NO02G01780, NO02G01780 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G01780 vs. NCBI_GenBank
Match: EWM30526.1 (qa- syp4 tlg2p syntaxin 16-type [Nannochloropsis gaditana]) HSP 1 Score: 448.7 bits (1153), Expect = 1.500e-122 Identity = 241/291 (82.82%), Postives = 258/291 (88.66%), Query Frame = 0 Query: 1 MATRDLTRKFVDYRTTAKIIGRNSLSPLSGYTMDSGLLEDANRDGNTGWAAARLQLPPAWVDLVDRVDALTAQLEAKMKELEALHRKRLLVGFDDSEAAKERDIDYMTQEITATFREAESILKQLG-GGERSEGGTERVVTRNVQKSMAKRIQGLSIEFRKTQKHYMAQLKAQKAGAGGAPFFDFLSAXXXXXXXXLEIERKMREEGGIEGGFTPEQLAVLEEQEAVTAERDQEIQHIARSIEELSQIFKELAVLVIDQGTVLDRIDFNMEQVVEHTKEGVHQLVRAEENQ 291 MATRDLTRK+VDYRTTAKIIGRNSLSPLSGYTMDSGLLEDA++D NTGWAAAR+QLPPAWVDLVDRVD LTAQ+EAKMKELEALHRKRLLVGFDDSEAA+ERDID++TQEIT REAES LKQLG TE++VTRNVQKSMAKRIQ LSIEFR +QKHYMAQLKAQK+GA AP FDFL+A LE ER+ REE G+EGGFTPEQLAVLEEQE TAERD+EIQHIARSIEELSQIF+ELAVLVIDQGTVLDRIDFNMEQVVEHTKEGVHQLVRAEENQ Sbjct: 1 MATRDLTRKYVDYRTTAKIIGRNSLSPLSGYTMDSGLLEDASQDSNTGWAAARMQLPPAWVDLVDRVDTLTAQIEAKMKELEALHRKRLLVGFDDSEAARERDIDFITQEITGMLREAESALKQLGXXXXXXXXXTEKLVTRNVQKSMAKRIQALSIEFRASQKHYMAQLKAQKSGA--APLFDFLAA----GHDTLETERRAREENGMEGGFTPEQLAVLEEQEVTTAERDREIQHIARSIEELSQIFRELAVLVIDQGTVLDRIDFNMEQVVEHTKEGVHQLVRAEENQ 285
BLAST of NO02G01780 vs. NCBI_GenBank
Match: CBJ48847.1 (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) [Ectocarpus siliculosus]) HSP 1 Score: 245.0 bits (624), Expect = 3.200e-61 Identity = 148/293 (50.51%), Postives = 193/293 (65.87%), Query Frame = 0 Query: 1 MATRDLTRKFVDYRTTAK-IIGRNSLSPLSGYTM-DSGLLEDANRDGNTGWAAARLQLPPAWVDLVDRVDALTAQLEAKMKELEALHRKRLLVGFDDSEAAKERDIDYMTQEITATFREAESILKQLGGGERSEGGTERVVTRNVQKSMAKRIQGLSIEFRKTQKHYMAQLKAQKAGAGGAPFFDFLSAXXXXXXXXLEIERKMRE-EGGIEGGFTPEQLAVLEEQEAVTAERDQEIQHIARSIEELSQIFKELAVLVIDQGTVLDRIDFNMEQVVEHTKEGVHQLVRAEENQ 291 MATRDLTR+F + R + G S S G +SGLL+DA+ T WA+ R QLPP WVD VD V+ ++ K++EL ALH KRL+V FD+SEA +ERD++ T+E+TA FR AE LK L G E V N+Q++ A+++Q LS FR +QK Y+ +L+AQK G G FDFL+ E ER + +G ++ GF +Q+AVLE+ E + +RD EI +I +SIE+LS IFKELAVLVIDQGT+LDRIDFNMEQVVEHT+EGV QL RAEE+Q Sbjct: 1 MATRDLTRRFAELRVLQHGVEGSASESKRPGDAFSESGLLDDAST--GTSWASTRHQLPPLWVDKVDGVEEDVRLIQLKLRELSALHTKRLMVTFDESEAERERDVEDATREVTALFRRAERQLKHLMGESAGLTPAEATVRNNIQRATARKLQSLSGGFRTSQKDYLRRLQAQKKGDGA---FDFLA----------EEERASKHAKGRLDPGFNEQQMAVLEDTEVLVGQRDGEINNIVKSIEDLSTIFKELAVLVIDQGTILDRIDFNMEQVVEHTREGVSQLQRAEEHQ 278
