NO02G02960, NO02G02960 (gene) Nannochloropsis oceanica

Overview
NameNO02G02960
Unique NameNO02G02960
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1599
Alignment locationchr2:795897..797495 +

Link to JBrowse

Properties
Property NameValue
DescriptionRab18-family small gtpase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:795897..797495 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
GO:0016787hydrolase activity
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR001806Small_GTPase
Homology
[Close]
BLAST of NO02G02960 vs. NCBI_GenBank
Match: XP_005853740.1 (rab18 -family small gtpase, partial [Nannochloropsis gaditana CCMP526] >EKU22621.1 rab18 -family small gtpase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 392.1 bits (1006), Expect = 1.100e-105
Identity = 190/205 (92.68%), Postives = 199/205 (97.07%), Query Frame = 0 
Query:    1 MREPEPYDHLFKLLLIGDAGVGKSSILLRFTDDAFDDHQQSTIGVDFKVKMIEVGQKKIKMTIWDTAGQERFRTLTSSYYRGAQGIILVYDVNRRDSFENLNHWLQEVEVYSTGGGREIIKVLVGNKVDKDRLVPREEAEAWARSKGMLFLEASAKTRTGIKQVFQEVVQKILDNPALLTNTAPGRPRVSLQADAGAKVGGGYCC 206
            +REPEPYDHLFKLLLIGDAGVGKSSILLRFTDDAFDDHQQSTIGVDFKVKMIEV  K+IKMTIWDTAGQERFRTLTSSYYRGAQGIILVYDVNRR+SFENLNHWLQEVEVYSTGGGREI+KVLVGNKVDK+R+VPREEAEAWARSKGMLFLEASAKTRTGI+QVF EVVQKILDNP+LLTNTAPGRPRV+LQADA AK  GGYCC
Sbjct:   40 VREPEPYDHLFKLLLIGDAGVGKSSILLRFTDDAFDDHQQSTIGVDFKVKMIEVDHKRIKMTIWDTAGQERFRTLTSSYYRGAQGIILVYDVNRRESFENLNHWLQEVEVYSTGGGREIVKVLVGNKVDKERMVPREEAEAWARSKGMLFLEASAKTRTGIRQVFLEVVQKILDNPSLLTNTAPGRPRVNLQADAAAKGSGGYCC 244
[Close]
BLAST of NO02G02960 vs. NCBI_GenBank
Match: EWM30389.1 (rab family gtpase [Nannochloropsis gaditana])

HSP 1 Score: 379.8 bits (974), Expect = 5.400e-102
Identity = 185/198 (93.43%), Postives = 194/198 (97.98%), Query Frame = 0 
Query:    1 MREPEPYDHLFKLLLIGDAGVGKSSILLRFTDDAFDDHQQSTIGVDFKVKMIEVGQKKIKMTIWDTAGQERFRTLTSSYYRGAQGIILVYDVNRRDSFENLNHWLQEVEVYSTGGGREIIKVLVGNKVDKDRLVPREEAEAWARSKGMLFLEASAKTRTGIKQVFQEVVQKILDNPALLTNTAPGRPRVSLQADAGAK 199
            +REPEPYDHLFKLLLIGDAGVGKSSILLRFTDDAFDDHQQSTIGVDFKVKMIEV  K+IKMTIWDTAGQERFRTLTSSYYRGAQGIILVYDVNRR+SFENLNHWLQEVEVYSTGGGREI+KVLVGNKVDK+R+VPREEAEAWARSKGMLFLEASAKTRTGI+QVF EVVQKILDNP+LLTNTAPGRPRV+LQADA AK
Sbjct:   59 VREPEPYDHLFKLLLIGDAGVGKSSILLRFTDDAFDDHQQSTIGVDFKVKMIEVDHKRIKMTIWDTAGQERFRTLTSSYYRGAQGIILVYDVNRRESFENLNHWLQEVEVYSTGGGREIVKVLVGNKVDKERMVPREEAEAWARSKGMLFLEASAKTRTGIRQVFLEVVQKILDNPSLLTNTAPGRPRVNLQADAAAK 256
[Close]
BLAST of NO02G02960 vs. NCBI_GenBank
Match: CBJ33348.1 (Rab18, RAB family GTPase [Ectocarpus siliculosus])

