NO02G03210, NO02G03210 (gene) Nannochloropsis oceanica

Overview
NameNO02G03210
Unique NameNO02G03210
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4999
Alignment locationchr2:860973..865971 -

Link to JBrowse

Properties
Property NameValue
DescriptionElongation factor p
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:860973..865971 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0043043peptide biosynthetic process
GO:0006414translational elongation
Vocabulary: Molecular Function
TermDefinition
GO:0003746translation elongation factor activity
GO:0008135translation factor activity, RNA binding
Vocabulary: INTERPRO
TermDefinition
IPR012340NA-bd_OB-fold
IPR008991Translation_prot_SH3-like
IPR020599Transl_elong_fac_P/YeiP
IPR013185Transl_elong_KOW-like
IPR015365Elong-fact-P_C
IPR001059Transl_elong_P/YeiP_cen
Homology
BLAST of NO02G03210 vs. NCBI_GenBank
Match: EWM30330.1 (elongation factor p [Nannochloropsis gaditana])

HSP 1 Score: 348.2 bits (892), Expect = 2.000e-92
Identity = 173/223 (77.58%), Postives = 193/223 (86.55%), Query Frame = 0
Query:    6 LAVAVASFSVASAFFSPLPALPLVRVVQRRNNAQRQIIVALTSNDLKNGLNIELDGTPMRVVEFLHVKPGKGAAFVRSKLKNLISGTTMEKTFRAGESVEEASVIKMDMQFSYDDGEAYQFMNLETYETESVPKTAFSSNNQGSFLLEGMVVQITKWNERAIDVELPPNYIYEVVETDPNFKGNTAQGGSKPAKLNSGATVTVPMFIEVGEKIKVDTREATYV 229
            L +AV S SV+S F  P     L     +    ++ +IV LTSNDLKNGL+IE+DGTPMRV+EFLHVKPGKGAAFVRSKLKNL++G+TMEKTFRAGESV+EA V+K +MQFSYDDG++YQFMNLETYETE VPKT F +NNQGSFLLEGMVVQITKWN+R ID ELPPNYIYEVVETDPNFKGNTAQG SKPAKLNSGATVTVPMFIEVGEKIKVDTREATY+
Sbjct:    8 LVIAVTSLSVSSTFLLPQTGKLLSHSTPKNGFPRKNVIVGLTSNDLKNGLSIEVDGTPMRVIEFLHVKPGKGAAFVRSKLKNLLTGSTMEKTFRAGESVDEAQVMKTEMQFSYDDGDSYQFMNLETYETEGVPKTVFETNNQGSFLLEGMVVQITKWNDRTIDAELPPNYIYEVVETDPNFKGNTAQGASKPAKLNSGATVTVPMFIEVGEKIKVDTREATYL 230          
BLAST of NO02G03210 vs. NCBI_GenBank
Match: XP_005705102.1 (elongation factor EF-P [Galdieria sulphuraria] >EME28582.1 elongation factor EF-P [Galdieria sulphuraria])

HSP 1 Score: 224.9 bits (572), Expect = 2.500e-55
Identity = 109/194 (56.19%), Postives = 147/194 (75.77%), Query Frame = 0
