NO02G01920, NO02G01920 (gene) Nannochloropsis oceanica

Overview
NameNO02G01920
Unique NameNO02G01920
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2031
Alignment locationchr2:550423..552453 +

Link to JBrowse

Properties
Property NameValue
DescriptionGdp-mannose transporter
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:550423..552453 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR000620EamA_dom
Homology
BLAST of NO02G01920 vs. NCBI_GenBank
Match: GBG29937.1 (GDP-mannose transporter [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 214.9 bits (546), Expect = 4.300e-52
Identity = 115/306 (37.58%), Postives = 181/306 (59.15%), Query Frame = 0
Query:   83 STAIMSCFAYTFCSITMVLANKALASQYKADIDFLVIAFQSVCAVALVVGCDAVGVIQPGSTKFDRAVAVQWLPVNIFFVSMLSTGFLSLKHLNVPMVTVFKNLTNVGIMWGEWYFYGAHVSLGAILSCAIMILGALLAAANDITFSGIGYIWMVSNCCCTAGYVLYMKHATKTVRLPKFGMVFYNNLLSLPILL---------VGAAVRGEFRIFIGTEDLHTMSYLSLSIYAGLVGFFLNLATLWCVSNNSATTYAVVGALNKIPLAVLGWLMFKTPITHKALVFLSMSMCGGFLYTYTKLKEV 380
            S A+++C  Y+ CSI M L NK + + Y       ++ +Q+  +V L+ G   +G++       +R+  + W+P++  FV ML T FLSL  L+VPM T+FKN TN+ +  G+++FYG  VS   + S  IM+ GA++A  +D+ F   GY W  +NCC TA YVLYM  A    +L  FG V+YNNLLSLP+++         +G  +  E  +    +      ++   + +G +GFFL+L++  CV   S TTYA+VGA+NKIPLAV+G ++F+T ++  +  F+ +S+  G +Y Y K +EV
Sbjct:   84 SKAVLACLLYSACSIGMTLINKLILTSYGFPYHMALLLYQNAVSVLLLQGARCMGLVD--FANLNRSQIIAWIPLDFLFVGMLLTSFLSLGLLSVPMATIFKNTTNILVTAGDYFFYGREVSRPIVGSLLIMLFGAIMAGRSDLEFDPWGYFWAGANCCITAAYVLYMPRAMSDSKLNAFGRVYYNNLLSLPLIVGMDLFSSNDLGKILTTEITMMTSID----FGFVLCMVTSGCIGFFLSLSSFHCVQLTSPTTYAMVGAMNKIPLAVMGVIIFQTRLSASSTTFIFVSLIAGAMYAYAKSREV 383          
BLAST of NO02G01920 vs. NCBI_GenBank
Match: GBG23893.1 (Cullin-3A [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 214.5 bits (545), Expect = 5.700e-52
Identity = 116/291 (39.86%), Postives = 185/291 (63.57%), Query Frame = 0
Query:   86 IMSCFAYTFCSITMVLANKALASQYKADIDFLVIAFQSVCAVALVVGCDAVGVIQPGSTKFDRAVAVQWLPVNIFFVSMLSTGFLSLKHLNVPMVTVFKNLTNVGIMWGEWYFYGAHVSLGAILSCAIMILGALLAAANDITFSGIGYIWMVSNCCCTAGYVLYMKHATKTVRLPKFGMVFYNNLLSLP-ILLVGAAVRGEFRIFIGTEDLH----TMSYLSLSIYAGLVGFFLNLATLWCVSNNSATTYAVVGALNKIPLAVLGWLMFKTPITHKALVFLSMSMCGGFLY 372
