NO02G01710, NO02G01710 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G01710 vs. NCBI_GenBank
Match: EWM30533.1 (transcription initiation factor tfiid subunit 5 [Nannochloropsis gaditana]) HSP 1 Score: 724.9 bits (1870), Expect = 2.100e-205 Identity = 444/636 (69.81%), Postives = 484/636 (76.10%), Query Frame = 0 Query: 1 MEQAQQEERVLLWLKKRGYTQVAKHYEEDQAHAAEGSTEDNEEGSESSAPAEGSAPADEHLLCKRIGEANQNALLFRSIQLADPTLYHQSYNELQTWTCNALEAYKPELLTVAFPVFVHSYLKLVEHGMVEAARIFFQTWGPDHAEAYQMELRSLGAVQRPDQLTAGNGFVKRALTDKLVLRLCSTSYRLLQGFLSDHNLLSIMEILNERVQVVIEERGPRPRFEVVTFRDDGVAGRGGRGEGDGSPRKNGRYEMAHGFTVRWRVYRQKDGDHRDDSSMPPFNASLVPKLHKLSSKYRQEAAIGTADPTRPTVLMGTLTNTYDGCIVARMTEDATQLAAGFHDRAVRVFRLAGQGPAGGEGGSSS-------VHASSGPLIMRGHSQPVYGLSWAPEQQHLLSASGDGTVRLWDVAASRNVCVYRAPTDVPVWDVAFSPVGHFFASGSYDRVARVWSTNRTKPVRLLVGHYSDVSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAGAGGRGEHGEENGVIRIWEVASGREVALLSGHRGGINRLTYSHDGKVLASAGEDETVCTWDVHGDFASLTASLPLTPQSRFSTKATRVMDVAFTKRNLLLACGPV 630 ME AQQEERVL WLKKRGYT+VAKHYEEDQAHAA GS E+ E +SS P+ A DE LLCKRIGEANQ+ALLFRS++++DP LYH++YNELQTWTCNALEAYKPELLTVAFPVFVHSYLKLVE GM+EAAR F QTWGPDHAE YQ+ELRSL AVQRPD LTAGNGFVKRALTDK VLRLCS SYRLLQ FLSDHNLL IMEILNE+V VV+EER P PRF+VVT GGRG +++H FTVRWR D +DDSS PP+NA L KL L++K RQE A+G ADP PTVLM +LTNTYDGC VARMT DATQLAAGFHDRAVRVFRLAG+GP G E G+ S A GPLIMRGHSQPV+G+SWAPEQQHLLSAS DGTVRLWDVAASRNVCVYR+PTDVPVWDV+F+PVGH+FASGSYDRV RVW TNRT+PVRLLVGHYSDVSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAG G G D TV TWD++GDFASL +S+ L P S F TKAT V+DV FTKRNLLLA GP+ Sbjct: 1 MEDAQQEERVLHWLKKRGYTEVAKHYEEDQAHAAVGSAEEGNESEDSSVPS--GAFTDERLLCKRIGEANQSALLFRSLRMSDPMLYHRNYNELQTWTCNALEAYKPELLTVAFPVFVHSYLKLVERGMIEAARAFLQTWGPDHAETYQLELRSLTAVQRPDHLTAGNGFVKRALTDKFVLRLCSISYRLLQSFLSDHNLLLIMEILNEQVHVVVEERPPMPRFQVVT---------GGRG------------QISHAFTVRWRATGLGGSDVKDDSSRPPYNAPLFQKLEALAAKTRQEIAMGVADPGNPTVLMASLTNTYDGCTVARMTTDATQLAAGFHDRAVRVFRLAGEGPVGMENGNGSKLHSDGGEQAPEGPLIMRGHSQPVHGVSWAPEQQHLLSASSDGTVRLWDVAASRNVCVYRSPTDVPVWDVSFAPVGHYFASGSYDRVGRVWCTNRTQPVRLLVGHYSDVSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAGLG--GGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMTVRTWDMNGDFASLMSSVSLAPHSTFHTKATPVLDVTFTKRNLLLASGPI 611
BLAST of NO02G01710 vs. NCBI_GenBank
