NO02G02950, NO02G02950 (gene) Nannochloropsis oceanica

Overview
NameNO02G02950
Unique NameNO02G02950
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2333
Alignment locationchr2:793942..796274 -

Link to JBrowse

Properties
Property NameValue
DescriptionMitochondrial-processing peptidase subunit beta
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:793942..796274 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0003824catalytic activity
GO:0004222metalloendopeptidase activity
GO:0016787hydrolase activity
GO:0005488binding
Vocabulary: Cellular Component
TermDefinition
GO:0017087mitochondrial processing peptidase complex
GO:0005739mitochondrion
Vocabulary: Biological Process
TermDefinition
GO:0006627protein processing involved in protein targeting to mitochondrion
GO:0019538protein metabolic process
GO:0016043cellular component organization
GO:0006810transport
Vocabulary: INTERPRO
TermDefinition
IPR011249Metalloenz_LuxS/M16
IPR037718MPP_beat
IPR007863Peptidase_M16_C
IPR011765Pept_M16_N
Homology
BLAST of NO02G02950 vs. NCBI_GenBank
Match: XP_005853738.1 (mitochondrial-processing peptidase subunit beta [Nannochloropsis gaditana CCMP526] >EKU22619.1 mitochondrial-processing peptidase subunit beta [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 831.2 bits (2146), Expect = 1.600e-237
Identity = 426/486 (87.65%), Postives = 445/486 (91.56%), Query Frame = 0
Query:    1 MKGRKELFQQLLRRRGAATASSGLILPPCVTASQGGRPLSALSGRSLEVIAPATEVTQLPSGLRVASE--TSHGETATVGVWIDAGSRYETAQNNGAAHFLEHMAFKGTNRRAQYDIEVEIENMGGHLNAYTSREQTVYYAKVFKGDVERAMDILSDILQHSVFDERAVTRERDVILREMEEVNKQKEEVILDYLHETAFQGTGLGRTILGPEENVKSLHREALQDYIKTHYTAPRMVIAGAGAIKHGRLVDLAQQYFGNLPLQAPPGADTGMDAAVFVGSDKRVFLPKEEESEAHVALAFRGAAWTSEFAFPLMVLQTIMGCWDRTSGASRQTSGRLGQAVAEKELCHSYVTFNTCYKDIGLFGLYAVVPPEKLKDFTTAMCEHLVRMAHDVTPAEVEKAKTQLKCTLLMQLDSFAHVCEDIGRQMLTYDRRMTPAEIFARIDAVQAEDVKATALAYIIDEDHALAAIGPVGGLPDYDWIRRQCL 485
            MK  K + Q L RRR A  ASS L+LP      +G R LSA  GRSLEV  PATEVT+L SGLRVASE  TSHGETATVGVWIDAGSRYETA NNGAAHFLEHMAFKGT RRAQYDIEVEIENMGGHLNAYTSREQTVYYAKVF+GDVERAMDILSDILQHSVFDERAV RERDVILREMEEVNKQKEEVILDYLHETAFQGTGLGRTILGPEENVKSLHREAL+DYI+THYTAPRMVIAGAGAI+HGRLV+LA +YFGNLP QAPPGADTGM+AAVFVGSDKRV    EEESEAHVALAFRGAAWTSEFAFPLMVLQTIMGCWDR+SGASRQ +GRLGQAV E+ELCHSYVTFNTCYKD+GLFGLYAVVPPEKL+DF+ AM EHLVRMAHDVTPAEVEKAKTQLKCTLLMQLDSFAHVCEDIGRQMLTY RRMTPAEIFARIDAVQAEDVKATA+AYI+DEDHALAAIGPV  LPDYDWIRRQCL
Sbjct:    1 MKCSKNVLQMLSRRRSA--ASSSLVLPG--PGIKGERFLSAYKGRSLEVNTPATEVTKLSSGLRVASEMQTSHGETATVGVWIDAGSRYETALNNGAAHFLEHMAFKGTQRRAQYDIEVEIENMGGHLNAYTSREQTVYYAKVFRGDVERAMDILSDILQHSVFDERAVMRERDVILREMEEVNKQKEEVILDYLHETAFQGTGLGRTILGPEENVKSLHREALKDYIRTHYTAPRMVIAGAGAIEHGRLVELADKYFGNLPRQAPPGADTGMEAAVFVGSDKRVH--SEEESEAHVALAFRGAAWTSEFAFPLMVLQTIMGCWDRSSGASRQMTGRLGQAVMERELCHSYVTFNTCYKDMGLFGLYAVVPPEKLRDFSGAMTEHLVRMAHDVTPAEVEKAKTQLKCTLLMQLDSFAHVCEDIGRQMLTYGRRMTPAEIFARIDAVQAEDVKATAMAYIVDEDHALAAIGPVANLPDYDWIRRQCL 480          
