NO02G01780, NO02G01780 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G01780 vs. NCBI_GenBank
Match: OQR82056.1 (syntaxin [Thraustotheca clavata]) HSP 1 Score: 171.4 bits (433), Expect = 4.500e-39 Identity = 114/292 (39.04%), Postives = 165/292 (56.51%), Query Frame = 0 Query: 1 MATRDLTRKFVDYRT--TAKIIGRNSLSPLSGYTMDSGLLEDANRDGNTGWAAARLQLPPAWVDLVDRVDALTAQLEAKMKELEALHRKRLLVGFDDSEAAKERDIDYMTQEITATFREAESILKQLGGGERSEGGTERVVTRNVQKSMAKRIQGLSIEFRKTQKHYMAQLKAQKAGAGGAPFFDFLSAXXXXXXXXLEIERKMREEGGIEGGFTPEQLAVLEEQEAVTAERDQEIQHIARSIEELSQIFKELAVLVIDQGTVLDRIDFNMEQVVEHTKEGVHQLVRAEENQ 291 MATRDLTR +V R+ AK+ R + + + L+ +A + A++Q PAWVD V V+ A+++ M++L +H KRL+V FD SE+ ER+I+ +T EIT+ FR AE ILK G+ + +NVQ+++A ++Q LS +FRK+QK Y+ ++K Q+ G F+FLS E K + G++GGF QLA +E E + ERD+E+Q IA VIDQGT+LDRID+NMEQVVE T+ GV +L +AE Q Sbjct: 1 MATRDLTRTYVALRSDVKAKVARRRQMVSADVHMEGNSLMRNAEMRSDLE-GTAKMQGAPAWVDAVTDVNIHIARIKHLMEKLGKIHTKRLMVRFDGSESEHEREIESITGEITSEFRSAERILKAKMNGKDGISEADAKTRQNVQRALATQLQTLSADFRKSQKEYLDRVKNQRQGPAE---FEFLS------------EPKKTKTSGLDGGFMQAQLAEVELAEDLINERDREVQQIATXXXXXXXXXXXXXXXVIDQGTILDRIDYNMEQVVERTQAGVVELEKAETIQ 276
BLAST of NO02G01780 vs. NCBI_GenBank
Match: OEU17684.1 (t-SNARE [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 168.7 bits (426), Expect = 2.900e-38 Identity = 101/228 (44.30%), Postives = 141/228 (61.84%), Query Frame = 0 Query: 55 QLPPAWVDLVDRVDALTAQLEAKMKELEALHRKRLLVGFDDSEAAKERDIDYMTQEITATFREAESILKQLGGGERSEGGTERVVTRNVQKSMAKRIQGLSIEFRKTQKHYMAQLKAQKAGAGGAPFFDFLSAXXXXXXXXLEIERKMREEGGIEGGFTPEQLAVLEEQEAVTAERDQEIQHIARSIEELSQIFKELAVLVIDQGTVLDRIDFNMEQVVEHTKEGVHQ 283 Q P WV VD+V + + M++L +LH R+ F E I+ MT+++T FR AE ILKQ+G R GG E + N+Q+S+AK++Q LS++FR++Q+ Y+A+++AQK+G FD A +++ EEGG FT +Q+ V+++ + RDQEI IA+SIEEL IFKELAVLVIDQGT+LDRID+NME VVE TK GV Q Sbjct: 11 QKQPTWVVDVDQVKLILQDIRRLMEDLRSLHASRVGSVFGKDLDDMEIRIETMTRDVTDKFRRAERILKQVGTATRRAGGEEAAIGANIQRSLAKQLQELSVDFRQSQRKYLAEVRAQKSG------FDITGATSNDHFAGIDLS---TEEGGF---FTTQQVQVVDDLQEAIGSRDQEISKIAQSIEELGTIFKELAVLVIDQGTILDRIDYNMEAVVESTKTGVTQ 226
BLAST of NO02G01780 vs. NCBI_GenBank