Match: XP_005852804.1 (transcription initiation factor tfiid subunit, partial [Nannochloropsis gaditana CCMP526] >XP_005856200.1 transcription initiation factor tfiid subunit, partial [Nannochloropsis gaditana CCMP526] >EKU20150.1 transcription initiation factor tfiid subunit, partial [Nannochloropsis gaditana CCMP526] >EKU23028.1 transcription initiation factor tfiid subunit, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 375.6 bits (963), Expect = 3.100e-100 Identity = 189/236 (80.08%), Postives = 207/236 (87.71%), Query Frame = 0 Query: 1 MEQAQQEERVLLWLKKRGYTQVAKHYEEDQAHAAEGSTEDNEEGSESSAPAEGSAPADEHLLCKRIGEANQNALLFRSIQLADPTLYHQSYNELQTWTCNALEAYKPELLTVAFPVFVHSYLKLVEHGMVEAARIFFQTWGPDHAEAYQMELRSLGAVQRPDQLTAGNGFVKRALTDKLVLRLCSTSYRLLQGFLSDHNLLSIMEILNERVQVVIEERGPRPRFEVVTFRDDGVAG 237 ME AQQEERVL WLKKRGYT+VAKHYEEDQAHAA GS E+ E +SS P+ A DE LLCKRIGEANQ+ALLFRS++++DP LYH++YNELQTWTCNALEAYKPELLTVAFPVFVHSYLKLVE GM+EAAR F QTWGPDHAE YQ+ELRSL AVQRPD LTAGNGFVKRALTDK VLRLCS SYRLLQ FLSDHNLL IMEILNE+V VV+EER P PRF+VVTFR+DG+AG Sbjct: 1 MEDAQQEERVLHWLKKRGYTEVAKHYEEDQAHAAVGSAEEGNESEDSSVPS--GAFTDERLLCKRIGEANQSALLFRSLRMSDPMLYHRNYNELQTWTCNALEAYKPELLTVAFPVFVHSYLKLVERGMIEAARAFLQTWGPDHAETYQLELRSLTAVQRPDHLTAGNGFVKRALTDKFVLRLCSISYRLLQSFLSDHNLLLIMEILNEQVHVVVEERPPMPRFQVVTFRNDGIAG 234
BLAST of NO02G01710 vs. NCBI_GenBank
Match: XP_009036249.1 (hypothetical protein AURANDRAFT_63680 [Aureococcus anophagefferens] >EGB09129.1 hypothetical protein AURANDRAFT_63680 [Aureococcus anophagefferens]) HSP 1 Score: 164.9 bits (416), Expect = 8.400e-37 Identity = 159/586 (27.13%), Postives = 242/586 (41.30%), Query Frame = 0 Query: 86 LYHQSYNELQTWT-CNALEAYKPELLTVAFPVFVHSYLKLV--------EHGMVEAARIFFQTWGPDHAEAYQMELRSLGAVQRPDQLTAGNGFVKRALTDKLVLRLCSTSYRLLQGFLSDHNLLSIMEILNERVQVVIEERGPRPRFEVVTFRDDGVAGRGGR-----------GEGDGSPRKNGRYEMAHGFTVRW-RVYRQ---KDGDHRDDSSMPPFNASLVPKLHKLSSKYRQEAAIGTADPTRPTVLMGTLTNTYDGCIVARM-----TEDATQLAAGFHDRAVRVFRLAGQGPAGGEGGSSSVHASSGPLIMRGHSQPVYGLSWAPEQQHLLSASGDGTVRLWDV---------AASRNVCVYRAPTDVPVWDVAFSPV--GHFFASGSYDRVARVWSTNRTKPVRLLVGHYSDVSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAGAGGRGEHGEENGVIRIWEVASGREVALLSGHRGGINRLTYSHDGKVLASAGEDETVCTWDVHGDFASLTASL--PLTPQSRFSTKATRVMDVAFTKRNLLLACGPV 630 L+ SY W ALE+ + EL FPVF +L +V E G A+R F + WG HA+ + E+ +L V P + A + + R + V+ L + LL FL+ +++++ NE+V + G +V D V G GS +G W Y + +DG R + PP A LV + D +PTVL + G AR+ + DAT+LA GF D ++R++R+ AG + GSS A++ L+ H +PVY L+W+ E ++LLS GDG LWD A+ +C Y A P W VA+ GH FA+G DR AR+++T+R P+R+ GH++DVS +G A G +G + +W++ SGR+++ HRG +S DG +A++G D ++ WD A+L A+ + P T + V DVA+T NL LA GP+ Sbjct: 16 LHVASYETFHRWVEGGALESVRCELSATLFPVFAQCFLVVVATEAEASGEDGGEPASRAFLERWGASHADRFAAEVEALRLVTSP-VVAAKDAYCARLRGGRWVVPLSGAAQALLGDFLTSTGNAAVLKVFNEKVTLDGTAPGRGEAAALVETSGDEVEXXXXXXXXXXXXXARLGVLLGSEALDGGAPAGRAPAPDWDDDYGRGLLRDGSRRPLAPPPP--AGLVGR------------GRAPLDALKPTVLDARVA----GADAARLSCCAASRDATRLAGGFADASLRLWRV--DELAGDDAGSSDAEAATTALV--AHDRPVYALAWSSESRYLLSGGGDGCCVLWDADAPGRGGPGASGAPLCSYAAHV-APCWSVAWCAASGGHVFATGGGDRTARLFATDRADPLRVFAGHWADVSAVCFHANAHYVLSASHDKTCRLWDVRAAGGPGRRCARVLDGAAGALAACDACPSGRKAAAAG----LDGGLHLWDLDSGRKLSSTKAHRGPAYVAKFSADGAAVATSGRDRSLKVWDA----AALAAAAGDDVAPAHAVETTDSPVFDVAWTPGNLCLASGPL 569