Query:   37 NAQRQIIVALTSNDLKNGLNIELDGTPMRVVEFLHVKPGKGAAFVRSKLKNLISGTTMEKTFRAGESVEEASVIKMDMQFSYDDGEAYQFMNLETYETESVPKTAFSSNNQGSFLLEGMVVQITKWNERAIDVELPPNYIYEVVETDPNFKGNTAQGGSKPAKLNSGATVTVPMFIEVGEKIKVDTREATYVSR 231
            ++ RQ+   + SND++ G  I +DG+  RV+EFLHVKPGKGAAFVR+KLKNL +G+T+EKTFRAGE ++EA++ K+DMQ +Y +GE Y FMNLE+ + E + K++ SS  Q  +L EG  V I K N R +D+E+PPN + EVV T+P  KGNTAQGG+KPA L +G TV VP+F+E G+K+KVDTRE  Y+SR
Sbjct:   67 SSYRQVTAVINSNDIRPGTTILVDGSVHRVIEFLHVKPGKGAAFVRTKLKNLETGSTVEKTFRAGERIDEATLDKLDMQLAYIEGEQYVFMNLESLDEERISKSSLSSAAQ-KYLKEGESVSILKHNGRVLDLEIPPNVVLEVVYTEPGIKGNTAQGGTKPATLETGVTVNVPLFVETGDKVKVDTREDKYISR 259          
BLAST of NO02G03210 vs. NCBI_GenBank
Match: XP_005536590.1 (chloroplast translation elongation factor P [Cyanidioschyzon merolae strain 10D] >BAM80554.1 chloroplast translation elongation factor P [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 219.5 bits (558), Expect = 1.100e-53
Identity = 114/204 (55.88%), Postives = 143/204 (70.10%), Query Frame = 0
Query:   30 RVVQRRNNAQR--QIIVALTSNDLKNGLNIELDGTPMRVVEFLHVKPGKGAAFVRSKLKNLISGTTMEKTFRAGESVEEASVIKMDMQFSYDDGEAYQFMNLETYETESVPKTAFSSNNQGSFLLEGMVVQITKWNERAIDVELPPNYIYEVVETDPNFKGNTAQGGSKPAKLNSGATVTVPMFIEVGEKIKVDTREATYVSRG 232
            R V RR  A+R     + + SND + GL IE+DG+P +V+E LHVKPGKGAAFVR+KLKNL++G TME+TFRAGE+V EA V K + Q++Y     Y FMN+ T+E E VP       +   +L  G  V +TKWN + I+VE+P     EVVETDP  +GNTAQGGSKPAKL +G  V VP+FIEVGEKIKVDTR  +Y+SRG
Sbjct:   61 RGVPRRPVAERWWSPRMDVNSNDFRVGLTIEVDGSPFKVIEHLHVKPGKGAAFVRTKLKNLLTGNTMERTFRAGETVPEAQVEKFEAQYTYSAENEYVFMNMATFEEEHVPNEVV--GDTAKYLRVGQDVSVTKWNGKPIEVEVPATLTLEVVETDPGVRGNTAQGGSKPAKLETGVVVQVPLFIEVGEKIKVDTRTGSYLSRG 262          
BLAST of NO02G03210 vs. NCBI_GenBank
Match: XP_005844252.1 (hypothetical protein CHLNCDRAFT_58991 [Chlorella variabilis] >EFN52150.1 hypothetical protein CHLNCDRAFT_58991 [Chlorella variabilis])

HSP 1 Score: 214.9 bits (546), Expect = 2.600e-52
Identity = 105/185 (56.76%), Postives = 136/185 (73.51%), Query Frame = 0
Query:   46 LTSNDLKNGLNIELDGTPMRVVEFLHVKPGKGAAFVRSKLKNLISGTTMEKTFRAGESVEEASVIKMDMQFSYDDGEAYQFMNLETYETESVPKTAFSSNNQGSFLLEGMVVQITKWNERAIDVELPPNYIYEVVETDPNFKGNTAQGGSKPAKLNSGATVTVPMFIEVGEKIKVDTREATYVSR 231