BLAST of NO02G02950 vs. NCBI_GenBank
Match: EWM30370.1 (putative mitochondrial-processing peptidase subunit beta [Nannochloropsis gaditana])

HSP 1 Score: 716.8 bits (1849), Expect = 4.400e-203
Identity = 353/383 (92.17%), Postives = 368/383 (96.08%), Query Frame = 0
Query:  102 MAFKGTNRRAQYDIEVEIENMGGHLNAYTSREQTVYYAKVFKGDVERAMDILSDILQHSVFDERAVTRERDVILREMEEVNKQKEEVILDYLHETAFQGTGLGRTILGPEENVKSLHREALQDYIKTHYTAPRMVIAGAGAIKHGRLVDLAQQYFGNLPLQAPPGADTGMDAAVFVGSDKRVFLPKEEESEAHVALAFRGAAWTSEFAFPLMVLQTIMGCWDRTSGASRQTSGRLGQAVAEKELCHSYVTFNTCYKDIGLFGLYAVVPPEKLKDFTTAMCEHLVRMAHDVTPAEVEKAKTQLKCTLLMQLDSFAHVCEDIGRQMLTYDRRMTPAEIFARIDAVQAEDVKATALAYIIDEDHALAAIGPVGGLPDYDWIRRQCL 485
            MAFKGT RRAQYDIEVEIENMGGHLNAYTSREQTVYYAKVF+GDVERAMDILSDILQHSVFDERAV RERDVILREMEEVNKQKEEVILDYLHETAFQGTGLGRTILGPEENVKSLHREAL+DYI+THYTAPRMVIAGAGAI+HGRLV+LA +YFGNLP QAPPGADTGM+AAVFVGSDKRV    EEESEAHVALAFRGAAWTSEFAFPLMVLQTIMGCWDR+SGASRQ +GRLGQAV E+ELCHSYVTFNTCYKD+GLFGLYAVVPPEKL+DF+ AM EHLVRMAHDVTPAEVEKAKTQLKCTLLMQLDSFAHVCEDIGRQMLTY RRMTPAEIFARIDAVQAEDVKATA+AYI+DEDHALAAIGPV  LPDYDWIRRQCL
Sbjct:    1 MAFKGTQRRAQYDIEVEIENMGGHLNAYTSREQTVYYAKVFRGDVERAMDILSDILQHSVFDERAVMRERDVILREMEEVNKQKEEVILDYLHETAFQGTGLGRTILGPEENVKSLHREALKDYIRTHYTAPRMVIAGAGAIEHGRLVELADKYFGNLPRQAPPGADTGMEAAVFVGSDKRVH--SEEESEAHVALAFRGAAWTSEFAFPLMVLQTIMGCWDRSSGASRQMTGRLGQAVMERELCHSYVTFNTCYKDMGLFGLYAVVPPEKLRDFSGAMTEHLVRMAHDVTPAEVEKAKTQLKCTLLMQLDSFAHVCEDIGRQMLTYGRRMTPAEIFARIDAVQAEDVKATAMAYIVDEDHALAAIGPVANLPDYDWIRRQCL 381          
BLAST of NO02G02950 vs. NCBI_GenBank
Match: OWZ20025.1 (Mitochondrial-processing peptidase subunit beta [Phytophthora megakarya])

HSP 1 Score: 585.5 bits (1508), Expect = 1.500e-163
Identity = 297/432 (68.75%), Postives = 343/432 (79.40%), Query Frame = 0
Query:   51 APATEVTQLPSGLRVASETSHGETATVGVWIDAGSRYETAQNNGAAHFLEHMAFKGTNRRAQYDIEVEIENMGGHLNAYTSREQTVYYAKVFKGDVERAMDILSDILQHSVFDERAVTRERDVILREMEEVNKQKEEVILDYLHETAFQGTGLGRTILGPEENVKSLHREALQDYIKTHYTAPRMVIAGAGAIKHGRLVDLAQQYFGNLPLQAPPGADTGMDAAVFVGSDKRVFLPKEEESEAHVALAFRGAAWTSEFAFPLMVLQTIMGCWDRTSGASRQTSGRLGQAVAEKELCHSYVTFNTCYKDIGLFGLYAVVPPEKLKDFTTAMCEHLVRMAHDVTPAEVEKAKTQLKCTLLMQLDSFAHVCEDIGRQMLTYDRRMTPAEIFARIDAVQAEDVKATALAYIIDEDHALAAIGPVGGLPDYDWIRRQ 483
            APATEVT LPSGLRVASE SHGETATVGVWI AGSRYETAQNNGAAHFLEHMAFKGT++R Q  +E+EIENMGGHLNAYTSREQTVYYAKVFK DV RAMDILSDILQ+S  DE A+ RERDVILREMEEVNKQ+EEV+ D LHETAF G GLGRTILGP EN+++L +  LQDYI THYTAPRMVIAGAGA++H +LV+LAQ+ FG+LP    P     ++   FVGSD RV    +    AHVA+AF G +WTSE +FPL+++QT++G WDRTSGA    S +LGQ VAEKEL HSY++FNTCY+D GLFG+YAV    KL D T    E LVR+ H  T  EVE+AKTQLK  +LMQLD  + +CEDIGRQMLTY RRMTPAEIFARIDAV A  V+ TA   I D++HALAA GP+  LPDY++IRR+
