NO02G02100, NO02G02100 (gene) Nannochloropsis oceanica

Overview
NameNO02G02100
Unique NameNO02G02100
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length978
Alignment locationchr2:596335..597312 -

Link to JBrowse

Properties
Property NameValue
DescriptionNuclear migration protein nudC putative
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:596335..597312 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008978HSP20-like_chaperone
IPR037898NudC_fam
IPR025934NudC_N_dom
IPR007052CS_dom
Homology
[Close]
BLAST of NO02G02100 vs. NCBI_GenBank
Match: EWM30519.1 (nuclear migration protein nudC putative [Nannochloropsis gaditana])

HSP 1 Score: 409.1 bits (1050), Expect = 1.300e-110
Identity = 220/331 (66.47%), Postives = 245/331 (74.02%), Query Frame = 0 
Query:    2 EEGRFDPLLLNIAQQCQGIDELLEVFLSFLRRKTDFYTGATADKVEETVRYAVRKQMALVERTMQEQ---RQA----REXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSDGTFDVXXXXXXXXIEKKANSKKAEDNPDNVKEGEEAEVKEAPPGNGGTTEHYVWTQQLAEVTVNVPVPVGTRSRDLVVDIGKKRLRVGLKGQPPMVDGELHKPVKVDDSFWTVEDGREVVVNLQKENGMEWWKCVVVGDPEIDTSKVNPENSKLSDLDAETRQTVEKMMFDQRQKQMGLPTSEELKKREMLEKFMKQHPEMDFSGASIK 326
            E+GRFDPLLLNIAQQCQGID LLEVFLSFLRRKTDFYTGATA KVEET+  AVRKQM + ERT QE+   R+A    RE                                        G+DG+FDV            A  +  E+ P    +GEE E +EAPPGNGG T+ Y+WTQQLAEVT+NVPVPVGTRSRDL VDIGKKRLRV LKG P +V+GEL+KP+KVDDSFWT+EDGREVV++LQKENGMEWWKC + GDPEIDTSKV+PENSKLSDLDAETRQTVEKMMFDQRQKQMGLPTS+E KKREMLEKFMKQHPEMDFSGA+IK
Sbjct:   15 EDGRFDPLLLNIAQQCQGIDGLLEVFLSFLRRKTDFYTGATASKVEETILAAVRKQMGMAERTQQEELRTREAEEARREERMRMAKLKGKANQKAKDSNAVTMDAATSSHTSQTNVVELGADGSFDV--------ASTAATKEPKEEKPKLDADGEE-EKEEAPPGNGGATDRYIWTQQLAEVTINVPVPVGTRSRDLSVDIGKKRLRVALKGGPTLVEGELYKPIKVDDSFWTLEDGREVVISLQKENGMEWWKCAIAGDPEIDTSKVSPENSKLSDLDAETRQTVEKMMFDQRQKQMGLPTSDEQKKREMLEKFMKQHPEMDFSGATIK 336
[Close]
BLAST of NO02G02100 vs. NCBI_GenBank
Match: XP_008879598.1 (hypothetical protein H310_13749 [Aphanomyces invadans] >ETV91672.1 hypothetical protein H310_13749 [Aphanomyces invadans])