            I SC  Y+  SI+MV+ NK + S +    + +++  Q++ +++L+    A+G  +     F+   A++W P+N FFV ML TGF SL+ L+VPM+T+FKN TN+ +  G++  YG  V+ G I    +M+  A  AAANDIT   +G  W + NC  +AGYVLYM  A K   L  FG V+YN+ LS+P +LL+     G+   F  + +++    T+ +LS+ +++G +GF ++LA+  CV   S TTY++VG++NKIPL++LG ++FKTP+T K+ VF+++S+  G LY
Sbjct: 1087 ITSCLLYSVSSISMVIGNKLILSTFNFKYEMVLLLAQNLISLSLLRLARALGWYK--FEDFELRKALRWFPLNFFFVGMLLTGFYSLQLLSVPMMTIFKNSTNIIVTLGDYLMYGQTVTPGIIACLVLMVAAAAFAAANDITVDRLGISWAICNCFVSAGYVLYMPKAMKGTDLSSFGKVYYNSSLSIPLVLLLDMVAFGDIAAFTSSSEIYGAYLTIPFLSVVLFSGCIGFAISLASFNCVRQTSPTTYSMVGSMNKIPLSILGVIVFKTPLTLKSSVFVTISLLSGILY 1375          
BLAST of NO02G01920 vs. NCBI_GenBank
Match: GBG23810.1 (GDP-mannose transporter [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 213.4 bits (542), Expect = 1.300e-51
Identity = 119/304 (39.14%), Postives = 180/304 (59.21%), Query Frame = 0
Query:   84 TAIMSCFAYTFCSITMVLANKALASQYKADIDFLVIAFQSVCAVALVVGCDAVGVIQPGSTKFDRAVAVQWLPVNIFFVSMLSTGFLSLKHLNVPMVTVFKNLTNVGIMWGEWYFYGAHVSLGAILSCAIMILGALLAAANDITFSGIGYIWMVSNCCCTAGYVLYMKHATKTVRLPKFGMVFYNNLLSLPI-----LLVGAAVRGEFRIFIGTEDLH-----TMSYLSLSIYAGLVGFFLNLATLWCVSNNSATTYAVVGALNKIPLAVLGWLMFKTPITHKALVFLSMSMCGGFLYTYTKLK 378
            TA++SC  Y+  SI M L NK + +            +Q+  +V L+     +G +Q  S +  + +A  W+P+N  FV ML T F SL  L+VPM T+FKN TN+ I  G++ FYG  VS G   S  +M +GA+LA  +D+ F+ +GY W   NC  TA YVLYM  A    +L  FG V+YNNLLSLP+     L+V + ++  F+ F  +            +++  + +G +GFFL+L++  CV + S TTYA+VGA+NKIPLA++G +MF T +  ++++F+S+S+  G LY Y+K K
Sbjct:   56 TAVLSCLIYSTFSIGMTLVNKVILTXXXXXXXXXXXXYQNAMSVLLLQFARWMGWVQFASLQTRQLIA--WIPLNFLFVGMLLTSFFSLNLLSVPMATIFKNSTNILITMGDYVFYGRRVSQGIAGSLGLMFVGAVLAGRSDLEFNTLGYFWAACNCAITAAYVLYMPRAMADSKLNAFGRVYYNNLLSLPLVMVTDLVVTSDIQSMFQSFDSSPSSEITGETDYGFIATVLVSGCIGFFLSLSSFQCVQSTSPTTYAMVGAMNKIPLAIIGIIMFNTQLNSQSVIFISISLAAGTLYAYSKSK 357          
BLAST of NO02G01920 vs. NCBI_GenBank
Match: CCI40901.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 210.3 bits (534), Expect = 1.100e-50
Identity = 125/307 (40.72%), Postives = 175/307 (57.00%), Query Frame = 0