            ++SND KNG+ IE+DG P +VVEFLHVKPGKGAAFVRSKLKN I+  T+EKT+RAGE+VE A+V K + QF+Y +G+ Y FM++ TYE   +P+      +   +L EGM V +  WN + I VELP     EVVETDP  +GNTA GGSKPAKL +GA + VP+FI +G+++KVDTR  TY+SR
Sbjct:  920 VSSNDFKNGMTIEMDGAPYKVVEFLHVKPGKGAAFVRSKLKNFITNNTVEKTWRAGETVELAAVEKKETQFTYAEGDEYVFMDMSTYEETRIPR----DEDWAKYLKEGMDVGVLLWNGKVISVELPNTVELEVVETDPGLRGNTAAGGSKPAKLETGAVIQVPLFINLGDRLKVDTRSDTYLSR 1100          
BLAST of NO02G03210 vs. NCBI_GenBank
Match: XP_015961283.1 (uncharacterized protein LOC107485285 [Arachis duranensis])

HSP 1 Score: 214.5 bits (545), Expect = 3.400e-52
Identity = 111/230 (48.26%), Postives = 155/230 (67.39%), Query Frame = 0
Query:    1 MKIPALAVAVASFSVASAFFSPLPALPLVRVVQRRNNAQRQIIVALTSNDLKNGLNIELDGTPMRVVEFLHVKPGKGAAFVRSKLKNLISGTTMEKTFRAGESVEEASVIKMDMQFSYDDGEAYQFMNLETYETESVPKTAFSSNNQGSFLLEGMVVQITKWNERAIDVELPPNYIYEVVETDPNFKGNTAQGGSKPAKLNSGATVTVPMFIEVGEKIKVDTREATYVSR 231
            +K+   +  +++F+  S+ FS  P+L  +R     +  +   I ALTSND+K G N+E+DG P RV+EFLHVKPGKGAAFVR+KLKN ++G T+EKTFRAG S++EA+V+K   QFSY DG  Y FM+L T+E   + ++      +  +L EGM   +  WN + ID++LP      VV+ DP  KG+TAQGGSKPA L++GA V VP+F+ +GE+I VDTR   Y+SR
Sbjct:    9 LKLSPFSSVMSTFTSPSSSFSSNPSLLPMRTPSSSSTTRFLRIYALTSNDIKVGTNLEVDGAPWRVLEFLHVKPGKGAAFVRTKLKNYVTGNTVEKTFRAGSSIDEANVVKETKQFSYKDGSQYVFMDLNTFEESRLGESEVGDKTK--WLKEGMDCNLLFWNGKVIDLDLPITVKLTVVDVDPGLKGDTAQGGSKPATLDTGAVVNVPLFVNIGEEIMVDTRTGQYMSR 236          
BLAST of NO02G03210 vs. NCBI_GenBank
Match: XP_016198612.1 (uncharacterized protein LOC107639587 [Arachis ipaensis])

HSP 1 Score: 214.2 bits (544), Expect = 4.500e-52
Identity = 111/230 (48.26%), Postives = 155/230 (67.39%), Query Frame = 0
Query:    1 MKIPALAVAVASFSVASAFFSPLPALPLVRVVQRRNNAQRQIIVALTSNDLKNGLNIELDGTPMRVVEFLHVKPGKGAAFVRSKLKNLISGTTMEKTFRAGESVEEASVIKMDMQFSYDDGEAYQFMNLETYETESVPKTAFSSNNQGSFLLEGMVVQITKWNERAIDVELPPNYIYEVVETDPNFKGNTAQGGSKPAKLNSGATVTVPMFIEVGEKIKVDTREATYVSR 231
            +K+   +  +++F+  S+ FS  P+L  +R     +  +   I ALTSND+K G N+E+DG P RV+EFLHVKPGKGAAFVR+KLKN ++G T+EKTFRAG S++EA+V+K   QFSY DG  Y FM+L T+E   + ++      +  +L EGM   +  WN + ID++LP      VV+ DP  KG+TAQGGSKPA L++GA V VP+F+ +GE+I VDTR   Y+SR
