NO02G02390, NO02G02390 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G02390 vs. NCBI_GenBank
Match: XP_024575160.1 (transmembrane protein [Plasmopara halstedii] >CEG38791.1 transmembrane protein [Plasmopara halstedii]) HSP 1 Score: 140.2 bits (352), Expect = 1.100e-29 Identity = 70/153 (45.75%), Postives = 105/153 (68.63%), Query Frame = 0 Query: 150 YLTVAVIAAGSLYFIVDELMPSRTSANHLFNEAFDAVKQNHDVLNRYGEPLKGYGRDGGGRREGRRNFVEHKNYVGEDGSKRLRIRFNIEGPFGHAFVFAEVTSDMPKGQWMYLLVQDIQTGRVMTLEDNRAMHQALAKSASPEERAALQALI 303 +L + + A +YF+ EL+P+R S N LF+E+ + + +N DV +R G P+ GYG D GG REGRRN +EH N +DG+ RLRI++NI+GP GHA+VFAEV +M K +++YL+VQ +TG ++ + DNR + +A K EE+ AL+ L+ Sbjct: 625 WLGLLGLGAVGVYFVARELLPNRMSPNGLFSESLEFLSENTDVTSRLGLPIHGYGHDHGGHREGRRNRIEHVNLTAKDGTPRLRIKYNIKGPSGHAYVFAEVNKNMKKNEYVYLIVQVTKTGELLKIIDNRQILEAETK----EEQDALRQLL 773
BLAST of NO02G02390 vs. NCBI_GenBank
Match: XP_008911942.1 (hypothetical protein PPTG_15482 [Phytophthora parasitica INRA-310] >ETI32151.1 hypothetical protein F443_20970 [Phytophthora parasitica P1569] >ETK77510.1 hypothetical protein L915_16234 [Phytophthora parasitica] >ETL30951.1 hypothetical protein L916_16129 [Phytophthora parasitica] >ETL84203.1 hypothetical protein L917_15933 [Phytophthora parasitica] >ETM37393.1 hypothetical protein L914_16049 [Phytophthora parasitica] >ETN02727.1 hypothetical protein PPTG_15482 [Phytophthora parasitica INRA-310] >ETO66031.1 hypothetical protein F444_16714 [Phytophthora parasitica P1976] >ETP02008.1 hypothetical protein F441_20833 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 139.8 bits (351), Expect = 1.400e-29 Identity = 71/152 (46.71%), Postives = 101/152 (66.45%), Query Frame = 0 Query: 150 YLTVAVIAAGSLYFIVDELMPSRTSANHLFNEAFDAVKQNHDVLNRYGEPLKGYGRDGGGRREGRRNFVEHKNYVGEDGSKRLRIRFNIEGPFGHAFVFAEVTSDMPKGQWMYLLVQDIQTGRVMTLEDNRAMHQALAKSASPEERAALQAL 302 +L + + A +YF+ EL+P+R S N LF+E+ D + +N DV +R G P+ GYG D GG REGRRN +EH N +DG+ RLRI++NI+GP GHA+VFAEV +M K +++YL+VQ +TG ++ + DNR Q LA E+ A Q L Sbjct: 79 WLGLIGLGAVGVYFVARELLPNRMSPNGLFSESLDFLSENTDVTSRLGLPIHGYGHDHGGHREGRRNRIEHVNLQAKDGTPRLRIKYNIKGPSGHAYVFAEVNKNMKKNEYVYLIVQVTKTGELLKIVDNR---QILAAETKEEQDALRQLL 227
BLAST of NO02G02390 vs. NCBI_GenBank