HSP 1 Score: 274.6 bits (701), Expect = 3.900e-70
Identity = 186/325 (57.23%), Postives = 221/325 (68.00%), Query Frame = 0 
Query:    2 EEGRFDPLLLNIAQQCQGIDELLEVFLSFLRRKTDFYTGATADKVEETVRYAVRKQMALVERTMQEQRQAREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSDGTFDVXXXXXXXXIEKKANSKKAEDNPDNVKEGEEAEVKEAPP--GNGGTTEHYVWTQQLAEVTVNVPVPVGTRSRDLVVDIGKKRLRVGLKGQPPMVDGELHKPVKVDDSFWTVEDGREVVVNLQKENGMEWWKCVVVGDPEIDTSKVNPENSKLSDLDAETRQTVEKMMFDQRQKQMGLPTSEELKKREMLEKFMKQHPEMDFSGASI 325
            +E RFD LL+ +AQQ  GI+ +L     FLRRKTDF++GAT + +E+ V   VRK+ A+ ER   ++     XXXXXXXXXXXXXXXXXXXXXXXX                        XXXXXXXX    A     +D+ D+           APP  GNGG T++YVWTQ L E  V +PVP GT S+ +VVD+  K L+VGLK QP +VDG+LHK +KV+DSFWT+ED   + V LQKEN MEWWKC++VGD EIDT KV PENSKLSDLD ETRQTVEKMMFDQRQKQMGLPTS+EL K+E+L KFMK HPEMDFS A I
Sbjct:    3 DEQRFDGLLMQMAQQQNGIEPMLTSVFGFLRRKTDFFSGATQEAIEQMVLTVVRKESAIAERERYDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRFEEITDDEDVVPSVPVKXXXXXXXXXXXXXXPAPAGDNAEDDDKDD----------GAPPLEGNGGKTDNYVWTQTLQEAHVTIPVPQGTTSKQVVVDLRSKTLKVGLKSQPLIVDGDLHKKIKVEDSFWTLEDNNRICVYLQKENQMEWWKCIMVGDVEIDTKKVQPENSKLSDLDGETRQTVEKMMFDQRQKQMGLPTSDELGKQEILNKFMKAHPEMDFSKAKI 317
[Close]
BLAST of NO02G02100 vs. NCBI_GenBank
Match: XP_008614436.1 (hypothetical protein SDRG_10233 [Saprolegnia diclina VS20] >EQC32034.1 hypothetical protein SDRG_10233 [Saprolegnia diclina VS20])

HSP 1 Score: 270.4 bits (690), Expect = 7.300e-69
Identity = 180/325 (55.38%), Postives = 212/325 (65.23%), Query Frame = 0 
Query:    1 MEEGRFDPLLLNIAQQCQGIDELLEVFLSFLRRKTDFYTGATADKVEETVRYAVRKQMALVERTMQEQRQAREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSDGTFDVXXXXXXXXIEKKANSKKAEDNPDNVKEGEEAEVKEAP-PGNGGTTEHYVWTQQLAEVTVNVPVPVGTRSRDLVVDIGKKRLRVGLKGQPPMVDGELHKPVKVDDSFWTVEDGREVVVNLQKENGMEWWKCVVVGDPEIDTSKVNPENSKLSDLDAETRQTVEKMMFDQRQKQMGLPTSEELKKREMLEKFMKQHPEMDFSGASI 325
            M + RFD LLL +AQQ QGI+ +L    SFLRRKTDFY GA+ DKVE+ V   +R++ AL ER   ++     XXXXXXXXXXXXXXXXXXXXXXXX                      ++        +E K  +                     P  GNGG TEHYVWTQ L E  V++ VP GT SR +  DI  K L+VGLKGQP +VDGELHK VKV+DSFWT+EDG  + + LQKEN MEWWK V+ GDPEI+T KV PENSKLSDLD +TRQTVEKMMFDQRQKQMGLPTS+EL K+E+L+KFM  HPEMDFS A +
Sbjct:    1 MADERFDGLLLQMAQQQQGIEPMLTSVFSFLRRKTDFYAGASQDKVEQMVLNVLRREAALAERERYDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMESRFE----------------EIVDEQPAPVLEAKPIATXXXXXXXXXXXXXXXXXXXPPLEGNGGKTEHYVWTQTLQEAHVSIAVPNGTTSRQVFADIRAKTLKVGLKGQPLLVDGELHKRVKVEDSFWTLEDGNRICIYLQKENQMEWWKNVIQGDPEINTKKVQPENSKLSDLDGDTRQTVEKMMFDQRQKQMGLPTSDELSKQEILKKFMAAHPEMDFSKAKL 309
[Close]
BLAST of NO02G02100 vs. NCBI_GenBank
Match: XP_012200397.1 (hypothetical protein SPRG_05723 [Saprolegnia parasitica CBS 223.65] >KDO28852.1 hypothetical protein SPRG_05723 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 268.1 bits (684), Expect = 3.600e-68
Identity = 182/326 (55.83%), Postives = 213/326 (65.34%), Query Frame = 0 
Query:    1 MEEGRFDPLLLNIAQQCQGIDELLEVFLSFLRRKTDFYTGATADKVEETVRYAVRKQMALVERTMQEQRQAREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSDGTFDVXXXXXXXXIEKK--ANSKKAEDNPDNVKEGEEAEVKEAPPGNGGTTEHYVWTQQLAEVTVNVPVPVGTRSRDLVVDIGKKRLRVGLKGQPPMVDGELHKPVKVDDSFWTVEDGREVVVNLQKENGMEWWKCVVVGDPEIDTSKVNPENSKLSDLDAETRQTVEKMMFDQRQKQMGLPTSEELKKREMLEKFMKQHPEMDFSGASI 325
            M + RFD LLL +AQQ QGI+ +L    SFLRRKTDFY GA+ DKVE+ V   +R++ AL ER   +      XXXXXXXXXXXXXXXXXXXXXXXXXXX                   ++        +E K  A                         GNGG TEHYVWTQ L E  V++ VP GT SR +  DI  K L+VGLKGQP +VDGELHK +KV+DSFWT+EDG  + + LQKEN MEWWK V+ GDPEI+T KV PENSKLSDLD +TRQTVEKMMFDQRQKQMGLPTS+EL K+E+L+KFM  HPEMDFS A +
Sbjct:    1 MADERFDGLLLQMAQQQQGIEPMLTSVFSFLRRKTDFYAGASQDKVEQMVLNVLRREAALAERERYDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFE----------------EIVDEPPAPVLEAKPMATPAXXXXXXXXXXXXXXXXXXXXXEGNGGKTEHYVWTQTLQEAHVSIAVPNGTTSRQVFADIRAKTLKVGLKGQPLLVDGELHKRIKVEDSFWTLEDGNRICIYLQKENQMEWWKNVIQGDPEINTKKVQPENSKLSDLDGDTRQTVEKMMFDQRQKQMGLPTSDELSKQEILKKFMAAHPEMDFSKAKL 310
[Close]
BLAST of NO02G02100 vs. NCBI_GenBank
Match: OQS04471.1 (nuclear migration protein nudC [Thraustotheca clavata])

