NO02G03060, NO02G03060 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G03060 vs. NCBI_GenBank
Match: XP_024586813.1 (orm1-like protein [Plasmopara halstedii] >CEG50444.1 orm1-like protein [Plasmopara halstedii]) HSP 1 Score: 120.6 bits (301), Expect = 7.300e-24 Identity = 57/113 (50.44%), Postives = 75/113 (66.37%), Query Frame = 0 Query: 117 GMVLMVTHVVHNVVFFYLFHWIKGSPDNFSQGEFNGLTLWEQIDDGIPWTKTKKLFFLIHTVLVFAASYVTDYDLNYLAMNGPVYILLGIIPKIPEMHRVRVFGWNKTTGIDD 230 G L +V+H VV F + HW+KGSPD+ S G++ LT +EQID G PWT TKK +I T L AAS TDY+ +L +N P++ L I+ K+PE+ RVR+FG N T GIDD Sbjct: 9 GDALTAVNVIHGVVSFGIMHWVKGSPDDNSMGDYRELTFYEQIDQGHPWTNTKKFLMMIPTFLFLAASVATDYNTRHLLVNFPIWATL-ILAKLPELDRVRIFGINSTVGIDD 120
BLAST of NO02G03060 vs. NCBI_GenBank
Match: XP_008613679.1 (hypothetical protein SDRG_09515 [Saprolegnia diclina VS20] >EQC32993.1 hypothetical protein SDRG_09515 [Saprolegnia diclina VS20]) HSP 1 Score: 119.0 bits (297), Expect = 2.100e-23 Identity = 70/186 (37.63%), Postives = 98/186 (52.69%), Query Frame = 0 Query: 58 GGHGTSYSEKYFDGDRPAAM----YNKNVEWLRYAHFWWLYLGFVAFFVTLLRLTVLSKAEDWGMVLMVTHVVHNVVFFYLFHWIKGSPD--NFSQGEFNGLTLWEQIDDGIPWTKTKKLFFLIHTVLVFAASYVTDYDLNYLAMNGPVYILLGIIPKIPEMHRVRVFGWNKTTGIDDVNEDALAY 238 G H + R A M NKNV W+ F Y G + F+ + VL W V +VH + F + HWIKGSP+ + GE+ +T +EQIDDG PWT KK L+ T L+ AS ++YD L +N P++I+L I+ K+PE+H VR+FG N T GIDD ++ A+ Sbjct: 11 GFHSKKHLAATMSSSRSATMMEPCLNKNVNWMDSPGFAAFY-GILLLFIYTIVTMVLPATWSWTGV----SIVHGFISFMIMHWIKGSPEEGSMGSGEYREMTFYEQIDDGRPWTWVKKFLILVPTALLLLASVSSNYDTTQLFINCPIWIVL-ILAKLPELHGVRLFGINGTVGIDDDAKNHFAH 190
BLAST of NO02G03060 vs. NCBI_GenBank
Match: XP_012201915.1 (hypothetical protein SPRG_07067 [Saprolegnia parasitica CBS 223.65] >KDO27478.1 hypothetical protein SPRG_07067 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 117.9 bits (294), Expect = 4.700e-23 Identity = 64/161 (39.75%), Postives = 93/161 (57.76%), Query Frame = 0 Query: 79 NKNVEWLRYAHFWWLYLGFVAFFVTLLRLTVLSKAEDWGMVLMVTHVVHNVVFFYLFHWIKGSPD--NFSQGEFNGLTLWEQIDDGIPWTKTKKLFFLIHTVLVFAASYVTDYDLNYLAMNGPVYILLGIIPKIPEMHRVRVFGWNKTTGIDDVNEDALAY 238 NKNV W+ F Y G + F+ + VL W V +VH + F + HWIKGSP+ + GE+ +T +EQIDDG PWT KK L+ T L+ AS ++YD L +N P++I+L ++ K+PE+H VR+FG N T GIDD ++ +A+ Sbjct: 15 NKNVNWMDSPGFAAFY-GILLLFIYTIVTMVLPATWSWTGV----SIVHGFISFMIMHWIKGSPEEGSMGSGEYREMTFYEQIDDGRPWTWVKKFLILVPTALLLLASVSSNYDTTQLFINCPIWIIL-VLAKLPELHGVRLFGINGTVGIDDDAKNHVAH 169
BLAST of NO02G03060 vs. NCBI_GenBank