Match: ETI32152.1 (hypothetical protein, variant [Phytophthora parasitica P1569] >ETK77511.1 hypothetical protein, variant [Phytophthora parasitica] >ETL30952.1 hypothetical protein, variant [Phytophthora parasitica] >ETL84204.1 hypothetical protein, variant [Phytophthora parasitica] >ETM37394.1 hypothetical protein, variant [Phytophthora parasitica] >ETO66032.1 hypothetical protein, variant [Phytophthora parasitica P1976] >ETP02009.1 hypothetical protein, variant [Phytophthora parasitica CJ01A1]) HSP 1 Score: 139.8 bits (351), Expect = 1.400e-29 Identity = 71/152 (46.71%), Postives = 101/152 (66.45%), Query Frame = 0 Query: 150 YLTVAVIAAGSLYFIVDELMPSRTSANHLFNEAFDAVKQNHDVLNRYGEPLKGYGRDGGGRREGRRNFVEHKNYVGEDGSKRLRIRFNIEGPFGHAFVFAEVTSDMPKGQWMYLLVQDIQTGRVMTLEDNRAMHQALAKSASPEERAALQAL 302 +L + + A +YF+ EL+P+R S N LF+E+ D + +N DV +R G P+ GYG D GG REGRRN +EH N +DG+ RLRI++NI+GP GHA+VFAEV +M K +++YL+VQ +TG ++ + DNR Q LA E+ A Q L Sbjct: 42 WLGLIGLGAVGVYFVARELLPNRMSPNGLFSESLDFLSENTDVTSRLGLPIHGYGHDHGGHREGRRNRIEHVNLQAKDGTPRLRIKYNIKGPSGHAYVFAEVNKNMKKNEYVYLIVQVTKTGELLKIVDNR---QILAAETKEEQDALRQLL 190
BLAST of NO02G02390 vs. NCBI_GenBank
Match: XP_002997863.1 (transmembrane protein, putative [Phytophthora infestans T30-4] >EEY67838.1 transmembrane protein, putative [Phytophthora infestans T30-4]) HSP 1 Score: 138.7 bits (348), Expect = 3.200e-29 Identity = 71/153 (46.41%), Postives = 103/153 (67.32%), Query Frame = 0 Query: 150 YLTVAVIAAGSLYFIVDELMPSRTSANHLFNEAFDAVKQNHDVLNRYGEPLKGYGRDGGGRREGRRNFVEHKNYVGEDGSKRLRIRFNIEGPFGHAFVFAEVTSDMPKGQWMYLLVQDIQTGRVMTLEDNRAMHQALAKSASPEERAALQALI 303 +L + + A +YF+ EL+P+R S N LF+E+ D + +N DV +R G P+ GYG D GG REGRRN +EH N +DG+ RLRI++NI+GP GHA+VFAEV M K +++YL+VQ +TG ++ + DNR + A K EE+ AL+ L+ Sbjct: 79 WLGLIGLGAVGVYFVARELLPNRMSPNGLFSESLDFLSENTDVTSRLGLPIHGYGYDHGGHREGRRNRIEHVNLQAKDGTPRLRIKYNIKGPSGHAYVFAEVNKGMKKNEYVYLIVQVTKTGELLKIIDNRQILSAETK----EEQDALRQLL 227
BLAST of NO02G02390 vs. NCBI_GenBank
Match: KUF81088.1 (Mitochondrial import inner membrane translocase subunit Tim21 [Phytophthora nicotianae] >KUF82513.1 Mitochondrial import inner membrane translocase subunit Tim21 [Phytophthora nicotianae]) HSP 1 Score: 137.5 bits (345), Expect = 7.000e-29 Identity = 70/152 (46.05%), Postives = 100/152 (65.79%), Query Frame = 0 Query: 150 YLTVAVIAAGSLYFIVDELMPSRTSANHLFNEAFDAVKQNHDVLNRYGEPLKGYGRDGGGRREGRRNFVEHKNYVGEDGSKRLRIRFNIEGPFGHAFVFAEVTSDMPKGQWMYLLVQDIQTGRVMTLEDNRAMHQALAKSASPEERAALQAL 