Sbjct:   33 APATEVTTLPSGLRVASEGSHGETATVGVWIGAGSRYETAQNNGAAHFLEHMAFKGTSKRTQQQLELEIENMGGHLNAYTSREQTVYYAKVFKKDVPRAMDILSDILQNSKLDEAAIERERDVILREMEEVNKQQEEVVFDRLHETAFMGNGLGRTILGPIENIRNLKKSDLQDYIATHYTAPRMVIAGAGAVEHSQLVELAQKSFGDLP--TTPAVAPTLEPVRFVGSDVRV--KDDSMPLAHVAIAFEGFSWTSEHSFPLLIMQTLLGSWDRTSGAGMNMSSKLGQVVAEKELAHSYMSFNTCYQDTGLFGVYAVADKYKLNDLTWYTMEALVRLVHKTTDDEVERAKTQLKANMLMQLDGSSPICEDIGRQMLTYGRRMTPAEIFARIDAVDAAAVRKTADEVINDKEHALAATGPIHELPDYNFIRRR 460          
BLAST of NO02G02950 vs. NCBI_GenBank
Match: XP_008904756.1 (hypothetical protein PPTG_10972 [Phytophthora parasitica INRA-310] >ETI47867.1 hypothetical protein F443_08007 [Phytophthora parasitica P1569] >ETL94375.1 hypothetical protein L917_07647 [Phytophthora parasitica] >ETM47595.1 hypothetical protein L914_07725 [Phytophthora parasitica] >ETN10319.1 hypothetical protein PPTG_10972 [Phytophthora parasitica INRA-310] >ETO76572.1 hypothetical protein F444_08052 [Phytophthora parasitica P1976] >ETP45686.1 hypothetical protein F442_07945 [Phytophthora parasitica P10297] >KUF85531.1 Mitochondrial-processing peptidase subunit beta [Phytophthora nicotianae])

HSP 1 Score: 583.9 bits (1504), Expect = 4.400e-163
Identity = 296/432 (68.52%), Postives = 342/432 (79.17%), Query Frame = 0
Query:   51 APATEVTQLPSGLRVASETSHGETATVGVWIDAGSRYETAQNNGAAHFLEHMAFKGTNRRAQYDIEVEIENMGGHLNAYTSREQTVYYAKVFKGDVERAMDILSDILQHSVFDERAVTRERDVILREMEEVNKQKEEVILDYLHETAFQGTGLGRTILGPEENVKSLHREALQDYIKTHYTAPRMVIAGAGAIKHGRLVDLAQQYFGNLPLQAPPGADTGMDAAVFVGSDKRVFLPKEEESEAHVALAFRGAAWTSEFAFPLMVLQTIMGCWDRTSGASRQTSGRLGQAVAEKELCHSYVTFNTCYKDIGLFGLYAVVPPEKLKDFTTAMCEHLVRMAHDVTPAEVEKAKTQLKCTLLMQLDSFAHVCEDIGRQMLTYDRRMTPAEIFARIDAVQAEDVKATALAYIIDEDHALAAIGPVGGLPDYDWIRRQ 483
            APATEVT LPSGLRVASE SHGETATVGVWI AGSRYETAQNNGAAHFLEHMAFKGT++R Q  +E+EIENMGGHLNAYTSREQTVYYAKVFK DV RAMDILSDILQ+S  DE A+ RERDVILREMEEVNKQ+EEV+ D LHETAF G GLGRTILGP EN+++L +  LQDYI THYTAPRMVIAGAGA+ H +LV+LAQ+ FG+LP    P     ++   F+GSD RV    +    AHVA+AF G +WTSE +FPL+++QT++G WDRTSGA    S +LGQ VAEKEL HSY++FNTCY+D GLFG+YAV    KL D T    E LVR+ H  T  EVE+AKTQLK  +LMQLD  + +CEDIGRQMLTY RRMTPAEIFARIDAV A  V+ TA   I D++HALAA GP+  LPDY++IRR+
Sbjct:   33 APATEVTTLPSGLRVASEGSHGETATVGVWIGAGSRYETAQNNGAAHFLEHMAFKGTSKRTQQQLELEIENMGGHLNAYTSREQTVYYAKVFKKDVPRAMDILSDILQNSKLDEAAIERERDVILREMEEVNKQQEEVVFDRLHETAFMGNGLGRTILGPIENIRNLKKSDLQDYIATHYTAPRMVIAGAGAVDHSQLVELAQKSFGDLP--TTPAVAPTLEPVRFLGSDVRV--KDDSMPLAHVAIAFEGFSWTSEHSFPLLIMQTLLGSWDRTSGAGMNMSSKLGQVVAEKELAHSYMSFNTCYQDTGLFGVYAVADKYKLNDLTWYTMEALVRLVHKTTDEEVERAKTQLKANMLMQLDGSSPICEDIGRQMLTYGRRMTPAEIFARIDAVDAAAVRKTADEVINDKEHALAATGPIHELPDYNFIRRR 460          
BLAST of NO02G02950 vs. NCBI_GenBank
Match: ETK87788.1 (hypothetical protein L915_07832 [Phytophthora parasitica] >ETL41207.1 hypothetical protein L916_07762 [Phytophthora parasitica] >ETP17695.1 hypothetical protein F441_07976 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 583.2 bits (1502), Expect = 7.600e-163
Identity = 296/432 (68.52%), Postives = 341/432 (78.94%), Query Frame = 0