Sbjct:    9 LKLSPFSSIMSTFTSPSSSFSSNPSLLPMRTPSSSSTTRFLRIYALTSNDIKVGTNLEVDGAPWRVLEFLHVKPGKGAAFVRTKLKNYVTGNTVEKTFRAGSSIDEANVVKETKQFSYKDGSQYVFMDLNTFEESRLGESEVGDKTK--WLKEGMDCNLLFWNGKVIDLDLPITVKLTVVDVDPGLKGDTAQGGSKPATLDTGAVVNVPLFVNIGEEIMVDTRTGQYMSR 236          
BLAST of NO02G03210 vs. NCBI_GenBank
Match: WP_017323914.1 (elongation factor P [Synechococcus sp. PCC 7336])

HSP 1 Score: 212.2 bits (539), Expect = 1.700e-51
Identity = 104/185 (56.22%), Postives = 137/185 (74.05%), Query Frame = 0
Query:   46 LTSNDLKNGLNIELDGTPMRVVEFLHVKPGKGAAFVRSKLKNLISGTTMEKTFRAGESVEEASVIKMDMQFSYDDGEAYQFMNLETYETESVPKTAFSSNNQGSFLLEGMVVQITKWNERAIDVELPPNYIYEVVETDPNFKGNTAQGGSKPAKLNSGATVTVPMFIEVGEKIKVDTREATYVSR 231
            ++SND + G +IELDG+P +V+EFLHVKPGKG+AFVR+KLKN+ +G  MEKTFRAGE V +A++ K+DMQ+ Y DG+ Y FM++E+YE    P T      Q  +L +GM V I +WNE  I VELP   + EVVETDP  KG+TA GG+KPAKL +GA + VP+FI++GE IKVDTR  +Y+ R
Sbjct:    2 ISSNDFRTGTSIELDGSPWKVLEFLHVKPGKGSAFVRTKLKNMQTGNVMEKTFRAGEMVPQANLEKVDMQYLYKDGDDYVFMDMESYEQS--PLTEAQIGEQIKYLKDGMDVAILRWNELVIAVELPNTVVLEVVETDPGVKGDTATGGTKPAKLETGAEIQVPLFIKIGETIKVDTRNDSYLGR 184          
BLAST of NO02G03210 vs. NCBI_GenBank
Match: WP_019493184.1 (MULTISPECIES: elongation factor P [Calothrix] >OKH55665.1 elongation factor P [Calothrix sp. HK-06])

HSP 1 Score: 209.9 bits (533), Expect = 8.400e-51
Identity = 103/185 (55.68%), Postives = 139/185 (75.14%), Query Frame = 0
Query:   46 LTSNDLKNGLNIELDGTPMRVVEFLHVKPGKGAAFVRSKLKNLISGTTMEKTFRAGESVEEASVIKMDMQFSYDDGEAYQFMNLETYETESVPKTAFSSNNQGSFLLEGMVVQITKWNERAIDVELPPNYIYEVVETDPNFKGNTAQGGSKPAKLNSGATVTVPMFIEVGEKIKVDTREATYVSR 231
            ++SND + G++I LDG+  RVVEFLHVKPGKGAAFVR+KLKN  SG T+E+TFRAGE+V +A++ K  MQ +Y +G+ Y FM++ETYE   +  TA    ++  +L EGM   + +WNE+ +DVELP + + EV+ETDP  KG+TA GGSKPAKL +GATV VP+FI  GE+I++DTRE  Y+ R
Sbjct:    2 ISSNDFRPGVSIVLDGSVWRVVEFLHVKPGKGAAFVRTKLKNAQSGNTVERTFRAGETVPQANLEKSTMQHTYKEGDEYVFMDMETYEEGRL--TAQQIGDKVKYLKEGMEANVVRWNEQVLDVELPNSVVLEVIETDPGVKGDTATGGSKPAKLETGATVMVPLFIAQGERIRIDTREDKYLGR 184          
BLAST of NO02G03210 vs. NCBI_GenBank
Match: PRW61595.1 (dihydroxy-acid dehydratase [Chlorella sorokiniana])

HSP 1 Score: 209.5 bits (532), Expect = 1.100e-50
Identity = 104/185 (56.22%), Postives = 133/185 (71.89%), Query Frame = 0