HSP 1 Score: 268.1 bits (684), Expect = 3.600e-68
Identity = 194/324 (59.88%), Postives = 223/324 (68.83%), Query Frame = 0 
Query:    1 MEEGRFDPLLLNIAQQCQGIDELLEVFLSFLRRKTDFYTGATADKVEETVRYAVRKQMALVERTMQEQRQAREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSDGTFDVXXXXXXXXIEKKANSKKAEDNPDNVKEGEEAEVKEAPPGNGGTTEHYVWTQQLAEVTVNVPVPVGTRSRDLVVDIGKKRLRVGLKGQPPMVDGELHKPVKVDDSFWTVEDGREVVVNLQKENGMEWWKCVVVGDPEIDTSKVNPENSKLSDLDAETRQTVEKMMFDQRQKQMGLPTSEELKKREMLEKFMKQHPEMDFSGASI 325
            M + RFD LLL +AQQ QGI+ +L    SFLRRKTDF++GA+ DK+E+ V   +RK+ AL ER   +              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        XXXXXXXX                              GNGG TEHYVWTQ L E  V++ VP GT SR + VDI  + L+VGLKGQP +VDGELHK VKV+DSFWT+EDG  + + LQKEN MEWWKCV+ GDPEI+T KV PENSKLSDLD +TRQTVEKMMFDQRQKQMGLPTS+EL K+E+L+KFM  HPEMDFS A I
Sbjct:    1 MADERFDGLLLQMAQQQQGIEPMLTSVFSFLRRKTDFFSGASQDKIEQMVLQVLRKEAALAERERYD--------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNGGKTEHYVWTQTLQEAHVSIAVPNGTTSRMVAVDIRAQTLKVGLKGQPLLVDGELHKRVKVEDSFWTLEDGNRICIYLQKENQMEWWKCVINGDPEINTKKVQPENSKLSDLDGDTRQTVEKMMFDQRQKQMGLPTSDELSKQEILKKFMSAHPEMDFSKAKI 310
[Close]
BLAST of NO02G02100 vs. NCBI_GenBank
Match: XP_009530785.1 (hypothetical protein PHYSODRAFT_335134 [Phytophthora sojae] >EGZ13356.1 hypothetical protein PHYSODRAFT_335134 [Phytophthora sojae])