Query:   51 APATEVTQLPSGLRVASETSHGETATVGVWIDAGSRYETAQNNGAAHFLEHMAFKGTNRRAQYDIEVEIENMGGHLNAYTSREQTVYYAKVFKGDVERAMDILSDILQHSVFDERAVTRERDVILREMEEVNKQKEEVILDYLHETAFQGTGLGRTILGPEENVKSLHREALQDYIKTHYTAPRMVIAGAGAIKHGRLVDLAQQYFGNLPLQAPPGADTGMDAAVFVGSDKRVFLPKEEESEAHVALAFRGAAWTSEFAFPLMVLQTIMGCWDRTSGASRQTSGRLGQAVAEKELCHSYVTFNTCYKDIGLFGLYAVVPPEKLKDFTTAMCEHLVRMAHDVTPAEVEKAKTQLKCTLLMQLDSFAHVCEDIGRQMLTYDRRMTPAEIFARIDAVQAEDVKATALAYIIDEDHALAAIGPVGGLPDYDWIRRQ 483
            APATEVT LPSGLRVASE SHGETATVGVWI AGSRYETAQNNGAAHFLEHMAFKGT++R Q  +E+EIENMGGHLNAYTSREQTVYYAKVFK DV RAMDILSDILQ+S  DE A+ RERDVILREMEEVNKQ+EEV+ D LHETAF G GLGRTILGP EN+++L +  LQDYI THYTAPRMVIAGAGA+ H +LV+LAQ  FG+LP    P     ++   F+GSD RV    +    AHVA+AF G +WTSE +FPL+++QT++G WDRTSGA    S +LGQ VAEKEL HSY++FNTCY+D GLFG+YAV    KL D T    E LVR+ H  T  EVE+AKTQLK  +LMQLD  + +CEDIGRQMLTY RRMTPAEIFARIDAV A  V+ TA   I D++HALAA GP+  LPDY++IRR+
Sbjct:   33 APATEVTTLPSGLRVASEGSHGETATVGVWIGAGSRYETAQNNGAAHFLEHMAFKGTSKRTQQQLELEIENMGGHLNAYTSREQTVYYAKVFKKDVPRAMDILSDILQNSKLDEAAIERERDVILREMEEVNKQQEEVVFDRLHETAFMGNGLGRTILGPIENIRNLKKSDLQDYIATHYTAPRMVIAGAGAVDHSQLVELAQTSFGDLP--TTPAVAPTLEPVRFLGSDVRV--KDDSMPLAHVAIAFEGFSWTSEHSFPLLIMQTLLGSWDRTSGAGMNMSSKLGQVVAEKELAHSYMSFNTCYQDTGLFGVYAVADKYKLNDLTWYTMEALVRLVHKTTDEEVERAKTQLKANMLMQLDGSSPICEDIGRQMLTYGRRMTPAEIFARIDAVDAAAVRKTADEVINDKEHALAATGPIHELPDYNFIRRR 460          
BLAST of NO02G02950 vs. NCBI_GenBank
Match: XP_002908827.1 (mitochondrial-processing peptidase subunit beta [Phytophthora infestans T30-4] >EEY57641.1 mitochondrial-processing peptidase subunit beta [Phytophthora infestans T30-4])

HSP 1 Score: 583.2 bits (1502), Expect = 7.600e-163
Identity = 295/432 (68.29%), Postives = 342/432 (79.17%), Query Frame = 0
Query:   51 APATEVTQLPSGLRVASETSHGETATVGVWIDAGSRYETAQNNGAAHFLEHMAFKGTNRRAQYDIEVEIENMGGHLNAYTSREQTVYYAKVFKGDVERAMDILSDILQHSVFDERAVTRERDVILREMEEVNKQKEEVILDYLHETAFQGTGLGRTILGPEENVKSLHREALQDYIKTHYTAPRMVIAGAGAIKHGRLVDLAQQYFGNLPLQAPPGADTGMDAAVFVGSDKRVFLPKEEESEAHVALAFRGAAWTSEFAFPLMVLQTIMGCWDRTSGASRQTSGRLGQAVAEKELCHSYVTFNTCYKDIGLFGLYAVVPPEKLKDFTTAMCEHLVRMAHDVTPAEVEKAKTQLKCTLLMQLDSFAHVCEDIGRQMLTYDRRMTPAEIFARIDAVQAEDVKATALAYIIDEDHALAAIGPVGGLPDYDWIRRQ 483
            APATEVT LPSGLRVASE SHGETATVGVWI AGSRYETAQNNGAAHFLEHMAFKGT++R Q  +E+EIENMGGHLNAYTSREQTVYYAKVFK DV RAMDILSDILQ+S  DE A+ RERDVILREMEEVNKQ+EEVI D LHETAF G GLGRTILGP EN+++L +  LQDYI THYTAPRMVIAGAGA+ H +LV+LAQ+ FG+LP    P     ++   F+GSD R+    +    AHVA+AF G +WTSE +FPL+++QT++G WDRTSGA    S +LGQ VAEKEL HSY++FNTCY+D GLFG+YAV    KL D T    E LVR+ H  T  EVE+AKTQLK  +LMQLD  + +CEDIGRQMLTY RRMTPAEIFARIDAV A  V+ TA   + D++HALAA GP+  LPDY++IRR+
Sbjct:   33 APATEVTTLPSGLRVASEGSHGETATVGVWIGAGSRYETAQNNGAAHFLEHMAFKGTSKRTQQQLELEIENMGGHLNAYTSREQTVYYAKVFKKDVPRAMDILSDILQNSKLDEAAIERERDVILREMEEVNKQQEEVIFDRLHETAFMGNGLGRTILGPIENIRNLKKSDLQDYIATHYTAPRMVIAGAGAVDHSQLVELAQKSFGDLP--TTPAVAPTLEPVRFLGSDVRI--KDDSMPLAHVAIAFEGFSWTSEHSFPLLIMQTLLGSWDRTSGAGMNMSSKLGQVVAEKELAHSYMSFNTCYQDTGLFGVYAVADKYKLNDLTWYTMEALVRLVHKTTDDEVERAKTQLKANMLMQLDGSSPICEDIGRQMLTYGRRMTPAEIFARIDAVDAAAVRKTADEVVNDKEHALAATGPIHELPDYNFIRRR 460          
