NO02G01810, NO02G01810 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G01810 vs. NCBI_GenBank
Match: XP_005856209.1 (trna-specific adenosine deaminase [Nannochloropsis gaditana CCMP526] >EKU20159.1 trna-specific adenosine deaminase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 260.4 bits (664), Expect = 6.400e-66 Identity = 140/223 (62.78%), Postives = 171/223 (76.68%), Query Frame = 0 Query: 55 VLSLLLLSTSSPFVIPASRPRSHDISACC-----HSQATSMNSTTTMTASLDDADERFMRLALVEAQAAFAAREIPVGAVLVSSEGQVLATGRNRVEATGDASAHAELECLRAASHCTDRLANGHWRMLDSTLYVTLEPCLMCLGAVQSFRVKRIVYGAPNIMLGAIESYIKVLEQAPHPFHACLEVRGGVQRDECGALMKRFFAERRLQSKILVEKERERDK 273 V L LLS P ++P +H C H+++ ++NS +T + ++ DE++M LAL+EAQAAFAA+E+PVGAVLVSSEGQVLATGRNRVEATGDASAHAELECLRAA+ R G WRML+ TLYVTLEPCLMCLGAVQSFRV+R+VYGA + +LGAIESY+KVLEQAPHPFH+ LEV+GGV +CG LMKRFFAERRL+S+ + K RE + Sbjct: 12 VTFLALLSLLCPILLP-----THAFLHTCRLSSPHARSFAVNSISTSASLRENQDEKYMALALIEAQAAFAAKEVPVGAVLVSSEGQVLATGRNRVEATGDASAHAELECLRAAALGAARHGQGKWRMLNCTLYVTLEPCLMCLGAVQSFRVQRVVYGARSTLLGAIESYVKVLEQAPHPFHSTLEVKGGVHAAQCGDLMKRFFAERRLESERMATKVREAQR 229
BLAST of NO02G01810 vs. NCBI_GenBank
Match: EWM30484.1 (trna-specific adenosine deaminase [Nannochloropsis gaditana]) HSP 1 Score: 260.4 bits (664), Expect = 6.400e-66 Identity = 140/223 (62.78%), Postives = 171/223 (76.68%), Query Frame = 0 Query: 55 VLSLLLLSTSSPFVIPASRPRSHDISACC-----HSQATSMNSTTTMTASLDDADERFMRLALVEAQAAFAAREIPVGAVLVSSEGQVLATGRNRVEATGDASAHAELECLRAASHCTDRLANGHWRMLDSTLYVTLEPCLMCLGAVQSFRVKRIVYGAPNIMLGAIESYIKVLEQAPHPFHACLEVRGGVQRDECGALMKRFFAERRLQSKILVEKERERDK 273 V L LLS P ++P +H C H+++ ++NS +T + ++ DE++M LAL+EAQAAFAA+E+PVGAVLVSSEGQVLATGRNRVEATGDASAHAELECLRAA+ R G WRML+ TLYVTLEPCLMCLGAVQSFRV+R+VYGA + +LGAIESY+KVLEQAPHPFH+ LEV+GGV +CG LMKRFFAERRL+S+ + K RE + Sbjct: 12 VTFLALLSLLCPILLP-----THAFLHTCRLSSPHARSFAVNSISTSASLRENQDEKYMALALIEAQAAFAAKEVPVGAVLVSSEGQVLATGRNRVEATGDASAHAELECLRAAALGAARHGQGKWRMLNCTLYVTLEPCLMCLGAVQSFRVQRVVYGARSTLLGAIESYVKVLEQAPHPFHSTLEVKGGVHAAQCGDLMKRFFAERRLESERMATKVREAQR 229
BLAST of NO02G01810 vs. NCBI_GenBank