Query:   46 LTSNDLKNGLNIELDGTPMRVVEFLHVKPGKGAAFVRSKLKNLISGTTMEKTFRAGESVEEASVIKMDMQFSYDDGEAYQFMNLETYETESVPKTAFSSNNQGSFLLEGMVVQITKWNERAIDVELPPNYIYEVVETDPNFKGNTAQGGSKPAKLNSGATVTVPMFIEVGEKIKVDTREATYVSR 231
            ++SND K G+ IE DG P +VVEFLHVKPGKGAAFVRSKLKN I+  T+EKT+RAGE+V+ A+V K + QF+Y +G+ Y FM++ TYE   VP+      +   ++ EGM V +  WN + I VE P     EVVETDP  KGNTA GGSKPAKL +GA + VP+FI+ GE+IKVDTR  +Y+SR
Sbjct:  647 VSSNDFKTGMTIEFDGAPYKVVEFLHVKPGKGAAFVRSKLKNFITNNTVEKTWRAGETVDLANVEKKETQFTYAEGDEYVFMDMTTYEETRVPR----DEDWAKYMKEGMTVGVLLWNGKVISVEPPNTVELEVVETDPGVKGNTASGGSKPAKLETGAVIQVPLFIQQGERIKVDTRSDSYLSR 827          
BLAST of NO02G03210 vs. NCBI_GenBank
Match: WP_011432091.1 (elongation factor P [Synechococcus sp. JA-2-3B'a(2-13)] >Q2JP65.1 RecName: Full=Elongation factor P; Short=EF-P >ABD01430.1 translation elongation factor P [Synechococcus sp. JA-2-3B'a(2-13)])

HSP 1 Score: 209.1 bits (531), Expect = 1.400e-50
Identity = 101/185 (54.59%), Postives = 138/185 (74.59%), Query Frame = 0
Query:   46 LTSNDLKNGLNIELDGTPMRVVEFLHVKPGKGAAFVRSKLKNLISGTTMEKTFRAGESVEEASVIKMDMQFSYDDGEAYQFMNLETYETESVPKTAFSSNNQGSFLLEGMVVQITKWNERAIDVELPPNYIYEVVETDPNFKGNTAQGGSKPAKLNSGATVTVPMFIEVGEKIKVDTREATYVSR 231
            ++SNDL+ G+++E+DG P +V+EFLHVKPGKGAAFVR+KLKN+ +G  +EKTFRAGE++  A++ K++MQ+ Y +G    FM++ETY  E  P TA    +   +L E M V I +WN + IDVELP   + EVVETDP  KG+TA GG+KPAKL +GA + VP+FI+VGE+I+VDTR  TY+ R
Sbjct:    2 ISSNDLRPGVSVEIDGAPYKVIEFLHVKPGKGAAFVRTKLKNMQTGNVVEKTFRAGETLPAATIEKVEMQYLYAEGNNLVFMDMETY--EQAPITAAQIGSAVKYLKENMQVSILRWNGQVIDVELPNTVVLEVVETDPGVKGDTATGGTKPAKLETGAEIQVPLFIKVGERIRVDTRTDTYLGR 184          
The following BLAST results are available for this feature:
BLAST of NO02G03210 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30330.12.000e-9277.58elongation factor p [Nannochloropsis gaditana][more]
XP_005705102.12.500e-5556.19elongation factor EF-P [Galdieria sulphuraria] >EM... [more]
XP_005536590.11.100e-5355.88chloroplast translation elongation factor P [Cyani... [more]
XP_005844252.12.600e-5256.76hypothetical protein CHLNCDRAFT_58991 [Chlorella v... [more]
XP_015961283.13.400e-5248.26uncharacterized protein LOC107485285 [Arachis dura... [more]
