q   L ++      G    S++  V+GV+  +++ L  K  K   S+A++G +S VP + ++
Sbjct:    8 KLAARASRSLFTKASAMPS--VALSEEFPSVPKTQPKAAPAAKLTTSTASSGLQLGSDDRAASVXXXXXXXXXXXXXXXXXTAGVSQLFAKMAFRATENRSDLRLYRDIEAIGGVVNAQAGRDFVRYSVSVLPDQLEAAADILAETTLAPKFALYDVEEQKKVVQAEFEKITENASASLLEGVHAAAFYDDMTLGRSLVAAENLGALSPEDLWAFYNKYVNSSNAALVGAGVAHNTLTDLANEYFGSFAKGSKATSATTKYVGGETRVKKAGKFTHVALALPTVGRNSADFGASQVLRALLSVRLNNKKASAFLSSYSDAAVVGLSGYAAPSEAGALVDSFAAELKKAASAPATKEELAAAKTTAAFEALEQYSTQAGTLGRVGLIATTGFVSKSSSELVEGVTAEKLQELALKALKATPSVAAIGKLSTVPHVDAV 442          
BLAST of NO02G03240 vs. NCBI_GenBank
Match: ETP08482.1 (hypothetical protein F441_15548 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 134.8 bits (338), Expect = 6.100e-28
Identity = 133/437 (30.43%), Postives = 197/437 (45.08%), Query Frame = 0
Query:    3 RLTRAVPKNLLALASRSQSSLACLDEEFPGLPALNPAVGTPRLVETTTLPSGVKVVSTACGKMSSVGLSVAAGSMYEALPSENGAALLLKHLAFKGTAARSSLRLMRDLESVGSIPSASVGREAVVYRVTSQPDFAEQALQAVFETALTPKITPYLVSELQVAAAADMEAYAADARLQLSEALYEAAYGENTPLGRPLYFPGT--DVTSGSLAAYRAKTFGSGSLTVVGVGVAHAQLSSWAAGLTEGLARGSARAAPISAYVGGEARLKASSDATFVGLALAAPSK--ADAGALGVLAAAWQAAL-----PAGASVFTLPGLVGVTGVASPSAAGAYVDSLLQVLK------STGEDFALAKKAA----------QVAALIKLDWALFEGLADGSATVAVDGVSEAEVKALHAKIWKGGLSIASLGDVSKVPKLSSL 415
            +L     ++L   AS   S    L EEFP +P   P       + T+T  SG+++ S                          G + L   +AF+ T  RS LRL RD+E++G + +A  GR+ V Y V+  PD  E A + + ET L PK   Y V E +    A+ E    +A   L E ++ AA+ ++  LGR L        ++   L A+  K   S +  +VG GVAH  L+  A       A+GS   +  + YVGGE R+K +   T V LAL    +  AD GA  VL A     L      A  S ++   +VG++G A+PS AGA VDS    LK      +T E+ A AK  A          Q   L ++      G    S +  V+GV+  +++ L  K  K   S+A++G +S VP + ++
Sbjct:    8 KLAARASRSLFTKASAMPS--VALSEEFPSVPKTQPKAAPAAKLTTSTASSGLQLGSDDRAASVXXXXXXXXXXXXXXXXXTAGVSQLFAKMAFRATENRSDLRLYRDIEAIGGVVNAQAGRDFVRYSVSVLPDQLEAAAEILAETTLAPKFALYDVEEQKKVVQAEFEKITENASASLLEGVHAAAFYDDMTLGRSLVAAENLGALSPEDLWAFYNKYVNSSNAALVGAGVAHNTLTDLANEYFGSFAKGSKATSATTKYVGGETRVKKAGKFTHVALALPTVGRDSADFGASQVLRALLSVRLNNKKASAFLSSYSDAAVVGLSGYAAPSEAGALVDSFAAELKKAASAPATKEELAAAKTTAAFEALEQYSTQAGTLGRVGLIATTGFVSKSPSELVEGVTAEKLQELALKALKATPSVAAIGKLSTVPHVDAV 442          
BLAST of NO02G03240 vs. NCBI_GenBank
Match: ETP36524.1 (hypothetical protein F442_15562 [Phytophthora parasitica P10297])

HSP 1 Score: 133.7 bits (335), Expect = 1.400e-27
Identity = 133/437 (30.43%), Postives = 195/437 (44.62%), Query Frame = 0
