NO02G02380, NO02G02380 (gene) Nannochloropsis oceanica

Overview
NameNO02G02380
Unique NameNO02G02380
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3576
Alignment locationchr2:661137..664712 +

Link to JBrowse

Properties
Property NameValue
DescriptionActin-related protein 6
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:661137..664712 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006338chromatin remodeling
GO:0016043cellular component organization
Vocabulary: INTERPRO
TermDefinition
IPR030054Arp6
IPR004000Actin
Homology
BLAST of NO02G02380 vs. NCBI_GenBank
Match: EWM30427.1 (actin-related protein 6 [Nannochloropsis gaditana])

HSP 1 Score: 625.9 bits (1613), Expect = 1.000e-175
Identity = 308/456 (67.54%), Postives = 365/456 (80.04%), Query Frame = 0
Query:   34 PAAAPVASPRKGGHKVHTSSNRVAGGGEGQGNMPTLVLDNGAYHLKVGFAGDPAPRLLMPNCTAKLKGQLQLLVGDDIDLVNNTANLQYTRPFDRGYLTNWEAENQVWKRAFGETNLKVEPEETRLVVTEAPFTPTSLSTFSTQVIFEEFGFAACAKLPAAILSGHHYTSTQPQQEPQPQCALLGGGRINCALVIDSGFSFTHVIPLYKNRAQRAGIRRVNVGGKLLTNFLKETVSYRQWNMMDEFQLMNDAKEALCYVSQDFVAEMAKLRPGGGPNRRLRAHEGIRRNFVLPDFHNTMKGYVQDEQPRLHEQYQEERKEEPEQQVLSMEVERFVVPEVLFRPSDVGLRQGGLPEAVVEAVESCDIGLRASLYSNIILTGGNVLFPGLAQRLKTELRALVPEYYSLAVHTPSDPIGYAWQGGGRFAQEQPQTFVTKAQYNEYGPEACQEHVFDVQW 490
            PAA+  +     GH+ +T++  +    + +G+  TLVLDNGA  +K+GFAGDPAPR  +PNC AKLKGQLQ L+G+D+D VNNTANLQYTRPFDRGYLT+WEAE+Q+W RAFG    KV+P +T LV+TEAPFTP+ L+TFSTQV+FEEFGFAACAK+PAA  SG+ Y+  + QQ+ Q       G  ++  LVIDSGFSFTHV+P+Y+ +AQRAG+RRVNVGGKLLTN LKETVSYRQWNMMDEFQLMNDAKEALC+VSQ+F AEMAK+RPGGGP+R++R  E +RRNFVLPDF  TM+GYVQD Q + H+Q       E EQQVLSMEVERFVVPEVLFRPSDVGLRQGGLPEAVVEAVE+CDIGLR +LY+NI+LTGGNVLFPG AQRL TELR  VPEYYS+ V  P DPI YAW+G    AQ QPQ FV+K+QY+EYG E  QE +FD  W
Sbjct:    4 PAASGASGTGFSGHQ-NTNNTNIVTRPQNEGDFVTLVLDNGADRMKMGFAGDPAPRFYIPNCMAKLKGQLQWLIGEDMDSVNNTANLQYTRPFDRGYLTDWEAEHQIWGRAFGANKAKVDPAQTHLVLTEAPFTPSPLATFSTQVVFEEFGFAACAKMPAASFSGYRYSLMEKQQQQQLGHQQGEGTGVDAVLVIDSGFSFTHVVPMYRGKAQRAGVRRVNVGGKLLTNLLKETVSYRQWNMMDEFQLMNDAKEALCFVSQNFGAEMAKIRPGGGPSRQVRTQEALRRNFVLPDFQTTMRGYVQDVQVQGHQQ------TEAEQQVLSMEVERFVVPEVLFRPSDVGLRQGGLPEAVVEAVEACDIGLRGALYNNIVLTGGNVLFPGFAQRLHTELRIRVPEYYSVKVQAPPDPIEYAWRGAAHMAQYQPQIFVSKSQYDEYGAEFIQERMFDGLW 452          
BLAST of NO02G02380 vs. NCBI_GenBank
Match: CDH52255.1 (arp6 actin-related protein 6 homolog [Lichtheimia corymbifera JMRC:FSU:9682])

HSP 1 Score: 323.2 bits (827), Expect = 1.400e-84
Identity = 167/420 (39.76%), Postives = 251/420 (59.76%), Query Frame = 0
Query:   67 PTLVLDNGAYHLKVGFAGDPAPRLLMPNCTAKLKGQLQLLVGDDIDLVNNTANLQYTRPFDRGYLTNWEAENQVWKRAFGETNLKVEPEETRLVVTEAPFTPTSLSTFSTQVIFEEFGFAACAKLPAAILSGHHYTSTQPQQEPQPQCALLGGGRINCALVIDSGFSFTHVIPLYKNRAQRAGIRRVNVGGKLLTNFLKETVSYRQWNMMDEFQLMNDAKEALCYVSQDFVAEMAKLRPGGGPNRRLRAHEGIRRNFVLPDFHNTMKGYVQDEQPRLHEQYQEERKEEPEQQVLSMEVERFVVPEVLFRPSDVGLRQGGLPEAVVEAVESCDIGLRASLYSNIILTGGNVLFPGLAQRLKTELRALVPEYYSLAVHTPSDPIGYAWQGGGRFA-----QEQPQTFVTKAQYNEYGPEACQ 482