XP_016198612.14.500e-5248.26uncharacterized protein LOC107639587 [Arachis ipae... [more]
WP_017323914.11.700e-5156.22elongation factor P [Synechococcus sp. PCC 7336][more]
WP_019493184.18.400e-5155.68MULTISPECIES: elongation factor P [Calothrix] >OKH... [more]
PRW61595.11.100e-5056.22dihydroxy-acid dehydratase [Chlorella sorokiniana][more]
WP_011432091.11.400e-5054.59elongation factor P [Synechococcus sp. JA-2-3B'a(2... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006972NSK006972Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G03210.1NO02G03210.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|574610gene_909Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100003g164gene321Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G03210.1NO02G03210.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G03210 ID=NO02G03210|Name=NO02G03210|organism=Nannochloropsis oceanica|type=gene|length=4999bp
GTAGACAAAGGAAGTATCAATCTGCATCCTGTTTTCTTTTTCTCTTGGTG
CCATGTCCCCTTTGAGAAGGTTAAGGGTCCTCTCAGCAACAGGGCTCAGT
ATCTTCCACCTCCTAAATTCTTTTTCCCCAACGCCTATCTTGAGTGGGAG
AAAGCTTTCCTTTAAAATCTATACAACAGCCCCGCTCCTCTTCGGCATCA
CATCTTTCCTGTTCTCGAATGTCCAATGCCTCATTATGCCCCCTGTGGTT
GCAGCTCGCGGTCGATGACGGTCGTTGCGGGAGGTGGCGTAGCCGCAGGT
GGGGCTGGCACACGCCGACGGGGTGTCATTTTCAAGCCATTTCGGGTGTG
AATTGTGGCACCTGTGAACATGCCCACGTCCTCGGGCCTCCCTACAAAGT
CAAAATCGAAGCGACGCAAGAGCATGGCCAGCGTGACGGTTGCCTCAAGT
GTCGCAAATTGATCGCCCACGCACTTGCGTGCACCCCCACCAAAGGGTAG
CATGGCGAAATCCGCAGCCACTTCGTTGGGGTACAGGCCAGTGACTTGTG
CGGGGTCAAACCCCGCCCAGTCTGGGTACTTGGCCTTGTTGCTGTGAGGG
CGAAGGTATCGCTCCGGGTCAAAGTTGTCCGGTTTAGGCCACAAATCCGG
GTCGCGGTGCAGGTTGTAGATTGAGATGAATATGTCGCAGCCGCGGATGA
TGCGGGGTTCGAAGCCCGCCGTGCCCTTGGGCAAGGTGTGGTCCTCTAGG
GCCCGACGGATGAGGAGAGGTGGTTCCGGGTACATGCGCAGCGACTCGGC
CACACTGAAGCGCACCAGTTGCATGGCCTTGATATCCTCCAAGGTAGGCA
TGCGGTCCCCTAGCACTCGGTCCACCTCAGCCTGCAGCTTGGCCCGTACG
TCAGGCTTCTGCGAAATTTCAAACAGGGCCCAGGTTAGGACAGCAGCCGT
TGTCTCGTGGCCAGCAATGAGCATCGTCATGAGATCGTCTCTCAATTGCT
TGTTGCTCGTGTCCTCCCCCCGCAGGTCCACCAGGAACCGGAGCAGCGAG
GCATCGCCGACCTTGTTGTAATTGCGTTTTTCCAAGTCCTCGAGGTCTGT
TACTTCTTGCGAGTTACGTGCCTTCTCGATCAGCTCGTCCAGGACGTCAT
TGATGACCTTCAGGTCGGCCTTGAACTTGCGGAGGCGAGGCACCACCAAG
