NO02G02000, NO02G02000 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G02000 vs. NCBI_GenBank
Match: CBJ31384.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 157.9 bits (398), Expect = 6.300e-35 Identity = 109/326 (33.44%), Postives = 151/326 (46.32%), Query Frame = 0 Query: 106 SSSWPEVQCIVTNVFADAFPDWWRWPGDIQGDDDSSMDAPPSRPQDETWHMLWTWSKPRMESASLLAHQQVNHIPRSQDLTRKDFLVRHLDRHMALSSXXXXXXXGSRVCGRHQKSSSLLSYTKKSTYPFFHIMPQTFALPQAYTSFVATFRDGSSFSSSXXXXFSDNISIIKPFKASRGRGIKLVNGILDVIHSEPVVIQRYVSKPLLLNGY-IDLRL----------------------------------------NSSVQTRKTIRGQGPPLPGNHPLRSAPSADVGGSKLRLSYLWQHLRDGHGIDTSAVWSEIVGMILKS 391 S + PEV IVT+V + W + P TW++LWTWSKP ++ +SLL Q+VNH P S++LTRKD L +H+ R MA GR K FHIMPQTF LP +T FV+ F S +N+ I+KP SRGRGI+L++ I D+ +++ VV+QRY+ PLLL+GY DLRL NSS+Q R + PL A +++ GG+K LSYLW+ L G+D A+W+EI +++KS Sbjct: 703 SKARPEVYNIVTDVLNNRCQQW--------------EELPTGLGLKTTWNLLWTWSKPHIQYSSLLTWQKVNHFPNSRELTRKDLLNKHVSRFMAPG-------------GRLAKE--------------FHIMPQTFVLPHEFTLFVSAFTSSSG--------TRENLWIMKPVGMSRGRGIRLIDDIKDICYADKVVLQRYIGNPLLLDGYKFDLRLYVLVTSFNKLEAFIYKEGFARLSTHRYEKGAIDNRFIHLTNSSIQ-----RLNEAGAARDSPLNQAKTSEAGGTKTTLSYLWRRLA-ASGVDVGALWAEICSVVVKS 973
BLAST of NO02G02000 vs. NCBI_GenBank
Match: ETI32008.1 (hypothetical protein F443_21101 [Phytophthora parasitica P1569]) HSP 1 Score: 132.9 bits (333), Expect = 2.200e-27 Identity = 93/291 (31.96%), Postives = 131/291 (45.02%), Query Frame = 0 Query: 143 DAPPSRPQDETWHMLWTWSKPRMESASLLAHQQVNHIPRSQDLTRKDFLVRHLDRHMALSSXXXXXXXGSRVCGRHQKSSSLLSYTKKSTYPFFHIMPQTFALPQAYTSFVATFRDGSSFSSSXXXXFSDNISIIKPFKASRGRGIKLVNGILDVIHSEPVVIQRYVSKPLLLNGY-IDLRL----------------------------------------NSSVQ--TRKTIRGQGPPLPGNHPLRSAPSADVGGSKLRLSYLWQHLRDGHGIDTSAVWSEIVGMILKS 391 D P TW++LWTWSKPR+E +LL Q+VNH ++ LTRKD L +H+ +++A G+ +++ F I+P TF LP+ Y SFV F++ + NI I+KP SRGRGI LVN + VI+ E VVIQ Y++ P LL+GY DLRL NSS+Q + I G P+ A D GG+K L++LW+ L G+D V I ++LK+ Sbjct: 709 DHPAGLGLKTTWNLLWTWSKPRVERQTLLVWQKVNHFQHAKALTRKDCLKKHIGKYLAAG-------------GKLRQA--------------FDIIPPTFLLPKEYVSFVQAFQERGERLKRSGLSEAKNIWIMKPVALSRGRGISLVNDLSQVIYGEQVVIQEYIAAPKLLDGYKFDLRLYVLVTSFNPLEAFLYEEGFVRLCTRPYEDSDISNIFVHLTNSSIQKSNEEAITGSTNPIASMKEENEASQKDAGGTKTTLAFLWRRLA-AEGVDVEQVKRSIEEVVLKA 971