BLAST of NO02G02950 vs. NCBI_GenBank
Match: XP_009529851.1 (hypothetical protein PHYSODRAFT_545625 [Phytophthora sojae] >EGZ16102.1 hypothetical protein PHYSODRAFT_545625 [Phytophthora sojae])

HSP 1 Score: 582.0 bits (1499), Expect = 1.700e-162
Identity = 294/432 (68.06%), Postives = 341/432 (78.94%), Query Frame = 0
Query:   51 APATEVTQLPSGLRVASETSHGETATVGVWIDAGSRYETAQNNGAAHFLEHMAFKGTNRRAQYDIEVEIENMGGHLNAYTSREQTVYYAKVFKGDVERAMDILSDILQHSVFDERAVTRERDVILREMEEVNKQKEEVILDYLHETAFQGTGLGRTILGPEENVKSLHREALQDYIKTHYTAPRMVIAGAGAIKHGRLVDLAQQYFGNLPLQAPPGADTGMDAAVFVGSDKRVFLPKEEESEAHVALAFRGAAWTSEFAFPLMVLQTIMGCWDRTSGASRQTSGRLGQAVAEKELCHSYVTFNTCYKDIGLFGLYAVVPPEKLKDFTTAMCEHLVRMAHDVTPAEVEKAKTQLKCTLLMQLDSFAHVCEDIGRQMLTYDRRMTPAEIFARIDAVQAEDVKATALAYIIDEDHALAAIGPVGGLPDYDWIRRQ 483
            APATEVT LPSGLRVASE SHGETATVGVWI AGSRYET QNNGAAHFLEHMAFKGT++R Q  +E+EIENMGGHLNAYTSREQTVYYAKVFK DV RAMDILSDILQ+S  DE A+ RERDVILREMEEVNKQ+EEV+ D LHETAF G GLGRTILGP EN+++L +  LQDYI THYTAPRMVIAGAGA+ H +LV+LAQ+ FG+LP    P     ++   FVGSD RV    +    AH+A+AF G +WTSE +FPL+++QT++G WDRTSGA    S +LGQ +AEKEL HSY++FNTCY+D GLFG+YAV    KL D T    E LVR+ H  T  EVE+AKTQLK  +LMQLD  + +CEDIGRQMLTY RRMTPAEIFARIDAV A  V+ TA   I D++HALAA GP+  LPDY++IRR+
Sbjct:   33 APATEVTTLPSGLRVASEGSHGETATVGVWIGAGSRYETTQNNGAAHFLEHMAFKGTSKRTQQQLELEIENMGGHLNAYTSREQTVYYAKVFKKDVPRAMDILSDILQNSKLDEAAIERERDVILREMEEVNKQQEEVVFDRLHETAFMGNGLGRTILGPIENIRNLKKSDLQDYIATHYTAPRMVIAGAGAVDHSQLVELAQKSFGDLP--TTPAVAPTLEPVRFVGSDVRV--KDDSMPLAHLAIAFEGFSWTSEHSFPLLIMQTLLGSWDRTSGAGMNMSSKLGQVIAEKELAHSYMSFNTCYQDTGLFGVYAVADKYKLNDLTWYTMEALVRLVHKTTDEEVERAKTQLKANMLMQLDGSSPICEDIGRQMLTYGRRMTPAEIFARIDAVDAAAVRKTADEVINDKEHALAATGPIHELPDYNFIRRR 460          
BLAST of NO02G02950 vs. NCBI_GenBank
Match: POM79070.1 (Mitochondrial-processing peptidase subunit beta [Phytophthora palmivora var. palmivora])

HSP 1 Score: 582.0 bits (1499), Expect = 1.700e-162
Identity = 295/432 (68.29%), Postives = 342/432 (79.17%), Query Frame = 0
Query:   51 APATEVTQLPSGLRVASETSHGETATVGVWIDAGSRYETAQNNGAAHFLEHMAFKGTNRRAQYDIEVEIENMGGHLNAYTSREQTVYYAKVFKGDVERAMDILSDILQHSVFDERAVTRERDVILREMEEVNKQKEEVILDYLHETAFQGTGLGRTILGPEENVKSLHREALQDYIKTHYTAPRMVIAGAGAIKHGRLVDLAQQYFGNLPLQAPPGADTGMDAAVFVGSDKRVFLPKEEESEAHVALAFRGAAWTSEFAFPLMVLQTIMGCWDRTSGASRQTSGRLGQAVAEKELCHSYVTFNTCYKDIGLFGLYAVVPPEKLKDFTTAMCEHLVRMAHDVTPAEVEKAKTQLKCTLLMQLDSFAHVCEDIGRQMLTYDRRMTPAEIFARIDAVQAEDVKATALAYIIDEDHALAAIGPVGGLPDYDWIRRQ 483
            APATEVT LPSGLRVASE SHGETATVGVWI AGSRYETA+NNGAAHFLEHMAFKGT++R Q  +E+EIENMGGHLNAYTSREQTVYYAKVFK DV RAMDILSDILQ+S  DE A+ RERDVILREMEEVNKQ+EEV+ D LHETAF G GLGRTILGP EN+++L +  LQDYI THYTAPRMVIAGAGA+ H +LV+LAQ+ FG+LP    P     ++   FVGSD RV    +    AHVA+AF G +WTSE +FPL+++QT++G WDRTSGA    S +LGQ VAEKEL HSY++FNTCY+D GLFG+YAV    KL D T    E LVR+ H  +  EVE+AKTQLK  +LMQLD  + +CEDIGRQMLTY RRMTPAEIFARIDAV A  V+ TA   I D++HALAA GP+  LPDY++IRR+