Query:    3 RLTRAVPKNLLALASRSQSSLACLDEEFPGLPALNPAVGTPRLVETTTLPSGVKVVSTACGKMSSVGLSVAAGSMYEALPSENGAALLLKHLAFKGTAARSSLRLMRDLESVGSIPSASVGREAVVYRVTSQPDFAEQALQAVFETALTPKITPYLVSELQVAAAADMEAYAADARLQLSEALYEAAYGENTPLGRPLYFPGT--DVTSGSLAAYRAKTFGSGSLTVVGVGVAHAQLSSWAAGLTEGLARGSARAAPISAYVGGEARLKASSDATFVGLAL--AAPSKADAGALGVLAAAWQAAL-----PAGASVFTLPGLVGVTGVASPSAAGAYVDSLLQVLK------STGEDFALAKKAA----------QVAALIKLDWALFEGLADGSATVAVDGVSEAEVKALHAKIWKGGLSIASLGDVSKVPKLSSL 415
            +L     ++L   AS   S    L EEFP +P   P       + T+T  SG+++ S                          G + L   +AF+ T  RS LRL RD+E++G + +A  GR+ V Y V+  PD  E A   + ET L PK   Y V E +    A+ E    +A   L E ++ AA+ ++  LGR L        ++   L A+  K   S +  +VG GVAH  L+  A       A+GS   +  + YVGGE R+K +   T V LAL     + AD GA  VL A     L      A  S ++   +VG++G A+PS AGA VDS    LK      +T E  A AK  A          Q   L ++      G    S +  V+GV+  +++ L  K  K   S+A++G +S VP + ++
Sbjct:    8 KLAARASRSLFTKASAMPS--VALSEEFPSVPKTQPKAAPAAKLTTSTASSGLQLGSDDRAASVXXXXXXXXXXXXXXXXXTAGVSQLFAKMAFRATENRSDLRLYRDIEAIGGVVNAQAGRDFVRYSVSVLPDQLEAAADILAETTLAPKFALYDVEEQKKVVQAEFEKITENASASLLEGVHAAAFYDDVTLGRSLVAAENLGALSPEDLWAFYNKYVNSSNAALVGAGVAHNTLTDLANEYFGSFAKGSKATSATTKYVGGETRVKKAGKFTHVALALPTVGRNSADFGASQVLRALLSVRLNNKKASAFLSSYSDAAVVGLSGYAAPSEAGALVDSFAAELKKAASAPATKEQLAAAKTTAAFEALEQYSTQAGTLGRVGLIATTGFVSKSPSELVEGVTAEKLQELALKALKATPSVAAIGKLSTVPHVDAV 442          
BLAST of NO02G03240 vs. NCBI_GenBank
Match: XP_008895284.1 (hypothetical protein PPTG_04750 [Phytophthora parasitica INRA-310] >ETN19433.1 hypothetical protein PPTG_04750 [Phytophthora parasitica INRA-310])

HSP 1 Score: 132.5 bits (332), Expect = 3.000e-27
Identity = 132/437 (30.21%), Postives = 197/437 (45.08%), Query Frame = 0
Query:    3 RLTRAVPKNLLALASRSQSSLACLDEEFPGLPALNPAVGTPRLVETTTLPSGVKVVSTACGKMSSVGLSVAAGSMYEALPSENGAALLLKHLAFKGTAARSSLRLMRDLESVGSIPSASVGREAVVYRVTSQPDFAEQALQAVFETALTPKITPYLVSELQVAAAADMEAYAADARLQLSEALYEAAYGENTPLGRPLYFPGT--DVTSGSLAAYRAKTFGSGSLTVVGVGVAHAQLSSWAAGLTEGLARGSARAAPISAYVGGEARLKASSDATFVGLAL--AAPSKADAGALGVLAAAWQAAL-----PAGASVFTLPGLVGVTGVASPSAAGAYVDSLLQVLK------STGEDFALAKKAAQVAALI----------KLDWALFEGLADGSATVAVDGVSEAEVKALHAKIWKGGLSIASLGDVSKVPKLSSL 415