            P +VLDNG   +K+  A D  PR L+PN   + +   +  +GD I+   + ++L Y  PF+RGYLTNW  E  +W R FG   L ++P+++ +++TE  F  +++     QVIFE++ FA+C +  A  L  ++  S+     P        G   +CALV+DSGFSFTH++P +K +  R  IRR+NVGGKLLTN LKETVS+R ++MM+E  ++N  KE  CYVS D   ++   R     N        + + +VLPD+ NTM+G+V+ +Q R   Q    +K    +Q+L+M  ERF++PE+L  PSD+G++Q G+PEA+ ++V +CD  L   LY+NIIL GGN   PG  +R+  +LR + P  Y L +  P +P+ YAW GG  F       +  +TFV++ +Y EYG E C+
Sbjct:    3 PVVVLDNGGSTIKINTAHDTEPR-LVPNAIIRGRSDRRNFIGDQIEQCTDFSSLYYRLPFERGYLTNWGVERPIWNRLFGSV-LNIDPKDSGILITEPCFNLSNIQEVYDQVIFEDYEFASCYRTTAPQLCIYNDISSIFGDRP--------GSIPDCALVVDSGFSFTHIVPFWKGKPVRRAIRRINVGGKLLTNQLKETVSFRYYDMMEETHIINQVKEECCYVSLDVYKDLDTCRQPYHAN-------DVVQEYVLPDYINTMRGHVRPKQAR---QSSTLKKGASSEQILTMNNERFMIPELLMHPSDIGIQQAGIPEAITQSVNACDAELHGLLYANIILVGGNTNIPGYRERIMQDLRTMAPSTYELRIAQPENPVEYAWHGGQNFVALSSRSDLQRTFVSRKEYFEYGSEICR 402          
BLAST of NO02G02380 vs. NCBI_GenBank
Match: XP_022293675.1 (actin-related protein 6-like [Crassostrea virginica])

HSP 1 Score: 320.9 bits (821), Expect = 7.100e-84
Identity = 170/425 (40.00%), Postives = 254/425 (59.76%), Query Frame = 0
Query:   66 MPTLVLDNGAYHLKVGFAGDPAPRLLMPNCTAKLKG-QLQLLVGDDIDLVNNTANLQYTRPFDRGYLTNWEAENQVWKRAFGETNLKVEPEETRLVVTEAPFTPTSLSTFSTQVIFEEFGFAACAKLPAAILSGHHYTSTQPQQEPQPQCALLGGGRINCALVIDSGFSFTHVIPLYKNRAQRAGIRRVNVGGKLLTNFLKETVSYRQWNMMDEFQLMNDAKEALCYVSQDFVAEMAKLRPGGGPNRRLRAHEGIRRNFVLPDFHNTMKGYVQDEQPRLHEQYQEERKEEPEQQVLSMEVERFVVPEVLFRPSDVGLRQGGLPEAVVEAVESCDIGLRASLYSNIILTGGNVLFPGLAQRLKTELRALVPEYYSLAVHTPSDPIGYAWQGGGRFA--QEQPQTFVTKAQYNEYGPEACQEHVFDV 488
            M T+VLDNGA   KVG+A D  PR ++PNC  K K  + ++ +GD ID   + + L Y  PF +GYL NW+ E QVW   FG+  LKV+  ET ++VTE  F   S+     ++ FEE+ F +  K  A+ LS + Y     +++  P           C++V+D+G+SF+HV+P ++ +     ++RVNVGGK+LTN LKE +SYRQ  +MDE  ++N  KE +CYVS  F  +M   +  G  N        I R++VLPD+ +  +GYV+ ++       +   K +  +Q++ M  ERF VPE+LF PSDVG+++ G+ EA+V A+ +    ++  +YSNIILTGGN L PG + R  +E+R++ PE Y + V TP++PI YAW+GG   A  ++  +  VT+ QY EYG   C E  FD+
Sbjct:    2 MATVVLDNGAGTAKVGYATDKEPR-IVPNCVTKAKNVRTRIFIGDQIDDCKDLSGLYYLLPFQKGYLVNWDIERQVWDYLFGKDALKVDFNETNIIVTEPYFNFNSVQEAMNEIFFEEYAFKSVLKTNASFLSQYKYN----KEKNAPPL---------CSVVLDTGYSFSHVVPYFRGKKMSESVKRVNVGGKVLTNHLKEVISYRQLMVMDETYVINQVKEDVCYVSSQFTKDMEIAKKRGKENT-------IARDYVLPDYTHIKRGYVRPQE-------ETTGKAKDGEQIIRMNNERFAVPELLFHPSDVGVQEMGVAEALVYAISTLPEEMQPHMYSNIILTGGNCLLPGFSDRFYSEVRSMAPEEYEITVKTPNNPITYAWEGGSLLANTEDYKKMAVTREQYEEYGHTICSE-TFDI 397          
BLAST of NO02G02380 vs. NCBI_GenBank
Match: XP_015820583.1 (PREDICTED: actin-related protein 6 [Nothobranchius furzeri])

HSP 1 Score: 320.5 bits (820), Expect = 9.200e-84
Identity = 170/425 (40.00%), Postives = 256/425 (60.24%), Query Frame = 0
