NO02G02800, NO02G02800 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G02800 vs. NCBI_GenBank
Match: OAY80749.1 (putative casein kinase II subunit beta-4 [Ananas comosus]) HSP 1 Score: 184.9 bits (468), Expect = 4.000e-43 Identity = 100/243 (41.15%), Postives = 133/243 (54.73%), Query Frame = 0 Query: 2 SDDSSHSSDDSGASWITSFCQEQQNQFFCEVERAFIEDGFNLYGLRPYVKHFKESLDIILDKKS-HSEDDGEDQGEYQENAELLYGMIHARYIITMHGMETMSRKYDRKDFGQCPRIMCEGQAVVPLGTKDDPYQDLVRIFCPRCQQVYNPPAFIGSRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVIRMDAAFIGTTFPHLFFMTFENKIPPPARDVYVPRVFGFKLHE 244 +D S+ DDS SWI+ FC + N+F CEV+ +I+D FNL GL+ V ++ +LD+ILD S + E DGE+ E + AELLYG+IHARYI+T G+ M KY R DFG+CPR+ C GQ +P+GT D P V+I+CP+C+ +Y P S MD A+IGTTFPHL+ MT+ + P A YVPRVFGFKLH+ Sbjct: 83 TDLSTSEGDDS--SWISWFCGLRGNEFLCEVDDDYIQDDFNLCGLQGQVNYYDYALDMILDNDSLNDEVDGEEHSEVESAAELLYGLIHARYILTGKGLNAMHEKYKRADFGRCPRVHCGGQPCLPVGTSDIPRNGSVKIYCPKCEDIYLPRCKYQS--------------------------------------------NMDGAYIGTTFPHLYLMTYPSAKPAKAVQKYVPRVFGFKLHK 279
BLAST of NO02G02800 vs. NCBI_GenBank
Match: XP_020111163.1 (casein kinase II subunit beta-3-like [Ananas comosus]) HSP 1 Score: 184.9 bits (468), Expect = 4.000e-43 Identity = 100/243 (41.15%), Postives = 133/243 (54.73%), Query Frame = 0 Query: 2 SDDSSHSSDDSGASWITSFCQEQQNQFFCEVERAFIEDGFNLYGLRPYVKHFKESLDIILDKKS-HSEDDGEDQGEYQENAELLYGMIHARYIITMHGMETMSRKYDRKDFGQCPRIMCEGQAVVPLGTKDDPYQDLVRIFCPRCQQVYNPPAFIGSRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVIRMDAAFIGTTFPHLFFMTFENKIPPPARDVYVPRVFGFKLHE 244 +D S+ DDS SWI+ FC + N+F CEV+ +I+D FNL GL+ V ++ +LD+ILD S + E DGE+ E + AELLYG+IHARYI+T G+ M KY R DFG+CPR+ C GQ +P+GT D P V+I+CP+C+ +Y P S MD A+IGTTFPHL+ MT+ + P A YVPRVFGFKLH+ Sbjct: 83 TDLSTSEGDDS--SWISWFCGLRGNEFLCEVDDDYIQDDFNLCGLQGQVNYYDYALDMILDNDSLNDEVDGEEHSEVESAAELLYGLIHARYILTGKGLNAMHEKYKRADFGRCPRVHCGGQPCLPVGTSDIPRNGSVKIYCPKCEDIYLPRCKYQS--------------------------------------------NMDGAYIGTTFPHLYLMTYPSTKPAKAVQKYVPRVFGFKLHK 279
BLAST of NO02G02800 vs. NCBI_GenBank
Match: AUZ41858.1 (casein kinase II subunit beta-like-1 [Musa itinerans]) HSP 1 Score: 184.1 bits (466), Expect = 6.900e-43 Identity = 93/240 (38.75%), Postives = 129/240 (53.75%), Query Frame = 0 Query: 8 SSDDSGASWITSFCQEQQNQFFCEVERAFIEDGFNLYGLRPYVKHFKESLDIILDKKSHSED-DGEDQGEYQENAELLYGMIHARYIITMHGMETMSRKYDRKDFGQCPRIMCEGQAVVPLGTKDDPYQDLVRIFCPRCQQVYNPPAFIGSRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVIRMDAAFIGTTFPHLFFMTFENKIPPPARDVYVPRVFGFKLHETNK 247 +SD+ +SWI+ FC + N+F CEV+ +I+D FNL GL+ + ++ +LD+ILD S S D DGE+ E + AELLYG+IHARY+ T G+ M KY + DFG+CPR+ C GQ +P+G D P+ VRI+CP+C VY P S MD A+IGTTFPHL+ MT+ + YVP+V+GFKLH+ +K Sbjct: 31 TSDEDASSWISWFCGLRGNEFLCEVDEDYIQDDFNLCGLQAQISYYDNALDMILDNDSFSGDIDGEENSEIEPAAELLYGLIHARYVATTRGLNAMHEKYKKADFGRCPRVFCGGQPCLPVGISDIPHSGSVRIYCPKCDDVYFPRCKYQS--------------------------------------------DMDGAYIGTTFPHLYLMTYPSAKSAMTVQHYVPKVYGFKLHKGSK 226