HSP 1 Score: 263.1 bits (671), Expect = 1.200e-66
Identity = 187/329 (56.84%), Postives = 227/329 (69.00%), Query Frame = 0 
Query:    2 EEGRFDPLLLNIAQQCQGIDELLEVFLSFLRRKTDFYTGATADKVEETVRYAVRKQMALVERTMQEQRQAREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSDGTFDVXXXXXXXXIEKKANSKKAEDNPDNV----KEGEEAEVKEAPP--GNGGTTEHYVWTQQLAEVTVNVPVPVGTRSRDLVVDIGKKRLRVGLKGQPPMVDGELHKPVKVDDSFWTVEDGREVVVNLQKENGMEWWKCVVVGDPEIDTSKVNPENSKLSDLDAETRQTVEKMMFDQRQKQMGLPTSEELKKREMLEKFMKQHPEMDFSGASI 325
            E  RFD +LL IAQ  +GI+ LL+   SFLRRKTDF+TGA    +E+T+  +VRKQ AL E         ++   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      D   +           K+A+ ++A  +P  V     EG+E E    PP  GNGG T+ YVWTQ L E  VN  VP GT+SR + V+I   +LRVGL+G  P VDG L+  VKVDDSFWT+EDG  + + LQK+N MEWWK ++ GD EIDT KV PENSKL DLD++TRQTVEKMMFDQRQK MGLPTS++++K+E+L+KFM QHPEMDFS A I
Sbjct:    3 ETDRFDSMLLTIAQSQRGIEPLLDTVFSFLRRKTDFFTGAEPQVIEDTILKSVRKQAALAE---------KDQFHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFEEITDDADVET----------KEASPEQA--SPQKVDAAANEGDEEE-DNGPPLVGNGGQTDKYVWTQTLQEAQVNFAVPEGTKSRQVDVEIRAGKLRVGLRGAEPFVDGSLYNKVKVDDSFWTLEDGNRICIYLQKDNQMEWWKTIIQGDAEIDTQKVQPENSKLDDLDSDTRQTVEKMMFDQRQKAMGLPTSDDMQKQEILQKFMAQHPEMDFSKAKI 309
[Close]
BLAST of NO02G02100 vs. NCBI_GenBank
Match: OQR82749.1 (nuclear migration protein nudC [Achlya hypogyna])

HSP 1 Score: 260.4 bits (664), Expect = 7.600e-66
Identity = 177/325 (54.46%), Postives = 208/325 (64.00%), Query Frame = 0 
Query:    1 MEEGRFDPLLLNIAQQCQGIDELLEVFLSFLRRKTDFYTGATADKVEETVRYAVRKQMALVERTMQEQRQAREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSDGTFDVXXXXXXXXIEKKANSKK-AEDNPDNVKEGEEAEVKEAPPGNGGTTEHYVWTQQLAEVTVNVPVPVGTRSRDLVVDIGKKRLRVGLKGQPPMVDGELHKPVKVDDSFWTVEDGREVVVNLQKENGMEWWKCVVVGDPEIDTSKVNPENSKLSDLDAETRQTVEKMMFDQRQKQMGLPTSEELKKREMLEKFMKQHPEMDFSGASI 325
            M + RFD LLL +AQ  QGI+ +L    SFLRRKTDF++GA+ DK+E+ V   VR+                 XXXXXXXXXXXXXXXXXXXXXXXXXXX                   D         +E K  +K                       GNGG TEHYVWTQ L E  V++PVP GT SR +  +I  K L+VGLKGQP +VDGELHK VKV+DSFWT+EDG  + + LQKEN +EWWKC++ GD EIDT KV PENSKLSDLD +TRQTVEKMMFDQRQKQMGLPTS+EL K+E+L+KFM  HPEMDFS A +
Sbjct:    1 MADERFDGLLLQMAQAQQGIEPMLTGVFSFLRRKTDFFSGASQDKIEQMVLTVVRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFEELPD------------DAPVSAPTPVVEAKPAAKTVTSXXXXXXXXXXXXXXXXXXEGNGGKTEHYVWTQTLQEAHVSIPVPEGTTSRQVAAEIRSKTLKVGLKGQPLIVDGELHKRVKVEDSFWTLEDGNRICIYLQKENQVEWWKCIIQGDAEIDTKKVQPENSKLSDLDGDTRQTVEKMMFDQRQKQMGLPTSDELNKQEILKKFMAAHPEMDFSKAKL 313
[Close]
BLAST of NO02G02100 vs. NCBI_GenBank
Match: XP_008911146.1 (hypothetical protein PPTG_15633 [Phytophthora parasitica INRA-310] >ETK78278.1 hypothetical protein L915_15622 [Phytophthora parasitica] >ETL31708.1 hypothetical protein L916_15518 [Phytophthora parasitica] >ETL84936.1 hypothetical protein L917_15340 [Phytophthora parasitica] >ETN03373.1 hypothetical protein PPTG_15633 [Phytophthora parasitica INRA-310] >ETO66829.1 hypothetical protein F444_16062 [Phytophthora parasitica P1976] >ETP07945.1 hypothetical protein F441_15907 [Phytophthora parasitica CJ01A1] >KUF79040.1 Nuclear migration protein nudC [Phytophthora nicotianae] >KUF96186.1 Nuclear migration protein nudC [Phytophthora nicotianae])

