NO02G01850, NO02G01850 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G01850 vs. NCBI_GenBank
Match: OEU21961.1 (hypothetical protein FRACYDRAFT_223215 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 143.3 bits (360), Expect = 9.800e-31 Identity = 91/201 (45.27%), Postives = 120/201 (59.70%), Query Frame = 0 Query: 41 GKKKRHRNVRDGYRGATE---DLSLFYGMDQAAMTTVTPEARLLPQELYEQVVRLLPILCVDLAIERPSD---GKFLLVKRGSEPAKGFYWPPGGRIFRGETFFAAAVRKAREETGV-EAFPLGVLGVYNTFFPTSNWG--SGMGTHTVNICVHMRLVGGGKEGEGEVQLDETSEEHVWVH----PREKCHHDPYVQEILM 229 GKK R GATE DLSLFYG + +TT+T + LP +LY ++VR + CVD+ + R + + LLVKR SEPAKG +W PGGR+ +GETFF AA RKA++ETG+ + + VLG++NTFFPTSNW + GT TVN V + L G +V LD+TSEE W+ EK D YV + L+ Sbjct: 38 GKKNRKN------AGATEEGNDLSLFYG-EVDELTTITDSRKFLPSDLYGKLVRDCVVFCVDIVLVRTNSENKKECLLVKRSSEPAKGLWWWPGGRMLKGETFFDAAKRKAKQETGLGDVTCMQVLGIWNTFFPTSNWDTETEKGTQTVNAIVLVELNNTG----ADVNLDDTSEESKWISLNPAEAEKNGEDKYVLQGLL 227
BLAST of NO02G01850 vs. NCBI_GenBank
Match: XP_002180031.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC48222.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 139.4 bits (350), Expect = 1.400e-29 Identity = 78/167 (46.71%), Postives = 107/167 (64.07%), Query Frame = 0 Query: 52 GYRGATEDLSLFYGMDQAAMTTVTPEARLLPQELYEQVVRLLPILCVDLAIERPSDGK----FLLVKRGSEPAKGFYWPPGGRIFRGETFFAAAVRKAREETGV-EAFPLGVLGVYNTFFPTSNW--GSGMGTHTVNICVHMRLVGGGKEGEGEVQLDETSEEHVWV 212 G G DLSLFYG ++ +T +T + LP+E+Y +VR + CVD+ + R ++ + LLV+R +EPAKG +W PGGR+ +GETFF AA RKA +ETG+ P+ +LGV+NTFFPTS W S GT TVN V + L G G+V+LDETSE + W+ Sbjct: 38 GATGEGNDLSLFYG-NEKELTNITEARKFLPKEIYGHLVRDTVVCCVDIVLVRHNEERSCKECLLVERSTEPAKGLWWWPGGRLLKGETFFDAARRKAFQETGLTNVTPIQILGVWNTFFPTSAWDTDSSKGTQTVNPIVLVELNDVG----GDVKLDETSENYKWI 199
BLAST of NO02G01850 vs. NCBI_GenBank
Match: GAX09775.1 (colanic acid biosynthesis protein WcaH [Fistulifera solaris]) HSP 1 Score: 138.3 bits (347), Expect = 3.100e-29 Identity = 83/193 (43.01%), Postives = 116/193 (60.10%), Query Frame = 0 Query: 44 KRHRNVRDGYRGATEDLSLFYGMDQAAMTTVTPEARLLPQELYEQVVRLLPILCVDLAIERPSDGK--FLLVKRGSEPAKGFYWPPGGRIFRGETFFAAAVRKAREETGV-EAFPLGVLGVYNTFFPTSNWGS--GMGTHTVNICVHMRLVGGGKEGEGEVQLDETSEEHVWV----HPREKCHHDPYVQEIL 228 KR +N G DLSLFYG D+ +TT+T + LP ++Y +VR + CVD+ + R + G+ L+V+R SEPAKG +W PGGR+ +GETFFAAA RKA +ETG+ P+ VLGV+NTFFP S+W + GT TVN V + ++ E +++LD+ SE + W+ E D YV E L Sbjct: 32 KRRKNAGATVEG--NDLSLFYG-DENELTTITDRRKFLPADVYGNLVRDTVVCCVDILLVRYNAGRKETLVVERSSEPAKGLWWLPGGRLLKGETFFAAAQRKAFQETGLSNVKPIQVLGVWNTFFPRSSWDTEESKGTQTVNPIVLVEIL----EDATDIKLDDQSENYRWIGLDPKAAEAAGEDRYVLEAL 217
BLAST of NO02G01850 vs. NCBI_GenBank
