NO02G02740, NO02G02740 (gene) Nannochloropsis oceanica

Overview
NameNO02G02740
Unique NameNO02G02740
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1111
Alignment locationchr2:749810..750920 -

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Properties
Property NameValue
DescriptionSentrin-specific protease 8
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:749810..750920 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008234cysteine-type peptidase activity
GO:0008234cysteine-type peptidase activity
GO:0008233peptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO:0006508proteolysis
Vocabulary: INTERPRO
TermDefinition
IPR038765Papain_like_cys_pep_sf
IPR003653Peptidase_C48
Homology
BLAST of NO02G02740 vs. NCBI_GenBank
Match: ETM54156.1 (hypothetical protein L914_02465 [Phytophthora parasitica])

HSP 1 Score: 153.3 bits (386), Expect = 1.000e-33
Identity = 89/232 (38.36%), Postives = 122/232 (52.59%), Query Frame = 0
Query:    7 LFNYHDDAQVTEGDQILFRPPGWLNDRCINFYFRVLEHEEFQDRPDLLFMDPAVVSCMLIQCTDQGELEEVGEGLKLDRRSMVFIPVNDAEDFRSDCTHWSLLVYSAGNGSSAQPGKFFHLDSSGGRNEPAAKRTAAQFWRMV--AGK-EGGXXXXKVEAVRGCPQQVNGYDCGMYVLIMTKYLAHLYVTEGGSEEGRERSPKLNTTRLAARVTPDAIDEARRRIGLKIEQL 236
            + NYH D Q+ E D  LF    WLND  +NFY + L   +     D+L MDPAVVSC+  QC D+ E +++  GL L  R +  IPV D +    D +HWSLL+Y        + G F H DSS G N+ AA+R A  F  ++  AG+ +G      VE V+  PQQ NGYDCGMYVL++ +Y              R  + ++ T  L    TP  + E R ++   IE+L
Sbjct:    5 VLNYH-DVQLYESDVALFAGRQWLNDNAVNFYLQYL--TQTVASRDVLLMDPAVVSCLQHQCEDEDEYQDLASGLNLTSRQLCIIPVTDNDSLGGDSSHWSLLLY--------RDGMFQHFDSSSGHNKHAARRVAEPFELLLQAAGRYDGDGASRHVEEVQDVPQQQNGYDCGMYVLVLAEYFC------------RRHAGEMETVSLDDYATPKRVTELRSQMPNLIERL 213          
BLAST of NO02G02740 vs. NCBI_GenBank
Match: ETO83377.1 (hypothetical protein F444_02585 [Phytophthora parasitica P1976])