Match: BAS01249.1 (syntaxin of plant 4 [Marchantia polymorpha] >PTQ39995.1 hypothetical protein MARPO_0042s0041 [Marchantia polymorpha]) HSP 1 Score: 166.8 bits (421), Expect = 1.100e-37 Identity = 110/308 (35.71%), Postives = 176/308 (57.14%), Query Frame = 0 Query: 1 MATRDLTRKFVDYRTTAK-------IIGRNSL---------SPLSGYTMDSGLLEDANRDGNTGWAAARLQLPPAWVDLVDRVDALTAQLEAKMKELEALHRKRLLVGFDDSEAAKERDIDYMTQEITATFREAESILKQLGGGERSEGGTERVVTRNVQKSMAKRIQGLSIEFRKTQKHYMAQLKAQKAGAGGAPFFDFLSAXXXXXXXXLEIERKMREEGG--IEGGFTPEQLAVLEEQEAVTAERDQEIQHIARSIEELSQIFKELAVLVIDQGTVLDRIDFNMEQVVEHTKEGVHQLVRAEENQ 291 MATR+ T F YR + + GR S +P G + ED + G + + LPPAWVD+ D V ++++KM EL H + L+V FDD+ +++ I+ +T EIT + ++ E L++L GG+ + G + + +NVQ+S+A +Q LS++FRK QK Y+ +L+ Q+AG GA S +++ RE+ + GF+ QL+ L++ EA++AER++EI I S+ +L+QI K+L+VLVIDQGT++DRID+N+ V ++GV +LV+AEE Q Sbjct: 1 MATRNQTALFKKYRDALRNVRPGPSVAGRGSSIELTEVFPGAPQRGRGYSTLSTEDDSDPTRAG--SISVSLPPAWVDISDEVSTEMNKVKSKMAELAKSHGRALMVSFDDN-TGEQQTIELLTAEITRSLKKCEQKLQRLSGGQGNSG--DENLRKNVQRSLATDLQSLSMDFRKLQKGYLGKLRLQEAGQSGADISMGFS------------QQRSREDDDEFSDVGFSTTQLSQLKQNEAMSAEREREITQIVESVNDLAQIMKDLSVLVIDQGTIVDRIDYNITNVSASVEQGVRELVKAEETQ 291
BLAST of NO02G01780 vs. NCBI_GenBank
Match: XP_008603887.1 (hypothetical protein SDRG_00198 [Saprolegnia diclina VS20] >XP_012205784.1 hypothetical protein SPRG_11392 [Saprolegnia parasitica CBS 223.65] >XP_012212015.1 hypothetical protein SPRG_17267 [Saprolegnia parasitica CBS 223.65] >EQC42464.1 hypothetical protein SDRG_00198 [Saprolegnia diclina VS20] >KDO17277.1 hypothetical protein SPRG_17267 [Saprolegnia parasitica CBS 223.65] >KDO23469.1 hypothetical protein SPRG_11392 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 165.6 bits (418), Expect = 2.500e-37 Identity = 111/292 (38.01%), Postives = 159/292 (54.45%), Query Frame = 0 Query: 1 MATRDLTRKFVDYR--TTAKIIGRNSLSPLSGYTMDSGLLEDANRDGNTGWAAARLQLPPAWVDLVDRVDALTAQLEAKMKELEALHRKRLLVGFDDSEAAKERDIDYMTQEITATFREAESILKQLGGGERSEGGTERVVTRNVQKSMAKRIQGLSIEFRKTQKHYMAQLKAQKAGAGGAPFFDFLSAXXXXXXXXLEIERKMREEGGIEGGFTPEQLAVLEEQEAVTAERDQEIQHIARSIEELSQIFKELAVLVIDQGTVLDRIDFNMEQVVEHTKEGVHQLVRAEENQ 291 MATRDLTR +V R AK+ R + + + L+ + R A PAWVD V V+ A+++ M++L +H KRL+V FD SE+ ER+I+ +T EIT FR AE ILK G+ + +NVQ+++A ++Q LS +FRK+QK Y+ ++K Q+ G F+FLS E K + G++GGF Q+A +E E + ERD+E+Q IA VIDQGT+LDRID+NMEQVVE T+ G+ +L +AE Q Sbjct: 1 MATRDLTRTYVALRKDVKAKVARRRQMVSPDVHMEGNSLIRNDMRSDLDVEMAKTAGPTPAWVDAVTDVNIHIARVKLLMEKLGKMHTKRLMVRFDGSESDHEREIESITGEITGEFRNAERILKAKMNGKDGVSEADAKARQNVQRALATQLQSLSADFRKSQKEYLDRVKNQRQGPAE---FEFLS------------ETKKTKTSGLDGGFMQAQMAEVELAEDLINERDREVQQIATXXXXXXXXXXXXXXXVIDQGTILDRIDYNMEQVVERTQAGIVELEKAETIQ 277
BLAST of NO02G01780 vs. NCBI_GenBank