            +L     ++L   AS   S    L EEFP +P   P       + T+T  SG+++ S                          G + L   +AF+ T  RS LRL RD+E++G + +A  GR+ V Y V+  PD  E A + + ET L PK   Y V E +    A+ E    +A   L E ++ AA+ ++  LGR L        ++   L A+  K   S +  +VG GVAH  L+  A       A+GS   +  + YVGGE R+K +   T V LAL     + AD GA  VL A     L      A  S ++   ++G++G A+PS AGA VDS    LK      +T E+ A AK  A   AL           ++      G    S +  V+GV+  +++ L  K  K   S+A++G +S VP + ++
Sbjct:    8 KLAARASRSLFTKASAMPS--VALSEEFPSVPKTQPKAAPAAKLTTSTASSGLQLGSDDRAASVXXXXXXXXXXXXXXXXXTAGVSQLFAKMAFRATENRSDLRLYRDIEAIGGVVNAQAGRDFVRYSVSVLPDQLEAAAEILAETTLAPKFALYDVEEQKKVVQAEFEKITENASASLLEGVHAAAFYDDMTLGRSLVAAENLGALSPEDLWAFYNKYVNSSNAALVGAGVAHNTLTDLANEYFGSFAKGSKATSATAKYVGGETRVKKAGKFTHVALALPTVGRNSADFGASQVLRALLSVRLNNKKASAFLSSYSDAAVLGLSGYAAPSEAGALVDSFAAELKKAASAPATKEELAAAKTTAAFEALEQYSTLAGTLGRVGLIATTGFVSKSPSELVEGVTAEKLQELALKALKATPSVAAIGKLSTVPHVDAV 442          
BLAST of NO02G03240 vs. NCBI_GenBank
Match: XP_002291450.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED91557.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 130.2 bits (326), Expect = 1.500e-26
Identity = 130/431 (30.16%), Postives = 201/431 (46.64%), Query Frame = 0
Query:    4 LTRAVPKNLLALASRSQSSLACLDEEFPGLPALNPAVGTPRLVETTTLPSGVKVVSTACGKMSSVGLSVAAGSMYEALPSENGAALLLKHLAFKGTAARSSLRLMRDLESVGSIPSASVGREAVVYRVTSQPDFAEQALQAVFETALTPKITPYLVSELQVAAAADMEAYAADARLQLSEALYEAAYGENTPLGRPLYFPGTDVTSGSLAAYRAKTFGSGSLTVVGVGVAHAQLSSWAAGLTEGLARGSARAAPISA----YVGGEARLKASSDATFVGLALAAPSKADAGALGVLAAAWQAALPAGASVFTLPGLVGVTGVASPSAAGAYVDSLLQVLKS--TGEDFALAKKAAQVAALIKLDWALFEGLADG-SATV-------------AVDGVSEAEVKALHAKIWKGGLSIASLGDVSKVPKLSSL 415
            + R   + +   A     S+    EEFPGL    PA  +      TTLPSG+ +V+      S+V L+  +G     LP+E GAAL  ++L+FK  +  SS  ++R +E VG    A  GR       T+     E A       A       + V E    A  ++ + A DA++ L++ +Y AAYG  + LGR  Y PG   +  S+ ++R + +      +   G+   +            A  S+ A P +A    Y+GGEARL  S+D   V LA   P+ A    + VL       +  GAS F  PG++GV G  +P +A   VD+L + + S  + +  A AK AA+  AL  LD    + LAD  +A+V             + D +SEA+VK  +  +    LS+A++GD++ VP  +S+
Sbjct:    1 MLRQTAQRITQRAGSRGFSVLTASEEFPGLAPPTPAPKSGSSSTLTTLPSGLTIVTENAALTSTVSLTFPSGGSSSELPTEAGAALANRYLSFKSASGLSSAVIVRSVEDVGGQLFARAGRRGATVGYTA---LRENAAFVAPLLAAECSFEKWDVVEAVKLAGEEVGSVAGDAQVSLTDQIYAAAYGAQSSLGRSYYTPG--ASRASIISFRERNYTLNGAVLAATGITDHEAFCRMVEEEFPSAGASSGAPPAAAAKAEYLGGEARLATSADYALVALAFEGPTSAP--MMNVLKHCLN--MSGGASAFASPGVMGVYGGGAPGSAAETVDALSKAVTSAPSADVVARAKAAAKAEALNALDGG-SKSLADAMTASVLDSCGFSAKALGESYDAISEADVKKAYEGMMMSKLSLAAVGDITSVPYHASI 421          