Match: OQR81182.1 (ORM1-like protein [Achlya hypogyna]) HSP 1 Score: 117.5 bits (293), Expect = 6.200e-23 Identity = 65/153 (42.48%), Postives = 89/153 (58.17%), Query Frame = 0 Query: 79 NKNVEWLRYAHFWWLYLGFVAFFVTLLRLTVLSKAEDWGMVLMVTHVVHNVVFFYLFHWIKGSPDN--FSQGEFNGLTLWEQIDDGIPWTKTKKLFFLIHTVLVFAASYVTDYDLNYLAMNGPVYILLGIIPKIPEMHRVRVFGWNKTTGIDD 230 NKNV W+ F Y GF+ F+ TVL + W V ++VH + F + HWIKGSP+ G + +T +EQIDDG PWT KK L+ T L+ AS ++YD L +N P++I+L I+ K+PE+H VR+FG N T GIDD Sbjct: 7 NKNVNWMDSPGFTAFY-GFLLLFIYAAVKTVLPASWSWTGV----NIVHGFISFIIMHWIKGSPEEGPTDAGLYREMTFFEQIDDGRPWTWVKKFLILVPTALLLLASVSSNYDTTQLCINCPIWIVL-ILAKLPELHGVRLFGINGTVGIDD 153
BLAST of NO02G03060 vs. NCBI_GenBank
Match: OQS00160.1 (hypothetical protein THRCLA_06180 [Thraustotheca clavata]) HSP 1 Score: 114.0 bits (284), Expect = 6.800e-22 Identity = 66/159 (41.51%), Postives = 89/159 (55.97%), Query Frame = 0 Query: 79 NKNVEWLRYAHFWWLYLGFVAFFVTLLRLTVLSKAEDWGMVLMVTHVVHNVVFFYLFHWIKGSPDN--FSQGEFNGLTLWEQIDDGIPWTKTKKLFFLIHTVLVFAASYVTDYDLNYLAMNGPVYILLGIIPKIPEMHRVRVFGWNKTTGIDDVNEDAL 236 NKNV W+ F Y F+ + TV+ W V ++VH VV F + HWIKGSP++ G + LT +EQIDDG PWT KK L+ T L+ AS ++YD L +N P++I+L I+ K+PE+H VR+FG N T GIDD L Sbjct: 9 NKNVNWMDSPGFAAFY-AITLLFIYVAVQTVVPLNWSWTGV----NIVHGVVSFVIMHWIKGSPEDGPNDSGLYRELTFYEQIDDGRPWTWVKKFLILVPTALLLLASVSSNYDTKQLFINCPIWIVL-ILAKLPELHGVRLFGINGTVGIDDAESKKL 161
BLAST of NO02G03060 vs. NCBI_GenBank
Match: XP_005644615.1 (ORMDL-domain-containing protein [Coccomyxa subellipsoidea C-169] >EIE20071.1 ORMDL-domain-containing protein [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 112.8 bits (281), Expect = 1.500e-21 Identity = 61/147 (41.50%), Postives = 83/147 (56.46%), Query Frame = 0 Query: 79 NKNVEWLRYAHFWWLYLGFVAFFVTLLRL--TVLSKAEDWGMVLMVTHVVHNVVFFYLFHWIKGSPDNFSQGEFNGLTLWEQIDDGIPWTKTKKLFFLIHTVLVFAASYVTDYDLNYLAMNGPVYILLGIIPKIPEMHRVRVFGWNK 224 NKNVEWL W F V L+ L +LS D G+ H++H V+ +YL HW KGSP QG+++ LT WEQ+DDG+ T T+K L+ L A++ TDY L +N V ++L +I K P MH+VR+FG NK Sbjct: 31 NKNVEWLSAPEAW-------TFIVALICLGWLILSLFMDSGLAWTYVHLLHGVITYYLLHWNKGSPVQMDQGKYDSLTFWEQLDDGVQNTNTRKFLTLVPVALFLLATHGTDYRRQPLGLNLIVLLVL-VIAKFPAMHKVRIFGINK 169
BLAST of NO02G03060 vs. NCBI_GenBank
Match: XP_008869323.1 (hypothetical protein H310_06151 [Aphanomyces invadans] >ETW02718.1 hypothetical protein H310_06151 [Aphanomyces invadans]) HSP 1 Score: 112.5 bits (280), Expect = 2.000e-21 Identity = 62/154 (40.26%), Postives = 90/154 (58.44%), Query Frame = 0 Query: 79 NKNVEWLRYAHFWWLYLGFVAFFVTLLRLTVLSKAEDWGMVLMVTHVVHNVVFFYLFHWIKGSPDNFSQ---GEFNGLTLWEQIDDGIPWTKTKKLFFLIHTVLVFAASYVTDYDLNYLAMNGPVYILLGIIPKIPEMHRVRVFGWNKTTGIDD 230 N+NV W+ F Y+ F + ++ T++ W V ++VH F HWIKGSPD G++ LT +EQIDDG PWT KK ++ TVL+ AS +++YD L +N PV+++L I+ K+PE+H VR+FG N+T GIDD Sbjct: 15 NRNVNWMDSPGFMGFYV-ITLFLIYIIVHTIMPVDWAWTSV----NIVHGFFSFVAMHWIKGSPDEDPSSLGGQYRELTFYEQIDDGRPWTWIKKFLIVVPTVLLLWASVMSNYDTIQLLINVPVWVVL-ILAKLPELHGVRLFGINRTVGIDD 162
