NO02G01920, NO02G01920 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G01920 vs. NCBI_GenBank
Match: GBG29937.1 (GDP-mannose transporter [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 214.9 bits (546), Expect = 4.300e-52 Identity = 115/306 (37.58%), Postives = 181/306 (59.15%), Query Frame = 0 Query: 83 STAIMSCFAYTFCSITMVLANKALASQYKADIDFLVIAFQSVCAVALVVGCDAVGVIQPGSTKFDRAVAVQWLPVNIFFVSMLSTGFLSLKHLNVPMVTVFKNLTNVGIMWGEWYFYGAHVSLGAILSCAIMILGALLAAANDITFSGIGYIWMVSNCCCTAGYVLYMKHATKTVRLPKFGMVFYNNLLSLPILL---------VGAAVRGEFRIFIGTEDLHTMSYLSLSIYAGLVGFFLNLATLWCVSNNSATTYAVVGALNKIPLAVLGWLMFKTPITHKALVFLSMSMCGGFLYTYTKLKEV 380 S A+++C Y+ CSI M L NK + + Y ++ +Q+ +V L+ G +G++ +R+ + W+P++ FV ML T FLSL L+VPM T+FKN TN+ + G+++FYG VS + S IM+ GA++A +D+ F GY W +NCC TA YVLYM A +L FG V+YNNLLSLP+++ +G + E + + ++ + +G +GFFL+L++ CV S TTYA+VGA+NKIPLAV+G ++F+T ++ + F+ +S+ G +Y Y K +EV Sbjct: 84 SKAVLACLLYSACSIGMTLINKLILTSYGFPYHMALLLYQNAVSVLLLQGARCMGLVD--FANLNRSQIIAWIPLDFLFVGMLLTSFLSLGLLSVPMATIFKNTTNILVTAGDYFFYGREVSRPIVGSLLIMLFGAIMAGRSDLEFDPWGYFWAGANCCITAAYVLYMPRAMSDSKLNAFGRVYYNNLLSLPLIVGMDLFSSNDLGKILTTEITMMTSID----FGFVLCMVTSGCIGFFLSLSSFHCVQLTSPTTYAMVGAMNKIPLAVMGVIIFQTRLSASSTTFIFVSLIAGAMYAYAKSREV 383
BLAST of NO02G01920 vs. NCBI_GenBank
Match: GBG23893.1 (Cullin-3A [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 214.5 bits (545), Expect = 5.700e-52 Identity = 116/291 (39.86%), Postives = 185/291 (63.57%), Query Frame = 0 Query: 86 IMSCFAYTFCSITMVLANKALASQYKADIDFLVIAFQSVCAVALVVGCDAVGVIQPGSTKFDRAVAVQWLPVNIFFVSMLSTGFLSLKHLNVPMVTVFKNLTNVGIMWGEWYFYGAHVSLGAILSCAIMILGALLAAANDITFSGIGYIWMVSNCCCTAGYVLYMKHATKTVRLPKFGMVFYNNLLSLP-ILLVGAAVRGEFRIFIGTEDLH----TMSYLSLSIYAGLVGFFLNLATLWCVSNNSATTYAVVGALNKIPLAVLGWLMFKTPITHKALVFLSMSMCGGFLY 372 I SC Y+ SI+MV+ NK + S + + +++ Q++ +++L+ A+G + F+ A++W P+N FFV ML TGF SL+ L+VPM+T+FKN TN+ + G++ YG V+ G I +M+ A AAANDIT +G W + NC +AGYVLYM A K L FG V+YN+ LS+P +LL+ G+ F + +++ T+ +LS+ +++G +GF ++LA+ CV S TTY++VG++NKIPL++LG ++FKTP+T K+ VF+++S+ G LY Sbjct: 1087 ITSCLLYSVSSISMVIGNKLILSTFNFKYEMVLLLAQNLISLSLLRLARALGWYK--FEDFELRKALRWFPLNFFFVGMLLTGFYSLQLLSVPMMTIFKNSTNIIVTLGDYLMYGQTVTPGIIACLVLMVAAAAFAAANDITVDRLGISWAICNCFVSAGYVLYMPKAMKGTDLSSFGKVYYNSSLSIPLVLLLDMVAFGDIAAFTSSSEIYGAYLTIPFLSVVLFSGCIGFAISLASFNCVRQTSPTTYSMVGSMNKIPLSILGVIVFKTPLTLKSSVFVTISLLSGILY 1375