BLAST of NO02G03240 vs. NCBI_GenBank
Match: OQR86119.1 (mitochondrial-processing peptidase subunit alpha [Achlya hypogyna])

HSP 1 Score: 129.4 bits (324), Expect = 2.600e-26
Identity = 136/436 (31.19%), Postives = 221/436 (50.69%), Query Frame = 0
Query:    6 RAVPKNLLALASRSQSSLACLDEEFPGLPALNPA-VGTPRLVETTTLPSGVKVVSTACGKMSSVGLSVAAGSMYEALPSENGAALLLKHLAFKGTAARSSLRLMRDLESVGSIPSASVGREAVVYRVTSQPDFAEQALQAVFETALTPKITPYLVSELQVAAAADMEAYAADARLQLSEALYEAAYGENTPLGRPLYFPGTD-VTSGSLAAYRAKTFGSGSLTVVGVGVAHAQLSSWAAGLTEGLARGSARAAPISA-YVGGEARLKASSDATFVGL-----ALAAPSKADAGAL-GVLAAAWQAALPAGASVFTLPGLVGVTGVASPSAAGAYVDSLLQVLKS------TGEDFALAKKAAQV----------AALIKLDWALF--EGLADGSATVAVDGVSEAEVKALHAKIWKGGLSIASLGDVSKVPKLSSL 415
            RAVP      A+R  SSLA   EE P LPALN + + +   V  T    GV   S A   ++++G++   GS +E+     G +LL   +AF+ T ARS L L RD+E++G   ++SVGR+ V   ++  P+  + A   + E+ L P+   + VS  +  A  D+E   ++A   L+E ++ AA+ +N  LGR +Y      + +  + A+      +G++ +VG G+  A L+  A     G+A  S R+ P +A YVGGE R+ A+S  ++V L     AL+A  K+ A  L  VL +       A  +++    L+G++GVA P  A A V S ++  ++      T  +   AKK++ +           AL +L  + F    + +  A   V+ VS  +V+AL  K+     S+AS+GDVS VP+   +
Sbjct:   12 RAVP------AARHASSLA---EELPYLPALNASPLASEIAVGATGKGLGVASASPAHCTVATLGVTFNTGSRFES-DKNAGISLLASKMAFRATEARSDLALYRDIEAIGGSIASSVGRDYVNLSISVTPEHIDAAAAILAESVLAPRCAEWDVSIQKTKAEVDIELLQSNAAELLAEGIHAAAFYDNRTLGRTVYSKNVSALKAKDVRAFYDANVNAGNMVLVGRGINQAALNDIANTHFSGVA-ASERSKPAAAHYVGGEHRVAAASPVSYVALGFSAGALSAQDKSVAHVLEHVLKSRIAGVSSAFRAIYADASLLGLSGVARPDEAAALVSSFIKEFQTVASTPLTAAELEAAKKSSGLCYSSFVDTKNGALTQLARSAFAQSAITEAGAIAGVNAVSAKDVQALAEKLVASKPSLASVGDVSFVPRYDDI 436          
BLAST of NO02G03240 vs. NCBI_GenBank
Match: GAX15144.1 (hypothetical protein FisN_12Lh155 [Fistulifera solaris])

HSP 1 Score: 119.4 bits (298), Expect = 2.700e-23
Identity = 131/438 (29.91%), Postives = 213/438 (48.63%), Query Frame = 0
Query:    1 MLRLTRAVPKNLLALASRSQSSLACLDEEFPGLPALNPAVGTPRLVETTTLPSGVKVVS-TACGKMSSVGLSVAAGSMYEALPSENGAALLLKHLAFKGTAARSSLRLMRDLESVGSIPSASVGREAVVYRVTSQPDFAEQALQAVFETALTPKITPYLVSELQVAAAADMEAYAADARLQLSEALYEAAYGENTPLGRPLYFPGTDVTSGSLAAYRAKTFG--SGSLTVVGV---GVAHAQLSSWAAGLTEGLARGSARAAPISAYVGGEARLKASSDATFVGLALAAPSKADAGALGVLAAAWQ-AALPAGASVFTLPGLVGVTGVASPSAAGAYVDSLLQVLKS--TGEDFALAKKAAQVAALIKLDWALFEGLADGSATV--------------AVDGVSEAEVKALHAKIWKGGLSIASLGDVSKVPKLSSLK 416