Match: GAX14710.1 (colanic acid biosynthesis protein WcaH [Fistulifera solaris]) HSP 1 Score: 137.9 bits (346), Expect = 4.100e-29 Identity = 82/193 (42.49%), Postives = 116/193 (60.10%), Query Frame = 0 Query: 44 KRHRNVRDGYRGATEDLSLFYGMDQAAMTTVTPEARLLPQELYEQVVRLLPILCVDLAIERPSDGK--FLLVKRGSEPAKGFYWPPGGRIFRGETFFAAAVRKAREETGV-EAFPLGVLGVYNTFFPTSNWGS--GMGTHTVNICVHMRLVGGGKEGEGEVQLDETSEEHVWV----HPREKCHHDPYVQEIL 228 KR +N G DLSL+YG D+ +TT+T + LP ++Y +VR + CVD+ + R + G+ L+V+R SEPAKG +W PGGR+ +GETFFAAA RKA +ETG+ P+ VLGV+NTFFP S+W + GT TVN V + ++ E +++LD+ SE + W+ E D YV E L Sbjct: 32 KRRKNAGATVEG--NDLSLYYG-DEKELTTITDRRKFLPSDVYGNLVRDTVVCCVDILLVRYNAGRKETLVVERSSEPAKGLWWLPGGRLLKGETFFAAAQRKAFQETGLSNVKPIQVLGVWNTFFPRSSWDTEESKGTQTVNPIVLVEIL----EDATDIKLDDQSENYRWIGLDPKAAEAAGEDRYVLEAL 217
BLAST of NO02G01850 vs. NCBI_GenBank
Match: GAX72957.1 (hypothetical protein CEUSTIGMA_g412.t1 [Chlamydomonas eustigma]) HSP 1 Score: 113.2 bits (282), Expect = 1.100e-21 Identity = 58/117 (49.57%), Postives = 75/117 (64.10%), Query Frame = 0 Query: 77 EARLLPQELYEQVVRLLPILCVDLAIERPSDGKFLLVKRGSEPAKGFYWPPGGRIFRGETFFAAAVRKAREETG----VEAFPLGVLGVYNTFFPTSNWGSG-----MGTHTVNICV 185 E + LP E Y+ V LPI+CVD+ ++RPSDGK LL R +PA +W PGGR+FRGETF A+RK R+ETG V A G++ V+NTFFP S+W G GT TVN+ + Sbjct: 73 EYKRLPMEFYKFAVEHLPIVCVDVVLQRPSDGKVLLFYRKDKPAAKIWWWPGGRMFRGETFEDTALRKIRDETGAGDTVNATAEGIIQVWNTFFPDSSWDQGRRPEQYGTQTVNVTI 189
BLAST of NO02G01850 vs. NCBI_GenBank
Match: KKU89515.1 (hypothetical protein UY21_C0033G0005 [Microgenomates group bacterium GW2011_GWA1_48_10]) HSP 1 Score: 105.5 bits (262), Expect = 2.300e-19 Identity = 58/150 (38.67%), Postives = 89/150 (59.33%), Query Frame = 0 Query: 78 ARLLPQELYEQVVRLLPILCVDLAIERPSDGKFLLVKRGSEPAKGFYWPPGGRIFRGETFFAAAVRKAREETGVEAFPLGVLGVYNTFFPTSNWGSGMGTHTVNICVHMRLVGGGKEGEGEVQLDETSEEHVWVHPREKCHHDPYVQEIL 228 +R +P LY+++ R+LP++CVDL + S FLL+KR +EP G +W PGGRIF+ E A +RK REE G+ + +LGV+ +F + + G +HTV I + LV E + EV+LD+ S E W + + DPY+++ L Sbjct: 5 SRPIPSSLYKKIHRVLPLVCVDLVVRDRSRKSFLLIKRANEPEIGKWWFPGGRIFKNEMLKTAVLRKLREEVGLRGRVIKILGVHE-YFSRTGYFQGTNSHTVPIVFLVDLV----EDKTEVRLDDQSAEFGW-FKNIRSNWDPYLKKFL 148
BLAST of NO02G01850 vs. NCBI_GenBank
Match: WP_012630546.1 (NUDIX hydrolase [Cyanothece sp. PCC 7425] >ACL47518.1 NUDIX hydrolase [Cyanothece sp. PCC 7425]) HSP 1 Score: 98.2 bits (243), Expect = 3.600e-17 Identity = 59/151 (39.07%), Postives = 90/151 (59.60%), Query Frame = 0 Query: 79 RLLPQELYEQVVRLLPILCVDLAIERPSDGKFLLVKRGSEPAKGFYWPPGGRIFRGETFFAAAVRKAREETGVEAFPLGVLGVYNTFFPTSNWGSGMGTHTVNICVHMRLVGGGKEGEGEVQLDETSEEHVWVHPREKCHHDPYVQEILMA 230 +L+P LYEQ++ LPI CVD+AIE + K LL+KR + PA+G +W PGGR+ +GET AAA+RKA+ ETG+E + ++ T F ++ G+ HT+NIC + + + + LD + ++ W H PY++E LMA Sbjct: 2 QLIPDSLYEQILACLPIACVDIAIE--FEHKILLLKRKNPPAQGQWWLPGGRVQKGETLEAAALRKAQAETGLECCLVKMIYTGETIF--TDGPMGIPVHTINIC----FLAHPRNLDVQPVLDRSHVDYQWCSQLIPDLH-PYMRECLMA 143