BLAST of NO02G01920 vs. NCBI_GenBank
Match: GBG23810.1 (GDP-mannose transporter [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 213.4 bits (542), Expect = 1.300e-51 Identity = 119/304 (39.14%), Postives = 180/304 (59.21%), Query Frame = 0 Query: 84 TAIMSCFAYTFCSITMVLANKALASQYKADIDFLVIAFQSVCAVALVVGCDAVGVIQPGSTKFDRAVAVQWLPVNIFFVSMLSTGFLSLKHLNVPMVTVFKNLTNVGIMWGEWYFYGAHVSLGAILSCAIMILGALLAAANDITFSGIGYIWMVSNCCCTAGYVLYMKHATKTVRLPKFGMVFYNNLLSLPI-----LLVGAAVRGEFRIFIGTEDLH-----TMSYLSLSIYAGLVGFFLNLATLWCVSNNSATTYAVVGALNKIPLAVLGWLMFKTPITHKALVFLSMSMCGGFLYTYTKLK 378 TA++SC Y+ SI M L NK + + +Q+ +V L+ +G +Q S + + +A W+P+N FV ML T F SL L+VPM T+FKN TN+ I G++ FYG VS G S +M +GA+LA +D+ F+ +GY W NC TA YVLYM A +L FG V+YNNLLSLP+ L+V + ++ F+ F + +++ + +G +GFFL+L++ CV + S TTYA+VGA+NKIPLA++G +MF T + ++++F+S+S+ G LY Y+K K Sbjct: 56 TAVLSCLIYSTFSIGMTLVNKVILTXXXXXXXXXXXXYQNAMSVLLLQFARWMGWVQFASLQTRQLIA--WIPLNFLFVGMLLTSFFSLNLLSVPMATIFKNSTNILITMGDYVFYGRRVSQGIAGSLGLMFVGAVLAGRSDLEFNTLGYFWAACNCAITAAYVLYMPRAMADSKLNAFGRVYYNNLLSLPLVMVTDLVVTSDIQSMFQSFDSSPSSEITGETDYGFIATVLVSGCIGFFLSLSSFQCVQSTSPTTYAMVGAMNKIPLAIIGIIMFNTQLNSQSVIFISISLAAGTLYAYSKSK 357
BLAST of NO02G01920 vs. NCBI_GenBank
Match: CCI40901.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 210.3 bits (534), Expect = 1.100e-50 Identity = 125/307 (40.72%), Postives = 175/307 (57.00%), Query Frame = 0 Query: 85 AIMSCFAYTFCSITMVLANKALASQ--YKADIDFLVIAFQSVCAVALVVGCDAVGVIQPGSTKFDRAVAVQWLPVNIFFVSMLSTGFLSLKHLNVPMVTVFKNLTNVGIMWGEWYFYGAHVSLGAILSCAIMILGALLAAANDI-----TFSGIGYIWMVSNCCCTAGYVLYMKHAT--KTVRLPKFGMVFYNNLLSLPILLVGAAVRGEFRIFIGTEDLHTMSYLSLSIYAGLVGFFLNLATLWCVSNNSATTYAVVGALNKIPLAVLGWLMFKTPITHKALVFLSMSMCGGFLYTYTKLKEVDLR 383 +I+SC Y+ S MVL N+ L + Y F ++A Q+ AVA++ IQ FDR +A +W PV+ FFV+ML T + L + +VTVFKN+TN+ I+ GEW +G V I S A+M+ GA+++ +DI S +GY WM+ NC CTA YVLYM+ T +R+ KFGM FYNNL+S+P+LL +GE L + + L + +G++G LNLA+ WCVS SATTYA VG LNKIP +G L+ + ++++ M GG LY Y K KE D R Sbjct: 17 SILSCIVYSLMSNVMVLTNRYLVGRQYYGFKEAFFIVAVQAAVAVAVLEIAKYRSWIQ--YDPFDRTIAKKWAPVSFFFVAMLYTSTQATAGLPIHIVTVFKNVTNIIIVSGEWQLFGEKVGWMVIASLAVMLAGAIMSCYSDIGGRTSESSILGYCWMMINCICTASYVLYMRFVTSKSNLRISKFGMAFYNNLISIPLLLPPMIFKGEAFTLWSNPLLKDLRFDYLLVLSGVLGVGLNLASFWCVSVTSATTYATVGGLNKIPTTFIGVLLLAETLRSDTAIYVTFGMIGGILYGYAKFKEADQR 321
BLAST of NO02G01920 vs. NCBI_GenBank
Match: POM62318.1 (GDP-mannose transporter [Phytophthora palmivora var. palmivora] >POM75169.1 GDP-mannose transporter [Phytophthora palmivora var. palmivora]) HSP 1 Score: 209.5 bits (532), Expect = 1.800e-50 Identity = 122/303 (40.26%), Postives = 179/303 (59.08%), Query Frame = 0 Query: 85 AIMSCFAYTFCSITMVLANKALASQ--YKADIDFLVIAFQSVCAVALVVGCDAVGVIQPGSTKFDRAVAVQWLPVNIFFVSMLSTGFLSLKHLNVPMVTVFKNLTNVGIMWGEWYFYGAHVSLGAILSCAIMILGALLAAANDI----TFSGI-GYIWMVSNCCCTAGYVLYMKHAT--KTVRLPKFGMVFYNNLLSLPILLVGAAVRGEFRIFIGTEDLHTMSYLSLSIYAGLVGFFLNLATLWCVSNNSATTYAVVGALNKIPLAVLGWLMFKTPITHKALVFLSMSMCGGFLYTYTKLKE 379 +I+SC Y+ S MVL N+ L + Y D F V+A Q+ AV ++ ++ +D +A +W PV FFV+ML TG + L + +VTVFKN+TN+ I++GEW F+G V ++S +M++GA++++ +D+ T S I GY WM NC TAGYVLYM++AT ++++ KFGM FYNNL+SLP+L + GE L +++ L +G++G LNLA+ WCVS SATTYA VG LNKIP +G L+ P+ ++++ M GG LY Y K KE Sbjct: 16 SIVSCIVYSVMSNVMVLTNRYLLGKKYYGFDEKFFVVAVQAAVAVLVLELAKMQKLV--SYDPYDSQIARKWAPVTFFFVAMLYTGMQATAGLPIHIVTVFKNVTNIIIVFGEWRFFGERVGGLVLVSLGVMLMGAVMSSYSDVGGKATVSTISGYFWMFLNCAATAGYVLYMRYATSRSSLKISKFGMAFYNNLISLPLLAPPLVLNGEAFTVWSNPLLGNINFTMLLFISGVLGVGLNLASFWCVSVTSATTYATVGGLNKIPTTFIGVLLLGEPLKSDTAIYVTFGMVGGILYGYAKFKE 316
BLAST of NO02G01920 vs. NCBI_GenBank
Match: ETI51469.1 (hypothetical protein F443_05162 [Phytophthora parasitica P1569] >ETK91365.1 hypothetical protein L915_05023 [Phytophthora parasitica] >ETL97929.1 hypothetical protein L917_04870 [Phytophthora parasitica] >ETM51092.1 hypothetical protein L914_04976 [Phytophthora parasitica] >ETO80229.1 hypothetical protein F444_05197 [Phytophthora parasitica P1976] >ETP49173.1 hypothetical protein F442_05220 [Phytophthora parasitica