Query:   66 MPTLVLDNGAYHLKVGFAGDPAPRLLMPNCTAKLK-GQLQLLVGDDIDLVNNTANLQYTRPFDRGYLTNWEAENQVWKRAFGETNLKVEPEETRLVVTEAPFTPTSLSTFSTQVIFEEFGFAACAKLPAAILSGHHYTSTQPQQEPQPQCALLGGGRINCALVIDSGFSFTHVIPLYKNRAQRAGIRRVNVGGKLLTNFLKETVSYRQWNMMDEFQLMNDAKEALCYVSQDFVAEMAKLRPGGGPNRRLRAHEGIRRNFVLPDFHNTMKGYVQDEQPRLHEQYQEERKEEPEQQVLSMEVERFVVPEVLFRPSDVGLRQGGLPEAVVEAVESCDIGLRASLYSNIILTGGNVLFPGLAQRLKTELRALVPEYYSLAVHTPSDPIGYAWQGGGRFAQ--EQPQTFVTKAQYNEYGPEACQEHVFDV 488
            M TLVLDNGA   K+G++ +     ++PNC  + K  +L+    + +D + + + L Y  PF +GYL NW+ + +VW   FG+   KVE  +T ++VTE  F  +S+     +++FEE+ F +  ++ A  LS HHY  T+P +               C LV+DSGFSFTH++P  +++  + GIRR+NVGGKLLTN LKE +SYRQ ++MDE  ++N  KE +CYVSQ F  +M      G  N        + R++VLPDF +  KG+    +PR  E+     K +  +Q+L +  ERF VPE+LF PSD+G+++ GLPEA+V +V+S    ++   Y NIILTGGN LFPG  +RL+ ELR+LVP +  ++V  PS+P+ Y+W+GG   A   +  +  VT+ ++ E G   C+E  FD+
Sbjct:    1 MATLVLDNGANSAKIGYSQEKV--RVIPNCQFRSKTSRLKTFTANQLDEIKDPSGLFYILPFQKGYLVNWDVQRKVWDHLFGKEMFKVEFVDTSIIVTEPYFNFSSIQESMNEILFEEYQFQSALRINAGSLSAHHYFHTKPSE--------------LCCLVVDSGFSFTHIVPYCRSKKLKEGIRRINVGGKLLTNHLKEIISYRQLHVMDETHVINQVKEDVCYVSQQFYKDMEIALSKGEDN-------SVVRDYVLPDFSSIKKGFC---KPR--EEMVLSGKYKTGEQILRLANERFAVPEMLFHPSDIGIQEMGLPEAIVHSVQSLPEEMQPHFYQNIILTGGNTLFPGFRERLEAELRSLVPAHLPVSVILPSNPVSYSWEGGKLLAHSPDYEEMVVTREEFEENGHAVCEEK-FDI 396          
BLAST of NO02G02380 vs. NCBI_GenBank
Match: XP_018515650.1 (PREDICTED: LOW QUALITY PROTEIN: actin-related protein 6 [Lates calcarifer])

HSP 1 Score: 320.1 bits (819), Expect = 1.200e-83
Identity = 167/425 (39.29%), Postives = 256/425 (60.24%), Query Frame = 0
Query:   66 MPTLVLDNGAYHLKVGFAGDPAPRLLMPNCTAKLK-GQLQLLVGDDIDLVNNTANLQYTRPFDRGYLTNWEAENQVWKRAFGETNLKVEPEETRLVVTEAPFTPTSLSTFSTQVIFEEFGFAACAKLPAAILSGHHYTSTQPQQEPQPQCALLGGGRINCALVIDSGFSFTHVIPLYKNRAQRAGIRRVNVGGKLLTNFLKETVSYRQWNMMDEFQLMNDAKEALCYVSQDFVAEMAKLRPGGGPNRRLRAHEGIRRNFVLPDFHNTMKGYVQDEQPRLHEQYQEERKEEPEQQVLSMEVERFVVPEVLFRPSDVGLRQGGLPEAVVEAVESCDIGLRASLYSNIILTGGNVLFPGLAQRLKTELRALVPEYYSLAVHTPSDPIGYAWQGGGRFAQ--EQPQTFVTKAQYNEYGPEACQEHVFDV 488
            M TLVLDNGAY  K+G++ +     ++PNC  + K  +L+    + +D + + + L Y  PF +GYL NW+ + +VW   FG+   KVE  +T +++TE  F  TS+     +++FEE+ F +  +  A  L+ HHY  T+P +               C LV+DSGFSFTH++P  +++  + GIRR+NVGGKLLTN LKE +SYRQ ++MDE  ++N  KE +CYVSQ F  +M   +  G  N        + R++VLPDF +  KG+    +PR  E+     K +  +Q+L +  ERF VPE+LF PSD+G+++ G+PEA+V +++S    ++   Y +I+LTGGN LFPG  +RL+ ELR+LVP +  ++V  P++PI Y+W+GG   A   +  +  VT+  Y E G   C+E  FD+
Sbjct:    1 MATLVLDNGAYTAKIGYSQEKVS--VIPNCQFRSKTSRLKTFTANQLDEIKDPSGLFYILPFQKGYLVNWDVQRKVWDHLFGKEMFKVEFADTSVIITEPYFNFTSIQESMNEILFEEYQFQSALRTNAGFLAAHHYFHTKPSE--------------LCCLVVDSGFSFTHIVPYCRSKKMKEGIRRINVGGKLLTNHLKEIISYRQLHVMDETHVINQVKEDVCYVSQHFYKDMEVAQMKGEEN-------SVMRDYVLPDFSSIKKGFC---KPR--EEMVFNGKYKTGEQILRLANERFAVPEMLFHPSDIGIQEMGIPEAIVHSIQSLPDEMQPHFYQSIVLTGGNTLFPGFRERLEAELRSLVPAHLPVSVLLPANPICYSWEGGKLLAHNPDYDEMVVTREDYEENGHCICEEK-FDI 396          