HSP 1 Score: 152.1 bits (383), Expect = 2.200e-33
Identity = 89/235 (37.87%), Postives = 123/235 (52.34%), Query Frame = 0
Query:    7 LFNYHDDAQVTEGDQILFRPPGWLNDRCINFYFRVLEHEEFQDRPDLLFMDPAVVSCMLIQCTDQGELEEVGEGLKLDRRSMVFIPVNDAEDFRSDCTHWSLLVYSAGNGSSAQPGKFFHLDSSGGRNEPAAKRTAAQFWRMV--AGK-EGGXXXXKVEAVRGCPQQVNGYDCGMYVLIMTKYLAHLYVTEGGSEEGRERSPKLNTTRLAARVTPDAIDEARRRIGLKIEQLAAA 239
            + NYH D Q+ E D  LF    WLND  +NFY + L   +     D+L MDPAVVSC+  QC ++ E +++  GL L  R +  IPV D +    D +HWSLL+Y        + G F H DSS G N+ AA+R A  F  ++  AG+ +G      VE V+  PQQ NGYDCGMYVL++ +Y              R  + ++ T  L    TP  + E R ++   IE+L  A
Sbjct:    5 VLNYH-DVQLYESDVALFAGRQWLNDNAVNFYLQYL--TQTVASRDVLLMDPAVVSCLQHQCENEDEYQDLASGLNLTSRQLCIIPVTDNDSLGGDSSHWSLLLY--------RDGMFQHFDSSSGHNKHAARRVAEPFELLLQAAGRYDGDGASRHVEEVQDVPQQQNGYDCGMYVLVLAEYFC------------RRHAGEMETVSLDDYATPKRVTELRSQMPNLIERLKIA 216          
BLAST of NO02G02740 vs. NCBI_GenBank
Match: ETP24459.1 (hypothetical protein F441_02539 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 152.1 bits (383), Expect = 2.200e-33
Identity = 89/235 (37.87%), Postives = 123/235 (52.34%), Query Frame = 0
Query:    7 LFNYHDDAQVTEGDQILFRPPGWLNDRCINFYFRVLEHEEFQDRPDLLFMDPAVVSCMLIQCTDQGELEEVGEGLKLDRRSMVFIPVNDAEDFRSDCTHWSLLVYSAGNGSSAQPGKFFHLDSSGGRNEPAAKRTAAQFWRMV--AGK-EGGXXXXKVEAVRGCPQQVNGYDCGMYVLIMTKYLAHLYVTEGGSEEGRERSPKLNTTRLAARVTPDAIDEARRRIGLKIEQLAAA 239
            + NYH D Q+ E D  LF    WLND  +NFY + L   +     D+L MDPAVVSC+  QC ++ E +++  GL L  R +  IPV D +    D +HWSLL+Y        + G F H DSS G N+ AA+R A  F  ++  AG+ +G      VE V+  PQQ NGYDCGMYVL++ +Y              R  + ++ T  L    TP  + E R ++   IE+L  A
Sbjct:    5 VLNYH-DVQLYESDVALFAGRQWLNDNAVNFYLQYL--TQTVASRDVLLMDPAVVSCLQHQCENEDEYQDLASGLNLTSRQLCIIPVTDNDSLGGDSSHWSLLLY--------RDGMFQHFDSSSGHNKHAARRVAEPFELLLQAAGRYDGDGASRHVEEVQDVPQQQNGYDCGMYVLVLAEYFC------------RRHAGEMETVSLDDYATPKRVTELRSQMPNLIERLKIA 216          
BLAST of NO02G02740 vs. NCBI_GenBank
Match: ETK94493.1 (hypothetical protein L915_02470 [Phytophthora parasitica] >ETM00980.1 hypothetical protein L917_02370 [Phytophthora parasitica])

HSP 1 Score: 151.4 bits (381), Expect = 3.800e-33
Identity = 88/232 (37.93%), Postives = 122/232 (52.59%), Query Frame = 0
Query:    7 LFNYHDDAQVTEGDQILFRPPGWLNDRCINFYFRVLEHEEFQDRPDLLFMDPAVVSCMLIQCTDQGELEEVGEGLKLDRRSMVFIPVNDAEDFRSDCTHWSLLVYSAGNGSSAQPGKFFHLDSSGGRNEPAAKRTAAQFWRMV--AGK-EGGXXXXKVEAVRGCPQQVNGYDCGMYVLIMTKYLAHLYVTEGGSEEGRERSPKLNTTRLAARVTPDAIDEARRRIGLKIEQL 236
            + NYH D Q+ E D  LF    WLND  +NFY + L   +     D+L MDPAVVSC+  QC ++ E +++  GL L  R +  IPV D +    D +HWSLL+Y        + G F H DSS G N+ AA+R A  F  ++  AG+ +G      VE V+  PQQ NGYDCGMYVL++ +Y              R  + ++ T  L    TP  + E R ++   IE+L
Sbjct:    5 VLNYH-DVQLYESDVALFAGRQWLNDNAVNFYLQYL--TQTVASRDVLLMDPAVVSCLQHQCENEDEYQDLASGLNLTSRQLCIIPVTDNDSLGGDSSHWSLLLY--------RDGMFQHFDSSSGHNKHAARRVAEPFELLLQAAGRYDGDGASRHVEEVQDVPQQQNGYDCGMYVLVLAEYFC------------RRHAGEMETVSLDDYATPKRVTELRSQMPNLIERL 213          
BLAST of NO02G02740 vs. NCBI_GenBank
Match: XP_009535165.1 (ubiquitin1-specific protease [Phytophthora sojae] >EGZ10304.1 ubiquitin1-specific protease [Phytophthora sojae])