Match: CEM35424.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 145.6 bits (366), Expect = 2.300e-31 Identity = 77/160 (48.12%), Postives = 103/160 (64.38%), Query Frame = 0 Query: 98 ASLDDADERFMRLALVEAQAAFAAREIPVGAVLVSSEGQVLATGRNRVEATGDASAHAELECLRAASHCTDRLANGHWRMLDSTLYVTLEPCLMCLGAVQSFRVKRIVYGAPNIMLGAIESYIKVLEQAPHPFHACLEVRGGVQRDECGALMKRFFAERR 258 A +DER+MRLAL +A A E+P+GAVLV +G+VL+ GRN VEA DA+AHAEL+C+R AS G WR+L+ TLY TLEPC MC+GA+Q R+ +VYGA + +G S++ + + HPFH + VRGGV E L++ FF E R Sbjct: 18 ADTHPSDERYMRLALQQAAMAAERGEVPIGAVLVDGQGEVLSVGRNGVEAAHDATAHAELQCIREASQIL-----GTWRLLNCTLYTTLEPCPMCVGAMQLARIHTLVYGASDNRMGGAGSWVSLATEPKHPFHQ-MAVRGGVMATEARQLLRTFFREAR 171
BLAST of NO02G01810 vs. NCBI_GenBank
Match: OAE35778.1 (hypothetical protein AXG93_3524s1130 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 141.7 bits (356), Expect = 3.300e-30 Identity = 80/180 (44.44%), Postives = 111/180 (61.67%), Query Frame = 0 Query: 94 TTMTASLDDADERFMRLALVEAQAAFAAREIPVGAVLVSSEGQVLATGRNRVEATGDASAHAELECLRAASHCTDRLANGHWRMLDSTLYVTLEPCLMCLGAVQSFRVKRIVYGAPNIMLGAIESYIKV----------------LEQAPHPFHACLEVRGGVQRDECGALMKRFFAERR 258 TT D DE+FM AL+EA+ A + E+PVGAV+V + G+++A NRVEA GD +AHAE+ C+R+AS NG WR+ D+++YVT+EPC MC GA+ RVKR+V+GA N +LGA S++ + L+Q HPFH +EVR V D+C +M+ FF RR Sbjct: 196 TTQCQWNDVEDEKFMLEALLEAKKAASLGEVPVGAVVVQN-GRIIARAFNRVEAEGDPTAHAEMLCIRSASK-----TNGDWRLTDASIYVTMEPCAMCAGALLQARVKRVVWGARNKLLGADGSWVSLFPNCESHVDGEAEQSSLQQQQHPFHKSVEVRREVLSDDCSMIMRTFFRSRR 369
BLAST of NO02G01810 vs. NCBI_GenBank
Match: PTQ35363.1 (hypothetical protein MARPO_0072s0096 [Marchantia polymorpha]) HSP 1 Score: 141.7 bits (356), Expect = 3.300e-30 Identity = 80/180 (44.44%), Postives = 111/180 (61.67%), Query Frame = 0 Query: 94 TTMTASLDDADERFMRLALVEAQAAFAAREIPVGAVLVSSEGQVLATGRNRVEATGDASAHAELECLRAASHCTDRLANGHWRMLDSTLYVTLEPCLMCLGAVQSFRVKRIVYGAPNIMLGAIESYIKV----------------LEQAPHPFHACLEVRGGVQRDECGALMKRFFAERR 258 TT D DE+FM AL+EA+ A + E+PVGAV+V + G+++A NRVEA GD +AHAE+ C+R+AS NG WR+ D+++YVT+EPC MC GA+ RVKR+V+GA N +LGA S++ + L+Q HPFH +EVR V D+C +M+ FF RR Sbjct: 176 TTQCQWNDVEDEKFMLEALLEAKKAASLGEVPVGAVVVQN-GRIIARAFNRVEAEGDPTAHAEMLCIRSASK-----TNGDWRLTDASIYVTMEPCAMCAGALLQARVKRVVWGARNKLLGADGSWVSLFPNCESHVDGEAEQSSLQQQQHPFHKSVEVRREVLSDDCSMIMRTFFRSRR 349
BLAST of NO02G01810 vs. NCBI_GenBank