Query:   85 AIMSCFAYTFCSITMVLANKALASQ--YKADIDFLVIAFQSVCAVALVVGCDAVGVIQPGSTKFDRAVAVQWLPVNIFFVSMLSTGFLSLKHLNVPMVTVFKNLTNVGIMWGEWYFYGAHVSLGAILSCAIMILGALLAAANDI-----TFSGIGYIWMVSNCCCTAGYVLYMKHAT--KTVRLPKFGMVFYNNLLSLPILLVGAAVRGEFRIFIGTEDLHTMSYLSLSIYAGLVGFFLNLATLWCVSNNSATTYAVVGALNKIPLAVLGWLMFKTPITHKALVFLSMSMCGGFLYTYTKLKEVDLR 383
            +I+SC  Y+  S  MVL N+ L  +  Y     F ++A Q+  AVA++        IQ     FDR +A +W PV+ FFV+ML T   +   L + +VTVFKN+TN+ I+ GEW  +G  V    I S A+M+ GA+++  +DI       S +GY WM+ NC CTA YVLYM+  T    +R+ KFGM FYNNL+S+P+LL     +GE         L  + +  L + +G++G  LNLA+ WCVS  SATTYA VG LNKIP   +G L+    +     ++++  M GG LY Y K KE D R
Sbjct:   17 SILSCIVYSLMSNVMVLTNRYLVGRQYYGFKEAFFIVAVQAAVAVAVLEIAKYRSWIQ--YDPFDRTIAKKWAPVSFFFVAMLYTSTQATAGLPIHIVTVFKNVTNIIIVSGEWQLFGEKVGWMVIASLAVMLAGAIMSCYSDIGGRTSESSILGYCWMMINCICTASYVLYMRFVTSKSNLRISKFGMAFYNNLISIPLLLPPMIFKGEAFTLWSNPLLKDLRFDYLLVLSGVLGVGLNLASFWCVSVTSATTYATVGGLNKIPTTFIGVLLLAETLRSDTAIYVTFGMIGGILYGYAKFKEADQR 321          
BLAST of NO02G01920 vs. NCBI_GenBank
Match: POM62318.1 (GDP-mannose transporter [Phytophthora palmivora var. palmivora] >POM75169.1 GDP-mannose transporter [Phytophthora palmivora var. palmivora])

HSP 1 Score: 209.5 bits (532), Expect = 1.800e-50
Identity = 122/303 (40.26%), Postives = 179/303 (59.08%), Query Frame = 0
Query:   85 AIMSCFAYTFCSITMVLANKALASQ--YKADIDFLVIAFQSVCAVALVVGCDAVGVIQPGSTKFDRAVAVQWLPVNIFFVSMLSTGFLSLKHLNVPMVTVFKNLTNVGIMWGEWYFYGAHVSLGAILSCAIMILGALLAAANDI----TFSGI-GYIWMVSNCCCTAGYVLYMKHAT--KTVRLPKFGMVFYNNLLSLPILLVGAAVRGEFRIFIGTEDLHTMSYLSLSIYAGLVGFFLNLATLWCVSNNSATTYAVVGALNKIPLAVLGWLMFKTPITHKALVFLSMSMCGGFLYTYTKLKE 379
            +I+SC  Y+  S  MVL N+ L  +  Y  D  F V+A Q+  AV ++       ++      +D  +A +W PV  FFV+ML TG  +   L + +VTVFKN+TN+ I++GEW F+G  V    ++S  +M++GA++++ +D+    T S I GY WM  NC  TAGYVLYM++AT   ++++ KFGM FYNNL+SLP+L     + GE         L  +++  L   +G++G  LNLA+ WCVS  SATTYA VG LNKIP   +G L+   P+     ++++  M GG LY Y K KE
Sbjct:   16 SIVSCIVYSVMSNVMVLTNRYLLGKKYYGFDEKFFVVAVQAAVAVLVLELAKMQKLV--SYDPYDSQIARKWAPVTFFFVAMLYTGMQATAGLPIHIVTVFKNVTNIIIVFGEWRFFGERVGGLVLVSLGVMLMGAVMSSYSDVGGKATVSTISGYFWMFLNCAATAGYVLYMRYATSRSSLKISKFGMAFYNNLISLPLLAPPLVLNGEAFTVWSNPLLGNINFTMLLFISGVLGVGLNLASFWCVSVTSATTYATVGGLNKIPTTFIGVLLLGEPLKSDTAIYVTFGMVGGILYGYAKFKE 316          
BLAST of NO02G01920 vs. NCBI_GenBank