Match: OWZ08393.1 (Syntaxin [Phytophthora megakarya]) HSP 1 Score: 164.1 bits (414), Expect = 7.200e-37 Identity = 107/275 (38.91%), Postives = 159/275 (57.82%), Query Frame = 0 Query: 1 MATRDLTRKFVDYRT--TAKIIGRNSLSPLSGYTMDSGLLEDANRDGNTGWAAARLQLPPAWVDLVDRVDALTAQLEAKMKELEALHRKRLLVGFDDSEAAKERDIDYMTQEITATFREAESILKQLGGGERSE--GGTERVVTRNVQKSMAKRIQGLSIEFRKTQKHYMAQLKAQKAGAGGAPFFDFLSAXXXXXXXXLEIERKMREEGGIEGGFTPEQLAVLEEQEAVTAERDQEIQHIARSIEELSQIFKELAVLVIDQGTVLDRIDFNMEQ 272 MATRDLTR+F+ R AK++ R ++ +S + L++ A + A + + P WVD+V+ + A+++ M++L LH RL+V FD SE+ E++ID+MTQEIT FR AE L+++ +R+ + +NVQ+++A ++Q LS++FRK+QK Y+A++K QK G FDFL+ E + K + GG + GFT Q+ +E E V ERD EIQ IA SI E IDQGT+LDRID+NMEQ Sbjct: 1 MATRDLTRQFLQLRADEKAKVLRRKNI--VSHREEGNALMKSAELE------ATSVAIAPGWVDVVNGTNQHVARIKEMMEKLNKLHTSRLMVRFDGSESRYEQEIDHMTQEITEEFRSAEKGLRRMAQSDRNGEFSAADAKTRQNVQRALATQLQTLSVDFRKSQKTYLARVKNQKE---GPVEFDFLA----------ENDAKQKRRGGADTGFTQAQITEVEIAEDVINERDHEIQRIATSITEXXXXXXXXXXXXIDQGTILDRIDYNMEQ 254
BLAST of NO02G01780 vs. NCBI_GenBank
Match: PKK70457.1 (t-SNARE [Rhizophagus irregularis]) HSP 1 Score: 163.7 bits (413), Expect = 9.400e-37 Identity = 112/300 (37.33%), Postives = 170/300 (56.67%), Query Frame = 0 Query: 1 MATRDLTRKFVDYRTTAKIIGRNSLSPL---SGY-----TMDSGLLEDANRDGNTGWAAARLQLPPAWVDLVDRVDALTAQLEAKMKELEALHRKRLLVGFDDSEAAKERDIDYMTQEITATFREAESILKQLGGGERSE--GGTERVVTRNVQKSMAKRIQGLSIEFRKTQKHYMAQLKAQKAGAGGAPFFDFLSAXXXXXXXXLEIERKMREEGGIEGGFTPEQLAVLEEQEAVTAERDQEIQHIARSIEELSQIFKELAVLVIDQGTVLDRIDFNMEQVVEHTKEGVHQLVRAEENQ 291 MATR+ T F+ YR T RN PL SGY + +GL+E ++ LPP W+D+VD VD Q++ + LE+LH+K +L GFDD +E++I+ +T EIT F++ +S +K++ S ER +++N+Q S+A ++Q LS FRK Q Y+ +LK ++ + G+ FF IE E +E GFT QLA +E EAV ++R++EI IA+SI +++IF+EL LVIDQGT+LDRID+N+EQ+ + K V +L + + Q Sbjct: 1 MATRNRTLLFLKYRNT---FARNHSRPLATSSGYDAYNTSEQAGLIESSDH------VIELTVLPPKWIDIVDEVDDDIDQIKNLLPTLESLHKKHILPGFDD-RTKEEKEIERLTDEITHLFQQCQSKIKRIANESLSSIAPNQERAMSKNIQTSLASKLQELSSSFRKQQASYLKKLKGRE--SKGSKFF--------------LIESNDSNEDDLELGFTSSQLARVESSEAVISQREREIIEIAKSIHTIAEIFRELQSLVIDQGTLLDRIDYNVEQMSVNVKSAVRELDKGAQYQ 274
BLAST of NO02G01780 vs. NCBI_GenBank