BLAST of NO02G01780 vs. NCBI_GenBank
Match: XP_009036287.1 (hypothetical protein AURANDRAFT_53459 [Aureococcus anophagefferens] >EGB09176.1 hypothetical protein AURANDRAFT_53459 [Aureococcus anophagefferens]) HSP 1 Score: 202.2 bits (513), Expect = 2.400e-48 Identity = 136/303 (44.88%), Postives = 180/303 (59.41%), Query Frame = 0 Query: 1 MATRDLTRKFVDYRT---------TAKIIGRNSLSPLSGYTMDSGLLEDANRDGNTGWAAARLQLPPAWVDLVDRVDALTAQLEAKMKELEALHRKRLLVGFDDS-EAAKERDIDYMTQEITATFREAESILKQL---GGGERSEGGTERVVTRNVQKSMAKRIQGLSIEFRKTQKHYMAQLKAQKAGAGGAPFFDFLSAXXXXXXXXLEIERKMREEGGIEGGFTPEQLAVLEEQEAVTAERDQEIQHIARSIEELSQIFKELAVLVIDQGTVLDRIDFNMEQVVEHTKEGVHQLVRAEENQ 291 MA+RDLTRKFV++R+ + R S + GY D+ + A LPP WVDLV+RV+ ++E ++L ALH KRL+V FDD+ EAA + +I +E T FR ES LK++ GG + S+ +ER + N+Q+S+A RIQ L+ +FRK QK YM +LK+QK G+ G FDFLS E EG F QLA + + E + ERD EI+ IA SI+ELS IFKELAVLVIDQGTVLDRIDFNMEQV EHT++GV ++ +AE+ Q Sbjct: 1 MASRDLTRKFVEWRSARPRRAAPGALRSNSREDRSLVGGYASDTSEPPEP--------ATLPPTLPPVWVDLVERVEGDVLKIERATRDLAALHTKRLMVSFDDAGEAALDDEIAAKQREATKLFRACESSLKRVAAHGGDDLSD--SERTIRSNIQRSVAMRIQALNTDFRKAQKEYMVRLKSQKEGSTGT--FDFLSGG----------EASSAAEG---VDFNDRQLAAVVDVENLVDERDGEIKQIAESIQELSTIFKELAVLVIDQGTVLDRIDFNMEQVAEHTRKGVVEIEKAEQYQ 278
BLAST of NO02G01780 vs. NCBI_GenBank
Match: CCI49289.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 192.6 bits (488), Expect = 1.900e-45 Identity = 121/293 (41.30%), Postives = 175/293 (59.73%), Query Frame = 0 Query: 1 MATRDLTRKFVDYRT--TAKIIGRNSLSPLSGYTMDSGLLEDANRDGNTGWAAARLQLPPAWVDLVDRVDALTAQLEAKMKELEALHRKRLLVGFDDSEAAKERDIDYMTQEITATFREAESILKQLGGGERSE-GGTERVVTRNVQKSMAKRIQGLSIEFRKTQKHYMAQLKAQKAGAGGAPFFDFLSAXXXXXXXXLEIERKMREEGGIEGGFTPEQLAVLEEQEAVTAERDQEIQHIARSIEELSQIFKELAVLVIDQGTVLDRIDFNMEQVVEHTKEGVHQLVRAEENQ 291 MATRDLTR +++ RT AKI+ R + + GY + G+L+ + G+ W P WV V+ D A ++ + L LH KRL+V FD SE+ E++I++MT+EIT FR+AE +LK + + + + +NV+ ++A ++Q LS +FRK+QK Y+ ++K QK G FDFLS + + +E GF Q+ ++ E + ERD EIQ IA SI EL+ IFKELAVLVIDQGT+LDRID+NMEQVVE T++GV +L +AE+ Q Sbjct: 1 MATRDLTRMYLELRTDAKAKILRRKN---MMGYADEEGILQ--RKGGHGKWDKREKGDSPPWVHAVEETDRYVAHIKELVDNLNKLHTKRLMVRFDGSESQNEQEIEHMTREITQEFRKAEKVLKSMDSKSQDDMSAADAKAHQNVKTALATQLQALSSDFRKSQKQYLLRVKNQKQ---GPVEFDFLSE-----------SSAVGKRAAMEMGFDQAQMTEVDIAEDIINERDAEIQKIATSITELATIFKELAVLVIDQGTILDRIDYNMEQVVEQTEKGVLELEKAEQTQ 274
BLAST of NO02G01780 vs. NCBI_GenBank