Match: ETI51469.1 (hypothetical protein F443_05162 [Phytophthora parasitica P1569] >ETK91365.1 hypothetical protein L915_05023 [Phytophthora parasitica] >ETL97929.1 hypothetical protein L917_04870 [Phytophthora parasitica] >ETM51092.1 hypothetical protein L914_04976 [Phytophthora parasitica] >ETO80229.1 hypothetical protein F444_05197 [Phytophthora parasitica P1976] >ETP49173.1 hypothetical protein F442_05220 [Phytophthora parasitica P10297])

HSP 1 Score: 209.1 bits (531), Expect = 2.400e-50
Identity = 125/303 (41.25%), Postives = 179/303 (59.08%), Query Frame = 0
Query:   85 AIMSCFAYTFCSITMVLANKALASQ--YKADIDFLVIAFQSVCAVALVVGCDAVGVIQPGSTKFDRAVAVQWLPVNIFFVSMLSTGFLSLKHLNVPMVTVFKNLTNVGIMWGEWYFYGAHVSLGAILSCAIMILGALLAAANDI----TFSGI-GYIWMVSNCCCTAGYVLYMKHAT--KTVRLPKFGMVFYNNLLSLPILLVGAAVRGEFRIFIGTEDLHTMSYLSLSIYAGLVGFFLNLATLWCVSNNSATTYAVVGALNKIPLAVLGWLMFKTPITHKALVFLSMSMCGGFLYTYTKLKE 379
            +I+SC  Y+  S  MVL N+ L  +  Y  D  F V+A Q+  AV ++       +I      +D AVA +W PV  FFV+ML TG  +   L + +VTVFKN+TN+ I++GEW F+G  V    ++S  +M++GA++++ +D+    T S I GY WM  NC  TAGYVLYM++AT   ++++ KFGM FYNNL+SLP+L     + GE         L   ++  L   +G++G  LNLA+ WCVS  SATTYA VG LNKIP   +G L+   P+     ++++  M GG LY Y K KE
Sbjct:   15 SIVSCIVYSVMSNVMVLTNRYLLGKKYYGFDEKFFVVAVQAGVAVLVLELAKMQKLI--SYDPYDSAVARKWAPVTFFFVAMLYTGMQATAGLPIHIVTVFKNVTNIIIVFGEWRFFGERVGGLVLVSLGVMLMGAVMSSYSDVGGKATPSTISGYFWMFLNCAATAGYVLYMRYATSRSSLKISKFGMAFYNNLISLPLLAPPLVLNGEAFTVWSNPLLGNFNFTMLLFISGVLGVGLNLASFWCVSVTSATTYATVGGLNKIPTTFIGVLLLGEPLKPDTAIYVTFGMVGGILYGYAKFKE 315          
BLAST of NO02G01920 vs. NCBI_GenBank
Match: ETL44773.1 (hypothetical protein L916_04972 [Phytophthora parasitica] >ETP21250.1 hypothetical protein F441_05163 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 209.1 bits (531), Expect = 2.400e-50
Identity = 125/303 (41.25%), Postives = 179/303 (59.08%), Query Frame = 0
Query:   85 AIMSCFAYTFCSITMVLANKALASQ--YKADIDFLVIAFQSVCAVALVVGCDAVGVIQPGSTKFDRAVAVQWLPVNIFFVSMLSTGFLSLKHLNVPMVTVFKNLTNVGIMWGEWYFYGAHVSLGAILSCAIMILGALLAAANDI----TFSGI-GYIWMVSNCCCTAGYVLYMKHAT--KTVRLPKFGMVFYNNLLSLPILLVGAAVRGEFRIFIGTEDLHTMSYLSLSIYAGLVGFFLNLATLWCVSNNSATTYAVVGALNKIPLAVLGWLMFKTPITHKALVFLSMSMCGGFLYTYTKLKE 379