BLAST of NO02G02800 vs. NCBI_GenBank
Match: AUZ41849.1 (casein kinase II subunit beta-3-like protein [Musa acuminata AAA Group]) HSP 1 Score: 183.7 bits (465), Expect = 9.000e-43 Identity = 97/246 (39.43%), Postives = 131/246 (53.25%), Query Frame = 0 Query: 8 SSDDSGASWITSFCQEQQNQFFCEVERAFIEDGFNLYGLRPYVKHFKESLDIILDKKSHSED-DGEDQGEYQENAELLYGMIHARYIITMHGMETMSRKYDRKDFGQCPRIMCEGQAVVPLGTKDDPYQDLVRIFCPRCQQVYNPPAFIGSRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVIRMDAAFIGTTFPHLFFMTFENKIPPPARDVYVPRVFGFKLHETNKSRVFPT 253 +S+ +SWI+ FC + N+ CE++ I+D FNL GL+ V ++ +LD+ILD S S D DGE+ + + AE LYG+IHARYIIT G+ M KY + DFG CPR+ C GQ +P+GT D P+ V+I+CP+C+ VY P S MD A+IGTTFPHL+ MT+ PP YVP+VFGFKLH+ K R+F T Sbjct: 85 TSEGYDSSWISWFCGLRGNELLCEIDEDHIQDDFNLCGLQGLVPYYDYALDVILDNDSLSGDIDGEEHSQVESAAEQLYGLIHARYIITSRGLNAMHEKYKKADFGCCPRVFCGGQPCLPVGTSDIPHNGSVKIYCPKCEDVYFPRCKYQS--------------------------------------------NMDGAYIGTTFPHLYLMTYPTSKPPAEVQHYVPKVFGFKLHKGTK-RLFDT 285
BLAST of NO02G02800 vs. NCBI_GenBank
Match: XP_009404205.1 (PREDICTED: casein kinase II subunit beta-3 isoform X2 [Musa acuminata subsp. malaccensis]) HSP 1 Score: 183.3 bits (464), Expect = 1.200e-42 Identity = 93/240 (38.75%), Postives = 128/240 (53.33%), Query Frame = 0 Query: 8 SSDDSGASWITSFCQEQQNQFFCEVERAFIEDGFNLYGLRPYVKHFKESLDIILDKKSHSED-DGEDQGEYQENAELLYGMIHARYIITMHGMETMSRKYDRKDFGQCPRIMCEGQAVVPLGTKDDPYQDLVRIFCPRCQQVYNPPAFIGSRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVIRMDAAFIGTTFPHLFFMTFENKIPPPARDVYVPRVFGFKLHETNK 247 +S+ +SWI+ FC + N+ CE++ +I+D FNL GL+ V ++ +LD+ILD S S D DGE+ + + AE LYG+IHARYI+T G+ M KY + DFG CPR+ C GQ +P+GT D P+ V+I+CP+C+ VY P S MD A+IGTTFPHL+ MT+ PP YVP+VFGFKLH+ K Sbjct: 85 TSEGYDSSWISWFCGLRGNELLCEIDEDYIQDDFNLCGLQGLVPYYDYALDVILDNDSLSGDIDGEEHSQVESAAEQLYGLIHARYIVTSRGLNAMHEKYKKADFGCCPRVFCGGQPCLPVGTSDIPHNGSVKIYCPKCEDVYFPRCKYQS--------------------------------------------NMDGAYIGTTFPHLYLMTYPTSKPPAEVQHYVPKVFGFKLHKGTK 280
BLAST of NO02G02800 vs. NCBI_GenBank