HSP 1 Score: 149.8 bits (377), Expect = 1.100e-32
Identity = 78/192 (40.62%), Postives = 109/192 (56.77%), Query Frame = 0
Query:    7 LFNYHDDAQVTEGDQILFRPPGWLNDRCINFYFRVLEHEEFQDRPDLLFMDPAVVSCMLIQCTDQGELEEVGEGLKLDRRSMVFIPVNDAEDFRSDCTHWSLLVYSAGNGSSAQPGKFFHLDSSGGRNEPAAKRTAAQFWRMVAG---KEGGXXXXKVEAVRGCPQQVNGYDCGMYVLIMTKYLAHLY-VTE 195
            + NYH D Q+ E D  LF    WLND  +NFY + L      D  D+L MDPAVVSC+L QC D+ E +++  G+ L +R +  +PV D +    D +HWSLL+++         G+F H DSS G N  AA+R A  F  ++      +G     +VE V+  PQQ NGYDCG+YVL++ +Y    + VTE
Sbjct:   14 VLNYH-DVQLYESDVALFSGRQWLNDNAVNFYLQFLTQTVASD--DVLLMDPAVVSCLLHQCEDEDEFQDLARGVNLAQRRLCLVPVTDNDLLGGDSSHWSLLLFA--------KGEFRHFDSSAGHNRHAARRVARSFEHLLKATGRHDGDGAADRVEEVQDAPQQQNGYDCGVYVLVLAEYFCRRHRVTE 194          
BLAST of NO02G02740 vs. NCBI_GenBank
Match: XP_002997555.1 (SUMO protease, putative [Phytophthora infestans T30-4] >EEY68625.1 SUMO protease, putative [Phytophthora infestans T30-4])

HSP 1 Score: 148.7 bits (374), Expect = 2.500e-32
Identity = 84/204 (41.18%), Postives = 110/204 (53.92%), Query Frame = 0
Query:    7 LFNYHDDAQVTEGDQILFRPPGWLNDRCINFYFRVLEHEEFQDRPDLLFMDPAVVSCMLIQCTDQGELEEVGEGLKLDRRSMVFIPVNDAEDFRSDCTHWSLLVYSAGNGSSAQPGKFFHLDSSGGRNEPAAKRTAAQF---WRMVAGKEGGXXXXKVEAVRGCPQQVNGYDCGMYVLIMTKYLAHLYVTEGGSEEGRERSPKL 208
            + NYH D Q+ E D  LF    WLND  INFY + L   +   R D+L MDPAVVSC+L QC D+ E +E+  GL L  + +  IPV D +   +  +HWSLL+YS G+        F H DSS G N  AA+R A  F    R    + G     ++  V+  PQQ NGYDCGMYVL++ +Y    +       E R + PKL
Sbjct:    5 VLNYH-DVQLYESDAALFTGHQWLNDNAINFYLQYL--TQTVARRDVLLMDPAVVSCLLHQCEDEDEYQELAIGLDLTSKQLCIIPVTDNDALGAGSSHWSLLLYSDGD--------FQHFDSSSGHNHHAARRLAESFEVLLRAAGKRRGSGFSRRLVEVQNAPQQQNGYDCGMYVLVLAEYFCRQHA------ELRLQLPKL 191          
BLAST of NO02G02740 vs. NCBI_GenBank
Match: XP_008861990.1 (hypothetical protein H310_00842 [Aphanomyces invadans] >ETW08185.1 hypothetical protein H310_00842 [Aphanomyces invadans])