            +I+SC  Y+  S  MVL N+ L  +  Y  D  F V+A Q+  AV ++       +I      +D AVA +W PV  FFV+ML TG  +   L + +VTVFKN+TN+ I++GEW F+G  V    ++S  +M++GA++++ +D+    T S I GY WM  NC  TAGYVLYM++AT   ++++ KFGM FYNNL+SLP+L     + GE         L   ++  L   +G++G  LNLA+ WCVS  SATTYA VG LNKIP   +G L+   P+     ++++  M GG LY Y K KE
Sbjct:   15 SIVSCIVYSVMSNVMVLTNRYLLGKKYYGFDEKFFVVAVQAGVAVLVLELAKMQKLI--SYDPYDSAVARKWAPVTFFFVAMLYTGMQATAGLPIHIVTVFKNVTNIIIVFGEWRFFGERVGGLVLVSLGVMLMGAVMSSYSDVGGKATPSTISGYFWMFLNCAATAGYVLYMRYATSRSSLKISKFGMAFYNNLISLPLLAPPLVLNGEAFTVWSNPLLGNFNFTMLLFISGVLGVGLNLASFWCVSVTSATTYATVGGLNKIPTTFIGVLLLGEPLKPDTAIYVTFGMVGGILYGYAKFKE 315          
BLAST of NO02G01920 vs. NCBI_GenBank
Match: XP_008902614.1 (hypothetical protein PPTG_22509 [Phytophthora parasitica INRA-310] >ETN12591.1 hypothetical protein PPTG_22509 [Phytophthora parasitica INRA-310])

HSP 1 Score: 209.1 bits (531), Expect = 2.400e-50
Identity = 125/303 (41.25%), Postives = 179/303 (59.08%), Query Frame = 0
Query:   85 AIMSCFAYTFCSITMVLANKALASQ--YKADIDFLVIAFQSVCAVALVVGCDAVGVIQPGSTKFDRAVAVQWLPVNIFFVSMLSTGFLSLKHLNVPMVTVFKNLTNVGIMWGEWYFYGAHVSLGAILSCAIMILGALLAAANDI----TFSGI-GYIWMVSNCCCTAGYVLYMKHAT--KTVRLPKFGMVFYNNLLSLPILLVGAAVRGEFRIFIGTEDLHTMSYLSLSIYAGLVGFFLNLATLWCVSNNSATTYAVVGALNKIPLAVLGWLMFKTPITHKALVFLSMSMCGGFLYTYTKLKE 379
            +I+SC  Y+  S  MVL N+ L  +  Y  D  F V+A Q+  AV ++       +I      +D AVA +W PV  FFV+ML TG  +   L + +VTVFKN+TN+ I++GEW F+G  V    ++S  +M++GA++++ +D+    T S I GY WM  NC  TAGYVLYM++AT   ++++ KFGM FYNNL+SLP+L     + GE         L   ++  L   +G++G  LNLA+ WCVS  SATTYA VG LNKIP   +G L+   P+     ++++  M GG LY Y K KE
Sbjct:  151 SIVSCIVYSVMSNVMVLTNRYLLGKKYYGFDEKFFVVAVQAGVAVLVLELAKMQKLI--SYDPYDSAVARKWAPVTFFFVAMLYTGMQATAGLPIHIVTVFKNVTNIIIVFGEWRFFGERVGGLVLVSLGVMLMGAVMSSYSDVGGKATPSTISGYFWMFLNCAATAGYVLYMRYATSRSSLKISKFGMAFYNNLISLPLLAPPLVLNGEAFTVWSNPLLGNFNFTMLLFISGVLGVGLNLASFWCVSVTSATTYATVGGLNKIPTTFIGVLLLGEPLKPDTAIYVTFGMVGGILYGYAKFKE 451          
BLAST of NO02G01920 vs. NCBI_GenBank
Match: KUF80758.1 (GDP-mannose transporter [Phytophthora nicotianae])

HSP 1 Score: 209.1 bits (531), Expect = 2.400e-50
Identity = 125/303 (41.25%), Postives = 179/303 (59.08%), Query Frame = 0