Sbjct:   33 APATEVTTLPSGLRVASEGSHGETATVGVWIGAGSRYETAKNNGAAHFLEHMAFKGTSKRTQQQLELEIENMGGHLNAYTSREQTVYYAKVFKKDVPRAMDILSDILQNSKLDEAAIERERDVILREMEEVNKQQEEVVFDRLHETAFMGNGLGRTILGPIENIRNLKKSDLQDYIATHYTAPRMVIAGAGAVDHSQLVELAQKSFGDLP--TTPAVAPTLEPVRFVGSDVRV--KDDSMPLAHVAIAFEGFSWTSEHSFPLLIMQTLLGSWDRTSGAGMNMSSKLGQVVAEKELAHSYMSFNTCYQDTGLFGVYAVADKYKLNDLTWYTMEALVRLVHKTSDEEVERAKTQLKANMLMQLDGSSPICEDIGRQMLTYGRRMTPAEIFARIDAVDAAAVRKTADEVINDKEHALAATGPIHELPDYNFIRRR 460          
BLAST of NO02G02950 vs. NCBI_GenBank
Match: CCI44798.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 580.1 bits (1494), Expect = 6.400e-162
Identity = 293/437 (67.05%), Postives = 338/437 (77.35%), Query Frame = 0
Query:   46 SLEVIAPATEVTQLPSGLRVASETSHGETATVGVWIDAGSRYETAQNNGAAHFLEHMAFKGTNRRAQYDIEVEIENMGGHLNAYTSREQTVYYAKVFKGDVERAMDILSDILQHSVFDERAVTRERDVILREMEEVNKQKEEVILDYLHETAFQGTGLGRTILGPEENVKSLHREALQDYIKTHYTAPRMVIAGAGAIKHGRLVDLAQQYFGNLPLQAPPGADTGMDAAVFVGSDKRVFLPKEEESEAHVALAFRGAAWTSEFAFPLMVLQTIMGCWDRTSGASRQTSGRLGQAVAEKELCHSYVTFNTCYKDIGLFGLYAVVPPEKLKDFTTAMCEHLVRMAHDVTPAEVEKAKTQLKCTLLMQLDSFAHVCEDIGRQMLTYDRRMTPAEIFARIDAVQAEDVKATALAYIIDEDHALAAIGPVGGLPDYDWIRRQ 483
            S  + APATEVT LPSGLRVASE SHGETATVGVWI AGSRYET +NNGAAHFLEHMAFKGT RR Q  +E+EIENMGGHLNAYTSREQTVYYAKVFK D+ RA+DILSDILQ+S  DE A+ RERDVILREMEEVNKQ EEV+ D LHETA+ G GLGRTILGP+EN++SL ++ L+DYI THYTA RMVIAGAGAI H  LV LA++ FGNLP          +D A F+GSD RV  P + ES  HVALAF G +WTSE+AFPL+++QT++G WDRT GA   +S +LGQAVAE EL HSY  FNTCY D GLFG+YAV  P KL DF     E LVR+ H  T  EVE+AK QLK ++LMQLD  + +CEDIGRQ+LTY RR+TPAEIF RID V A  V+ TA   I D+ HALAA+GPV  LPDY +IR++
Sbjct:   28 SYVINAPATEVTTLPSGLRVASEGSHGETATVGVWIGAGSRYETEKNNGAAHFLEHMAFKGTCRRTQQQLEMEIENMGGHLNAYTSREQTVYYAKVFKKDIPRALDILSDILQNSRLDEIAIARERDVILREMEEVNKQHEEVVFDRLHETAYMGNGLGRTILGPQENIRSLSKQDLRDYIATHYTADRMVIAGAGAIDHQELVQLAEKSFGNLPTTPSNSQAIKLDPARFIGSDIRV--PNDSESLVHVALAFEGFSWTSEYAFPLLIMQTLIGSWDRTDGAGLNSSSKLGQAVAEHELVHSYSAFNTCYHDTGLFGVYAVADPHKLNDFMWYTLESLVRLVHKTTEEEVERAKIQLKASMLMQLDGSSPICEDIGRQLLTYGRRLTPAEIFMRIDTVDATSVRRTATQVINDKAHALAAVGPVQELPDYAFIRKR 462          
BLAST of NO02G02950 vs. NCBI_GenBank
Match: CBJ28316.1 (Mitochondrial Processing Peptidase beta subunit (C-terminal region) Mitochondrial Processing Peptida [Ectocarpus siliculosus])

HSP 1 Score: 575.1 bits (1481), Expect = 2.100e-160
Identity = 284/435 (65.29%), Postives = 343/435 (78.85%), Query Frame = 0
Query:   52 PATEVTQLPSGLRVASETSHGETATVGVWIDAGSRYETAQNNGAAHFLEHMAFKGTNRRAQYDIEVEIENMGGHLNAYTSREQTVYYAKVFKGDVERAMDILSDILQHSVFDERAVTRERDVILREMEEVNKQKEEVILDYLHETAFQGTGLGRTILGPEENVKSLHREALQDYIKTHYTAPRMVIAGAGAIKHGRLVDLAQQYFGNLPLQAPPGADTGMDAAVFVGSDKRVFLPKEEESEAHVALAFRGAAWTSEFAFPLMVLQTIMGCWDRTSGASRQTSGRLGQAVA--EKELCHSYVTFNTCYKDIGLFGLYAVVPPEKLKDFTTAMCEHLVRMAHDVTPAEVEKAKTQLKCTLLMQLDSFAHVCEDIGRQMLTYDRRMTPAEIFARIDAVQAEDVKATALAYIIDEDHALAAIGPVGGLPDYDWIRRQCL 485