Match: EWM27922.1 (qa- syp4 tlg2p syntaxin 16-type [Nannochloropsis gaditana]) HSP 1 Score: 189.5 bits (480), Expect = 1.600e-44 Identity = 115/247 (46.56%), Postives = 145/247 (58.70%), Query Frame = 0 Query: 45 GNTGWAAARLQLPPAWVDLVDRVDALTAQLEAKMKELEALHRKRLLVGFDD-SEAAKERDIDYMTQEITATFREAESILKQLGGGERSEGGTERVVTRNVQKSMAKRIQGLSIEFRKTQKHYMAQLKAQKAGAGGAPFFDFLSAXXXXXXXXLEIERKMREEGGIEGGFTPEQLAVLEEQEAVTAERDQEIQHIARSIEELSQIFKELAVLVIDQGTVLDRIDFNMEQVVEHTKEGVHQLVRAEENQ 291 G T W AAR QLPP WVD+VDRVD ++ +MKEL LHRKRLLV FD+ +EA KE++I +T+ IT FR E L +GG E E V RN+Q+SMA + Q LS FR QK Y+ +L+AQK GA G F FL + R E GF Q+ VLE EA+ ERD EI IA IE L+ + K L LVIDQG+VLDRID+N++ V+ ++GV QL E+ Q Sbjct: 38 GGTDWQAARSQLPPLWVDVVDRVDEAIRNIQGQMKELSRLHRKRLLVSFDEKAEAGKEQEILALTEAITEQFRVVERKLTAVGGQMEGESDAEVKVRRNLQRSMASKTQRLSHAFRFQQKDYLKKLRAQKEGAMGGGEFAFLDKDEGGEPVLVPDNRS-------ETGFRQAQVTVLESAEALVQERDSEIARIAEGIEALAHVMKRLGELVIDQGSVLDRIDYNIDMAVDRVQQGVTQLEATEKIQ 277
BLAST of NO02G01780 vs. NCBI_GenBank
Match: GBG28253.1 (Syntaxin-42 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 186.0 bits (471), Expect = 1.800e-43 Identity = 124/289 (42.91%), Postives = 173/289 (59.86%), Query Frame = 0 Query: 1 MATRDLTRKFVDYRTTAKIIGRNSLSPLSGYTMDSGLLEDANRDGNTGWAAARLQLPPAWVDLVDRVDALTAQLEAKMKELEALHRKRLLVGFDDSEAAKERDIDYMTQEITATFREAE-SILKQLGGGE-RSEGGTERVVTRNVQKSMAKRIQGLSIEFRKTQKHYMAQLKAQKAGAGGAPFFDFLSAXXXXXXXXLEIERKMREEGGIE-GGFTPEQLAVLEEQEAVTAERDQEIQHIARSIEELSQIFKELAVLVIDQGTVLDRIDFNMEQVVEHTKEGVHQLVRA 287 MATR+LTRKF R G N G+ S + + NT LPP WVD V++V+ + Q+E ++ +L HRKRL+V FD++E ++R+ID +T++IT FR+AE +++++ + R+ G + +V +N+Q+ +A+++Q LS+ FRK+QK YM +LK+QK GG D L A E+ +E GFT EQ +LE E ERDQEIQ IA SI EL+ IFKELAVLVIDQGTVLDRID+NME VV T + V QL +A Sbjct: 1 MATRNLTRKFKQLRE-----GFNERRRPRGFGA-SPIADSTTEMMNT--------LPPHWVDSVEQVNDVIRQIEQQISKLHEAHRKRLMVRFDEAEGMRDREIDILTKQITDKFRQAERKLMERIAKPDARTRGTGDELVRKNIQRQLAQQLQTLSMSFRKSQKEYMTRLKSQK---GGGDLDDLLGADP--------------EQPSVEVDGFTDEQAVLLELAETNVEERDQEIQKIATSINELAAIFKELAVLVIDQGTVLDRIDYNMENVVMQTDKAVEQLKKA 258
BLAST of NO02G01780 vs. NCBI_GenBank