BLAST of NO02G02380 vs. NCBI_GenBank
Match: XP_005937009.1 (PREDICTED: actin-related protein 6 [Haplochromis burtoni] >XP_004571528.2 actin-related protein 6 [Maylandia zebra])

HSP 1 Score: 319.3 bits (817), Expect = 2.100e-83
Identity = 169/425 (39.76%), Postives = 254/425 (59.76%), Query Frame = 0
Query:   66 MPTLVLDNGAYHLKVGFAGDPAPRLLMPNCTAKLK-GQLQLLVGDDIDLVNNTANLQYTRPFDRGYLTNWEAENQVWKRAFGETNLKVEPEETRLVVTEAPFTPTSLSTFSTQVIFEEFGFAACAKLPAAILSGHHYTSTQPQQEPQPQCALLGGGRINCALVIDSGFSFTHVIPLYKNRAQRAGIRRVNVGGKLLTNFLKETVSYRQWNMMDEFQLMNDAKEALCYVSQDFVAEMAKLRPGGGPNRRLRAHEGIRRNFVLPDFHNTMKGYVQDEQPRLHEQYQEERKEEPEQQVLSMEVERFVVPEVLFRPSDVGLRQGGLPEAVVEAVESCDIGLRASLYSNIILTGGNVLFPGLAQRLKTELRALVPEYYSLAVHTPSDPIGYAWQGGGRFAQ--EQPQTFVTKAQYNEYGPEACQEHVFDV 488
            M TLVLDNGAY  K+G++ +     ++PNC  + K  +L+    + +D + + + L Y  PF +GYL NW+ + +VW   FG+   KV+  +T +V+TE  F  TS+     +++FEE+ F +  ++ A  LS HHY  T P +               C +V+D+GFSFTH+ P  ++R  + GIRR+NVGGKLLTN LKE +SYRQ ++MDE  ++N  KE +CYVSQ F  +M   +  G  N  +       R++VLPDF +  KG+    +PR  E+     K +  +Q+L +  ERF VPE+LF PSD+G+++ G+PEA+V +VES    ++   Y N++LTGGN LFPG  +RL+ ELRALVP +  ++V  P++P+ YAW+GG   A   +  +  V +  Y E G   C+E  FD+
Sbjct:    1 MATLVLDNGAYTAKIGYSQEKVS--VIPNCQFRSKTSRLKTFTANQLDEIKDPSGLFYILPFQKGYLVNWDVQRKVWDHLFGKEMFKVDFADTSVVITEPYFNFTSIQESMNEILFEEYQFQSALRINAGSLSAHHYFHTNPSE--------------LCCMVVDTGFSFTHIAPYCRSRKMKEGIRRINVGGKLLTNHLKEIISYRQLHVMDETHVINQVKEDVCYVSQQFYKDMEIAQAKGEENTAM-------RDYVLPDFSSIKKGFC---KPR--EEMVFSGKYKTGEQILRLANERFAVPEMLFHPSDIGIQEMGIPEAIVHSVESLPEEMQPHFYRNVVLTGGNTLFPGFRERLEAELRALVPAHLPVSVVFPANPVCYAWEGGKLLAHNPDYDEMVVMREDYEENGHCICEEK-FDI 396          
BLAST of NO02G02380 vs. NCBI_GenBank
Match: XP_022291188.1 (actin-related protein 6-like [Crassostrea virginica])

HSP 1 Score: 318.9 bits (816), Expect = 2.700e-83
Identity = 169/425 (39.76%), Postives = 253/425 (59.53%), Query Frame = 0
Query:   66 MPTLVLDNGAYHLKVGFAGDPAPRLLMPNCTAKLKG-QLQLLVGDDIDLVNNTANLQYTRPFDRGYLTNWEAENQVWKRAFGETNLKVEPEETRLVVTEAPFTPTSLSTFSTQVIFEEFGFAACAKLPAAILSGHHYTSTQPQQEPQPQCALLGGGRINCALVIDSGFSFTHVIPLYKNRAQRAGIRRVNVGGKLLTNFLKETVSYRQWNMMDEFQLMNDAKEALCYVSQDFVAEMAKLRPGGGPNRRLRAHEGIRRNFVLPDFHNTMKGYVQDEQPRLHEQYQEERKEEPEQQVLSMEVERFVVPEVLFRPSDVGLRQGGLPEAVVEAVESCDIGLRASLYSNIILTGGNVLFPGLAQRLKTELRALVPEYYSLAVHTPSDPIGYAWQGGGRFA--QEQPQTFVTKAQYNEYGPEACQEHVFDV 488
            M T+VLDNGA   KVG+A D  PR ++PNC  K K  + ++ +GD ID   + + L Y  PF +GYL NW+ E QVW   FG+  LKV+  ET ++VTE  F   S+     ++ FEE+ F +  K   + LS + Y     +++  P           C++V+D+G+SF+HV+P ++ +     ++RVNVGGK+LTN LKE +SYRQ  +MDE  ++N  KE +CYVS  F  +M   +  G  N        I R++VLPD+ +  +GYV+ ++       +   K +  +Q++ M  ERF VPE+LF PSDVG+++ G+ EA+V A+ +    ++  +YSNIILTGGN L PG + R  +E+R++ PE Y + V TP++PI YAW+GG   A  ++  +  VT+ QY EYG   C E  FD+