            P T+VT LP+GLRVASETSHG TA+VGVWIDAGSRYET +NNG AHFLEH+AFKGT +R Q  +E EIE+MG HLNAYTSREQTVYYAKVFK D+ R ++ILSDIL +S+ DE AV RERDVILREMEEVNKQ+EEVILD LHE  F+  GLGRTILGP EN++SL ++ L DYI THYTAPRMV+ GAGA++H  LV++A + FGNLP   P G+    D AVF G+DKRV   K  ESEA++ALAF+G++WT E AFPLM++QTIMG WDR+SGA+      LGQA+A   +E+CHSY TFNTCY D GLFG+YA+  PE L++ T  + EH+VRM   V   EVE+AKTQLK  +LMQLDSFA   E+IGR MLTY RRM  AE+FARIDA++AEDV+  A  ++ DEDHA+AA+GPVGGLPDYDW+R + +
Sbjct:   83 PETQVTTLPNGLRVASETSHGATASVGVWIDAGSRYETLENNGVAHFLEHVAFKGTRKRTQTQLETEIEDMGAHLNAYTSREQTVYYAKVFKEDLGRGLEILSDILMNSLIDEGAVHRERDVILREMEEVNKQQEEVILDNLHEVCFEKCGLGRTILGPAENIRSLSKQQLHDYITTHYTAPRMVVVGAGALEHEELVEMADRCFGNLPRDPPQGSIVTPDPAVFSGADKRVLNAK--ESEAYLALAFQGSSWTDEHAFPLMIMQTIMGGWDRSSGAN--VVPPLGQALAMSPREICHSYTTFNTCYNDTGLFGIYAIAQPEHLEELTGLVLEHMVRMCQHVGDEEVERAKTQLKTNMLMQLDSFAATIEEIGRHMLTYGRRMPAAEVFARIDAIEAEDVRVCANRFVNDEDHAMAALGPVGGLPDYDWVRNRTI 513          
The following BLAST results are available for this feature:
BLAST of NO02G02950 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005853738.11.600e-23787.65mitochondrial-processing peptidase subunit beta [N... [more]
EWM30370.14.400e-20392.17putative mitochondrial-processing peptidase subuni... [more]
OWZ20025.11.500e-16368.75Mitochondrial-processing peptidase subunit beta [P... [more]
XP_008904756.14.400e-16368.52hypothetical protein PPTG_10972 [Phytophthora para... [more]
ETK87788.17.600e-16368.52hypothetical protein L915_07832 [Phytophthora para... [more]
XP_002908827.17.600e-16368.29mitochondrial-processing peptidase subunit beta [P... [more]
XP_009529851.11.700e-16268.06hypothetical protein PHYSODRAFT_545625 [Phytophtho... [more]
POM79070.11.700e-16268.29Mitochondrial-processing peptidase subunit beta [P... [more]
CCI44798.16.400e-16267.05unnamed protein product [Albugo candida][more]
CBJ28316.12.100e-16065.29Mitochondrial Processing Peptidase beta subunit (C... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006942NSK006942Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G02950.1NO02G02950.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|574511gene_883Nannochloropsis oceanica (N. oceanica CCMP1779)gene
MPPgene296Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G02950.1NO02G02950.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G02950 ID=NO02G02950|Name=NO02G02950|organism=Nannochloropsis oceanica|type=gene|length=2333bp
GTTCGTGTCAGTGGTTGCGCCTGTGGGTTGTTCGGACGGAAAGAGGAGGG
GTAGACTTTCTGACACGGGAGATAGATGAAGCAAGCACCTAGGGAGGCGA
TAAATTTGGGGCGGGCGAAGTGATCGAGGACAGACAGGGAGAGCCGACGC
AGCCACCTTGGTGCTCTGATCCTATCTTGTATCTTGAGGAAGGAGAGCGA
AAAGTCTGCCGGCTTCTGCTTAGCGTACGGGACGGGCGTACGGCATGGAA
TGAGATGAAGACTCCGGCTGCCTCACTCATTGAGGCTCCTGCTCGCTCTG