Match: GAX21461.1 (syntaxin 16 [Fistulifera solaris]) HSP 1 Score: 176.8 bits (447), Expect = 1.100e-40 Identity = 120/301 (39.87%), Postives = 173/301 (57.48%), Query Frame = 0 Query: 1 MATRDLTRKFVDYRTTA---KIIG------RNSLSPLSGYTMDSGLLEDANRDGNTGWAAARLQLPPAWVDLVDRVDALTAQLEAKMKELEALHRKRLLVGFDDSEAAKERDIDYMTQEITATFREAESILKQLGGGERSEGGTERVVTRNVQKSMAKRIQGLSIEFRKTQKHYMAQLKAQKAGAGGAPFFDFLSAXXXXXXXXLEIERKMREEGGIEGG--FTPEQLAVLEEQEAVTAERDQEIQHIARSIEELSQIFKELAVLVIDQGTVLDRIDFNMEQVVEHTKEGVHQLVRAEENQ 291 MA+RDLT F++ R+ + +G NS L+ D L E+ G + PPAWV+ V V+ ++ + M++L+++H +R+ F E I+ TQ++T FR AE +L+++G R GG E +V NVQ+S+AKR+Q S+ FR++Q+ Y+A+++ QK+G G AP L G E G FT +Q+AV+++ A RDQEI IA+SIEEL IFKELAVLVIDQGT+LDRID+NME VVEHTK G+ QL +AE++Q Sbjct: 1 MASRDLTSAFLERRSAVMRKRTLGGSPSKADNSYKKLTAGGHDLMLAEE-------GIQMTAMGQPPAWVNDVQAVEGCLTEISSMMEQLKSMHAQRVGSVFGKDLQNMEGKIERYTQDLTDQFRYAERLLQKVGMATRRVGGEEAMVGANVQRSLAKRLQEQSLAFRQSQRKYLAEVQTQKSG-GLAPDLGGLDL-------------------GAESGDFFTTQQMAVVDDLTAAVQSRDQEIVKIAQSIEELGTIFKELAVLVIDQGTILDRIDYNMEAVVEHTKTGIKQLEKAEKHQ 274
BLAST of NO02G01780 vs. NCBI_GenBank
Match: XP_009826246.1 (hypothetical protein H257_03727 [Aphanomyces astaci] >ETV84554.1 hypothetical protein H257_03727 [Aphanomyces astaci]) HSP 1 Score: 176.4 bits (446), Expect = 1.400e-40 Identity = 121/296 (40.88%), Postives = 169/296 (57.09%), Query Frame = 0 Query: 1 MATRDLTRKFVDYRT--TAKIIGRNSLSPLS--GYTMDSGLLEDA--NRDGNTGWAAARLQLPPAWVDLVDRVDALTAQLEAKMKELEALHRKRLLVGFDDSEAAKERDIDYMTQEITATFREAESILKQLGGGERSEGGTERVVTRNVQKSMAKRIQGLSIEFRKTQKHYMAQLKAQKAGAGGAPFFDFLSAXXXXXXXXLEIERKMREEGGIEGGFTPEQLAVLEEQEAVTAERDQEIQHIARSIEELSQIFKELAVLVIDQGTVLDRIDFNMEQVVEHTKEGVHQLVRAEENQ 291 MATRDLTR FV+ RT AK+ R ++ S + + L+ +A D + AAA Q P WVD V V+ A+++ M++L + KRL+V FDDSE ER+I+ +T +ITA FR+AE ILK+ G+ + +NVQ+++A ++Q LS EFRK QK Y+ ++K Q+ G FDFLS E+K + GI+GGF QLA +E E + ERD+E+Q IA VIDQGT+LDRID+NMEQVVE T+ G+ +L +AE Q Sbjct: 1 MATRDLTRPFVNLRTDVKAKVTRRRQMASHSPDAHHEANSLMRNAEMRSDIDLEAAAALAQDTPLWVDAVTDVNIHVARVKELMEKLTKIRTKRLMVRFDDSETDHEREIESITADITAEFRKAEGILKRKMNGKDGVTDADAKTRQNVQRALATQLQTLSGEFRKAQKEYLDRVKTQRQ---GPKEFDFLSE-----------EKKPKRSTGIDGGFMQAQLAEVELAEDLINERDREVQQIATXXXXXXXXXXXXXXXVIDQGTILDRIDYNMEQVVERTQAGIVELTKAETIQ 282
BLAST of NO02G01780 vs. NCBI_GenBank
Match: XP_008870848.1 (hypothetical protein H310_07269 [Aphanomyces invadans] >ETW00713.1 hypothetical protein H310_07269 [Aphanomyces invadans]) HSP 1 Score: 174.9 bits (442), Expect = 4.100e-40 Identity = 122/297 (41.08%), Postives = 170/297 (57.24%), Query Frame = 0 Query: 1 