BLAST of NO02G01710 vs. NCBI_GenBank
Match: CCI43779.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 161.4 bits (407), Expect = 9.300e-36 Identity = 133/556 (23.92%), Postives = 212/556 (38.13%), Query Frame = 0 Query: 72 NALLFRSIQLADPTLYHQSYNELQTWTCNALEAYKPELLTVAFPVFVHSYLKLVEHGMVEAARIFFQTWGPDHAEAYQMELRSLGAVQRPDQLTAGNGFVKRALTDKLVLRLCSTSYRLLQGFLSDHNLLSIMEILNERVQVVIEERGPRPRFEVVTFRDDGVAGRG---------GRGEGD----------------------GSPRKNGRYEMAH------GF----------TVRWRVYRQ--------------------------------------KDGDHRDDSSMP---------------------------------------------------------------PFNASLVPKL-------HKLSSKYRQEAAIGTADPTRPTVLMGTLTNTYDGCIVARMTEDATQLAAGFHDRAVRVFRLAGQ---GPAGGEGGSSSVHASSGPLIMRGHSQPVYGLSWAPEQQHLLSASGDGTVRLWDVAASRNVCVYRAPTDVPVWDVAFSPVGHFFASGSYDRVARVWSTNRTKPVRLLVGHYSDVSC 470 N LLF ++ ++P Y +SY +L W CN+L+ K EL +AFP+FVHSYL+L+ G + AR FF DH +Q E+R L + + + L + ++ + + ++L S++LL F+ + ++ ILN R+Q+ + P + + + D + G G+ E G P G Y M++ G+ + W V + + D+ D + P PF A ++ KL K++ + + P+ L T N DA + A D + RV+R Q P G ++ + + I+RGHS VYG S++P+ + L++S D T+RLW +AA NV VYR+ + PVWDV + G++FAS S DR AR+WST+ P+R+ GH SDV C Sbjct: 116 NHLLFHGLEGSNPYRYEESYRKLMEWICNSLDMLKYELHGIAFPLFVHSYLELMMKGFEKEARGFFIRHAKDHFRLHQEEIRMLSLISKVEHLKKSE-YAQQRMHSRFHIQLSMLSFQLLNAFVKQEQMFLLLSILNTRIQLSVTSFHPGLQIQQLNDTDASLIGSNLVDPVIWDQGKNEQKRSLSEHVADDIFLQARSNESEIGIPTTQGEYSMSYLVQIAGGYGSHVGDLNVIPICWGVLPECKIPRLDNSDAIILDDENSANNTNVGGHNGVPGVPAAIQSNDNNDKKTAPLDISKSTSADDLDPTQAFSNEERTLDATAVESQRKSKRFKTENEASSTKNVLKEIGPLPDRKTPFFADIMEKLVLRELAETKVAVMEDLRSRVSLGKSNLPSSLCFTFLNASTHITNIAFNSDAALVGASCEDGSFRVWRNDNQPLGTPTGAVASRNTPNENELRAILRGHSNAVYGSSFSPDSRFALTSSADSTIRLWSLAARSNVVVYRSHSGYPVWDVEYGHYGYYFASCSMDRTARLWSTDHITPLRIYAGHLSDVDC 670
BLAST of NO02G01710 vs. NCBI_GenBank
Match: CCI43780.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 161.4 bits (407), Expect = 9.300e-36 Identity = 133/556 (23.92%), Postives = 212/556 (38.13%), Query Frame = 0 Query: 72 NALLFRSIQLADPTLYHQSYNELQTWTCNALEAYKPELLTVAFPVFVHSYLKLVEHGMVEAARIFFQTWGPDHAEAYQMELRSLGAVQRPDQLTAGNGFVKRALTDKLVLRLCSTSYRLLQGFLSDHNLLSIMEILNERVQVVIEERGPRPRFEVVTFRDDGVAGRG---------GRGEGD----------------------GSPRKNGRYEMAH------GF----------TVRWRVYRQ--------------------------------------KDGDHRDDSSMP---------------------------------------------------------------PFNASLVPKL-------HKLSSKYRQEAAIGTADPTRPTVLMGTLTNTYDGCIVARMTEDATQLAAGFHDRAVRVFRLAGQ---GPAGGEGGSSSVHASSGPLIMRGHSQPVYGLSWAPEQQHLLSASGDGTVRLWDVAASRNVCVYRAPTDVPVWDVAFSPVGHFFASGSYDRVARVWSTNRTKPVRLLVGHYSDVSC 