Match: XP_005538889.1 (similar to cytidine/deoxycytidylate deaminase family protein [Cyanidioschyzon merolae strain 10D] >BAM82853.1 similar to cytidine/deoxycytidylate deaminase family protein [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 141.4 bits (355), Expect = 4.300e-30 Identity = 85/172 (49.42%), Postives = 107/172 (62.21%), Query Frame = 0 Query: 105 ERFMRLALVEAQAAFAAREIPVGAVLVSSEGQ-------VLATGRNRVEATGDASAHAELECLRAASHCTDRLANGHWRM-----------LDSTLYVTLEPCLMCLGAVQSFRVKRIVYGAPNIMLGAIESYIKVLEQA-PHPFHACLEVRGGVQRDECGALMKRFFAERR 258 E +MR+AL A+ A+ E+PVGA+LV G +LA GRNR+E DA+AHAE+ECLRAAS RL + WR+ TLY TLEPC MCL A+Q RV R+VYGAP + LGAIESY+ +L A PHPFH E+ GV +E +L++RFF ERR Sbjct: 122 EHYMRMALALAEEAYTNNEVPVGALLVVRNGPETDAPDVILARGRNRIEECCDATAHAEIECLRAAS---ARLRS--WRLNRAGSRDHPVPYHVTLYCTLEPCAMCLSAMQLARVTRLVYGAPGLRLGAIESYVPLLTVAPPHPFHRFSEIIPGVLANESASLLRRFFRERR 288
BLAST of NO02G01810 vs. NCBI_GenBank
Match: CBJ27558.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 140.6 bits (353), Expect = 7.400e-30 Identity = 82/187 (43.85%), Postives = 114/187 (60.96%), Query Frame = 0 Query: 84 HSQATSMNSTTTMTASLDDADERFMRLALVEAQAAFAAREIPVGAVLVSS-------EGQVLATGRNRVEATGDASAHAELECLRAASHCTDRLANGHWRMLDSTLYVTLEPCLMCLGAVQSFRVKRIVYGAPNIMLGAIESYIKVLEQAPHPFHACLEVRGGVQRDECGALMKRFFAERRLQSKIL 264 HS+A N + + ++ D+RFMR+AL A A E+P+GA+L + +VL+TGRN VE DASAHAE+ CL+AA+ A +WR+ +TLYVT+EPC MCL A Q FRV R+V+GAPN LGA ++ + Q H FH LEV+GGV +EC ++ FF RR + +I+ Sbjct: 315 HSKAVQENFASEVPKYSEEDDDRFMRMALRLAGRARMEGEVPIGAILAETVPTRRDGRRRVLSTGRNEVEGRRDASAHAEMLCLQAAAK-----ARSNWRLAGTTLYVTVEPCAMCLSAAQLFRVDRVVFGAPNPNLGACGGWVDLSSQR-HAFHE-LEVKGGVLAEECALPLRGFFRSRRREGEIV 494
BLAST of NO02G01810 vs. NCBI_GenBank
Match: XP_005849638.1 (hypothetical protein CHLNCDRAFT_20896, partial [Chlorella variabilis] >EFN57536.1 hypothetical protein CHLNCDRAFT_20896, partial [Chlorella variabilis]) HSP 1 Score: 140.2 bits (352), Expect = 9.600e-30 Identity = 84/161 (52.17%), Postives = 98/161 (60.87%), Query Frame = 0 Query: 97 TASLDDADERFMRLALVEAQAAFAAREIPVGAVLVSSEGQVLATGRNRVEATGDASAHAELECLRAASHCTDRLANGHWRMLDSTLYVTLEPCLMCLGAVQSFRVKRIVYGAPNIMLGAIESYIKVLEQAPHPFHACLEVRGGVQRDECGALMKRFFAERR 258 TA DD DERFMRLAL +A+ AF E+PVGAVLVS GQVLA RN E D +AHAEL C+R A+ A G WR+LD+TLYVTLEPC MC GA+ R + G + A + V PHPFH + VR GV ECG LM+ FFA RR Sbjct: 2 TAPHDD-DERFMRLALEQARLAFDDGEVPVGAVLVSGGGQVLAAARNAAEGAADPTAHAELLCIRQAA-----TAAGGWRLLDATLYVTLEPCPMCAGALLQVRRAGLCSGVEQLQ-AAPAAAAAVQPTRPHPFHPNMVVRRGVLAAECGDLMRSFFARRR 155