MATRDLTRKFVDYRTTAKI-IGRN----SLSPLSGYTMDSGLLEDA--NRDGNTGWAAARLQLPPAWVDLVDRVDALTAQLEAKMKELEALHRKRLLVGFDDSEAAKERDIDYMTQEITATFREAESILKQLGGGERSEGGTERVVTRNVQKSMAKRIQGLSIEFRKTQKHYMAQLKAQKAGAGGAPFFDFLSAXXXXXXXXLEIERKMREEGGIEGGFTPEQLAVLEEQEAVTAERDQEIQHIARSIEELSQIFKELAVLVIDQGTVLDRIDFNMEQVVEHTKEGVHQLVRAEENQ 291 MATRD+TR FV RT K+ + R S SP + +S L+ +A D + AA+ Q P WVD V V+ A+++ M +L + KRL+V FDDSE A+ER+I+ +T +ITA FR+AE ILK+ G+ + +NVQ+++A ++Q LS EFRK QK Y+ ++K Q+ G FDFLS E+K + GI+GGF QLA +E E + ERD+E+Q IA VIDQGT+LDRID+NMEQVVE T+ G+ +L +AE Q Sbjct: 1 MATRDITRPFVILRTDVKVKVARRRQMASHSPDVHHEANS-LMRNAEMRSDIDLEAAASLAQNTPVWVDAVTDVNIHIARVKDLMDKLTKIRTKRLMVRFDDSETAQEREIESITADITAEFRKAEGILKRKMNGKDGVSDADAKTRQNVQRALATQLQTLSGEFRKAQKEYLDRVKTQRQ---GPKEFDFLSE-----------EKKPKRSTGIDGGFMQAQLAEVELAEDLINERDREVQQIATXXXXXXXXXXXXXXXVIDQGTILDRIDYNMEQVVERTQAGIVELEKAETIQ 282
BLAST of NO02G01780 vs. NCBI_GenBank
Match: GAX17191.1 (syntaxin 16 [Fistulifera solaris]) HSP 1 Score: 171.8 bits (434), Expect = 3.500e-39 Identity = 119/301 (39.53%), Postives = 171/301 (56.81%), Query Frame = 0 Query: 1 MATRDLTRKFVDYRTTA---KIIG------RNSLSPLSGYTMDSGLLEDANRDGNTGWAAARLQLPPAWVDLVDRVDALTAQLEAKMKELEALHRKRLLVGFDDSEAAKERDIDYMTQEITATFREAESILKQLGGGERSEGGTERVVTRNVQKSMAKRIQGLSIEFRKTQKHYMAQLKAQKAGAGGAPFFDFLSAXXXXXXXXLEIERKMREEGGIEGG--FTPEQLAVLEEQEAVTAERDQEIQHIARSIEELSQIFKELAVLVIDQGTVLDRIDFNMEQVVEHTKEGVHQLVRAEENQ 291 MA+RDLT F++ R+ + +G NS L+ D L E+ G + PAWV+ V V+ ++ + M++L+++H +R+ F E I+ TQ++T FR AE +L+++G R GG E +V NVQ+S+AKR+Q S+ FR++Q+ Y+A+++ QK G G AP L G E G FT +Q+AV+++ A RDQEI IA+SIEEL IFKELAVLVIDQGT+LDRID+NME VVEHTK G+ QL +AE++Q Sbjct: 1 MASRDLTSAFLERRSAVMRKRTLGGSPSKADNSYKKLTAGGHDLMLAEE-------GIQMTAMGQTPAWVNDVQAVEGCLTEISSMMEQLKSMHAQRVGSVFGKDLQNMEGKIERYTQDLTDQFRYAERLLQKVGMATRRVGGEEAMVGTNVQRSLAKRLQEQSLAFRQSQRKYLAEVQIQKNG-GLAPDLGGLDL-------------------GAESGDFFTTQQMAVVDDLTAAVHSRDQEIVKIAQSIEELGTIFKELAVLVIDQGTILDRIDYNMEAVVEHTKTGIKQLEKAEKHQ 274 The following BLAST results are available for this feature:
BLAST of NO02G01780 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G01780 ID=NO02G01780|Name=NO02G01780|organism=Nannochloropsis oceanica|type=gene|length=1746bpback to top protein sequence of NO02G01780.1 >NO02G01780.1-protein ID=NO02G01780.1-protein|Name=NO02G01780.1|organism=Nannochloropsis oceanica|type=polypeptide|length=319bpback to top Synonyms
Publications
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