            M R+  A P+ +LA   +  S+L  LD E+PGLPA  P       V  +TLP+G+ V +  +C   + +     AGS  E+L  E GAAL+ K + FK  +  SS+ + R +E  G +P  ++ R       T  P+ A   L  +  T  T     + V +    A  + E     A++ L+E ++ AAYG  +P GRPLY      +  ++ ++R + +G     LTV GV       A++ S+ A    G     A + P  AY+GGE+R+ A+  + +  +A+A P+   +    V+   +     P+G S FT  GLVG+   A  ++AGA  D++++V  +  + +    AK  A+  AL+ L+       +  SA+V              A D VSEA VK   A + K   S+A++GD++ VP  ++L+
Sbjct:    1 MQRVLSAAPRRVLA-GKKRFSALVSLDYEYPGLPAATPQPAKATSVSVSTLPNGLTVATEDSCVNSTVIMTYPKAGSAGESL-DEQGAALMNKCMNFKSGSGLSSILINRTIEDAGGLPFTTLNRAGASLGFTVAPELA-AGLVPLLATDCT--FEKWDVRDALALANTEAEVAGTSAQIVLTENVFAAAYGPQSPAGRPLY--SAPPSLDAIRSFRRRAYGLKDAVLTVTGVKDHAAFCAEVESYLADSPVG-----AGSLPSMAYIGGESRI-ATQGSGYAHVAIAFPAPVSSAVATVVKHYFSVVGGPSGVSGFTADGLVGL--YAGSASAGAVTDAMVKVATTPVSADTLQRAKSLAKGEALLALESGSKALASAISASVLSGQGFGGPKDIVSAYDAVSEAHVKQALAAMLKSNPSLAAVGDIASVPYHATLR 423          
BLAST of NO02G03240 vs. NCBI_GenBank
Match: GAX97683.1 (Hypothetical protein PINS_005516 [Pythium insidiosum])

HSP 1 Score: 118.2 bits (295), Expect = 5.900e-23
Identity = 95/271 (35.06%), Postives = 144/271 (53.14%), Query Frame = 0
Query:   26 LDEEFPGLPALNPA--VGTPRLVETTTLPSGVKVVS-TACGKMSSVGLSVAAGSMYEALPSENGAALLLKHLAFKGTAARSSLRLMRDLESVGSIPSASVGREAVVYRVTSQPDFAEQALQAVFETALTPKITPYLVSELQVAAAADMEAYAADARLQLSEALYEAAYGENTPLGRPLYFPGTD---VTSGSLAAYRAKTFGSGSLTVVGVGVAHAQLSSWAAGLTEGLARGSARAAPISA-----YVGGEARLKASSDATFVGLALAAPS 286
            LD+E PGLP L PA  +  P   E TTLPSG++V+S    G+ ++VG+ V AGS YE   SE G   LL+HL FK T  RS   L+R++E +G++ +AS GRE ++Y +    D AE+AL+ + ++ L     P  +  ++       E    + +  L E ++ AAYG+   LGRPL  P      +T  ++  +R K F +  + + G G+ H  L   A  L   + R S + A  +A     Y GG   ++ + DA F  +ALA P+
Sbjct:   66 LDKELPGLPQLRPASQLQAP-ATEITTLPSGLRVISQETYGQAATVGIFVNAGSRYED-ASEVGVTHLLEHLGFKSTTTRSHAELVREIEDIGALTTASCGREQIIYTIDVLRDNAERALELLADSVLHADFVPEEIDAIKTIMMYQTEDLLENPQALLQEYIHLAAYGQEQALGRPLQCPVDQIERITIDTVKQFRRKHFVADKMVLAGSGIDHQTLVRLAEKLFANVPRSSEKDAATTAPGHVTYHGGLHAIE-NRDAPFSYVALAFPT 333          
BLAST of NO02G03240 vs. NCBI_GenBank
Match: XP_008615873.1 (hypothetical protein SDRG_11607 [Saprolegnia diclina VS20] >EQC30547.1 hypothetical protein SDRG_11607 [Saprolegnia diclina VS20])

HSP 1 Score: 114.8 bits (286), Expect = 6.500e-22
Identity = 125/439 (28.47%), Postives = 213/439 (48.52%), Query Frame = 0