HSP 1 Score: 317.0 bits (811), Expect = 4.300e-83
Identity = 152/206 (73.79%), Postives = 176/206 (85.44%), Query Frame = 0 
Query:    2 REPEPYDHLFKLLLIGDAGVGKSSILLRFTDDAFDDHQQSTIGVDFKVKMIEVGQKKIKMTIWDTAGQERFRTLTSSYYRGAQGIILVYDVNRRDSFENLNHWLQEVEVYSTGGGREIIKVLVGNKVDKDRLVPREEAEAWARSKGMLFLEASAKTRTGIKQVFQEVVQKILDNPALLTNTAPGRPR--VSLQADAGAKVGGGYCC 206
            R+ EPYDHLFKLLL+GDA VGKSSI+LRFTDD FDDH QSTIGVDFKVKM++ G K+IKMTIWDTAGQERFRTLTSSYYRGAQGI+LVYDV R ++F+NL+ WL+EVE Y  G GRE++K+LVGNKVDK+R+V R +AE +ARSKGMLFLEASAKT+ G+KQVF+EVVQKILDNP+LL NTAPGRPR  V        + GGG CC
Sbjct:    4 RQAEPYDHLFKLLLVGDAAVGKSSIMLRFTDDTFDDHLQSTIGVDFKVKMVDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPETFDNLSKWLEEVETYHPGRGREVVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLEASAKTKVGVKQVFEEVVQKILDNPSLLANTAPGRPRDTVDPSRPNPNQAGGGLCC 209
[Close]
BLAST of NO02G02960 vs. NCBI_GenBank
Match: XP_008610280.1 (rab family, other [Saprolegnia diclina VS20] >EQC36174.1 rab family, other [Saprolegnia diclina VS20])

HSP 1 Score: 310.5 bits (794), Expect = 4.000e-81
Identity = 152/208 (73.08%), Postives = 178/208 (85.58%), Query Frame = 0 
Query:    2 REPEPYDHLFKLLLIGDAGVGKSSILLRFTDDAFDDHQQSTIGVDFKVKMIEVGQKKIKMTIWDTAGQERFRTLTSSYYRGAQGIILVYDVNRRDSFENLNHWLQEVEVYSTGGGREIIKVLVGNKVDKDRLVPREEAEAWARSKGMLFLEASAKTRTGIKQVFQEVVQKILDNPALLTNTAP--GRPRVSLQAD---AGAKVGGGYC 205
            +E + YDHLFKLLL+GDAGVGKSS+LLRFT+D FDDH QSTIGVDFKVKM++V  K+IKMTIWDTAGQERFRTLTSSYYRGAQG+ILVYDV R+++FENL  WLQEVEVYS   GR+++K+LVGNK+DK+R+V R+E EAWARSKGMLF+E+SAKT+ GI+QVF EVVQKILDNPALL NTAP     +V+L AD   A A  GGG C
Sbjct:   22 QEVDSYDHLFKLLLVGDAGVGKSSMLLRFTEDTFDDHLQSTIGVDFKVKMMQVDGKRIKMTIWDTAGQERFRTLTSSYYRGAQGVILVYDVARKETFENLGTWLQEVEVYSPSNGRDVVKLLVGNKIDKERVVSRQEGEAWARSKGMLFVESSAKTKIGIQQVFNEVVQKILDNPALLANTAPRSRAKKVNLSADKYSANANAGGGCC 229
[Close]
BLAST of NO02G02960 vs. NCBI_GenBank
Match: XP_002899496.1 (Rab18 family GTPase, putative [Phytophthora infestans T30-4] >EEY61856.1 Rab18 family GTPase, putative [Phytophthora infestans T30-4])