HSP 1 Score: 145.2 bits (365), Expect = 2.700e-31
Identity = 89/230 (38.70%), Postives = 120/230 (52.17%), Query Frame = 0
Query:    8 FNYHDDAQVTEGDQILFRPPGWLNDRCINFYFRVLEHEEFQDRPDLLFMDPAVVSCMLIQCTDQGELEEVGEGLKLDRRSMVFIPVNDAEDFRSDCTHWSLLVYSAGNGSSAQPGKFFHLDSSGGRNEPAAKRTAAQFWRMVAGKEGGXXXXKVEAVRG--CPQQVNGYDCGMYVLIMTKYLAHLYVTEGGSEEGRERSPKLNTTRLAARVTPDAIDEARRRIGLKIEQL 236
            F YH DAQ+   D  LF    WLND  INFYF V+ H+      D+L MDPAVVSCM++QC +  +L ++ +GL+L  +S++ +PVND   F S  +HW+LLVYS+ NG       F   DSS   N  +A   A      V G+  G     V  VR   CPQQ N +DCGMY  ++ +++   Y              K +   L A VTP AI   RR +   ++QL
Sbjct:    4 FRYH-DAQLYARDLSLFTSNAWLNDAAINFYFTVVYHDLCGAPSDVLLMDPAVVSCMMLQCDEDEDLIDLTQGLQLKEKSLIVLPVNDRSSFDSQGSHWALLVYSSANG-------FEFYDSSADHNLHSAVEVAG-----VLGRALGLPTSTV-YVRSVTCPQQRNAFDCGMYACLIAEWVCTTYC-------------KAHLLSLDAFVTPQAIQSKRRSMPSLVDQL 206          
BLAST of NO02G02740 vs. NCBI_GenBank
Match: XP_009829560.1 (hypothetical protein H257_06137 [Aphanomyces astaci] >ETV80613.1 hypothetical protein H257_06137 [Aphanomyces astaci])

HSP 1 Score: 144.1 bits (362), Expect = 6.000e-31
Identity = 84/223 (37.67%), Postives = 116/223 (52.02%), Query Frame = 0
Query:   13 DAQVTEGDQILFRPPGWLNDRCINFYFRVLEHEEFQDRPDLLFMDPAVVSCMLIQCTDQGELEEVGEGLKLDRRSMVFIPVNDAEDFRSDCTHWSLLVYSAGNGSSAQPGKFFHLDSSGGRNEPAAKRTAAQFWRMVAGKEGGXXXXKVEAVRGCPQQVNGYDCGMYVLIMTKYLAHLYVTEGGSEEGRERSPKLNTTRLAARVTPDAIDEARRRIGLKIEQL 236
            DAQ+ + D  LF    WLND  I+FYF V+ H       D+L MDPAVVSCM++QC D  +L ++ +GL+L  +S++ +PVND   F S  +HW+LLVYS  +G       F   DSS   N  +A   A      V G+  G     V     CPQQ N YDCGMYV ++ ++L   + ++              +  LA  VTP AI   RR +   ++QL
Sbjct:    9 DAQLYDRDLRLFTTNAWLNDAAIHFYFTVVFHTLCGAPGDVLLMDPAVVSCMMLQCDDDEDLMDLAQGLQLKEKSLIVLPVNDRRSFDSQGSHWALLVYSTAHG-------FQFYDSSADHNFDSAMEVAG-----VLGRALGLPTDSVVRSVPCPQQHNAYDCGMYVCMVAEWLCTSHCSK-------------QSLPLAEFVTPTAIQSKRRNMPSIVDQL 206          
BLAST of NO02G02740 vs. NCBI_GenBank
Match: OQR82186.1 (SUMO protease [Thraustotheca clavata])