302 +L + + A +YF+ EL+P+R S N LF+E+ D + + DV +R G P+ GYG D GG REGRRN +EH N +DG+ RLRI++NI+GP GHA+VFAEV +M K +++YL+VQ +TG ++ + DNR Q LA E+ A Q L Sbjct: 79 WLGLIGLGAVGVYFVARELLPNRMSPNGLFSESLDFLSEKTDVTSRLGLPIHGYGHDHGGHREGRRNRIEHVNLQAKDGTPRLRIKYNIKGPSGHAYVFAEVNKNMKKNEYVYLIVQVTKTGELLKIVDNR---QILAAETKEEQDALRQLL 227
BLAST of NO02G02390 vs. NCBI_GenBank
Match: CCI46004.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 136.0 bits (341), Expect = 2.000e-28 Identity = 67/147 (45.58%), Postives = 99/147 (67.35%), Query Frame = 0 Query: 156 IAAGSLYFIVDELMPSRTSANHLFNEAFDAVKQNHDVLNRYGEPLKGYGRDGGGRREGRRNFVEHKNYVGEDGSKRLRIRFNIEGPFGHAFVFAEVTSDMPKGQWMYLLVQDIQTGRVMTLEDNRAMHQALAKSASPEERAALQALI 303 + A +YF++ EL+P+R S N LF+E + V N DV +R G P+ GYG D GG REGRRN +EH + +DG+ RLRI++NI+GP GHA+VFAEV M K +++YL++Q +TG ++ + DNR + + S EE+ AL+ L+ Sbjct: 75 LGAVGVYFVIRELLPNRMSPNGLFSETLEFVSNNTDVTSRIGLPVHGYGHDHGGHREGRRNRIEHVDLKDKDGNPRLRIKYNIKGPLGHAYVFAEVNQTMKKNEYVYLIIQFTKTGEIIKIVDNR----RILAAESFEEQEALRQLL 217
BLAST of NO02G02390 vs. NCBI_GenBank
Match: CCA21536.1 (transmembrane protein putative [Albugo laibachii Nc14]) HSP 1 Score: 133.3 bits (334), Expect = 1.300e-27 Identity = 68/146 (46.58%), Postives = 96/146 (65.75%), Query Frame = 0 Query: 156 IAAGSLYFIVDELMPSRTSANHLFNEAFDAVKQNHDVLNRYGEPLKGYGRDGGGRREGRRNFVEHKNYVGEDGSKRLRIRFNIEGPFGHAFVFAEVTSDMPKGQWMYLLVQDIQTGRVMTLEDNRAMHQALAKSASPEERAALQAL 302 + A +YF++ EL+P+R S N LF+E V N DV +R G P+ GYG D GG REGRRN +EH + +DG+ RLRI++NI+GP GHA+VFAEV M K +++YL++Q +TG ++ + DNR LA +S E+ A Q L Sbjct: 73 LGAVGVYFVIRELLPNRMSPNGLFSETLAIVSSNTDVTSRIGLPVHGYGHDHGGHREGRRNRIEHVDLNDKDGNPRLRIKYNIKGPSGHAYVFAEVNQAMKKNEFVYLILQFTKTGEIVKIVDNR---HILAAESSEEQEALRQLL 215
BLAST of NO02G02390 vs. NCBI_GenBank
Match: OEU21309.1 (hypothetical protein FRACYDRAFT_206320 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 132.9 bits (333), Expect = 1.700e-27 Identity = 74/172 (43.02%), Postives = 108/172 (62.79%), Query Frame = 0 Query: 139 GEKIGFMRGLA-YLTVAVIAAGSLYFIVDELMPSRTSANHLFNEAFDAVKQNHDVLNRYGE-PLKGYGRDGGGRREGRRNFVEHKNYVG-EDGSKRLRIRFNIEGPFGHAFVFAEVTSDMPKGQWMYLLVQDIQTGRVMTLEDNRAMHQALAKSASPEERAALQALIQSGGS 308 GEK+ L + + A+ Y+I EL+P++ S N +F++A ++ N V +YG+ +K YG+D GG REGRRNF+EH Y EDGSKR R+RFN+EG F AF FAEV+++M G+++Y+LVQD ++GRV+T+ DNRA A S + +E A + G S Sbjct: 84 GEKVAAASRLTMWAGIFAFASVCAYYIGKELIPTKMSPNTVFSKACKTIRDNSQVKLKYGDSSIKFYGKDHGGHREGRRNFIEHTQYNNEEDGSKRTRVRFNMEGQFASAFCFAEVSNEMSSGEFVYILVQDKKSGRVITVVDNRAALTAKRMSGNNQESAEAMKKLLGGNS 255