AAGCACACTTTTTTCAATCATTCTCATTGTCATCAGCCCTCTCCCACACA
CAACACAGATATAGCATAGAACTCTGAAGCAATGAAGGGCAGGAAGGAGC
TTTTCCAGCAGCTCCTGCGCCGGAGGGGGGCAGCAACGGCCTCTTCAGGT
CTCATCTTGCCACCTTGTGTGACAGCTTCTCAGgtacgtggggaaaccag
ggcatagtatccaccgctattcccaccgcggcgtctatctttacacgtcc
ctgacacacatttgtccacattgccatcacacacacatgatatagGGCGG
ACGCCCCCTTTCGGCCTTGTCGGGCAGGAGTCTGGAGGTGATTGCGCCTG
CTACCGAAGTCACGCAACTACCAAGCGGCCTGCGCGTCGCATCCGAGgta
cgtaagactagaggatgcgacaatgtgtgcgtttggagtggggagaggtg
gccgcctctaatgcttcaatcctgtgtaccttcaatatacatgcgctttc
acctcgggtgtggcgctcacctggatgggggaaagccaaaaaggcatgcc
gaggcaggtcaacgcaaggcgcattccgctctgtgtaaagcgcgcctgca
cgtgtatctcatactattaaaagcgcggccagctgataaactctgacata
taatttggtgtatgcatctatcttataccctgtcccacacccttttacac
cacctcaaacagACCTCCCACGGCGAAACCGCCACAGTCGGCGTCTGGAT
CGACGCCGGCAGCCGGTACGAAACGGCACAAAACAACGGTGCAGCCCACT
TTCTCGAGCACATGGCTTTTAAAGGCACGAACCGTCGGGCGCAGTATGAT
ATTGAGGTGGAGATTGAAAACATGGGGGGGCATTTAAATGCTTATACCTC
ACGGGAACAGACCGTGTATTACGCAAAGGTATTCAAAGGGGACGTCGAGA
GGGCGATGGATATTCTGAGTGACATTTTGCAGCATTCAGTATTCGATGAA
CGGGCCGTCACGCGGGAGAGGGACGTGATCTTGAGGGAGATGGAGGAAGT
GAACAAGCAGAAGGAAGAGGTCATCTTGGATTACTTGCACGAGACAGCAT
TTCAGGGTACAGGGTTGGGGAGAACAATTCTGGGACCGGAGGAGAATGTG
AAGAGCCTGCATAGGGAAGCATTGCAGGACTATATCAAAACGCACTATAC
GGCACCTCGGATGGTGATTGCTGGGGCGGGGGCGATTAAGCATGGAAGAT
TGGTGGATTTGGCGCAGCAGTATTTTGGGAATTTACCGCTGCAGGCGCCT
CCCGGGGCGGATACGGGGATGGATGCTGCTGTGTTTGTGGGGAGTGACAA
AAGAGTGTTTTTACCGAAGGAGGAGGAGAGCGAGGCGCACGTAGCGTTGG
CGTTTCGGGGGGCGGCATGGACGTCGGAGTTCGCTTTTCCTTTGATGGTG
TTGCAGACGATTATGGGGTGTTGGGACAGGACGAGCGGGGCGAGTCGGCA
GACGAGCGGAAGGCTAGGCCAGGCGGTGGCGGAAAAGGAGTTGTGTCATT
CGTATGTAACGTTTAATACGTGCTATAAGGATATCGGGTTATTTGGCCTC
TATGCCGTGGTGCCACCGGAGAAGTTAAAGGACTTCACGACTGCCATGTG
CGAGCATCTGGTGCGGATGGCCCATGATGTCACTCCCGCGGAGGTGGAGA
AGGCAAAGACACAATTAAAGTGTACATTGCTGATGCAGTTGGACTCGTTT
GCGCATGTGTGTGAGGATATTGGGCGGCAGATGCTGACGTATGACAGACG
GATGACGCCTGCGGAGATTTTTGCGAGGATTGATGCAGTGCAGGCGGAGG
ATGTGAAAGCTACAGCGCTGGCTTACATTATAGATGAGGACCATGCCTTG
GCGGCGATAGGCCCTGTGGGCGGGTTGCCGGACTATGATTGGATTAGGCG
GCAGTGTTTGTAACGTCAGGTAGGGAGAAGGGAGGGGGGAAGAAGAAATA
TCAAGAAAAACAAGAAATGACGATGCTTCCGAA
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protein sequence of NO02G02950.1

>NO02G02950.1-protein ID=NO02G02950.1-protein|Name=NO02G02950.1|organism=Nannochloropsis oceanica|type=polypeptide|length=485bp
MKGRKELFQQLLRRRGAATASSGLILPPCVTASQGGRPLSALSGRSLEVI
APATEVTQLPSGLRVASETSHGETATVGVWIDAGSRYETAQNNGAAHFLE
HMAFKGTNRRAQYDIEVEIENMGGHLNAYTSREQTVYYAKVFKGDVERAM
DILSDILQHSVFDERAVTRERDVILREMEEVNKQKEEVILDYLHETAFQG
TGLGRTILGPEENVKSLHREALQDYIKTHYTAPRMVIAGAGAIKHGRLVD
LAQQYFGNLPLQAPPGADTGMDAAVFVGSDKRVFLPKEEESEAHVALAFR
GAAWTSEFAFPLMVLQTIMGCWDRTSGASRQTSGRLGQAVAEKELCHSYV
TFNTCYKDIGLFGLYAVVPPEKLKDFTTAMCEHLVRMAHDVTPAEVEKAK
TQLKCTLLMQLDSFAHVCEDIGRQMLTYDRRMTPAEIFARIDAVQAEDVK
ATALAYIIDEDHALAAIGPVGGLPDYDWIRRQCL*
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Synonyms
Publications