HSP 1 Score: 310.1 bits (793), Expect = 5.300e-81
Identity = 152/199 (76.38%), Postives = 172/199 (86.43%), Query Frame = 0 
Query:    7 YDHLFKLLLIGDAGVGKSSILLRFTDDAFDDHQQSTIGVDFKVKMIEVGQKKIKMTIWDTAGQERFRTLTSSYYRGAQGIILVYDVNRRDSFENLNHWLQEVEVYSTGGGREIIKVLVGNKVDKDRLVPREEAEAWARSKGMLFLEASAKTRTGIKQVFQEVVQKILDNPALLTNTAPGRPRVSLQADAGAKVGGGYCC 206
            YDHLFKLLLIGDAGVGKSS+LLRFTDD FDD+ QSTIGVDFKVKM++V  KKIKMTIWDTAGQERFRTLTSSYYRGAQGI+LVYDV RRD+FENL+ WLQEVEVYS  GGR+++K+LVGNK+DK+R+V R EAE WARSKGMLF+E+SAKT+ GI+QVF EVVQKIL+NPALL+NTAP      L A A    GG  CC
Sbjct:    4 YDHLFKLLLIGDAGVGKSSMLLRFTDDTFDDNLQSTIGVDFKVKMMQVDGKKIKMTIWDTAGQERFRTLTSSYYRGAQGIVLVYDVARRDTFENLDLWLQEVEVYSPAGGRDVVKLLVGNKIDKERVVSRREAEDWARSKGMLFVESSAKTKIGIQQVFNEVVQKILENPALLSNTAPRSRGRKLDAKAEKSGGGNGCC 202
[Close]
BLAST of NO02G02960 vs. NCBI_GenBank
Match: XP_012206169.1 (hypothetical protein SPRG_11899 [Saprolegnia parasitica CBS 223.65] >KDO23052.1 hypothetical protein SPRG_11899 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 309.7 bits (792), Expect = 6.900e-81
Identity = 153/208 (73.56%), Postives = 177/208 (85.10%), Query Frame = 0 
Query:    2 REPEPYDHLFKLLLIGDAGVGKSSILLRFTDDAFDDHQQSTIGVDFKVKMIEVGQKKIKMTIWDTAGQERFRTLTSSYYRGAQGIILVYDVNRRDSFENLNHWLQEVEVYSTGGGREIIKVLVGNKVDKDRLVPREEAEAWARSKGMLFLEASAKTRTGIKQVFQEVVQKILDNPALLTNTAP--GRPRVSLQAD---AGAKVGGGYC 205
            +E + YDHLFKLLL+GDAGVGKSS+LLRFTDD FDDH QSTIGVDFKVKM++V  K+IKMTIWDTAGQERFRTLTSSYYRGAQGIILVYDV R+++FENL  WLQEVEVYS   GR+++K+LVGNK+DK+R+V R+E EAWARSKGMLF+E+SAKT+ GI+QVF EVVQKILDNPALL NTAP     +V+L AD     A  GGG C
Sbjct:    4 QEVDSYDHLFKLLLVGDAGVGKSSMLLRFTDDTFDDHLQSTIGVDFKVKMMQVDGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIILVYDVARKETFENLGTWLQEVEVYSPANGRDVVKLLVGNKIDKERVVSRQEGEAWARSKGMLFVESSAKTKIGIQQVFNEVVQKILDNPALLANTAPRSRAKKVNLSADKYAPHANAGGGCC 211
[Close]
BLAST of NO02G02960 vs. NCBI_GenBank
Match: OQS06605.1 (Rab18 family GTPase [Thraustotheca clavata])

HSP 1 Score: 309.7 bits (792), Expect = 6.900e-81
Identity = 153/205 (74.63%), Postives = 174/205 (84.88%), Query Frame = 0 
Query:    3 EPEPYDHLFKLLLIGDAGVGKSSILLRFTDDAFDDHQQSTIGVDFKVKMIEVGQKKIKMTIWDTAGQERFRTLTSSYYRGAQGIILVYDVNRRDSFENLNHWLQEVEVYSTGGGREIIKVLVGNKVDKDRLVPREEAEAWARSKGMLFLEASAKTRTGIKQVFQEVVQKILDNPALLTNTAP--GRPRVSLQADAGAKVGGGYCC 206
            E + YDHLFKLLL+GDAGVGKSS+LLRFT+D FDDH QSTIGVDFKVKMI V  K+IKMTIWDTAGQERFRTLTSSYYRGAQGI+LVYDV RR++FENL+ WLQEVEVYS   GR+++K+LVGNK+DK+R+V R+E EAWARSKGMLF+E+SAKT+ GI+QVF EVVQKILDNPALLTNTAP     RV L AD  A      CC
Sbjct:    5 EVDSYDHLFKLLLVGDAGVGKSSMLLRFTEDTFDDHLQSTIGVDFKVKMITVDGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIVLVYDVARRETFENLDTWLQEVEVYSPANGRDVVKLLVGNKIDKERVVARKEGEAWARSKGMLFVESSAKTKIGIQQVFNEVVQKILDNPALLTNTAPRTRAKRVELSADKYAANPNSGCC 209
[Close]
BLAST of NO02G02960 vs. NCBI_GenBank
Match: XP_008902505.1 (hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >XP_008902506.1 hypothetical protein, variant 3 [Phytophthora parasitica INRA-310] >XP_009526781.1 hypothetical protein PHYSODRAFT_314944 [Phytophthora sojae] >EGZ17723.1 hypothetical protein PHYSODRAFT_314944 [Phytophthora sojae] >ETI51534.1 hypothetical protein, variant 2 [Phytophthora parasitica P1569] >ETI51535.1 hypothetical protein, variant 3 [Phytophthora parasitica P1569] >ETK91433.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETK91434.1 hypothetical protein, variant 3 [Phytophthora parasitica] >ETL44843.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETL44844.1 hypothetical protein, variant 3 [Phytophthora parasitica] >ETL97998.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETL97999.1 hypothetical protein, variant 3 [Phytophthora parasitica] >ETM51159.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETM51160.1 hypothetical protein, variant 3 [Phytophthora parasitica] >ETN12548.1 hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >ETN12549.1 hypothetical protein, variant 3 [Phytophthora parasitica INRA-310] >ETO80295.1 hypothetical protein, variant 2 [Phytophthora parasitica P1976] >ETO80296.1 hypothetical protein, variant 3 [Phytophthora parasitica P1976] >ETP21322.1 hypothetical protein, variant 2 [Phytophthora parasitica CJ01A1] >ETP21323.1 hypothetical protein, variant 3 [Phytophthora parasitica CJ01A1] >ETP49248.1 hypothetical protein, variant 2 [Phytophthora parasitica P10297] >ETP49249.1 hypothetical protein, variant 3 [Phytophthora parasitica P10297] >KUF87741.1 Ras-related protein RABC1 [Phytophthora nicotianae] >OWZ02977.1 Rab18 family GTPase [Phytophthora megakarya])