Query:   85 AIMSCFAYTFCSITMVLANKALASQ--YKADIDFLVIAFQSVCAVALVVGCDAVGVIQPGSTKFDRAVAVQWLPVNIFFVSMLSTGFLSLKHLNVPMVTVFKNLTNVGIMWGEWYFYGAHVSLGAILSCAIMILGALLAAANDI----TFSGI-GYIWMVSNCCCTAGYVLYMKHAT--KTVRLPKFGMVFYNNLLSLPILLVGAAVRGEFRIFIGTEDLHTMSYLSLSIYAGLVGFFLNLATLWCVSNNSATTYAVVGALNKIPLAVLGWLMFKTPITHKALVFLSMSMCGGFLYTYTKLKE 379
            +I+SC  Y+  S  MVL N+ L  +  Y  D  F V+A Q+  AV ++       +I      +D AVA +W PV  FFV+ML TG  +   L + +VTVFKN+TN+ I++GEW F+G  V    ++S  +M++GA++++ +D+    T S I GY WM  NC  TAGYVLYM++AT   ++++ KFGM FYNNL+SLP+L     + GE         L   ++  L   +G++G  LNLA+ WCVS  SATTYA VG LNKIP   +G L+   P+     ++++  M GG LY Y K KE
Sbjct:   15 SIVSCIVYSVMSNVMVLTNRYLLGKKYYGFDEKFFVVAVQAGVAVLVLELAKIQKLI--SYDPYDSAVARKWAPVTFFFVAMLYTGMQATAGLPIHIVTVFKNVTNIIIVFGEWRFFGERVGGLVLVSLGVMLMGAVMSSYSDVGGKATPSTISGYFWMFLNCAATAGYVLYMRYATSRSSLKISKFGMAFYNNLISLPLLAPPLVLNGEAFTVWSNPLLGNFNFTMLLFISGVLGVGLNLASFWCVSVTSATTYATVGGLNKIPTTFIGVLLLGEPLKPDTAIYVTFGMVGGILYGYAKFKE 315          
BLAST of NO02G01920 vs. NCBI_GenBank
Match: XP_014153390.1 (hypothetical protein SARC_08121 [Sphaeroforma arctica JP610] >KNC79488.1 hypothetical protein SARC_08121 [Sphaeroforma arctica JP610])

HSP 1 Score: 208.4 bits (529), Expect = 4.100e-50
Identity = 118/296 (39.86%), Postives = 176/296 (59.46%), Query Frame = 0
Query:   85 AIMSCFAYTFCSITMVLANKALASQYKAD--IDFLVIAFQSVCAVALVVGCDAVGVIQPGSTKFDRAVAVQWLPVNIFFVSMLSTGFLSLKHLNVPMVTVFKNLTNVGIMWGEWYFYGAHVSLGAILSCAIMILGALLAAANDITFSGIGYIWMVSNCCCTAGYVLYMKHATKTVRLPKFGMVFYNNLLSLPILLVGAAVRGEFRIFIGTEDLHTMSYLSLSIYAGLVGFFLNLATLWCVSNNSATTYAVVGALNKIPLAVLGWLMFKTPITHKALVFLSMSMCGGFLYTYTKLKE 379
            AI S  +Y+ CS+TM+  NK   S Y     ++ L+ A  S+ AV L V     G I+     FD  VA +W P  + F  ML TG  SL +L +P+VTVFKNLTN+ I +G+ +FY  HVS G +L+  +M+ G++L+A  DI+F+  GYIWM  NC  TAGY LY++ A +   L ++GM FYNN+L+  + +  A + GE       E L+   +L     +G +G  L+L+  WC++  S TTY++VG+LNKIPL +L +L+F  P+T  + V +   +  G ++TY K K+
Sbjct:   15 AIASVVSYSLCSMTMIYTNKLCLSSYHFGQYVNLLLSAQCSIAAVLLYV-MKLQGYIR--LNPFDVEVAKKWFPATVLFCVMLYTGSQSLNYLTIPLVTVFKNLTNILIAYGDKHFYHQHVSTGVVLALILMLTGSILSAWTDISFNLTGYIWMALNCIGTAGYTLYIRQAKQNTNLDQWGMSFYNNVLTCCLTIPAAFLNGEVTGVQEFEYLYDPQFLLALFVSGAIGTGLSLSVFWCINETSPTTYSMVGSLNKIPLTILSFLVFAQPLTFASGVSIGFGIFSGIVFTYAKYKQ 307          