Match: AUZ41861.1 (casein kinase II subunit beta-3-like protein [Musa itinerans]) HSP 1 Score: 182.6 bits (462), Expect = 2.000e-42 Identity = 93/240 (38.75%), Postives = 128/240 (53.33%), Query Frame = 0 Query: 8 SSDDSGASWITSFCQEQQNQFFCEVERAFIEDGFNLYGLRPYVKHFKESLDIILDKKSHSED-DGEDQGEYQENAELLYGMIHARYIITMHGMETMSRKYDRKDFGQCPRIMCEGQAVVPLGTKDDPYQDLVRIFCPRCQQVYNPPAFIGSRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVIRMDAAFIGTTFPHLFFMTFENKIPPPARDVYVPRVFGFKLHETNK 247 +S+ +SWI+ FC + N+ CE++ +I+D FNL GL+ V ++ +LD+ILD S S D DGE+ + + AE LYG+IHARYI+T G+ M KY + DFG CPR+ C GQ +P+GT D P+ V+I+CP+C+ VY P S MD A+IGTTFPHL+ MT+ PP YVP+VFGFKLH+ K Sbjct: 85 TSEGYDSSWISWFCGLRGNELLCEIDEDYIQDDFNLCGLQGLVPYYDYALDVILDNDSLSGDIDGEEHNQVESAAEQLYGLIHARYIVTSRGLNAMHEKYKKADFGCCPRVFCGGQPCLPVGTSDIPHNGSVKIYCPKCEDVYFPRCKYQS--------------------------------------------NMDGAYIGTTFPHLYLMTYPMSKPPAEVQHYVPKVFGFKLHKGTK 280
BLAST of NO02G02800 vs. NCBI_GenBank
Match: XP_006844752.1 (casein kinase II subunit beta-1 [Amborella trichopoda] >XP_011623504.1 casein kinase II subunit beta-1 [Amborella trichopoda] >ERN06427.1 hypothetical protein AMTR_s00016p00256100 [Amborella trichopoda]) HSP 1 Score: 181.8 bits (460), Expect = 3.400e-42 Identity = 98/244 (40.16%), Postives = 131/244 (53.69%), Query Frame = 0 Query: 2 SDDSSHSSDDSGASWITSFCQEQQNQFFCEVERAFIEDGFNLYGLRPYVKHFKESLDIILDKKSHS-EDDGEDQGEYQENAELLYGMIHARYIITMHGMETMSRKYDRKDFGQCPRIMCEGQAVVPLGTKDDPYQDLVRIFCPRCQQVYNPPAFIGSRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVIRMDAAFIGTTFPHLFFMTFENKIPPPARDVYVPRVFGFKLHET 245 +D SS DDS SWI+ FC+ + N+ CEV+ +I D FNL GL V ++ +LD+ILD S S E DGE+ E + AE+LYG+IHARYI+T G+ M KY R DFG+CPR+ C GQ +P+G+ D P V++FCP+C+ +Y P S MD A+IGTTFPHL+ +T+ N P YVPRVFGFKLH++ Sbjct: 78 TDLSSSEGDDS--SWISWFCRLRGNELLCEVDEDYIHDDFNLCGLPGQVPYYDYALDMILDNDSLSGEVDGEEHNEIESAAEILYGLIHARYILTSKGLAAMHEKYKRVDFGRCPRVYCGGQPCLPVGSSDIPRNGSVKLFCPKCEDIYFPRCKYQS--------------------------------------------NMDGAYIGTTFPHLYLLTYPNAKPAKPVQTYVPRVFGFKLHKS 275
BLAST of NO02G02800 vs. NCBI_GenBank
Match: CDY28980.1 (BnaA02g24960D [Brassica napus]) HSP 1 Score: 181.8 bits (460), Expect = 3.400e-42 Identity = 97/234 (41.45%), Postives = 128/234 (54.70%), Query Frame = 0 Query: 12 SGASWITSFCQEQQNQFFCEVERAFIEDGFNLYGLRPYVKHFKESLDIILD-KKSHSEDDGEDQGEYQEN-AELLYGMIHARYIITMHGMETMSRKYDRKDFGQCPRIMCEGQAVVPLGTKDDPYQDLVRIFCPRCQQVYNPPAFIGSRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVIRMDAAFIGTTFPHLFFMTFENKIPPPARDVYVPRVFGFKLHE 244 S SW++ FC + N+FFCEV+ +I+D FNL GL V +++ +LD+ILD + SH E E+Q E E+ AE+LYG+IHARYI+T G+ M KY DFG+CPR+ C GQ +P+G D P V+I+CP+CQ +Y P RS +D A+ GTTFPHLF MT+ N PP A YVPRVFGFKLH+ Sbjct: 87 SDTSWVSWFCNLKGNEFFCEVDDDYIQDDFNLCGLSSVVPYYEYALDLILDVESSHGEMFTEEQNELIESAAEMLYGLIHARYILTTKGLAAMLDKYKNYDFGRCPRVYCCGQPCLPVGQSDLPRSSTVKIYCPKCQDIYYP------RSKYQG--------------------------------------NIDGAYFGTTFPHLFLMTYGNLKPPKATQNYVPRVFGFKLHK 276