BLAST of NO02G01810 vs. NCBI_GenBank
Match: XP_005708495.1 (tRNA-specific adenosine deaminase [Galdieria sulphuraria] >EME31975.1 tRNA-specific adenosine deaminase [Galdieria sulphuraria]) HSP 1 Score: 139.0 bits (349), Expect = 2.100e-29 Identity = 73/157 (46.50%), Postives = 105/157 (66.88%), Query Frame = 0 Query: 105 ERFMRLALVEAQAAFAAREIPVGAVLVSSEGQVLATGRNRVEATGDASAHAELECLRAASHCTDRLANGHWRMLDSTLYVTLEPCLMCLGAVQSFRVKRIVYGAPNIMLGAIESYIKVLEQAPHPFHACLEVRGGVQRDECGALMKRFFAERRLQSK 262 E FMR+AL A+ +F E+P+GA+LV ++G+V+A GRN+VE T D + HAEL+C++AA+ G+WR+L++TLY TLEPC MCL A+Q RV IVYGA + LGAIES+ L Q HP+H + GG+ +EC +++FF+ R + Sbjct: 10 EYFMRIALELAKQSFYQGEVPIGAILVDAKGKVIAKGRNQVETTKDPTQHAELQCIQAATRVC-----GNWRLLNTTLYSTLEPCAMCLSALQLARVSFIVYGAKDFRLGAIESWYP-LVQVKHPYHRITHM-GGILEEECAEWIQKFFSNIRTNKR 159
BLAST of NO02G01810 vs. NCBI_GenBank
Match: XP_005717166.1 (unnamed protein product [Chondrus crispus] >CDF37347.1 unnamed protein product [Chondrus crispus]) HSP 1 Score: 137.9 bits (346), Expect = 4.800e-29 Identity = 75/154 (48.70%), Postives = 99/154 (64.29%), Query Frame = 0 Query: 108 MRLALVEAQAAFAAREIPVGAVLVSSEGQVLATGRNRVEATGDASAHAELECLRAASHCTDRLANGHWRMLDSTLYVTLEPCLMCLGAVQSFRVKRIVYGAPNIMLGAIESYIKVLEQAPHPFHACLEVRGGVQRDECGALMKRFFAERRLQSK 262 MR AL +A+ A++ E+PVGAVLV S G VL+ N VE+ D +AHAE+ C+R A+ A G+WR+ D+TLY TLEPC MCL A+ RV IVY A ++ LGA +++ L + HPFH +VRGGV DE LM+ FF ERR + K Sbjct: 21 MRYALAQARRAYSLGEVPVGAVLVCSSGAVLSAAHNLVESLHDPTAHAEILCVRRAA-----AAAGNWRLHDTTLYSTLEPCPMCLSALALARVGAIVYAAKDLRLGACGTWLP-LHEEKHPFHTFRDVRGGVLEDEAAELMRHFFRERRAEGK 168 The following BLAST results are available for this feature:
BLAST of NO02G01810 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G01810 ID=NO02G01810|Name=NO02G01810|organism=Nannochloropsis oceanica|type=gene|length=977bpback to top protein sequence of NO02G01810.1 >NO02G01810.1-protein ID=NO02G01810.1-protein|Name=NO02G01810.1|organism=Nannochloropsis oceanica|type=polypeptide|length=275bpback to top Synonyms
Publications
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