BLAST of NO02G02390 vs. NCBI_GenBank
Match: GAX14511.1 (hypothetical protein FisN_11Hh026 [Fistulifera solaris]) HSP 1 Score: 132.9 bits (333), Expect = 1.700e-27 Identity = 72/173 (41.62%), Postives = 106/173 (61.27%), Query Frame = 0 Query: 139 GEKIGFMRGLA-YLTVAVIAAGSLYFIVDELMPSRTSANHLFNEAFDAVKQNHDVLNRYGEPLKGYGRDGGGRREGRRNFVEHKNYVG-EDGSKRLRIRFNIEGPFGHAFVFAEVTSDMPKGQWMYLLVQDIQTGRVMTLEDNRAMHQALAKSASPEERAALQALIQSGGSQR 310 GEK+ L YL +A AA Y+I EL+P++ S N +F+ +F+ ++++ RD GG REGRRNFVEH YV +DGSKR R+R+N+EG FG+AF FAEV++ MP G+++Y+LVQD GRV T+ DNRA A +A +E + + + +G + + Sbjct: 75 GEKVVAATRLGWYLGLASFAAACAYYIGKELIPTKMSPNRVFDRSFEIIRKDPXXXXXXXXXXXXXXRDHGGHREGRRNFVEHTEYVSPDDGSKRTRVRYNLEGRFGNAFYFAEVSNQMPSGEFVYILVQDKSNGRVQTIVDNRAAMTAARLTAGSKEAQSAMSQLLTGSNNK 247
BLAST of NO02G02390 vs. NCBI_GenBank
Match: XP_008615195.1 (hypothetical protein SDRG_10956 [Saprolegnia diclina VS20] >EQC31354.1 hypothetical protein SDRG_10956 [Saprolegnia diclina VS20]) HSP 1 Score: 131.7 bits (330), Expect = 3.900e-27 Identity = 78/163 (47.85%), Postives = 106/163 (65.03%), Query Frame = 0 Query: 141 KIGFMRGLAYLTVAVIAAGSLYFIVDELMPSRTSANHLFNEAFDAVKQNHDVLNRYGEPLKGYGRDGGGRREGRRNFVEHKNYVGEDGSK-RLRIRFNIEGPFGHAFVFAEVTSDMPKGQWMYLLVQDIQTGRVMTLEDNRAMHQALAKSASPEERAALQALI 303 ++G G+A L+V YFIV EL PSR S N LF+EA D V QN VL R G P++ YGRD GG +EGRRNF+EH ++G+K RLRI+FN++GP G A +AE + M KG+++YL+VQ TG ++ ++DNR + QA S EER AL+ L+ Sbjct: 67 QVGMWAGIAGLSVV-----CGYFIVRELFPSRMSPNSLFSEASDIVLQNDMVLQRLGAPIRCYGRDHGGHKEGRRNFIEHVELNDKEGNKTRLRIKFNLQGPNGKAQAWAETYASMNKGEYVYLIVQ-TYTGEIIKIQDNRQILQA----DSEEERDALKRLL 219 The following BLAST results are available for this feature:
BLAST of NO02G02390 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G02390 ID=NO02G02390|Name=NO02G02390|organism=Nannochloropsis oceanica|type=gene|length=930bpback to top protein sequence of NO02G02390.1 >NO02G02390.1-protein ID=NO02G02390.1-protein|Name=NO02G02390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=310bpback to top Synonyms
Publications
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