BLAST of NO02G02000 vs. NCBI_GenBank
Match: XP_009519861.1 (hypothetical protein PHYSODRAFT_480588 [Phytophthora sojae] >EGZ24573.1 hypothetical protein PHYSODRAFT_480588 [Phytophthora sojae]) HSP 1 Score: 132.5 bits (332), Expect = 2.800e-27 Identity = 95/284 (33.45%), Postives = 133/284 (46.83%), Query Frame = 0 Query: 153 TWHMLWTWSKPRMESASLLAHQQVNHIPRSQDLTRKDFLVRHLDRHMALSSXXXXXXXGSRVCGRHQKSSSLLSYTKKSTYPFFHIMPQTFALPQAYTSFVATFRDGSSFSSSXXXXFSDNISIIKPFKASRGRGIKLVNGILDVIHSEPVVIQRYVSKPLLLNGY-IDLRL----------------------------------------NSSVQ--TRKTIRGQGPPL--PGNHPL-RSAPSADVGGSKLRLSYLWQHLRDGHGIDTSAVWSEIVGMILKS 391 TW++LWTWSKPR+E +LLA Q+VNH ++ LTRKD L +H+ +++A GR +++ F I+P TF LP+ Y +FV F++ S + NI I+KP SRGRGI LVN + VI+ E VVIQ Y++ P LL+G+ DLRL NSS+Q + I G P+ NH A D GG+K L+YLW+ L G+D V I ++LK+ Sbjct: 82 TWNLLWTWSKPRVERQTLLAWQKVNHFQHAKALTRKDCLKKHIGKYLAAG-------------GRLRQA--------------FDIIPPTFLLPKEYVAFVQAFQERSERLRRSGLSEAKNIWIMKPVALSRGRGISLVNDLSQVIYGEQVVIQEYIAAPRLLDGFKFDLRLYVLVTSFNPLEAFLYDEGFVRLCTRPYEDSDISNIFVHLTNSSIQKDNEEAIAGSANPIASANNHKEGDEAAQKDAGGTKTTLAYLWRRLA-ADGVDVEQVKRSIEDVVLKA 337
BLAST of NO02G02000 vs. NCBI_GenBank
Match: ETL25856.1 (hypothetical protein L916_20358, partial [Phytophthora parasitica]) HSP 1 Score: 132.5 bits (332), Expect = 2.800e-27 Identity = 93/291 (31.96%), Postives = 131/291 (45.02%), Query Frame = 0 Query: 143 DAPPSRPQDETWHMLWTWSKPRMESASLLAHQQVNHIPRSQDLTRKDFLVRHLDRHMALSSXXXXXXXGSRVCGRHQKSSSLLSYTKKSTYPFFHIMPQTFALPQAYTSFVATFRDGSSFSSSXXXXFSDNISIIKPFKASRGRGIKLVNGILDVIHSEPVVIQRYVSKPLLLNGY-IDLRL----------------------------------------NSSVQ--TRKTIRGQGPPLPGNHPLRSAPSADVGGSKLRLSYLWQHLRDGHGIDTSAVWSEIVGMILKS 391 D P TW++LWTWSKPR+E +LL Q+VNH ++ LTRKD L +H+ +++A G+ +++ F I+P TF LP+ Y SFV F++ + NI I+KP SRGRGI LVN + VI+ E VVIQ Y++ P LL+GY DLRL NSS+Q + I G P+ A D GG+K L++LW+ L G+D V I ++LK+ Sbjct: 709 DHPAGLGLKTTWNLLWTWSKPRVERQTLLVWQKVNHFQHAKALTRKDCLKKHIGKYLAAG-------------GKLRQA--------------FDIIPPTFLLPKEYVSFVQAFQERGKRLKRSGLSEAKNIWIMKPVALSRGRGISLVNDLSQVIYGEQVVIQEYIAAPKLLDGYKFDLRLYVLVTSFNPLEAFLYEEGFVRLCTRPYEDSDISNIFVHLTNSSIQKSNEEAITGSTNPIASMKGENEASQKDAGGTKTTLAFLWRRLA-AEGVDVEQVKRSIEEVVLKA 971
BLAST of NO02G02000 vs. NCBI_GenBank