The following BLAST results are available for this feature:
BLAST of NO02G01920 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
GBG29937.14.300e-5237.58GDP-mannose transporter [Aurantiochytrium sp. FCC1... [more]
GBG23893.15.700e-5239.86Cullin-3A [Aurantiochytrium sp. FCC1311][more]
GBG23810.11.300e-5139.14GDP-mannose transporter [Aurantiochytrium sp. FCC1... [more]
CCI40901.11.100e-5040.72unnamed protein product [Albugo candida][more]
POM62318.11.800e-5040.26GDP-mannose transporter [Phytophthora palmivora va... [more]
ETI51469.12.400e-5041.25hypothetical protein F443_05162 [Phytophthora para... [more]
ETL44773.12.400e-5041.25hypothetical protein L916_04972 [Phytophthora para... [more]
XP_008902614.12.400e-5041.25hypothetical protein PPTG_22509 [Phytophthora para... [more]
KUF80758.12.400e-5041.25GDP-mannose transporter [Phytophthora nicotianae][more]
XP_014153390.14.100e-5039.86hypothetical protein SARC_08121 [Sphaeroforma arct... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL020nonsL020Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR005ngnoR005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR002ngnoR002Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006852NSK006852Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G01920.1NO02G01920.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|574093gene_776Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100100g9gene220Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G01920.1NO02G01920.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G01920 ID=NO02G01920|Name=NO02G01920|organism=Nannochloropsis oceanica|type=gene|length=2031bp
GTCGGCATGGTACTTGGCCTTGCATCCCTGGACAAATCCAGCCATCGTTC
CCATTACTACACAAACCATTCCAGCTGTGGAAAAAGGAATGAGTTGGGGA
CCGTGGCACCCCGGATTAAAAATCGCTTTCTTACAAGCTCCTTGCGGCGA
TGGCGATGATCGTCACGATGTGATCGTGCAGCCGTGCCTGAAGAGCTGAA
CACACCCCTATTCCACTCTTCCCTTCCCGCACTTTCATGATCATTTGCGC
CAATACATAAAGCGCAGCCACGTGAGGATGAGAAATCGTTGACACTGCTT
AGCCAGCGCTAGACCCTGCTTGCTGTTTTAGGTCACTCTTCTAGTGTAGT
CCTCTCCGCTCCATTTACCACCCGCCGTTTCTCTCACAGAACCCAACCCA
CACTATACACAGTACTCACAACAACAGTAATCACGACCACCCGGGGACGA
AGGACGATATTCATGTCCTTGAAGGGCATTGGGGGCAGGGGCGGAAACTT
CTATGAAGGTCGGGATGGCACCGTCGCCGACGATGAGGAAATTAATCCCC