HSP 1 Score: 144.1 bits (362), Expect = 6.000e-31
Identity = 79/189 (41.80%), Postives = 107/189 (56.61%), Query Frame = 0
Query:   10 YHDDAQVTEGDQILFRPPGWLNDRCINFYFRVLEHEEFQDRPDLLFMDPAVVSCMLIQCTDQGELEEVGEGLKLDRRSMVFIPVNDAEDFRSDCTHWSLLVYSAGNGSSAQPGKFFHLDSSGGRNEPAAKRTAAQFWRMVAGKEGGXXXXKVE-AVRGCPQQVNGYDCGMYVLIMTKYLAHLYVTEGGS 198
            YH DAQ+ + D  LF    WLND  INFY  ++ HE    R D+L MDPAVVSCM++QC D+ +L ++  GL+L  + M+ +PVND E+F S  +HW+LLVY        +  KF+  DSS   N  +A+  A      V  K  G     +E     CPQQ NG DCGMYV ++ ++L+  Y T   S
Sbjct:    6 YH-DAQLYDQDLKLFTQNAWLNDAAINFYLTMIYHEMVHGRDDVLLMDPAVVSCMMLQCDDEEDLLDLAHGLQLQFKKMILLPVNDRENFDSQGSHWALLVYH----QQTKSYKFY--DSSNNHNLQSAREVA-----QVLDKALGTKSRHIEIECPACPQQRNGVDCGMYVCLIAEWLSIRYATNDQS 182          
BLAST of NO02G02740 vs. NCBI_GenBank
Match: XP_024572726.1 (ubiquitin1-specific protease [Plasmopara halstedii] >CEG36357.1 ubiquitin1-specific protease [Plasmopara halstedii])