BLAST of NO02G02800 vs. NCBI_GenBank
Match: XP_009128933.1 (PREDICTED: casein kinase II subunit beta-1 isoform X1 [Brassica rapa]) HSP 1 Score: 181.8 bits (460), Expect = 3.400e-42 Identity = 97/234 (41.45%), Postives = 128/234 (54.70%), Query Frame = 0 Query: 12 SGASWITSFCQEQQNQFFCEVERAFIEDGFNLYGLRPYVKHFKESLDIILD-KKSHSEDDGEDQGEYQEN-AELLYGMIHARYIITMHGMETMSRKYDRKDFGQCPRIMCEGQAVVPLGTKDDPYQDLVRIFCPRCQQVYNPPAFIGSRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVIRMDAAFIGTTFPHLFFMTFENKIPPPARDVYVPRVFGFKLHE 244 S SW++ FC + N+FFCEV+ +I+D FNL GL V +++ +LD+ILD + SH E E+Q E E+ AE+LYG+IHARYI+T G+ M KY DFG+CPR+ C GQ +P+G D P V+I+CP+CQ +Y P RS +D A+ GTTFPHLF MT+ N PP A YVPRVFGFKLH+ Sbjct: 87 SDTSWVSWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSVVPYYEYALDLILDVESSHGEMFTEEQNELIESAAEMLYGLIHARYILTTKGLAAMLDKYKNYDFGRCPRVYCCGQPCLPVGQSDLPRSSTVKIYCPKCQDIYYP------RSKYQG--------------------------------------NIDGAYFGTTFPHLFLMTYGNLKPPKATQNYVPRVFGFKLHK 276
BLAST of NO02G02800 vs. NCBI_GenBank
Match: XP_010692009.1 (PREDICTED: putative casein kinase II subunit beta-4 isoform X1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 181.4 bits (459), Expect = 4.500e-42 Identity = 91/238 (38.24%), Postives = 130/238 (54.62%), Query Frame = 0 Query: 8 SSDDSGASWITSFCQEQQNQFFCEVERAFIEDGFNLYGLRPYVKHFKESLDIILD-KKSHSEDDGEDQGEYQEN-AELLYGMIHARYIITMHGMETMSRKYDRKDFGQCPRIMCEGQAVVPLGTKDDPYQDLVRIFCPRCQQVYNPPAFIGSRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVIRMDAAFIGTTFPHLFFMTFENKIPPPARDVYVPRVFGFKLHE 244 +SD +WI+ FC + N+FFCE++ +I+D FNL GL V ++ +LD+ILD + SH + E+Q E E+ AE+LYG+IH RYI+T GM M KY + +FG+CPRI C GQA +P+G D P V+I+CP+C+ +Y P + + +D A+ GTTFPHLF MT+ N +P A YVPR+FGFK+H+ Sbjct: 95 ASDGEDTAWISWFCNLRGNEFFCEIDDDYIQDDFNLCGLSSQVPYYDYALDVILDVESSHGDMFTEEQNELIESAAEMLYGLIHVRYILTSKGMAAMLDKYKKYEFGRCPRIYCSGQAALPVGPSDIPRSSTVKIYCPKCEDIYYPRSKYQGKD-------------------------------------------VDGAYFGTTFPHLFLMTYGNLLPTQATKTYVPRIFGFKVHK 289 The following BLAST results are available for this feature:
BLAST of NO02G02800 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G02800 ID=NO02G02800|Name=NO02G02800|organism=Nannochloropsis oceanica|type=gene|length=1980bpback to top protein sequence of NO02G02800.1 >NO02G02800.1-protein ID=NO02G02800.1-protein|Name=NO02G02800.1|organism=Nannochloropsis oceanica|type=polypeptide|length=327bpback to top Synonyms
Publications
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