P10297]) HSP 1 Score: 209.1 bits (531), Expect = 2.400e-50 Identity = 125/303 (41.25%), Postives = 179/303 (59.08%), Query Frame = 0 Query: 85 AIMSCFAYTFCSITMVLANKALASQ--YKADIDFLVIAFQSVCAVALVVGCDAVGVIQPGSTKFDRAVAVQWLPVNIFFVSMLSTGFLSLKHLNVPMVTVFKNLTNVGIMWGEWYFYGAHVSLGAILSCAIMILGALLAAANDI----TFSGI-GYIWMVSNCCCTAGYVLYMKHAT--KTVRLPKFGMVFYNNLLSLPILLVGAAVRGEFRIFIGTEDLHTMSYLSLSIYAGLVGFFLNLATLWCVSNNSATTYAVVGALNKIPLAVLGWLMFKTPITHKALVFLSMSMCGGFLYTYTKLKE 379 +I+SC Y+ S MVL N+ L + Y D F V+A Q+ AV ++ +I +D AVA +W PV FFV+ML TG + L + +VTVFKN+TN+ I++GEW F+G V ++S +M++GA++++ +D+ T S I GY WM NC TAGYVLYM++AT ++++ KFGM FYNNL+SLP+L + GE L ++ L +G++G LNLA+ WCVS SATTYA VG LNKIP +G L+ P+ ++++ M GG LY Y K KE Sbjct: 15 SIVSCIVYSVMSNVMVLTNRYLLGKKYYGFDEKFFVVAVQAGVAVLVLELAKMQKLI--SYDPYDSAVARKWAPVTFFFVAMLYTGMQATAGLPIHIVTVFKNVTNIIIVFGEWRFFGERVGGLVLVSLGVMLMGAVMSSYSDVGGKATPSTISGYFWMFLNCAATAGYVLYMRYATSRSSLKISKFGMAFYNNLISLPLLAPPLVLNGEAFTVWSNPLLGNFNFTMLLFISGVLGVGLNLASFWCVSVTSATTYATVGGLNKIPTTFIGVLLLGEPLKPDTAIYVTFGMVGGILYGYAKFKE 315
BLAST of NO02G01920 vs. NCBI_GenBank
Match: ETL44773.1 (hypothetical protein L916_04972 [Phytophthora parasitica] >ETP21250.1 hypothetical protein F441_05163 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 209.1 bits (531), Expect = 2.400e-50 Identity = 125/303 (41.25%), Postives = 179/303 (59.08%), Query Frame = 0 Query: 85 AIMSCFAYTFCSITMVLANKALASQ--YKADIDFLVIAFQSVCAVALVVGCDAVGVIQPGSTKFDRAVAVQWLPVNIFFVSMLSTGFLSLKHLNVPMVTVFKNLTNVGIMWGEWYFYGAHVSLGAILSCAIMILGALLAAANDI----TFSGI-GYIWMVSNCCCTAGYVLYMKHAT--KTVRLPKFGMVFYNNLLSLPILLVGAAVRGEFRIFIGTEDLHTMSYLSLSIYAGLVGFFLNLATLWCVSNNSATTYAVVGALNKIPLAVLGWLMFKTPITHKALVFLSMSMCGGFLYTYTKLKE 379 +I+SC Y+ S MVL N+ L + Y D F V+A Q+ AV ++ +I +D AVA +W PV FFV+ML TG + L + +VTVFKN+TN+ I++GEW F+G V ++S +M++GA++++ +D+ T S I GY WM NC TAGYVLYM++AT ++++ KFGM FYNNL+SLP+L + GE L ++ L +G++G LNLA+ WCVS SATTYA VG LNKIP +G L+ P+ ++++ M GG LY Y K KE Sbjct: 15 SIVSCIVYSVMSNVMVLTNRYLLGKKYYGFDEKFFVVAVQAGVAVLVLELAKMQKLI--SYDPYDSAVARKWAPVTFFFVAMLYTGMQATAGLPIHIVTVFKNVTNIIIVFGEWRFFGERVGGLVLVSLGVMLMGAVMSSYSDVGGKATPSTISGYFWMFLNCAATAGYVLYMRYATSRSSLKISKFGMAFYNNLISLPLLAPPLVLNGEAFTVWSNPLLGNFNFTMLLFISGVLGVGLNLASFWCVSVTSATTYATVGGLNKIPTTFIGVLLLGEPLKPDTAIYVTFGMVGGILYGYAKFKE 315