Match: EXX70536.1 (Tlg2p [Rhizophagus irregularis DAOM 197198w] >EXX70537.1 Tlg2p [Rhizophagus irregularis DAOM 197198w] >GBC53836.1 T-SNARE [Rhizophagus irregularis DAOM 181602] >PKC02775.1 t-SNARE [Rhizophagus irregularis] >PKC14328.1 t-SNARE [Rhizophagus irregularis] >PKC73333.1 t-SNARE [Rhizophagus irregularis] >PKY23628.1 t-SNARE [Rhizophagus irregularis] >PKY47926.1 t-SNARE [Rhizophagus irregularis] >POG75083.1 t-SNARE [Rhizophagus irregularis DAOM 181602=DAOM 197198]) HSP 1 Score: 163.3 bits (412), Expect = 1.200e-36 Identity = 112/300 (37.33%), Postives = 169/300 (56.33%), Query Frame = 0 Query: 1 MATRDLTRKFVDYRTTAKIIGRNSLSPL---SGY-----TMDSGLLEDANRDGNTGWAAARLQLPPAWVDLVDRVDALTAQLEAKMKELEALHRKRLLVGFDDSEAAKERDIDYMTQEITATFREAESILKQLGGGERSE--GGTERVVTRNVQKSMAKRIQGLSIEFRKTQKHYMAQLKAQKAGAGGAPFFDFLSAXXXXXXXXLEIERKMREEGGIEGGFTPEQLAVLEEQEAVTAERDQEIQHIARSIEELSQIFKELAVLVIDQGTVLDRIDFNMEQVVEHTKEGVHQLVRAEENQ 291 MATR T F+ YR T RN PL SGY + +GL+E ++ LPP W+D+VD VD Q++ + LE+LH+K +L GFDD +E++I+ +T EIT F++ +S +K++ S ER +++N+Q S+A ++Q LS FRK Q Y+ +LK ++ + G+ FF IE E +E GFT QLA +E EAV ++R++EI IA+SI +++IF+EL LVIDQGT+LDRID+N+EQ+ + K V +L + + Q Sbjct: 1 MATRSRTLLFLKYRNT---FARNHSRPLATSSGYDAYNTSEQAGLIESSDH------VIELTVLPPKWIDIVDEVDDDIDQIKNLLPTLESLHKKHILPGFDD-RTKEEKEIERLTDEITHLFQQCQSKIKRIANESLSSIAPNQERAMSKNIQTSLASKLQELSSSFRKQQASYLKKLKGRE--SKGSKFF--------------LIESNDSNEDDLELGFTSSQLARVESSEAVISQREREIIEIAKSIHTIAEIFRELQSLVIDQGTLLDRIDYNVEQMSVNVKSAVRELDKGAQYQ 274
BLAST of NO02G01780 vs. NCBI_GenBank
Match: OQR93563.1 (syntaxin-like protein [Achlya hypogyna]) HSP 1 Score: 162.2 bits (409), Expect = 2.700e-36 Identity = 112/294 (38.10%), Postives = 163/294 (55.44%), Query Frame = 0 Query: 1 MATRDLTRKFVDYRT--TAKIIGRNSLSPLSGYTMD-SGLLEDAN-RDGNTGWAAARLQLPPAWVDLVDRVDALTAQLEAKMKELEALHRKRLLVGFDDSEAAKERDIDYMTQEITATFREAESILKQLGGGERSEGGTERVVTRNVQKSMAKRIQGLSIEFRKTQKHYMAQLKAQKAGAGGAPFFDFLSAXXXXXXXXLEIERKMREEGGIEGGFTPEQLAVLEEQEAVTAERDQEIQHIARSIEELSQIFKELAVLVIDQGTVLDRIDFNMEQVVEHTKEGVHQLVRAEENQ 291 MATRDLTR +V RT AK+ R + M+ + L+ +A R A + P WVD V V+ A+++ M++L +H KRL+V FD+SE+ ER+I+ +T +IT FR AE ILK G+ + +NVQ+++A ++Q LS +FRK+QK Y+ ++K Q+ G F+FLS +K + G++GGF Q+A +E E + ERD+E+Q IA VIDQGT+LDRID+NMEQVVE T+ GV +L +AE Q Sbjct: 1 MATRDLTRTYVALRTDVRAKVARRRQMVGSPDVHMEGNSLMRNAEMRSDLDIELAKKAAQTPGWVDAVTDVNIHIARIKLLMEKLGKMHTKRLMVRFDNSESDHEREIESITADITNEFRNAERILKAKMNGKDGVSEADAKARQNVQRALATQLQTLSADFRKSQKEYLDRVKNQRQGPAE---FEFLSE-----------TKKTSKTSGLDGGFMQAQMAEVELAEDLINERDREVQQIATXXXXXXXXXXXXXXXVIDQGTILDRIDYNMEQVVERTQAGVVELEKAETIQ 280
BLAST of NO02G01780 vs. NCBI_GenBank