Query:    2 LRLTRAVPKNLLALASRSQSSLACLDEEFPGLPALNPA-VGTPRLVETTTLPSGVKVVSTACGKMSSVGLSVAAGSMYEALPSENGAALLLKHLAFKGTAARSSLRLMRDLESVGSIPSASVGREAVVYRVTSQPDFAEQALQAVFETALTPKITPYLVSELQVAAAADMEAYAADARLQLSEALYEAAYGENTPLGRPLYFPGTD-VTSGSLAAYRAKTFGSGSLTVVGVGVAHAQLSSWAAGLTEGLARGSARAAPISAYVGGEARLKASSDATFVGL-----ALAAPSKADAGAL-GVLAAAWQAALPAGASVFTLPGLVGVTGVASPSAAGAYVDSLLQVLKS------TGEDFALAKKAAQV----------AALIKLDWALF--EGLADGSATVAVDGVSEAEVKALHAKIWKGGLSIASLGDVSKVPKLSSL 415
            L + R+        ++R  SSLA   EE P LPAL+ + + +   V  T    GV   S A   ++++G++   G+ +E+     G +LL   LAF+ T ARS L L RD+E++G   S+SVGR+ V   ++  P+  ++A   + E+ L  +   + VS  +  A  D+E   ++A   LSE ++ AA+ +N  LGR ++      + +  + A+      + ++ +VG G+  + L+  A     G+  G       + YVGGE R+ A+S  ++V L     AL    K+ A  L  VL      A  A  +V+    L+G++GVA P  A A V S L+  ++      +  +   AKK++ +           AL +L  + F    + + S   A+  VS  +V+ L AK+     S+AS+GD++ VP+   +
Sbjct:   16 LSVLRSTASRRALSSARHASSLA---EELPYLPALHASPLASEIAVGATGKGLGVASASPAHCTVATLGVTFNTGARFES-DKNAGISLLASKLAFRSTDARSDLALFRDIEAIGGSISSSVGRDYVNLSISVTPEHIDEAAAILAESVLAARCAEWDVSTQKAKAEVDIELLRSNAADLLSEGIHAAAFYDNRTLGRTVFSKNVSALKAKDVRAFYDANVNAANMVLVGRGINQSALNDIANTHFSGVVAGDRTKPAAAHYVGGEHRVAAASPVSYVALGFSAGALNTQEKSAAHVLEHVLKGRIAGASSAFRAVYADASLLGLSGVARPDDASALVASFLKEFQAVASSPLSAAELEAAKKSSGLCYSSFVDTKNGALTQLARSAFAQSAITEASTHAALHAVSVKDVQTLAAKLVASKPSLASVGDLTHVPRYDDI 450          
The following BLAST results are available for this feature:
BLAST of NO02G03240 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
ETL32242.16.100e-2830.43hypothetical protein L916_15161 [Phytophthora para... [more]
ETM38609.16.100e-2830.43hypothetical protein L914_15125 [Phytophthora para... [more]
ETP08482.16.100e-2830.43hypothetical protein F441_15548 [Phytophthora para... [more]
ETP36524.11.400e-2730.43hypothetical protein F442_15562 [Phytophthora para... [more]
XP_008895284.13.000e-2730.21hypothetical protein PPTG_04750 [Phytophthora para... [more]
XP_002291450.11.500e-2630.16predicted protein [Thalassiosira pseudonana CCMP13... [more]
OQR86119.12.600e-2631.19mitochondrial-processing peptidase subunit alpha [... [more]
GAX15144.12.700e-2329.91hypothetical protein FisN_12Lh155 [Fistulifera sol... [more]
GAX97683.15.900e-2335.06Hypothetical protein PINS_005516 [Pythium insidios... [more]
XP_008615873.16.500e-2228.47hypothetical protein SDRG_11607 [Saprolegnia dicli... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006975NSK006975Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G03240.1NO02G03240.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|574617gene_912Nannochloropsis oceanica (N. oceanica CCMP1779)gene