TAATGGTGGAGATGCGCCAAGCCAAGGGTCGGCTTGAAGGCAGCTCATCT
TTGTCCTCGACCACTCCATCGTCATCCTCCTCATCTCGTTCCTCCTCTTC
TGGGTCAGTCGCCACGTCCTACGCCGCGACAACCGTGACGAGCCTAGGCG
ACCCGGCCTCGACCGCCATCATGTCATGCTTCGCCTACACCTTTTGCTCC
ATCACAATGGTCCTGGCCAACAAGGCCCTCGCCTCGCAATACAAAGCTGA
CATTGATTTTCTCGTTATTGCCTTTCAAAGCGTTTGTGCCGTCGCCCTCG
TGGTGGGCTGCGATGCGGTCGGAGTCATTCAACCGGGCAGCACCAAATTC
GATCGCGCCGTGGCTGTTCAATGGCTCCCTGTCAACATCTTCTTCGTCAG
CATGCTTTCCACGGGCTTTCTCAGTCTCAAACACCTCAATGTGCCCATGG
TCACCGTCTTTAAGAACCTGACCAACGTGGGCATCATGTGGGGGGAGTGG
TATTTCTACGGGGCACACGTCTCCCTCGGTGCCATCTTATCTTGTGCCAT
CATGATCTTAGGCGCCCTCCTCGCCGCTGCCAACGACATCACGTTCTCCG
GCATAGGTTATATTTGGATGGTCTCCAATTGCTGTTGCACTGCCGGGTAC
GTTTTGTACATGAAGCATGCCACTAAAACGGTGCGTCTGCCCAAATTTGG
TATGGTCTTCTACAACAACCTCTTGTCATTGCCGATCCTGTTGGTAGGAG
CGGCGGTCCGAGGGGAATTTAGGATTTTTATTGGGACAGAAGACTTACAC
ACGATGTCATATTTGAGCTTGTCGATATATGCAGGATTGGTAGGCTTTTT
CCTGAACTTGGCGACGTTATGGTGTGTGAGTAATAATTCAGCCACGACCT
ATGCAGTGGTGGGAGCACTGAACAAAATACCCTTGGCGGTGTTGGGATGG
CTAATGTTTAAAACACCCATAACGCACAAAGCGTTGGTGTTTTTGTCCAT
GAGCATGTGTGGGGGCTTTTTGTATACCTACACTAAATTGAAGGAGGTGG
ATCTGCGACCAACTTTGCCGAGATGAGGGGTAGGGAGGAAGGGCAGGGAA
AATGTGGACATATTATCAGTTGGATTTAAAATAGAATGGTAAATAAAGAG
CAGAAATGTACGACAGCTGTTTGAAAGGTAGGTAGGCACTGTGTCGAGTT
TTGAACGAATGCGCGACAGTCTCTTTCCTGGTTCACTTTCAGCAGCTGTA
GTAGAAGCAGCAGCAGTAATAAAATCTGTGGATTAGCGCTAATAGGAATA
AAAACATCAAACGAAAGATTTTCCCTGTTGGGTGAAAAGAGAGTCTTTTG
CTGTCGCTGCCTCTGCAGAATTTCATGATTGCAGAAGTCGGAAATAAGAA
GATGATCAGCGGATACGCGAAGGAACAAGTAAAAAGAGAAAGAGGAAGAC
GAAAGAAAATTGAGATGGCTGGTGATGATGA
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protein sequence of NO02G01920.1

>NO02G01920.1-protein ID=NO02G01920.1-protein|Name=NO02G01920.1|organism=Nannochloropsis oceanica|type=polypeptide|length=388bp
MSLKGIGGRGGNFYEGRDGTVADDEEINPLMVEMRQAKGRLEGSSSLSST
TPSSSSSSRSSSSGSVATSYAATTVTSLGDPASTAIMSCFAYTFCSITMV
LANKALASQYKADIDFLVIAFQSVCAVALVVGCDAVGVIQPGSTKFDRAV
AVQWLPVNIFFVSMLSTGFLSLKHLNVPMVTVFKNLTNVGIMWGEWYFYG
AHVSLGAILSCAIMILGALLAAANDITFSGIGYIWMVSNCCCTAGYVLYM
KHATKTVRLPKFGMVFYNNLLSLPILLVGAAVRGEFRIFIGTEDLHTMSY
LSLSIYAGLVGFFLNLATLWCVSNNSATTYAVVGALNKIPLAVLGWLMFK
TPITHKALVFLSMSMCGGFLYTYTKLKEVDLRPTLPR*
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Synonyms
Publications