BLAST of NO02G01920 vs. NCBI_GenBank
Match: XP_008902614.1 (hypothetical protein PPTG_22509 [Phytophthora parasitica INRA-310] >ETN12591.1 hypothetical protein PPTG_22509 [Phytophthora parasitica INRA-310]) HSP 1 Score: 209.1 bits (531), Expect = 2.400e-50 Identity = 125/303 (41.25%), Postives = 179/303 (59.08%), Query Frame = 0 Query: 85 AIMSCFAYTFCSITMVLANKALASQ--YKADIDFLVIAFQSVCAVALVVGCDAVGVIQPGSTKFDRAVAVQWLPVNIFFVSMLSTGFLSLKHLNVPMVTVFKNLTNVGIMWGEWYFYGAHVSLGAILSCAIMILGALLAAANDI----TFSGI-GYIWMVSNCCCTAGYVLYMKHAT--KTVRLPKFGMVFYNNLLSLPILLVGAAVRGEFRIFIGTEDLHTMSYLSLSIYAGLVGFFLNLATLWCVSNNSATTYAVVGALNKIPLAVLGWLMFKTPITHKALVFLSMSMCGGFLYTYTKLKE 379 +I+SC Y+ S MVL N+ L + Y D F V+A Q+ AV ++ +I +D AVA +W PV FFV+ML TG + L + +VTVFKN+TN+ I++GEW F+G V ++S +M++GA++++ +D+ T S I GY WM NC TAGYVLYM++AT ++++ KFGM FYNNL+SLP+L + GE L ++ L +G++G LNLA+ WCVS SATTYA VG LNKIP +G L+ P+ ++++ M GG LY Y K KE Sbjct: 151 SIVSCIVYSVMSNVMVLTNRYLLGKKYYGFDEKFFVVAVQAGVAVLVLELAKMQKLI--SYDPYDSAVARKWAPVTFFFVAMLYTGMQATAGLPIHIVTVFKNVTNIIIVFGEWRFFGERVGGLVLVSLGVMLMGAVMSSYSDVGGKATPSTISGYFWMFLNCAATAGYVLYMRYATSRSSLKISKFGMAFYNNLISLPLLAPPLVLNGEAFTVWSNPLLGNFNFTMLLFISGVLGVGLNLASFWCVSVTSATTYATVGGLNKIPTTFIGVLLLGEPLKPDTAIYVTFGMVGGILYGYAKFKE 451
BLAST of NO02G01920 vs. NCBI_GenBank
Match: KUF80758.1 (GDP-mannose transporter [Phytophthora nicotianae]) HSP 1 Score: 209.1 bits (531), Expect = 2.400e-50 Identity = 125/303 (41.25%), Postives = 179/303 (59.08%), Query Frame = 0 Query: 85 AIMSCFAYTFCSITMVLANKALASQ--YKADIDFLVIAFQSVCAVALVVGCDAVGVIQPGSTKFDRAVAVQWLPVNIFFVSMLSTGFLSLKHLNVPMVTVFKNLTNVGIMWGEWYFYGAHVSLGAILSCAIMILGALLAAANDI----TFSGI-GYIWMVSNCCCTAGYVLYMKHAT--KTVRLPKFGMVFYNNLLSLPILLVGAAVRGEFRIFIGTEDLHTMSYLSLSIYAGLVGFFLNLATLWCVSNNSATTYAVVGALNKIPLAVLGWLMFKTPITHKALVFLSMSMCGGFLYTYTKLKE 379 +I+SC Y+ S MVL N+ L + Y D F V+A Q+ AV ++ +I +D AVA +W PV FFV+ML TG + L + +VTVFKN+TN+ I++GEW F+G V ++S +M++GA++++ +D+ T S I GY WM NC TAGYVLYM++AT ++++ KFGM FYNNL+SLP+L + GE L ++ L +G++G LNLA+ WCVS SATTYA VG LNKIP +G L+ P+ ++++ M GG LY Y K KE Sbjct: 15 SIVSCIVYSVMSNVMVLTNRYLLGKKYYGFDEKFFVVAVQAGVAVLVLELAKIQKLI--SYDPYDSAVARKWAPVTFFFVAMLYTGMQATAGLPIHIVTVFKNVTNIIIVFGEWRFFGERVGGLVLVSLGVMLMGAVMSSYSDVGGKATPSTISGYFWMFLNCAATAGYVLYMRYATSRSSLKISKFGMAFYNNLISLPLLAPPLVLNGEAFTVWSNPLLGNFNFTMLLFISGVLGVGLNLASFWCVSVTSATTYATVGGLNKIPTTFIGVLLLGEPLKPDTAIYVTFGMVGGILYGYAKFKE 315
BLAST of NO02G01920 vs. NCBI_GenBank
Match: XP_014153390.1 (hypothetical protein SARC_08121 [Sphaeroforma arctica JP610] >KNC79488.1 hypothetical protein SARC_08121 [Sphaeroforma arctica JP610]) HSP 1 Score: 208.4 bits (529), Expect = 4.100e-50 Identity = 118/296 (39.86%), Postives = 176/296 (59.46%), Query Frame = 0 Query: 85 AIMSCFAYTFCSITMVLANKALASQYKAD--IDFLVIAFQSVCAVALVVGCDAVGVIQPGSTKFDRAVAVQWLPVNIFFVSMLSTGFLSLKHLNVPMVTVFKNLTNVGIMWGEWYFYGAHVSLGAILSCAIMILGALLAAANDITFSGIGYIWMVSNCCCTAGYVLYMKHATKTVRLPKFGMVFYNNLLSLPILLVGAAVRGEFRIFIGTEDLHTMSYLSLSIYAGLVGFFLNLATLWCVSNNSATTYAVVGALNKIPLAVLGWLMFKTPITHKALVFLSMSMCGGFLYTYTKLKE 379 AI S +Y+ CS+TM+ NK S Y ++ L+ A S+ AV L V G I+ FD VA +W P + F ML TG SL +L +P+VTVFKNLTN+ I +G+ +FY HVS G +L+ +M+ G++L+A DI+F+ GYIWM NC TAGY LY++ A + L ++GM FYNN+L+ + + A + GE E L+ +L +G +G L+L+ WC++ S TTY++VG+LNKIPL +L +L+F P+T + V + + G ++TY K K+ Sbjct: 15 AIASVVSYSLCSMTMIYTNKLCLSSYHFGQYVNLLLSAQCSIAAVLLYV-MKLQGYIR--LNPFDVEVAKKWFPATVLFCVMLYTGSQSLNYLTIPLVTVFKNLTNILIAYGDKHFYHQHVSTGVVLALILMLTGSILSAWTDISFNLTGYIWMALNCIGTAGYTLYIRQAKQNTNLDQWGMSFYNNVLTCCLTIPAAFLNGEVTGVQEFEYLYDPQFLLALFVSGAIGTGLSLSVFWCINETSPTTYSMVGSLNKIPLTILSFLVFAQPLTFASGVSIGFGIFSGIVFTYAKYKQ 307 The following BLAST results are available for this feature:
BLAST of NO02G01920 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G01920 ID=NO02G01920|Name=NO02G01920|organism=Nannochloropsis oceanica|type=gene|length=2031bpback to top protein sequence of NO02G01920.1 >NO02G01920.1-protein ID=NO02G01920.1-protein|Name=NO02G01920.1|organism=Nannochloropsis oceanica|type=polypeptide|length=388bpback to top Synonyms
Publications
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