HSP 1 Score: 258.5 bits (659), Expect = 2.900e-65
Identity = 188/325 (57.85%), Postives = 225/325 (69.23%), Query Frame = 0 
Query:    2 EEGRFDPLLLNIAQQCQGIDELLEVFLSFLRRKTDFYTGATADKVEETVRYAVRKQMALVERTMQEQRQAREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSDGTFDVXXXXXXXXIEKKANSKKAEDNPDNVKEGEEAEVKEAPP--GNGGTTEHYVWTQQLAEVTVNVPVPVGTRSRDLVVDIGKKRLRVGLKGQPPMVDGELHKPVKVDDSFWTVEDGREVVVNLQKENGMEWWKCVVVGDPEIDTSKVNPENSKLSDLDAETRQTVEKMMFDQRQKQMGLPTSEELKKREMLEKFMKQHPEMDFSGASI 325
            E  RFD +LL IAQ  +GI+ LL+   SFLRRKTDF+TGA    VE+T+  +VRKQ AL E+                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        XXXXXXXX  ++A+ +K     D    GEE E    PP  GNGG T+ YVWTQ L E  VN  VP GT+SR + V+I   ++RVGL+G    VDG L+  VKVDDSFWT+EDG  + + LQK+N MEWWK ++ GDPEIDT KV PENSKL DLD++TRQTVEKMMFDQRQK MGLP+S++++K+E+L+KFM QHPEMDFS A I
Sbjct:    3 ETDRFDSMLLTIAQSQRGIEPLLDTVFSFLRRKTDFFTGAEPQVVEDTILKSVRKQAALAEKDQ----------------FHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQASPQKTATKAD----GEEKE-DNGPPLVGNGGQTDKYVWTQTLQEAQVNFAVPEGTKSRQVDVEIRAGKMRVGLRGGETFVDGPLYNKVKVDDSFWTLEDGNRICIYLQKDNQMEWWKTIIQGDPEIDTQKVQPENSKLDDLDSDTRQTVEKMMFDQRQKAMGLPSSDDMQKQEILQKFMAQHPEMDFSKAKI 306
[Close]
BLAST of NO02G02100 vs. NCBI_GenBank
Match: XP_002997582.1 (nuclear migration protein nudC, putative [Phytophthora infestans T30-4] >EEY68597.1 nuclear migration protein nudC, putative [Phytophthora infestans T30-4])