Sbjct:    2 MATVVLDNGAGTAKVGYATDKEPR-IVPNCVTKAKNVRTRIFIGDQIDDCKDLSGLYYLLPFQKGYLVNWDIERQVWDYLFGKDALKVDFNETNIIVTEPYFNFNSVQEAMNEIFFEEYAFKSVLKTNPSFLSQYKYN----KEKNAPPL---------CSVVLDTGYSFSHVVPYFRGKKMSESVKRVNVGGKVLTNHLKEVISYRQLMVMDETYVINQVKEDVCYVSSQFTKDMEIAKKRGKENT-------IARDYVLPDYTHIKRGYVRPQE-------ETTGKAKDGEQIIRMNNERFAVPELLFHPSDVGVQEMGVAEALVYAISTLPEEMQPHMYSNIILTGGNCLLPGFSDRFYSEVRSMAPEEYEITVKTPNNPITYAWEGGSLLANTEDYKKMAVTREQYEEYGHTICSE-TFDI 397          
BLAST of NO02G02380 vs. NCBI_GenBank
Match: XP_002593883.1 (hypothetical protein BRAFLDRAFT_75660 [Branchiostoma floridae] >EEN49894.1 hypothetical protein BRAFLDRAFT_75660 [Branchiostoma floridae])

HSP 1 Score: 318.5 bits (815), Expect = 3.500e-83
Identity = 174/424 (41.04%), Postives = 246/424 (58.02%), Query Frame = 0
Query:   67 PTLVLDNGAYHLKVGFAGDPAPRLLMPNCTAKLKGQ-LQLLVGDDIDLVNNTANLQYTRPFDRGYLTNWEAENQVWKRAFGETNLKVEPEETRLVVTEAPFTPTSLSTFSTQVIFEEFGFAACAKLPAAILSGHHYTSTQPQQEPQPQCALLGGGRINCALVIDSGFSFTHVIPLYKNRAQRAGIRRVNVGGKLLTNFLKETVSYRQWNMMDEFQLMNDAKEALCYVSQDFVAEMAKLRPGGGPNRRLRAHEGIRRNFVLPDFHNTMKGYVQDEQPRLHEQYQEERKEEPEQQVLSMEVERFVVPEVLFRPSDVGLRQGGLPEAVVEAVESCDIGLRASLYSNIILTGGNVLFPGLAQRLKTELRALVPEYYSLAVHTPSDPIGYAWQGGGRFAQEQ--PQTFVTKAQYNEYGPEACQEHVFDV 488
            P LVLDNGAY  KVGF+ +  PRL+ PNC  K K +  +  VG+ ID   + + L Y  PF +GYL NW+ + QVW   F +  L V   +T  +VTE  F  TS+     ++ FEE+ F A  +   +  S H Y+S Q Q++P             C +V+D+G+SFTH+ P  + +  + GIRR+NVGGK+LTN LKE +SYRQ +++DE  +MN  KE +CYVS  F  +M   +  G  N        + R++VLPDF    +GYV+       E+     K +  +Q++ M  ERF VPEVLF PSD+G+++ G+PEA+V AVE+C   +   +Y NIILTGGN L  G  +R+ ++LRALVP+   + VH P  PI YAW+ G   +      +  VT+ QY+E+G   C E  FDV
Sbjct:    3 PVLVLDNGAYTAKVGFSTEKEPRLI-PNCVMKSKAERRKTFVGNQIDECKDLSGLFYVLPFQKGYLVNWDVQRQVWDHIFSKDVLNVNFADTVAMVTEPFFNFTSIQESMNEIFFEEYQFKALQRANGSTWSAHRYSSAQ-QKKPL------------CCVVVDTGYSFTHITPYCRGKKMKDGIRRLNVGGKMLTNHLKEIISYRQLHVLDETYVMNQVKEDVCYVSSQFYRDMETAKLRGKDNT-------VLRDYVLPDFSQIKRGYVKP-----LEEMNYAGKYKGGEQIIRMANERFAVPEVLFHPSDIGIQEMGIPEAIVHAVEACPEEMHPHMYMNIILTGGNALLSGFKERVFSDLRALVPQQLEVKVHQPDHPITYAWEAGVALSNTAGFDKMLVTRQQYDEFGQNICSER-FDV 399          
BLAST of NO02G02380 vs. NCBI_GenBank
Match: XP_016605538.1 (hypothetical protein SPPG_07413 [Spizellomyces punctatus DAOM BR117] >KNC97498.1 hypothetical protein SPPG_07413 [Spizellomyces punctatus DAOM BR117])

HSP 1 Score: 318.5 bits (815), Expect = 3.500e-83
Identity = 173/419 (41.29%), Postives = 237/419 (56.56%), Query Frame = 0
Query:   68 TLVLDNGAYHLKVGFAGDPAPRLLMPNCTAKLKGQLQLLVGDDIDLVNNTANLQYTRPFDRGYLTNWEAENQVWKRAFGETNLKVEPEETRLVVTEAPFTPTSLSTFSTQVIFEEFGFAACAKLPAAILSGHHYTSTQPQQEPQPQCALLGGGRINCALVIDSGFSFTHVIPLYKNRAQRAGIRRVNVGGKLLTNFLKETVSYRQWNMMDEFQLMNDAKEALCYVSQDFVAEMAKLRPGGGPNRRLRAHEGIRRNFVLPDFHNTMKGYVQDEQPRLHEQYQEERKEEPEQQVLSMEVERFVVPEVLFRPSDVGLRQGGLPEAVVEAVESCDIGLRASLYSNIILTGGNVLFPGLAQRLKTELRALVPEYYSLAVHTPSDPIGYAWQGGGRFAQEQPQTF----VTKAQYNEYGPEACQE 483