Match: XP_002185756.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >ACI65226.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 161.4 bits (407), Expect = 4.700e-36 Identity = 101/226 (44.69%), Postives = 136/226 (60.18%), Query Frame = 0 Query: 58 PAWVDLVDRVDALTAQLEAKMKELEALHRKRLLVGFDDSEAAKERDIDYMTQEITATFREAESILKQLGGGERSEGGTERVVTRNVQKSMAKRIQGLSIEFRKTQKHYMAQLKAQKAGAGGAPFFDFLSAXXXXXXXXLEIERKMREEGGIEGGFTPEQLAVLEEQEAVTAERDQEIQHIARSIEELSQIFKELAVLVIDQGTVLDRIDFNMEQVVEHTKEGVHQL 284 P+WV VD+V+ L A+M++L +H R+ F E I+ T+EIT FR AE IL+++G R GG E V NVQ+S+AKR+Q LS+ FR++Q+ Y+A+++ QK+G G P D I+ G FT +QLAV+++ RD EI IA+SIEEL IFKELAVLVIDQGT+LDRID+NME VV+HTK G+ QL Sbjct: 8 PSWVTDVDQVEQCLVDLRAQMEDLHKMHASRVGSVFGKDLEDMEGRIESRTREITDQFRVAERILQKVGVATRRAGGEEATVGANVQRSLAKRLQELSVNFRQSQRKYLAEVRTQKSG-GLVPGAD----------SRFGIDLHTESSGEF---FTTQQLAVVDDLTEAVQSRDTEIVKIAQSIEELGTIFKELAVLVIDQGTILDRIDYNMEAVVDHTKTGIKQL 219
BLAST of NO02G01780 vs. NCBI_GenBank
Match: OAE29301.1 (hypothetical protein AXG93_3102s1270 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 161.4 bits (407), Expect = 4.700e-36 Identity = 110/320 (34.38%), Postives = 175/320 (54.69%), Query Frame = 0 Query: 1 MATRDLTRKFVDYRTTAK-------IIGRNSL---------SPLSGYTMDSGLLEDANRDGNTGWAAARLQLPPAWVDLVDRVDALTAQLEAKMKELEALHRKRLLVGFDDSEAAKERDIDYMTQEITATFREAESILKQLGGGERSEGGTERVVTRNVQKSMAKRIQGLSIEFRKTQKHYMAQLKAQKAGAGGAPFF------------DFLSAXXXXXXXXLEIERKMREEGGI--EGGFTPEQLAVLEEQEAVTAERDQEIQHIARSIEELSQIFKELAVLVIDQGTVLDRIDFNMEQVVEHTKEGVHQLVRAEENQ 291 MATR+ T F YR + + GR S +P G + ED + G + + LPPAWVD+ D V ++++KM EL H + L+V FDD+ +++ I+ +T EIT + ++ E L++L GG+ + G + + +NVQ+S+A +Q LS++FRK QK Y+ +L+ Q+AG GA D S + ++ + I GF+ QL+ L++ EA++AER++EI I S+ +L+QI K+L+VLVIDQGT++DRID+N+ V ++GV +LV+AEE Q Sbjct: 89 MATRNQTALFKKYRDALRNVRPGPSVAGRGSSIELTEVFPGAPQRGRGYSTLSTEDDSDPTRAG--SISVSLPPAWVDISDEVSTEMNKVKSKMAELAKSHGRALMVSFDDN-TGEQQTIELLTAEITRSLKKCEQKLQRLSGGQGNSG--DENLRKNVQRSLATDLQSLSMDFRKLQKGYLGKLRLQEAGQSGADISMGFSQQRSREDDDEFSDVMTLPGFVVALKDQWSSPSDILVMQGFSTTQLSQLKQNEAMSAEREREITQIVESVNDLAQIMKDLSVLVIDQGTIVDRIDYNITNVSASVEQGVRELVKAEETQ 403 The following BLAST results are available for this feature:
BLAST of NO02G01780 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G01780 ID=NO02G01780|Name=NO02G01780|organism=Nannochloropsis oceanica|type=gene|length=1746bpback to top protein sequence of NO02G01780.1 >NO02G01780.1-protein ID=NO02G01780.1-protein|Name=NO02G01780.1|organism=Nannochloropsis oceanica|type=polypeptide|length=319bpback to top Synonyms
Publications
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