Match: ETL79055.1 (hypothetical protein L917_20240, partial [Phytophthora parasitica]) HSP 1 Score: 132.5 bits (332), Expect = 2.800e-27 Identity = 93/291 (31.96%), Postives = 131/291 (45.02%), Query Frame = 0 Query: 143 DAPPSRPQDETWHMLWTWSKPRMESASLLAHQQVNHIPRSQDLTRKDFLVRHLDRHMALSSXXXXXXXGSRVCGRHQKSSSLLSYTKKSTYPFFHIMPQTFALPQAYTSFVATFRDGSSFSSSXXXXFSDNISIIKPFKASRGRGIKLVNGILDVIHSEPVVIQRYVSKPLLLNGY-IDLRL----------------------------------------NSSVQ--TRKTIRGQGPPLPGNHPLRSAPSADVGGSKLRLSYLWQHLRDGHGIDTSAVWSEIVGMILKS 391 D P TW++LWTWSKPR+E +LL Q+VNH ++ LTRKD L +H+ +++A G+ +++ F I+P TF LP+ Y SFV F++ + NI I+KP SRGRGI LVN + VI+ E VVIQ Y++ P LL+GY DLRL NSS+Q + I G P+ A D GG+K L++LW+ L G+D V I ++LK+ Sbjct: 709 DHPAGLGLKTTWNLLWTWSKPRVERQTLLVWQKVNHFQHAKALTRKDCLKKHIGKYLAAG-------------GKLRQA--------------FDIIPPTFLLPKEYVSFVQAFQERGERLKRSGLSEAKNIWIMKPVALSRGRGISLVNDLSQVIYGEQVVIQEYIAAPKLLDGYKFDLRLYVLVTSFNPLEAFLYEEGFVRLCTRPYEDSDISNIFVHLTNSSIQKSNEEAITGSTNPIASMKGENEASQKDAGGTKTTLAFLWRRLA-AEGVDVEQVKRSIEEVVLKA 971
BLAST of NO02G02000 vs. NCBI_GenBank
Match: ETM32336.1 (hypothetical protein L914_20240 [Phytophthora parasitica]) HSP 1 Score: 132.5 bits (332), Expect = 2.800e-27 Identity = 93/291 (31.96%), Postives = 131/291 (45.02%), Query Frame = 0 Query: 143 DAPPSRPQDETWHMLWTWSKPRMESASLLAHQQVNHIPRSQDLTRKDFLVRHLDRHMALSSXXXXXXXGSRVCGRHQKSSSLLSYTKKSTYPFFHIMPQTFALPQAYTSFVATFRDGSSFSSSXXXXFSDNISIIKPFKASRGRGIKLVNGILDVIHSEPVVIQRYVSKPLLLNGY-IDLRL----------------------------------------NSSVQ--TRKTIRGQGPPLPGNHPLRSAPSADVGGSKLRLSYLWQHLRDGHGIDTSAVWSEIVGMILKS 391 D P TW++LWTWSKPR+E +LL Q+VNH ++ LTRKD L +H+ +++A G+ +++ F I+P TF LP+ Y SFV F++ + NI I+KP SRGRGI LVN + VI+ E VVIQ Y++ P LL+GY DLRL NSS+Q + I G P+ A D GG+K L++LW+ L G+D V I ++LK+ Sbjct: 709 DHPAGLGLKTTWNLLWTWSKPRVERQTLLVWQKVNHFQHAKALTRKDCLKKHIGKYLAAG-------------GKLRQA--------------FDIIPPTFLLPKEYVSFVQAFQERGERLKRSGLSEAKNIWIMKPVALSRGRGISLVNDLSQVIYGEQVVIQEYIAAPKLLDGYKFDLRLYVLVTSFNPLEAFLYEEGFVRLCTRPYEDSDISNIFVHLTNSSIQKSNEEAITGSTNPIASMKGENEASQKDAGGTKTTLAFLWRRLA-AEGVDVEQVKRSIEEVVLKA 971
BLAST of NO02G02000 vs. NCBI_GenBank