            TLV+DNGAY +K GFA  P    L  NC AK KG  +  +GD +    + + L    PF++GYLTNWE +  +W+R F    L V   ET L++TE  F    +     ++IFEEFGFAA  +  AA L  +  T+ +  +               C LV+DSG+SFTH++P+Y  R     ++R++VGGKLLTN LKET+S+RQWNMMDE  L+N  KE  CYVSQ F  E+   +          A   ++  +VLPD      GYV+          ++     P+QQVL M  ERF VPEVLF PSD+G++Q GL EA+VEAV++ D  L    ++N+ L GGN+  PGL  RL+++LR LVP    + V     PI  AW+GG ++ Q+ P  F    VT+A + EYG   C+E
Sbjct:    5 TLVVDNGAYTIKCGFAERPETLRLSRNCVAKAKGDRRTFIGDQLGDCRDYSGLFIRVPFEKGYLTNWEIQKTIWERLFSSDVLDVNASETNLLLTEPCFNLPIIQRNYDEIIFEEFGFAAYHRTAAANLCKYTLTTNEVAE---------------CMLVVDSGYSFTHIVPIYAGRPIWEAVKRIDVGGKLLTNQLKETISFRQWNMMDETYLVNGIKELCCYVSQQFEYELKVCK---------SADSSVKLEYVLPDLAANAHGYVRP---------KDGPPVRPDQQVLVMNNERFTVPEVLFNPSDIGIQQAGLAEAIVEAVQNTDPNLHGLFFNNVFLAGGNICLPGLKNRLESDLRKLVPVEADVRVIQAERPITAAWEGGVKWIQQYPNDFNQKCVTRADFMEYGSNLCEE 390          
BLAST of NO02G02380 vs. NCBI_GenBank
Match: AAQ83895.1 (actin-related protein 6 [Branchiostoma belcheri tsingtauense])

HSP 1 Score: 318.2 bits (814), Expect = 4.600e-83
Identity = 174/424 (41.04%), Postives = 246/424 (58.02%), Query Frame = 0
Query:   67 PTLVLDNGAYHLKVGFAGDPAPRLLMPNCTAKLKGQ-LQLLVGDDIDLVNNTANLQYTRPFDRGYLTNWEAENQVWKRAFGETNLKVEPEETRLVVTEAPFTPTSLSTFSTQVIFEEFGFAACAKLPAAILSGHHYTSTQPQQEPQPQCALLGGGRINCALVIDSGFSFTHVIPLYKNRAQRAGIRRVNVGGKLLTNFLKETVSYRQWNMMDEFQLMNDAKEALCYVSQDFVAEMAKLRPGGGPNRRLRAHEGIRRNFVLPDFHNTMKGYVQDEQPRLHEQYQEERKEEPEQQVLSMEVERFVVPEVLFRPSDVGLRQGGLPEAVVEAVESCDIGLRASLYSNIILTGGNVLFPGLAQRLKTELRALVPEYYSLAVHTPSDPIGYAWQGGGRFAQEQ--PQTFVTKAQYNEYGPEACQEHVFDV 488
            P LVLDNGAY  KVGF+ +  PRL+ PNC  K K +  +  VG+ ID   + + L Y  PF +GYL NW+ + QVW   F +  L V   +T  +VTE  F  TS+     ++ FEE+ F A  +   +  S H Y+S Q Q++P             C +V+D+G+SFTH+ P  + +  + GIRR+NVGGK+LTN LKE +SYRQ +++DE  +MN  KE +CYVS  F  +M   +  G  N        + R++VLPDF    +GYV+       E+     K +  +Q++ M  ERF VPEVLF PSD+G+++ G+PEA+V AVE+C   +   +Y NIILTGGN L  G  +R+ ++LRALVP+   + VH P  PI YAW+ G   +      +  VT+ QY+EYG   C +  FDV
Sbjct:    3 PVLVLDNGAYTAKVGFSTEKEPRLI-PNCVMKSKSERRKTFVGNQIDECKDLSGLFYVLPFQKGYLVNWDVQRQVWDHIFSKDVLNVNFADTVAMVTEPFFNFTSIQESMNEIFFEEYQFKALQRANGSTWSAHKYSSAQ-QKKPL------------CCVVVDTGYSFTHITPCCRGKKMKDGIRRLNVGGKMLTNHLKEIISYRQLHVLDETYVMNQVKEDVCYVSSQFYKDMETAKLRGKDNT-------VLRDYVLPDFSQIKRGYVKP-----LEEMNYAGKYKGGEQIIRMANERFAVPEVLFHPSDIGIQEMGIPEAIVHAVEACPEEMHPHMYMNIILTGGNALLSGFKERVFSDLRALVPQQLEVRVHQPDHPITYAWEAGVALSNTPGFDKMLVTRQQYDEYGQNICSDK-FDV 399          
The following BLAST results are available for this feature:
BLAST of NO02G02380 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30427.11.000e-17567.54actin-related protein 6 [Nannochloropsis gaditana][more]