HSP 1 Score: 308.5 bits (789), Expect = 1.500e-80
Identity = 151/199 (75.88%), Postives = 171/199 (85.93%), Query Frame = 0 
Query:    7 YDHLFKLLLIGDAGVGKSSILLRFTDDAFDDHQQSTIGVDFKVKMIEVGQKKIKMTIWDTAGQERFRTLTSSYYRGAQGIILVYDVNRRDSFENLNHWLQEVEVYSTGGGREIIKVLVGNKVDKDRLVPREEAEAWARSKGMLFLEASAKTRTGIKQVFQEVVQKILDNPALLTNTAPGRPRVSLQADAGAKVGGGYCC 206
            YDHLFKLLLIGDAGVGKSS+LLRFTDD FDD+ QSTIGVDFKVKM++V  KKIKMTIWDTAGQERFRTLTSSYYRGAQGI+LVYDV RRD+FENL+ WLQEVEVYS  GGR+++K+LVGNK+DK+R+V R EAE WARSKGMLF+E+SAKT+ GI+QVF EVVQKIL+NPALL+NTAP      L   A    GG  CC
Sbjct:    4 YDHLFKLLLIGDAGVGKSSMLLRFTDDTFDDNLQSTIGVDFKVKMMQVDGKKIKMTIWDTAGQERFRTLTSSYYRGAQGIVLVYDVARRDTFENLDLWLQEVEVYSPAGGRDVVKLLVGNKIDKERVVSRREAEDWARSKGMLFVESSAKTKIGIQQVFNEVVQKILENPALLSNTAPRSRGRKLDGKAEKSGGGSGCC 202
[Close]
BLAST of NO02G02960 vs. NCBI_GenBank
Match: XP_008902504.1 (hypothetical protein PPTG_09333 [Phytophthora parasitica INRA-310] >ETI51532.1 hypothetical protein F443_05130 [Phytophthora parasitica P1569] >ETK91431.1 hypothetical protein L915_04992 [Phytophthora parasitica] >ETL44841.1 hypothetical protein L916_04940 [Phytophthora parasitica] >ETL97996.1 hypothetical protein L917_04839 [Phytophthora parasitica] >ETM51157.1 hypothetical protein L914_04947 [Phytophthora parasitica] >ETN12546.1 hypothetical protein PPTG_09333 [Phytophthora parasitica INRA-310] >ETO80293.1 hypothetical protein F444_05167 [Phytophthora parasitica P1976] >ETP21320.1 hypothetical protein F441_05130 [Phytophthora parasitica CJ01A1] >ETP49246.1 hypothetical protein F442_05188 [Phytophthora parasitica P10297])