Match: ETO60767.1 (hypothetical protein F444_21103 [Phytophthora parasitica P1976]) HSP 1 Score: 132.5 bits (332), Expect = 2.800e-27 Identity = 93/291 (31.96%), Postives = 131/291 (45.02%), Query Frame = 0 Query: 143 DAPPSRPQDETWHMLWTWSKPRMESASLLAHQQVNHIPRSQDLTRKDFLVRHLDRHMALSSXXXXXXXGSRVCGRHQKSSSLLSYTKKSTYPFFHIMPQTFALPQAYTSFVATFRDGSSFSSSXXXXFSDNISIIKPFKASRGRGIKLVNGILDVIHSEPVVIQRYVSKPLLLNGY-IDLRL----------------------------------------NSSVQ--TRKTIRGQGPPLPGNHPLRSAPSADVGGSKLRLSYLWQHLRDGHGIDTSAVWSEIVGMILKS 391 D P TW++LWTWSKPR+E +LL Q+VNH ++ LTRKD L +H+ +++A G+ +++ F I+P TF LP+ Y SFV F++ + NI I+KP SRGRGI LVN + VI+ E VVIQ Y++ P LL+GY DLRL NSS+Q + I G P+ A D GG+K L++LW+ L G+D V I ++LK+ Sbjct: 709 DHPAGLGLKTTWNLLWTWSKPRVERQTLLVWQKVNHFQHAKALTRKDCLKKHIGKYLAAG-------------GKLRQA--------------FDIIPPTFLLPKEYVSFVQAFQERGERLKRSGLSEAKNIWIMKPVALSRGRGISLVNDLSQVIYGEQVVIQEYIAAPKLLDGYKFDLRLYVLVTSFNPLEAFLYEEGFVRLCTRPYEDSDISNIFVHLTNSSIQKSNEEAITGSTNPIASMKGENEASQKDAGGTKTTLAFLWRRLA-AEGVDVEQVKRSIEEVVLKA 971
BLAST of NO02G02000 vs. NCBI_GenBank
Match: ETP01876.1 (hypothetical protein F441_20957 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 132.5 bits (332), Expect = 2.800e-27 Identity = 93/291 (31.96%), Postives = 131/291 (45.02%), Query Frame = 0 Query: 143 DAPPSRPQDETWHMLWTWSKPRMESASLLAHQQVNHIPRSQDLTRKDFLVRHLDRHMALSSXXXXXXXGSRVCGRHQKSSSLLSYTKKSTYPFFHIMPQTFALPQAYTSFVATFRDGSSFSSSXXXXFSDNISIIKPFKASRGRGIKLVNGILDVIHSEPVVIQRYVSKPLLLNGY-IDLRL----------------------------------------NSSVQ--TRKTIRGQGPPLPGNHPLRSAPSADVGGSKLRLSYLWQHLRDGHGIDTSAVWSEIVGMILKS 391 D P TW++LWTWSKPR+E +LL Q+VNH ++ LTRKD L +H+ +++A G+ +++ F I+P TF LP+ Y SFV F++ + NI I+KP SRGRGI LVN + VI+ E VVIQ Y++ P LL+GY DLRL NSS+Q + I G P+ A D GG+K L++LW+ L G+D V I ++LK+ Sbjct: 709 DHPAGLGLKTTWNLLWTWSKPRVERQTLLVWQKVNHFQHAKALTRKDCLKKHIGKYLAAG-------------GKLRQA--------------FDIIPPTFLLPKEYVSFVQAFQERGERLKRSGLSEAKNIWIMKPVALSRGRGISLVNDLSQVIYGEQVVIQEYIAAPKLLDGYKFDLRLYVLVTSFNPLEAFLYEEGFVRLCTRPYEDSDISNIFVHLTNSSIQKSNEEAITGSTNPIASMKGENEASQKDAGGTKTTLAFLWRRLA-AEGVDVEQVKRSIEEVVLKA 971
BLAST of NO02G02000 vs. NCBI_GenBank