HSP 1 Score: 257.3 bits (656), Expect = 6.400e-65
Identity = 155/326 (47.55%), Postives = 200/326 (61.35%), Query Frame = 0 
Query:    2 EEGRFDPLLLNIAQQCQGIDELLEVFLSFLRRKTDFYTGATADKVEETVRYAVRKQMALVERTMQEQRQAREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSDGTFDVXXXXXXXXIEKKANSKKAEDNPDNVKE-GEEAEVKEAPP--GNGGTTEHYVWTQQLAEVTVNVPVPVGTRSRDLVVDIGKKRLRVGLKGQPPMVDGELHKPVKVDDSFWTVEDGREVVVNLQKENGMEWWKCVVVGDPEIDTSKVNPENSKLSDLDAETRQTVEKMMFDQRQKQMGLPTSEELKKREMLEKFMKQHPEMDFSGASI 325
            E  RFD +LL IAQ  +GI+ LL+   SFLRRKTDF+ GA +  +EET+  +V  Q A   R  ++Q +A+                               XXXXXXXXX  +   F+          ++    + +    +  KE G+E E    PP  GNGG T+ YVWTQ L E  +N  VP GT+SR + V+I   +LRVGL+G    VDG L+  VK+DDSFWT+EDG  + + LQK+N MEWWK +V GD EIDT KV PENSKL DLD++TRQTVEKMMFDQRQK MGLP+S+E++K+E+L+KFM QHPEMDFS A +
Sbjct:    3 ETDRFDSMLLTIAQSRRGIEPLLDTVFSFLRRKTDFFAGAESQVIEETILKSVLPQKATGSRKRRKQEEAQ----------------------------LEKXXXXXXXXXAKNPPRFEEITDGDNTETKEATPEQASPQEINTTKEVGDEEEEDNGPPLVGNGGQTDKYVWTQTLQEAQINFAVPEGTKSRQVDVEIRAGKLRVGLRGGETFVDGPLYNKVKMDDSFWTLEDGNRICIYLQKDNQMEWWKTIVQGDAEIDTQKVQPENSKLDDLDSDTRQTVEKMMFDQRQKAMGLPSSDEMQKQEILQKFMAQHPEMDFSKAKV 300
[Close]
BLAST of NO02G02100 vs. NCBI_GenBank
Match: XP_009840147.1 (hypothetical protein H257_14099 [Aphanomyces astaci] >ETV70435.1 hypothetical protein H257_14099 [Aphanomyces astaci])