TTGGCAAGGGGTAGGTTCCAATAAGGCAGGGGAGTGACAGAGCGATGCTC
GGCTTCCTTTAGGACACTATAGACAGCCTGGATGACGGGAGACTCCTTAG
TGACCGAGTCGAACGGGTAGTTGAATACAGCTTTGCCGATAATGTCCAGC
GATACGGAGCAAAAGAGGTTCTCCATGTCCACGTCTGTCTTGGTGGCGGC
AAGGCCGTCAAGCTTCTGCATAAGCACGTCGCTGCAGCCCCCGAACAGGC
TAATCATGTGCTCCAACCACTGCTGATGAAAGGCAGGCACGATCGCGCGG
CGCCGGACCTTCCAGGTCTCGTTGTCGGCCGGGATCAATCCCTTGCCCAT
GATAGGCTCCAAGATCTCGGCCAGCAAGCCCTTGTCGTAGGCGGCGTTGT
TCGTCTTGAGCACGTGCTTGATAATGGTGGGGTCCGAAAGCACAATGAAG
GATTTCGGGCCAAAACATAGCTTATACACGGGACCATACTTGCGAAAGTA
TTGGTACAGGCCCAGAAAGGCCGTCCCGTCCGTCATGGAGGAGACCTCCC
CCTCGGCCAGCGGGGCCCCATCCACACTGGGCTCGTTGCCGTATATCTGC
TCAATGTTTTTACGCAGCACATGCGCCACATCCCCAAATTCAATGGGTGT
ACCCGGTTTGCCTCTTTTCATGACTGGCAGCTTCCAAACCAGGTTCCACA
CCGCCTTGCCGAAGGGATTTCCTTCAAAGACCTCCATCCGGCTGGCCCCC
CTCCTGCGTCTTTGGTAAGACGGGATAGCCGGCCAACCAGGAGCAACCTG
GTAGCCACCGCCAATGAAGCCTGTCGCTGTCCTTCTGCTGCTACCAATAC
CCTCGGCGCCCTGGATAAGCACCGTCAGCGCCGCTGTCAGGAGAAGGCAG
TGCATATGGCTATGGGTAAGGGGGAAGGAGAAGGGAGGGGACAGGAGGAG
CAAGTGAGGGTGACATAGCAGCCGAGGGAAAGTCGACAGGGGAAAATGGG
AACGGCAAGCACCACGGGCAAGCTGTAATTCTGCCCGCATTTCTTCACAA
AATGACCATCACCGTACACCATGACGTGCAACCACACGACACAAGACGCA
TGCGTCCGAAAAATAGATTTCCGGCAACAAGTCGCTTCAACTCAAGCAAA
GCAATTGTTGTTGAATCGGTGAGAACTAGAACTCCCTCGTAATGCCTCAA
AAGCACCATTTGCTTACGAATGGCATGCACTCAACCGATTTCACGTCCTT
GCGGATGACACCCGTTTCTTGTCCCCATTACACACAGGGCCTGCTTTAGT
CCTTGCGCGTTGCCGACCGTCCATTCGCGATGAAGATACCCGCACTTGgt
gagttgaatgatgtgggagggctgcacaaaacgggggatcagcatgctca
cgcaaacccttccggcgcccatgaccatccgttcccacttatacagCCGT
GGCTGTCGCCTCTTTTTCGGTAGCCAGCGCCTTCTTTTCGCCCCTGgtac
agtgactggagggagagagtgggaaagcgcacgctgagcagccgcctgat
tcctgtcactctcacgtcctgaatcaatcctccataattcttcctccctt
ttcaccacaaaagCCTGCCTTACCCTTGGTACGGGTGGTACAGCGACGGA
ATAATGCCCAGCGGCAAATCATTGTGGCCCTGACAAGCAATGACCTTAAG
AATGGGTTGAACATCGAGCTCGACGGCACGCCCATGCGGgtacgttgctg
cttggtgctttggggttgacgtcgggataagcatggtagtcatggtagtt
gatgcatgtaacatgtcaagatgtcagacaatgttcaacctttacgatgt
ctggggtcttgtagcatgcagtgtacgagttgtctgtcccctcccaaaca
actaacccgtactgaaggagtaggggcaccccgagatctgtattcaaatc
tgagacagccaagaaaagtacacgaatcatttgcttctggagaggaaatt
gagaataggtgcctcataccactaacgcttattctccaccggcctcctta
ccgtaccgacattttctcccttccctctcttctggatatcaaccttagGT