BLAST of NO02G01850 vs. NCBI_GenBank
Match: KMQ51539.1 (GDP-mannose mannosyl hydrolase [Chitinispirillum alkaliphilum]) HSP 1 Score: 98.2 bits (243), Expect = 3.600e-17 Identity = 56/149 (37.58%), Postives = 83/149 (55.70%), Query Frame = 0 Query: 81 LPQELYEQVVRLLPILCVDLAIERPSDGKFLLVKRGSEPAKGFYWPPGGRIFRGETFFAAAVRKAREETGVEAFPLGVLGVYNTFFPTSNWGSGMGTHTVNICVHMRLVGGGKEGEGEVQLDETSEEHVWVHPREKCHHDPYVQEILMA 230 +PQ+LY +++ +PI CVD+AI ++G LLVKR PAK +W PGGR+ +GE A+RKAREE G+E ++ T FP + + H++N C + V E LD+ E++ WV+ + +H YVQ LMA Sbjct: 13 IPQKLYNEIIGNVPIACVDIAI--IANGSVLLVKRKDPPAKDMWWLPGGRVLKGEMMKETALRKAREEVGIECHAGPIIYTAETIFPDGPY--DIPIHSINSCFFLYPV----SAEQIPSLDDHHEDYRWVNCIDNSYHQ-YVQRCLMA 152
BLAST of NO02G01850 vs. NCBI_GenBank
Match: OIP75829.1 (hypothetical protein AUK07_00850 [Parcubacteria group bacterium CG2_30_36_21]) HSP 1 Score: 98.2 bits (243), Expect = 3.600e-17 Identity = 56/147 (38.10%), Postives = 88/147 (59.86%), Query Frame = 0 Query: 81 LPQELYEQVVRLLPILCVDLAIERPSDGKFLLVKRGSEPAKGFYWPPGGRIFRGETFFAAAVRKAREETGVEAFPLGVLGVYNTFFPTSNWGSGMGTHTVNICVHMRLVGGGKEGEGEVQLDETSEEHVWVHPREKCHHDPYVQEIL 228 +PQ+LY+++ L+PI CVD+ I++ KFLLVKR ++PAKG ++ GGRI +GE AA RK +EETG++ ++GV T F + +G+ HT+NI + +G+ EV LD S ++ W + H PY+++ L Sbjct: 3 IPQKLYKKIQELVPIACVDIIIKKGE--KFLLVKRKNKPAKGQWFFVGGRIMKGELLEEAAFRKVKEETGLDIILKKIIGVDQTIFKKGPFDNGV--HTINIVFLAEV-----KGKDEVNLDSQSVDYKWFRQIDNNWH-PYIRKFL 139
BLAST of NO02G01850 vs. NCBI_GenBank
Match: OGV46875.1 (NUDIX hydrolase [Lentisphaerae bacterium GWF2_57_35]) HSP 1 Score: 97.8 bits (242), Expect = 4.700e-17 Identity = 57/148 (38.51%), Postives = 78/148 (52.70%), Query Frame = 0 Query: 81 LPQELYEQVVRLLPILCVDLAIERPSDGKFLLVKRGSEPAKGFYWPPGGRIFRGETFFAAAVRKAREETGVEAFPLGVLGVYNTFFPTSNWGSGMGTHTVNICVHMRLVGGGKEGEGEVQLDETSEEHVWVHPREKCHHDPYVQEILM 229 +PQ+LY Q++ +PI CVD+AI S G LLV+R PA+G W PGGR+ +GE AVRKAR+E G+E ++ T FP W G+ H++N C M + +LD E VW+ + H YVQ LM Sbjct: 8 IPQDLYNQILEHVPIACVDIAI--VSHGSVLLVRRKDPPAQGHLWVPGGRVLKGEMMKETAVRKARDEVGIECHVGPIIHTAETIFPDGPW--GIPVHSINCCFFMY----PADKNFVPKLDHHQSECVWIDRIPQGLHS-YVQRCLM 146 The following BLAST results are available for this feature:
BLAST of NO02G01850 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G01850 ID=NO02G01850|Name=NO02G01850|organism=Nannochloropsis oceanica|type=gene|length=711bpback to top protein sequence of NO02G01850.1 >NO02G01850.1-protein ID=NO02G01850.1-protein|Name=NO02G01850.1|organism=Nannochloropsis oceanica|type=polypeptide|length=237bpback to top Synonyms
Publications
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