MPPgene324Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G03240.1NO02G03240.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G03240 ID=NO02G03240|Name=NO02G03240|organism=Nannochloropsis oceanica|type=gene|length=1248bp
ATGTTGCGGCTTACTCGCGCTGTCCCCAAGAACCTGCTGGCATTGGCCAG
CCGTAGTCAGAGCTCCTTGGCCTGCCTTGATGAGGAGTTCCCTGGATTGC
CTGCTTTGAACCCTGCTGTCGGTACGCCGCGTTTGGTGGAGACAACTACG
CTTCCTAGCGGGGTGAAGGTGGTTTCTACGGCATGCGGGAAGATGTCTTC
TGTGGGATTGTCTGTGGCTGCGGGCAGTATGTACGAGGCTCTCCCAAGTG
AGAACGGCGCTGCCTTGTTGCTTAAACATCTTGCCTTTAAAGGGACCGCG
GCACGGTCCTCTTTGCGACTTATGCGCGACCTGGAGAGCGTGGGTTCGAT
CCCGTCAGCCAGTGTCGGAAGGGAGGCTGTGGTGTATCGCGTCACTTCGC
AGCCCGACTTCGCGGAGCAAGCTCTCCAGGCTGTTTTTGAGACCGCTTTG
ACGCCAAAGATAACGCCCTACCTCGTCTCGGAGCTGCAAGTCGCCGCTGC
CGCGGACATGGAAGCCTACGCCGCGGATGCACGTCTGCAGCTGAGCGAGG
CCTTGTACGAGGCGGCCTACGGGGAGAACACGCCCTTAGGCCGGCCCCTA
TACTTCCCAGGCACGGATGTCACTTCGGGATCCCTCGCCGCCTATCGCGC
CAAAACCTTTGGGTCCGGCTCGCTCACTGTGGTGGGGGTTGGGGTCGCGC
ATGCCCAGCTTTCGTCTTGGGCGGCGGGCCTGACGGAGGGATTAGCTAGG
GGCAGCGCCAGGGCTGCGCCTATCTCGGCGTATGTTGGGGGTGAGGCGCG
TCTCAAGGCTTCTTCGGATGCCACTTTTGTGGGCTTGGCACTGGCAGCAC
CAAGCAAGGCGGACGCGGGGGCGTTGGGCGTGTTGGCCGCAGCCTGGCAG
GCGGCCTTGCCTGCGGGCGCGTCCGTCTTTACGCTACCTGGCCTGGTGGG
CGTGACGGGCGTGGCTTCTCCCAGTGCGGCGGGGGCCTACGTGGATTCGT
TACTTCAGGTGCTCAAGAGCACGGGGGAGGACTTTGCCTTGGCCAAAAAA
GCAGCACAAGTAGCGGCCTTGATCAAGCTGGACTGGGCGCTTTTTGAAGG
CCTGGCAGACGGGAGTGCCACAGTTGCTGTTGACGGGGTTTCCGAGGCGG
AAGTCAAGGCTCTTCATGCCAAGATCTGGAAGGGTGGCCTCAGCATTGCC
TCGCTCGGGGATGTGAGCAAGGTGCCCAAGCTCTCCAGCCTCAAGTAA
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protein sequence of NO02G03240.1

>NO02G03240.1-protein ID=NO02G03240.1-protein|Name=NO02G03240.1|organism=Nannochloropsis oceanica|type=polypeptide|length=416bp
MLRLTRAVPKNLLALASRSQSSLACLDEEFPGLPALNPAVGTPRLVETTT
LPSGVKVVSTACGKMSSVGLSVAAGSMYEALPSENGAALLLKHLAFKGTA
ARSSLRLMRDLESVGSIPSASVGREAVVYRVTSQPDFAEQALQAVFETAL
TPKITPYLVSELQVAAAADMEAYAADARLQLSEALYEAAYGENTPLGRPL
YFPGTDVTSGSLAAYRAKTFGSGSLTVVGVGVAHAQLSSWAAGLTEGLAR
GSARAAPISAYVGGEARLKASSDATFVGLALAAPSKADAGALGVLAAAWQ
AALPAGASVFTLPGLVGVTGVASPSAAGAYVDSLLQVLKSTGEDFALAKK
AAQVAALIKLDWALFEGLADGSATVAVDGVSEAEVKALHAKIWKGGLSIA
SLGDVSKVPKLSSLK*
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Synonyms
Publications