HSP 1 Score: 137.5 bits (345), Expect = 5.700e-29
Identity = 77/187 (41.18%), Postives = 103/187 (55.08%), Query Frame = 0
Query:    5 KLLFNYHDDAQVTEGDQILFRPPGWLNDRCINFYFRVLEHEEFQDRPDLLFMDPAVVSCMLIQCTDQGELEEVGEGLKLDRRSMVFIPVNDAEDFRSDCTHWSLLVYSAGNGSSAQPGKFFHLDSSGGRNEPAAKRTAAQFWRMV--AGKEGG-XXXXKVEAVRGCPQQVNGYDCGMYVLIMTKYLA 189
            K +  YH D Q+ E D  LF    WLND  INFY + L         D+L MDPAVVSC+L QC D+ E +E+ +GL L  + +  IPV D        +HWSLLVY        + G F H DSS G N+ AA+R A  F  ++  AG+        +V+ V+  PQQ N YDCG+YVLI  ++++
Sbjct:    3 KQVLKYH-DVQLYESDVALFTGSQWLNDNAINFYLQYLTQTVVPH--DMLLMDPAVVSCLLHQCKDEDEYKELADGLDLKSKRICLIPVTDNVTLGGKSSHWSLLVY--------RNGDFQHFDSSSGHNKTAAQRVANSFKSILQAAGRSDELKDFTRVQEVQDAPQQQNSYDCGVYVLIAAEFIS 178          
The following BLAST results are available for this feature:
BLAST of NO02G02740 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
ETM54156.11.000e-3338.36hypothetical protein L914_02465 [Phytophthora para... [more]
ETO83377.12.200e-3337.87hypothetical protein F444_02585 [Phytophthora para... [more]
ETP24459.12.200e-3337.87hypothetical protein F441_02539 [Phytophthora para... [more]
ETK94493.13.800e-3337.93hypothetical protein L915_02470 [Phytophthora para... [more]
XP_009535165.11.100e-3240.63ubiquitin1-specific protease [Phytophthora sojae] ... [more]
XP_002997555.12.500e-3241.18SUMO protease, putative [Phytophthora infestans T3... [more]
XP_008861990.12.700e-3138.70hypothetical protein H310_00842 [Aphanomyces invad... [more]
XP_009829560.16.000e-3137.67hypothetical protein H257_06137 [Aphanomyces astac... [more]
OQR82186.16.000e-3141.80SUMO protease [Thraustotheca clavata][more]
XP_024572726.15.700e-2941.18ubiquitin1-specific protease [Plasmopara halstedii... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006919NSK006919Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G02740.1NO02G02740.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100026g28gene277Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G02740.1NO02G02740.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G02740 ID=NO02G02740|Name=NO02G02740|organism=Nannochloropsis oceanica|type=gene|length=1111bp
ATGAACTCAGAAAAGCTTCTGTTCAACTACCACGACGACGCCCAAGTCAC
GGAGGGAGACCAAATACTTTTCAGACCCCCCGGATGGCTGAATGACCGAT
GCATCAATTTCTACTTCCGGGTATTGGAGCACGAGGAGTTTCAGGATCGA
CCAGATTTATTGTTTATGGACCCGGCGGTTGTATCGTGCATGTTGATACA
GTGCACTGgtaggtgctgggatggaataagggggggggggaggggccgaa
tagaatgaagaagggagggaggacgggcggtgcagggacagatctgcaaa
aatttgaagagcaaaaagtgacggctcttggtaggagctctcatatgaat
ttgtaacctccgtgacatccattgttttatggaaacttatttgggaatcc
attacttaaaattgtatcgtagACCAAGGCGAGTTGGAGGAAGTGGGGGA
GGGCTTGAAGCTGGATAGACGAAGCATGGTCTTCATCCCCGTCAACGACG
CCGAGGATTTCAGGAGTGATTGCACGCACTGgtatgtatgttagcatgtc
accgttctcctcggaggtctgcatgcgtgtgacaactttgcttcttttcc
taccccgtccgtttctcacagggtctctttcattcctccacgacactcac
agaacctattacacacatccactatcagGAGCCTTCTCGTCTACAGCGCT
GGCAACGGCAGCAGCGCTCAGCCCGGGAAATTCTTCCACCTCGACTCGAG
CGGTGGTAGGAATGAACCAGCCGCCAAAAGGACAGCTGCTCAGTTTTGGC
GCATGGTGGCAGGGAAGGAGGGAGGGAAGGAGGGAGGGAAGGTGGAAGCT
GTGCGGGGATGTCCACAGCAGGTGAACGGGTATGACTGCGGGATGTATGT
CTTGATCATGACGAAGTATTTGGCGCATCTTTATGTGACGGAGGGTGGGA
GTGAAGAAGGGAGGGAACGGTCTCCGAAGCTTAATACGACGAGATTGGCG
GCGCGTGTGACCCCGGATGCGATTGATGAAGCGAGGAGGAGGATCGGGCT
GAAGATCGAACAGCTTGCTGCTGCTGCTGATGGTGGTGTTGATGGTGACT
CTAGGGATTAG
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protein sequence of NO02G02740.1

>NO02G02740.1-protein ID=NO02G02740.1-protein|Name=NO02G02740.1|organism=Nannochloropsis oceanica|type=polypeptide|length=250bp
MNSEKLLFNYHDDAQVTEGDQILFRPPGWLNDRCINFYFRVLEHEEFQDR
PDLLFMDPAVVSCMLIQCTDQGELEEVGEGLKLDRRSMVFIPVNDAEDFR
SDCTHWSLLVYSAGNGSSAQPGKFFHLDSSGGRNEPAAKRTAAQFWRMVA
GKEGGKEGGKVEAVRGCPQQVNGYDCGMYVLIMTKYLAHLYVTEGGSEEG
RERSPKLNTTRLAARVTPDAIDEARRRIGLKIEQLAAAADGGVDGDSRD*
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Synonyms
Publications