HSP 1 Score: 308.5 bits (789), Expect = 1.500e-80
Identity = 151/199 (75.88%), Postives = 171/199 (85.93%), Query Frame = 0 
Query:    7 YDHLFKLLLIGDAGVGKSSILLRFTDDAFDDHQQSTIGVDFKVKMIEVGQKKIKMTIWDTAGQERFRTLTSSYYRGAQGIILVYDVNRRDSFENLNHWLQEVEVYSTGGGREIIKVLVGNKVDKDRLVPREEAEAWARSKGMLFLEASAKTRTGIKQVFQEVVQKILDNPALLTNTAPGRPRVSLQADAGAKVGGGYCC 206
            YDHLFKLLLIGDAGVGKSS+LLRFTDD FDD+ QSTIGVDFKVKM++V  KKIKMTIWDTAGQERFRTLTSSYYRGAQGI+LVYDV RRD+FENL+ WLQEVEVYS  GGR+++K+LVGNK+DK+R+V R EAE WARSKGMLF+E+SAKT+ GI+QVF EVVQKIL+NPALL+NTAP      L   A    GG  CC
Sbjct:   25 YDHLFKLLLIGDAGVGKSSMLLRFTDDTFDDNLQSTIGVDFKVKMMQVDGKKIKMTIWDTAGQERFRTLTSSYYRGAQGIVLVYDVARRDTFENLDLWLQEVEVYSPAGGRDVVKLLVGNKIDKERVVSRREAEDWARSKGMLFVESSAKTKIGIQQVFNEVVQKILENPALLSNTAPRSRGRKLDGKAEKSGGGSGCC 223
[Close]
BLAST of NO02G02960 vs. NCBI_GenBank
Match: XP_024577763.1 (rab18 family [Plasmopara halstedii] >CEG41394.1 rab18 family [Plasmopara halstedii])