BLAST of NO02G03060 vs. NCBI_GenBank
Match: XP_021757725.1 (uncharacterized protein C119.09c-like [Chenopodium quinoa]) HSP 1 Score: 112.5 bits (280), Expect = 2.000e-21 Identity = 58/144 (40.28%), Postives = 87/144 (60.42%), Query Frame = 0 Query: 79 NKNVEWLRYAHFWWLYLGFVAFFVTLLRLTVLSKAEDWGMVLMVTHVVHNVVFFYLFHWIKGSPDNFSQGEFNGLTLWEQIDDGIPWTKTKKLFFLIHTVLVFAASYVTDYDLNYLAMNGPVYILLGIIPKIPEMHRVRVFGWN 223 NKN EW+ Y W +Y+ F+ FF LL L++L + G+ + H+ H +V ++ FHW KG+P + QG +NGLT WEQI++G T+ +K F ++ +L AS+ TDY L +N +L ++ K P MHRVR+FG N Sbjct: 12 NKNTEWVDYPGLWSIYI-FILFFSWLLILSLLGCSS--GLAWTIVHLSHFIVTYHFFHWKKGTPFSEDQGIYNGLTWWEQIENGQQLTRNRKFFTVVPVLLYLIASHTTDYQNPMLFLNTLAVFVL-VVAKFPRMHRVRIFGIN 151
BLAST of NO02G03060 vs. NCBI_GenBank
Match: XP_010676855.1 (PREDICTED: uncharacterized protein C119.09c [Beta vulgaris subsp. vulgaris] >KMT12431.1 hypothetical protein BVRB_5g103630 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 111.3 bits (277), Expect = 4.400e-21 Identity = 60/149 (40.27%), Postives = 84/149 (56.38%), Query Frame = 0 Query: 74 PAAMYNKNVEWLRYAHFWWLYLGFVAFFVTLLRLTVLSKAEDWGMVLMVTHVVHNVVFFYLFHWIKGSPDNFSQGEFNGLTLWEQIDDGIPWTKTKKLFFLIHTVLVFAASYVTDYDLNYLAMNGPVYILLGIIPKIPEMHRVRVFGWN 223 P NKN EW+ Y W +Y+ F+ FF LL L++L + GM + H+ H V ++ FHW KG+P QG +NGLT WEQI++G T+ +K ++ VL AS+ TDY L N +L ++ K P MHRVR+FG N Sbjct: 12 PPKDVNKNTEWVTYPGVWTIYI-FIVFFAWLLVLSLLGCSP--GMAWTIVHLSHFFVTYHCFHWKKGTPFADDQGMYNGLTWWEQIENGQQLTRNRKFLTVVPVVLYLIASHTTDYQNPMLIFNTLAVFVL-VVAKFPHMHRVRIFGIN 156
BLAST of NO02G03060 vs. NCBI_GenBank
Match: GAQ77913.1 (ORMDL family protein [Klebsormidium nitens]) HSP 1 Score: 110.9 bits (276), Expect = 5.800e-21 Identity = 63/155 (40.65%), Postives = 87/155 (56.13%), Query Frame = 0 Query: 69 FDGDRPAAMYNKNVEWLRYAHFWWLYLGFVAFFVTLLRLTVLSKAEDWGMVLMVTHVVHNVVFFYLFHWIKGSPDNFSQGEFNGLTLWEQIDDGIPWTKTKKLFFLIHTVLVFAASYVTDY-DLNYLAMNGPVYILLGIIPKIPEMHRVRVFGWN 223 F D PA + NKN WL Y W Y+ + F + L V G+ H++H V+ FYL HW KGSP QG ++ LT+WEQIDDG+ +T+TKK F + VL AS+ TDY D + A+N +L ++ K P +H+VR+FG N Sbjct: 36 FHADPPADL-NKNTSWLLYPGIWTSYVLIIGF---VWMLFVSLGGVPSGLAWTYVHLLHFVITFYLLHWRKGSPFGEDQGIYDRLTMWEQIDDGVQFTRTKKFFTAVPVVLFLIASHATDYHDHPFFALNVLAVGIL-LLAKTPMLHKVRIFGIN 185 The following BLAST results are available for this feature:
BLAST of NO02G03060 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G03060 ID=NO02G03060|Name=NO02G03060|organism=Nannochloropsis oceanica|type=gene|length=1331bpback to top protein sequence of NO02G03060.1 >NO02G03060.1-protein ID=NO02G03060.1-protein|Name=NO02G03060.1|organism=Nannochloropsis oceanica|type=polypeptide|length=255bpback to top Synonyms
Publications
|