CDH52255.11.400e-8439.76arp6 actin-related protein 6 homolog [Lichtheimia ... [more]
XP_022293675.17.100e-8440.00actin-related protein 6-like [Crassostrea virginic... [more]
XP_015820583.19.200e-8440.00PREDICTED: actin-related protein 6 [Nothobranchius... [more]
XP_018515650.11.200e-8339.29PREDICTED: LOW QUALITY PROTEIN: actin-related prot... [more]
XP_005937009.12.100e-8339.76PREDICTED: actin-related protein 6 [Haplochromis b... [more]
XP_022291188.12.700e-8339.76actin-related protein 6-like [Crassostrea virginic... [more]
XP_002593883.13.500e-8341.04hypothetical protein BRAFLDRAFT_75660 [Branchiosto... [more]
XP_016605538.13.500e-8341.29hypothetical protein SPPG_07413 [Spizellomyces pun... [more]
AAQ83895.14.600e-8341.04actin-related protein 6 [Branchiostoma belcheri ts... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR002ngnoR002Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G02380.1NO02G02380.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100210g13gene242Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G02380.1NO02G02380.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G02380 ID=NO02G02380|Name=NO02G02380|organism=Nannochloropsis oceanica|type=gene|length=3576bp
TACCTTTCGACGCTCGACCGGACAGAAACCATTTTCCCAAGCAGTGAGAT
GATATACAGGCAAGGGCAAGTCAAGAACGAGAGGGGAAGGATGGGAGACG
TCGCCCCATCTCATTGTGAAGCGCACGAGTACAAGGGTGTCCTCCTTCCT
TTCTCTCAAAGGTGATGGTCCTGGCGTGCTTGTTGGTGATGCCGCTCTGC
CTTCGACCGTACATGCCTCTCTGTCCTTCTTTCTTTTTCTTCCCTTTCTC
GTTTTATTTCTGGCTCCCCCCTTCTCTTGCCTTCCCCCCAGCCCTCGCCA
GCCACAACACAGACCTCTCCTCTTGCTACACATCACCTCCTCCTCCTCCC
TGCACCTTTTCTTTCTCACCCTCTTGGTTTACCGCTGGCTTCCTCCACTC
TGTATCAACGCCTGCAACGCCGCCCTCTCTTCGGGCGAGGCCGACTTGGC
CAAGGCCTGGTGCATGGCACGGTTATCTTCCAACGTCATCACCCGCCCCG
TTTGAATGTCCTGGACCAATAAATACATCCATTGTCCCTTGGGCATGTCT
GATGTCACCTCTGCAAATACAAACGCGTGTCCAAATGGCCCTTCAATGTT
AAAGCGAATCCGCAGCCTCTTACTCCCATCCTCCCCCACATAATTCTTAT
GCTCCACAAAATTTCTGCGTCCCTCCCGCCGTCCCCCCCCATCCCGGCCG
TAACCTTTCAATGGCTCCCCGTACCGATTCAACACGTCATGGTTTTGTTT
CACTGCGTCGAATGCCTCGTTAAAGAGGTGGTTGGCGCTCGTGCGACTGG
GCATGAGCTCGTCCACGATAAAGTACAAGGAACCCGCCGCAATGACGGCC
ACGGTTAGGTAAGCTAATCCACGCATGAACCCTATCTTTTCCCCATCCTC
CGGCGGGCCCTCGGTTTCCGGTTCTTCTTCTTCTTGCTGTTGCTTCTCTT
GGTTTTTCTCTTCCTCTTCCTCCTCCTTTCTTCCCCCCGCATCCTCGTTC
TTGGTGCTAAAACCTGCTGCCGCTGGAGACGATGGGTTGCCTCCTCTGCT
TTGACCCCGCCAGCCACCGGTCCGCCGCATGCATCCATTCATCTGTGTGC
CCAGCAACGGGACCAGCATCGAAGAGGGCTGGTAGCGCTTGGGAAGGAGG
AGGTGTGTGGTGGCAGTGGTGGGGAGACCAGTCGAAGCAGATGATACTCC
GCCTGTCGAAAGAGGTCTACGAGCCGCTCCCCCTCTTGCCCTGGCCAACA
GCGCGCGACGGGTAGATGGTCCTGCGGCCTTCGTCACGACGATTACAAGG
CCTGCCATGCTGCTGGTGCTGTGGTGCTGTGGTGGTGGTATCAAGAAGGA
TCGAGAAAACTTGGTTAAGAGATGATATTGACTTGAGACTTGCCTTAAAA
AGAAGTGGAACTGCGACCTCCTCGCTAGCTTCGTCGTGGCCCGCTTGTTT
CTCCTCTCGTTCAGCACAAATTCACACACTCAGGCTCGCACAGTCGCATG
CGTATATATGACATTCTCTCCTCTCCAATTTTGTTACGCAGGGGGTCGCG
GGATTGAGCACGCGAGGTTGGAAGAGGCAGGAGCCAGGAGGCAAGGGGCG