HSP 1 Score: 307.0 bits (785), Expect = 4.400e-80
Identity = 152/205 (74.15%), Postives = 177/205 (86.34%), Query Frame = 0 
Query:    3 EPEPYDHLFKLLLIGDAGVGKSSILLRFTDDAFDDHQQSTIGVDFKVKMIEVGQKKIKMTIWDTAGQERFRTLTSSYYRGAQGIILVYDVNRRDSFENLNHWLQEVEVYSTGGGREIIKVLVGNKVDKDRLVPREEAEAWARSKGMLFLEASAKTRTGIKQVFQEVVQKILDNPALLTNTAP---GRPRVSLQADAGAKVGGGYC 205
            E + YDHLFKLLLIGDAGVGKSS+LLRFTDD FDD+ QSTIGVDFKVKM++V  KKIKMTIWDTAGQERFRTLTSSYYRGAQGI+LVYDV RRD+FENL+ WLQEVEVYS  GGR+++K+LVGNK+DK+R+V R EAE WARSKGMLF+E+SAKT+ GI+QVF EVVQKIL+NPALL+NTAP   GR ++  +A+     G G C
Sbjct:   15 EMDGYDHLFKLLLIGDAGVGKSSMLLRFTDDTFDDNLQSTIGVDFKVKMMQVDGKKIKMTIWDTAGQERFRTLTSSYYRGAQGIVLVYDVARRDTFENLDLWLQEVEVYSPAGGRDVVKLLVGNKIDKERVVTRREAEDWARSKGMLFVESSAKTKIGIQQVFNEVVQKILENPALLSNTAPRSRGR-KLDGKAEKNGSAGNGCC 218
The following BLAST results are available for this feature:
BLAST of NO02G02960 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005853740.11.100e-10592.68rab18 -family small gtpase, partial [Nannochlorops... [more]
EWM30389.15.400e-10293.43rab family gtpase [Nannochloropsis gaditana][more]
CBJ33348.14.300e-8373.79Rab18, RAB family GTPase [Ectocarpus siliculosus][more]
XP_008610280.14.000e-8173.08rab family, other [Saprolegnia diclina VS20] >EQC3... [more]
XP_002899496.15.300e-8176.38Rab18 family GTPase, putative [Phytophthora infest... [more]
XP_012206169.16.900e-8173.56hypothetical protein SPRG_11899 [Saprolegnia paras... [more]
OQS06605.16.900e-8174.63Rab18 family GTPase [Thraustotheca clavata][more]
XP_008902505.11.500e-8075.88hypothetical protein, variant 2 [Phytophthora para... [more]
XP_008902504.11.500e-8075.88hypothetical protein PPTG_09333 [Phytophthora para... [more]
XP_024577763.14.400e-8074.15rab18 family [Plasmopara halstedii] >CEG41394.1 ra... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006943NSK006943Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G02960.1NO02G02960.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|627296gene_884Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Rab18gene297Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G02960.1NO02G02960.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G02960 ID=NO02G02960|Name=NO02G02960|organism=Nannochloropsis oceanica|type=gene|length=1599bp
TTCAGAGTTCTATGCTATATCTGTGTTGTGTGTGGGAGAGGGCTGATGAC
AATGAGAATGATTGAAAAAAGTGTGCTTCAGAGCGAGCAGGAGCCTCAAT
GAGTGAGGCAGCCGGAGTCTTCATCTCATTCCATGCCGTACGCCCGTCCC
GTACGCTAAGCAGAAGCCGGCAGACTTTTCGCTCTCCTTCCTCAAGATAC
AAGATAGGATCAGAGCACCAAGGTGGCTGCGTCGGCTCTCCCTGTCTGTC
CTCGATCACTTCGCCCGCCCCAAATTTATCGCCTCCCTAGGTGCTTGCTT
CATCTATCTCCCGTGTCAGAAAGTCTACCCCTCCTCTTTCCGTCCGAACA
ACCCACAGGCGCAACCACTGACACGAACCAAGCTGCCATGCGCGAGCCAG
AGCCGTACGACCATCTTTTCAAGCTTCTGCTTATAGGTGACGCAGGCGTG
GGGAAGTCGAGgtacgtcttgaggtcgtggagcgggaaagaggggcatgg
gaatgggcagtttgagaacgtcgtcttgggtaggggaactctgattcgag
gaaaggaggtggtgggcttgctgaataacacctttctggctgtaacactg
atatttggggtaggggtaggggccagcaatatggccgagagtcggaatgg
tcctcaggtgatgctgccgagcgaggcgcatattccgcggaacgcaatcg
aaagcccaaagcgccgcacaagaagtagcgctttcaaacctcgaggacgt
aaaaagttgatggctttatcaggcacttgggctcacacactcccgtcttc
cgtccatccctccctcccgtccttcaaaccccgtgcttacagCATCCTCC
TCCGCTTCACGGACGACGCCTTCGACGACCACCAGCAGTCCACCATCGGG
GTAGACTTTAAGGTGAAGATGATAGAGGTCGGGCAAAAGAAGATCAAGAT
GACGATCTGGGACACGGCGGGGCAAGAACGGTTTCGGACGTTGACCAGTT
CGTACTATCGCGGGGCTCAGGGAATTATTCTTGgtaaggttttggaggaa
ggagggagggagggaataggaagatggagggggggggaggtgaatgattg
agatgcagatcaggcggataatgaggagaggtatgagggaattaattcgt
ttttatgcaggttgctgttactaatcttgctccctccctctatcccctcc
cttcctccctccctcgtaagTATACGACGTGAATCGGCGGGACTCCTTCG
AGAATCTCAACCACTGGTTGCAAGAGGTGGAAGTTTATAGCACGGGCGGG
GGTCGTGAAATCATCAAGGTGCTGGTAGGAAACAAGGTAGATAAAGACAG
GTTGGTGCCACGGGAGGAAGCAGAGGCATGGGCACGGAGTAAAGGGATGC
TGTTCCTGGAGGCCAGCGCCAAGACAAGGACGGGGATCAAGCAGGTGTTC
CAGGAGGTGGTGCAGAAGATTCTCGATAACCCGGCTCTCTTGACGAATAC
CGCCCCCGGGCGGCCACGGGTTAGCTTGCAGGCAGATGCGGGGGCGAAGG
TGGGGGGGGGTTACTGCTGTTGATTTTGAGAACCACGGGAGGAGGGGGG
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protein sequence of NO02G02960.1

>NO02G02960.1-protein ID=NO02G02960.1-protein|Name=NO02G02960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=206bp
MREPEPYDHLFKLLLIGDAGVGKSSILLRFTDDAFDDHQQSTIGVDFKVK
MIEVGQKKIKMTIWDTAGQERFRTLTSSYYRGAQGIILVYDVNRRDSFEN
LNHWLQEVEVYSTGGGREIIKVLVGNKVDKDRLVPREEAEAWARSKGMLF
LEASAKTRTGIKQVFQEVVQKILDNPALLTNTAPGRPRVSLQADAGAKVG
GGYCC*
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