HSP 1 Score: 256.9 bits (655), Expect = 8.300e-65
Identity = 186/326 (57.06%), Postives = 219/326 (67.18%), Query Frame = 0 
Query:    1 MEEGRFDPLLLNIAQQCQGIDELLEVFLSFLRRKTDFYTGATADKVEETVRYAVRKQMALVERTMQEQRQAREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSDGTFDVXXXXXXXXIEKKANSKKAEDNPDNVKEGEEAEVKEAPP--GNGGTTEHYVWTQQLAEVTVNVPVPVGTRSRDLVVDIGKKRLRVGLKGQPPMVDGELHKPVKVDDSFWTVEDGREVVVNLQKENGMEWWKCVVVGDPEIDTSKVNPENSKLSDLDAETRQTVEKMMFDQRQKQMGLPTSEELKKREMLEKFMKQHPEMDFSGASI 325
            M + RFD LL+ +AQQ  GI+ +L     FLRRKTDF++GAT D +E+ V   +RK+ A+ ER   +++            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        XXXXXXXX                            PP  GNGG TEHYVWTQ L E  V +PVP GT S+ ++VD+    L+ GLKGQP +VDG LHK +KV+DSFWT+ED   + + LQKEN MEWWK ++VG  EIDT KV PENSKLSDLD ETRQTVEKMMFDQRQKQMGLPTSEE+ K+++L KFMK HPEMDFS A I
Sbjct:    1 MSDERFDGLLMQMAQQQNGIEPMLSSVFGFLRRKTDFFSGATQDAIEQMVLSVLRKESAIAERERYDRK----------VQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTPPLEGNGGKTEHYVWTQTLQEAQVTIPVPQGTTSKQVLVDLRSTTLKAGLKGQPLLVDGTLHKKIKVEDSFWTLEDNNRICLYLQKENQMEWWKSIIVGHDEIDTKKVQPENSKLSDLDGETRQTVEKMMFDQRQKQMGLPTSEEMGKQDILNKFMKAHPEMDFSKAKI 316
The following BLAST results are available for this feature:
BLAST of NO02G02100 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30519.11.300e-11066.47nuclear migration protein nudC putative [Nannochlo... [more]
XP_008879598.13.900e-7057.23hypothetical protein H310_13749 [Aphanomyces invad... [more]
XP_008614436.17.300e-6955.38hypothetical protein SDRG_10233 [Saprolegnia dicli... [more]
XP_012200397.13.600e-6855.83hypothetical protein SPRG_05723 [Saprolegnia paras... [more]
OQS04471.13.600e-6859.88nuclear migration protein nudC [Thraustotheca clav... [more]
XP_009530785.11.200e-6656.84hypothetical protein PHYSODRAFT_335134 [Phytophtho... [more]
OQR82749.17.600e-6654.46nuclear migration protein nudC [Achlya hypogyna][more]
XP_008911146.12.900e-6557.85hypothetical protein PPTG_15633 [Phytophthora para... [more]
XP_002997582.16.400e-6547.55nuclear migration protein nudC, putative [Phytopht... [more]
XP_009840147.18.300e-6557.06hypothetical protein H257_14099 [Aphanomyces astac... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL020nonsL020Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR005ngnoR005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR002ngnoR002Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G02100.1NO02G02100.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100013g4gene202Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G02100.1NO02G02100.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G02100 ID=NO02G02100|Name=NO02G02100|organism=Nannochloropsis oceanica|type=gene|length=978bp
ATGGAGGAAGGCCGGTTTGATCCGCTTCTCCTCAACATTGCTCAGCAATG
TCAAGGTATCGACGAACTGCTGGAGGTCTTCTTGTCGTTTTTGCGGCGCA
AGACTGATTTTTATACAGGCGCCACGGCCGACAAGGTGGAGGAAACAGTG
CGGTACGCCGTACGAAAGCAAATGGCCCTGGTGGAACGCACCATGCAGGA
GCAACGCCAAGCCCGCGAGGCTGAGGAGAAGCGGCGCCAGGATCGCTTGC
GTGCTACCAAGCTGAAGGAAGCGGAGGAGCAGAAGGCTATGAAGAATGCG
GCAGCAACGACCTCTTCCTCCTCGTCTTTGGTGGAGGTGGGATCGGACGG
AACGTTTGATGTTTCTTCTTCTGCAGCAGCAGCGCCTATCGAGAAGAAGG
CAAACTCCAAGAAGGCTGAGGACAACCCTGATAATGTGAAGGAGGGAGAG
GAGGCAGAAGTCAAGGAAGCTCCTCCGGGGAACGGCGGGACCACGGAGCA
CTACGTCTGGACGCAGCAGCTGGCAGAGGTGACGGTAAATGTGCCCGTGC
CAGTCGGAACGCGCTCTCGTGATTTGGTGGTGGACATCGGGAAGAAACGT
TTGCGGGTTGGGTTGAAAGGACAGCCTCCGATGGTGGATGGGGAGTTGCA
CAAGCCTGTGAAGGTGGATGATTCGTTTTGGACCGTTGAGGATGGCCGGG
AGGTGGTGGTGAATCTGCAGAAGGAGAACGGGATGGAGTGGTGGAAGTGC
GTAGTGGTGGGTGATCCTGAAATCGATACCAGTAAAGTGAATCCTGAGAA
CTCCAAGTTGAGTGACCTGGACGCCGAGACGAGACAGACGGTGGAGAAGA
TGATGTTTGATCAGCGGCAGAAGCAGATGGGGCTCCCCACGTCGGAAGAG
TTGAAGAAGAGGGAGATGCTGGAAAAATTTATGAAACAACACCCGGAGAT
GGATTTTAGTGGGGCGTCGATAAAGTGA
back to top

protein sequence of NO02G02100.1

>NO02G02100.1-protein ID=NO02G02100.1-protein|Name=NO02G02100.1|organism=Nannochloropsis oceanica|type=polypeptide|length=326bp
MEEGRFDPLLLNIAQQCQGIDELLEVFLSFLRRKTDFYTGATADKVEETV
RYAVRKQMALVERTMQEQRQAREAEEKRRQDRLRATKLKEAEEQKAMKNA
AATTSSSSSLVEVGSDGTFDVSSSAAAAPIEKKANSKKAEDNPDNVKEGE
EAEVKEAPPGNGGTTEHYVWTQQLAEVTVNVPVPVGTRSRDLVVDIGKKR
LRVGLKGQPPMVDGELHKPVKVDDSFWTVEDGREVVVNLQKENGMEWWKC
VVVGDPEIDTSKVNPENSKLSDLDAETRQTVEKMMFDQRQKQMGLPTSEE
LKKREMLEKFMKQHPEMDFSGASIK*
back to top
Synonyms
Publications