AGAATGCCGGCAGCCGCACCAGTCGCTTCGCCACGTAAAGGAGGGCACAA
AGTACACACCAGCAGCAACAGGGTAGCAGGAGGAGGGGAAGGGCAAGGTA
ATATGCCTACGCTAGTGCTGGACAACGGGGCGTACCACCTTAAAGTGGGC
TTTGCAGGAGACCCTGCGCCCCGCCTTCTCATGCCCAACTGCACGGCCAA
GCTCAAGGGCCAGCTTCAGgtgagtggaattaggatagcttactcttgaa
aagtccatgttacggcaatctgaatgctgcgtgcccgctggctccaaccg
aagagagataaggctggtcatatcaggcaacctacctgcgacgcaccatc
ccctcacgcagcccattcccgtctacctctcctctcaccttctccgctca
gTTGCTGGTAGGCGACGATATTGACCTAGTGAACAACACGGCTAATCTTC
AATACACGCGGCCGTTCGATCGCGGCTATCTGACCAATTGGGAGGCCGAG
AACCAAGTGTGGAAGCGGGCCTTTGGAGAGACCAACCTTAAAgtacgtat
gtgacttgatacccaggacagtgggggaggacgcgagataagacgtaaga
taagaggtgaagggttcatggaaaggggggccttcaatcgagaaagaaat
gtgccgcttgttttccatcttttgtcagctgttgtcccggctctttgtcg
tcgtggtgcgcttgctacgtcttgactccccttgccaagcgcggccgtgc
ctcttattttcacacggaagtagaatttttttctcccatgttttcttcct
ccttcctatacctctggcactggcctcctttgtaaagcttcatttgtttt
tcatcattcacattccttcatctctccaccaccgcaacgcacacacgcac
agGTAGAACCCGAAGAGACCCGCTTGGTAGTGACCGAGGCGCCCTTTACT
CCCACAAGCCTCTCAACCTTCAGTACCCAAGTCATTTTCGAAGAATTCGG
ATTCGCGGCTTGTGCCAAGCTGCCTGCTGCTATTCTTTCCGGCCATCACT
ACACCTCAACCCAACCTCAGCAGGAACCCCAGCCGCAATGTGCCTTATTA
GGAGGAGGTAGAATTAATTGTGCCTTGGTCATAGACTCAGGCTTCAGCTT
TACACACGTTATACCCTTGTATAAAAACAGGGCCCAACGTGCAGGGATCC
GCCGCGTGAACGTGGGGGGGAAACTTCTGACCAACTTTTTGAAAGAGACC
GTTTCTTACCGACAGTGGAATATGATGGATGAATTTCAACTCATGAATGA
TGCGAAGGAGGCTTTGTGTTATGTGAGTCAAGACTTCGTGGCGGAAATGG
CTAAGCTCCGACCGGGGGGCGGGCCGAACCGACGCCTGCGTGCTCATGAG
GGGATACGACGAAATTTTGTTTTGCCTGATTTTCATAACACCATGAAGGG
GTATGTCCAAGACGAACAGCCGCGGCTGCATGAGCAATATCAGGAAGAGC
GAAAGGAAGAACCAGAACAGCAGGTGCTGTCGATGGAGGTGGAACGTTTC
GTCGTTCCTGAGGTGTTGTTCCGACCTTCAGATGTGGGTCTCCGTCAGGG
CGGCCTTCCTGAAGCGGTGGTCGAGGCTGTGGAATCCTGCGACATCGGGT
TGCGGGCGTCCTTGTACAGCAACATTATTCTAACGGGAGGGAATGTCTTA
TTTCCCGGCTTGGCGCAACGTCTGAAGACAGAGCTACGGGCTTTGGTGCC
TGAGTACTACTCTCTGGCCGTGCATACTCCGTCTGATCCCATCGGGTATG
CGTGGCAAGGAGGGGGTCGCTTTGCCCAGGAACAACCGCAAACGTTTGTG
ACCAAGGCACAGTACAATGAGTATGGTCCAGAGGCCTGCCAGGAGCATGT
GTTTGATGTGCAGTGGTAGACTGAAAGGATAAAAGAAGATATGGAATGGG
CCTTGTACACATAACCTCTTTTGCCA
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protein sequence of NO02G02380.1

>NO02G02380.1-protein ID=NO02G02380.1-protein|Name=NO02G02380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=490bp
MTFSPLQFCYAGGRGIEHARLEEAGARRQGARMPAAAPVASPRKGGHKVH
TSSNRVAGGGEGQGNMPTLVLDNGAYHLKVGFAGDPAPRLLMPNCTAKLK
GQLQLLVGDDIDLVNNTANLQYTRPFDRGYLTNWEAENQVWKRAFGETNL
KVEPEETRLVVTEAPFTPTSLSTFSTQVIFEEFGFAACAKLPAAILSGHH
YTSTQPQQEPQPQCALLGGGRINCALVIDSGFSFTHVIPLYKNRAQRAGI
RRVNVGGKLLTNFLKETVSYRQWNMMDEFQLMNDAKEALCYVSQDFVAEM
AKLRPGGGPNRRLRAHEGIRRNFVLPDFHNTMKGYVQDEQPRLHEQYQEE
RKEEPEQQVLSMEVERFVVPEVLFRPSDVGLRQGGLPEAVVEAVESCDIG
LRASLYSNIILTGGNVLFPGLAQRLKTELRALVPEYYSLAVHTPSDPIGY
AWQGGGRFAQEQPQTFVTKAQYNEYGPEACQEHVFDVQW*
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Synonyms
Publications