Match: ETP30036.1 (hypothetical protein F442_20909 [Phytophthora parasitica P10297]) HSP 1 Score: 132.5 bits (332), Expect = 2.800e-27 Identity = 93/291 (31.96%), Postives = 131/291 (45.02%), Query Frame = 0 Query: 143 DAPPSRPQDETWHMLWTWSKPRMESASLLAHQQVNHIPRSQDLTRKDFLVRHLDRHMALSSXXXXXXXGSRVCGRHQKSSSLLSYTKKSTYPFFHIMPQTFALPQAYTSFVATFRDGSSFSSSXXXXFSDNISIIKPFKASRGRGIKLVNGILDVIHSEPVVIQRYVSKPLLLNGY-IDLRL----------------------------------------NSSVQ--TRKTIRGQGPPLPGNHPLRSAPSADVGGSKLRLSYLWQHLRDGHGIDTSAVWSEIVGMILKS 391 D P TW++LWTWSKPR+E +LL Q+VNH ++ LTRKD L +H+ +++A G+ +++ F I+P TF LP+ Y SFV F++ + NI I+KP SRGRGI LVN + VI+ E VVIQ Y++ P LL+GY DLRL NSS+Q + I G P+ A D GG+K L++LW+ L G+D V I ++LK+ Sbjct: 709 DHPAGLGLKTTWNLLWTWSKPRVERQTLLVWQKVNHFQHAKALTRKDCLKKHIGKYLAAG-------------GKLRQA--------------FDIIPPTFLLPKEYVSFVQAFQERGERLKRSGLSEAKNIWIMKPVALSRGRGISLVNDLSQVIYGEQVVIQEYIAAPKLLDGYKFDLRLYVLVTSFNPLEAFLYEEGFVRLCTRPYEDSDISNIFVHLTNSSIQKSNEEAITGSTNPIASMKGENEASQKDAGGTKTTLAFLWRRLA-AEGVDVEQVKRSIEEVVLKA 971
BLAST of NO02G02000 vs. NCBI_GenBank
Match: KUF91410.1 (Tubulin polyglutamylase TTLL5 [Phytophthora nicotianae]) HSP 1 Score: 132.5 bits (332), Expect = 2.800e-27 Identity = 93/291 (31.96%), Postives = 131/291 (45.02%), Query Frame = 0 Query: 143 DAPPSRPQDETWHMLWTWSKPRMESASLLAHQQVNHIPRSQDLTRKDFLVRHLDRHMALSSXXXXXXXGSRVCGRHQKSSSLLSYTKKSTYPFFHIMPQTFALPQAYTSFVATFRDGSSFSSSXXXXFSDNISIIKPFKASRGRGIKLVNGILDVIHSEPVVIQRYVSKPLLLNGY-IDLRL----------------------------------------NSSVQ--TRKTIRGQGPPLPGNHPLRSAPSADVGGSKLRLSYLWQHLRDGHGIDTSAVWSEIVGMILKS 391 D P TW++LWTWSKPR+E +LL Q+VNH ++ LTRKD L +H+ +++A G+ +++ F I+P TF LP+ Y SFV F++ + NI I+KP SRGRGI LVN + VI+ E VVIQ Y++ P LL+GY DLRL NSS+Q + I G P+ A D GG+K L++LW+ L G+D V I ++LK+ Sbjct: 709 DHPAGLGLKTTWNLLWTWSKPRVERQTLLVWQKVNHFQHAKALTRKDCLKKHIGKYLAAG-------------GKLRQA--------------FDIIPPTFLLPKEYVSFVQAFQERGERLKRSGLSEAKNIWIMKPVALSRGRGISLVNDLSQVIYGEQVVIQEYIAAPKLLDGYKFDLRLYVLVTSFNPLEAFLYEEGFVRLCTRPYEDSDISNIFVHLTNSSIQKSNEEAITGSTNPIASMKGENEASQKDAGGTKTTLAFLWRRLA-AEGVDVEQVKRSIEEVVLKA 971 The following BLAST results are available for this feature:
BLAST of NO02G02000 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G02000 ID=NO02G02000|Name=NO02G02000|organism=Nannochloropsis oceanica|type=gene|length=1292bpback to top protein sequence of NO02G02000.1 >NO02G02000.1-protein ID=NO02G02000.1-protein|Name=NO02G02000.1|organism=Nannochloropsis oceanica|type=polypeptide|length=391bpback to top Synonyms
Publications
|