GGTGGAATTTCTGCATGTCAAACCAGGAAAGGGTGCGGCCTTTGTGCGCT
CTAAGCTCAAAAACCTCATTTCGGGCACGACCATGGAAAAGACCTTTCGG
GCGGGCGAGTCAGTGGAAGAGGCGTCAGTTATCAAGATGGACATGCAGTT
CTCCTACGACGACGGCGAGGCTTACCAGTTCATGAACTTGGAGACTTACG
AGACGGAGAGCGTACCCAAGACTGCCTTTTCATCCAATAACCAAGGGTCC
TTCCTCCTGGAAGGCATGGTCGTGCAGgtacgagggaacgagtgatgacg
acgagctcttaccctctctcaacagaaacgggaacttgctggttcattgc
ttagtgtcatgcgatcaaatttgcccatttgaccgtgctctctctaacca
tgttgccccgcaatagctcaccttttcctcccttcaatttcatccactac
caaaacttacactctcatgacagATAACCAAGTGGAATGAGCGGGCCATT
GATGTAGAGCTGCCGCCCAACTACATCTACGAGGTAGTGGAGACCGACCC
CAACTTCAAGGGAAACACCGCACAGGGCGGCTCCAAGCCAGCCAAGCTCA
ATTCTGGCGCCACTGTGACAGTGCCCATGTTCATCGAGGTCGGAGAGAAG
ATCAAGGTTGACACGAGAGAGGCAACGTACGTGTCGCGGGGGGAATCTTA
GGACATTCGAGTAAGCATGAGGGAGATTCGGTAGAGCGAGGGAATACCCT
CTTTTGCGCTGCCAAGGCACAATGCTGATATTAAATTTAAAGAGGTGTGG
GACGGGAGCCAGCTTCCCAGACACCAGACACGACAGCATTTGGACTCAGG
ATGGTAACATGAAAAGAAGAGAGAACAACTCCATGCCATACATAACTGGT
TCCTTTTGAGTGCAGGGCTTCTTATGGCTCGTGCCGAACAAGACCGACAC
TGCATCGTGCGGAGCATCACACTTCCATGAGAGGCTTCTCATTCATTTAC
ACATGATATTGCCCACACCTCCCTAAAACTTTTCTCCCAGCGATGCGACT
TTTCCGCGTGGCAAATTTCACAAGACGATCTCATGTATACACGACTCGAG
TAGCGACCACCTACACAGGCATACAATACACAAATTTACACACCCACACT
GTCAGGCCGTTTTTGTGCAACAAAAATTTGATTTCTTGCGCTTACAGGCG
ATTGTGGCCATCATGTGTAATATCTTGTGAAAGTCACCGCAAAGGGCCAT
GTCGGTGGTATCGTTGTTATGAAAATAGGCTGGACGATTACCGCATCGGG
TCTGTAGGACCCTACACATTGACCGTATGAGAGTTAAAAAAATAGACATT
ATTCTCTTCCAACAAATTTTGCTCCTATCACAAAGACCGGGTTGTCCAAA
GCATGCCCCAGGCCTATCAGTCTCGGCACCTTTCTCATGAATTGGAAATT
AGAACAATTAGAAGACACAGCTTGCCCGAAGAATCGATTGATAGATAGAT
TCTTTTGTGAGTTCGATATTGACCGTGGTTAAGCCTCTTTCATTATCGCA
GTATCTAGATGGGTCATCAACAACCATTTGTGAGTCAGGTGGGGGAGACT
GTGCTATTATGGTTAGGGTGGGGGGAGAAAGCTTGGGCCATCATTCATGG
TGAAAAATTTCCGCCTCCCCATCGCGACCGGCCTCCCCCCTCAATTCTC
back to top

protein sequence of NO02G03210.1

>NO02G03210.1-protein ID=NO02G03210.1-protein|Name=NO02G03210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=234bp
MKIPALAVAVASFSVASAFFSPLPALPLVRVVQRRNNAQRQIIVALTSND
LKNGLNIELDGTPMRVVEFLHVKPGKGAAFVRSKLKNLISGTTMEKTFRA
GESVEEASVIKMDMQFSYDDGEAYQFMNLETYETESVPKTAFSSNNQGSF
LLEGMVVQITKWNERAIDVELPPNYIYEVVETDPNFKGNTAQGGSKPAKL
NSGATVTVPMFIEVGEKIKVDTREATYVSRGES*
back to top
Synonyms
Publications