470 N LLF ++ ++P Y +SY +L W CN+L+ K EL +AFP+FVHSYL+L+ G + AR FF DH +Q E+R L + + + L + ++ + + ++L S++LL F+ + ++ ILN R+Q+ + P + + + D + G G+ E G P G Y M++ G+ + W V + + D+ D + P PF A ++ KL K++ + + P+ L T N DA + A D + RV+R Q P G ++ + + I+RGHS VYG S++P+ + L++S D T+RLW +AA NV VYR+ + PVWDV + G++FAS S DR AR+WST+ P+R+ GH SDV C Sbjct: 139 NHLLFHGLEGSNPYRYEESYRKLMEWICNSLDMLKYELHGIAFPLFVHSYLELMMKGFEKEARGFFIRHAKDHFRLHQEEIRMLSLISKVEHLKKSE-YAQQRMHSRFHIQLSMLSFQLLNAFVKQEQMFLLLSILNTRIQLSVTSFHPGLQIQQLNDTDASLIGSNLVDPVIWDQGKNEQKRSLSEHVADDIFLQARSNESEIGIPTTQGEYSMSYLVQIAGGYGSHVGDLNVIPICWGVLPECKIPRLDNSDAIILDDENSANNTNVGGHNGVPGVPAAIQSNDNNDKKTAPLDISKSTSADDLDPTQAFSNEERTLDATAVESQRKSKRFKTENEASSTKNVLKEIGPLPDRKTPFFADIMEKLVLRELAETKVAVMEDLRSRVSLGKSNLPSSLCFTFLNASTHITNIAFNSDAALVGASCEDGSFRVWRNDNQPLGTPTGAVASRNTPNENELRAILRGHSNAVYGSSFSPDSRFALTSSADSTIRLWSLAARSNVVVYRSHSGYPVWDVEYGHYGYYFASCSMDRTARLWSTDHITPLRIYAGHLSDVDC 693
BLAST of NO02G01710 vs. NCBI_GenBank
Match: CCI43781.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 161.4 bits (407), Expect = 9.300e-36 Identity = 133/556 (23.92%), Postives = 212/556 (38.13%), Query Frame = 0 Query: 72 NALLFRSIQLADPTLYHQSYNELQTWTCNALEAYKPELLTVAFPVFVHSYLKLVEHGMVEAARIFFQTWGPDHAEAYQMELRSLGAVQRPDQLTAGNGFVKRALTDKLVLRLCSTSYRLLQGFLSDHNLLSIMEILNERVQVVIEERGPRPRFEVVTFRDDGVAGRG---------GRGEGD----------------------GSPRKNGRYEMAH------GF----------TVRWRVYRQ--------------------------------------KDGDHRDDSSMP---------------------------------------------------------------PFNASLVPKL-------HKLSSKYRQEAAIGTADPTRPTVLMGTLTNTYDGCIVARMTEDATQLAAGFHDRAVRVFRLAGQ---GPAGGEGGSSSVHASSGPLIMRGHSQPVYGLSWAPEQQHLLSASGDGTVRLWDVAASRNVCVYRAPTDVPVWDVAFSPVGHFFASGSYDRVARVWSTNRTKPVRLLVGHYSDVSC 470 N LLF ++ ++P Y +SY +L W CN+L+ K EL +AFP+FVHSYL+L+ G + AR FF DH +Q E+R L + + + L + ++ + + ++L S++LL F+ + ++ ILN R+Q+ + P + + + D + G G+ E G P G Y M++ G+ + W V + + D+ D + P PF A ++ KL K++ + + P+ L T N DA + A D + RV+R Q P G ++ + + I+RGHS VYG S++P+ + L++S D T+RLW +AA NV VYR+ + PVWDV + G++FAS S DR AR+WST+ P+R+ GH SDV C Sbjct: 91 NHLLFHGLEGSNPYRYEESYRKLMEWICNSLDMLKYELHGIAFPLFVHSYLELMMKGFEKEARGFFIRHAKDHFRLHQEEIRMLSLISKVEHLKKSE-YAQQRMHSRFHIQLSMLSFQLLNAFVKQEQMFLLLSILNTRIQLSVTSFHPGLQIQQLNDTDASLIGSNLVDPVIWDQGKNEQKRSLSEHVADDIFLQARSNESEIGIPTTQGEYSMSYLVQIAGGYGSHVGDLNVIPICWGVLPECKIPRLDNSDAIILDDENSANNTNVGGHNGVPGVPAAIQSNDNNDKKTAPLDISKSTSADDLDPTQAFSNEERTLDATAVESQRKSKRFKTENEASSTKNVLKEIGPLPDRKTPFFADIMEKLVLRELAETKVAVMEDLRSRVSLGKSNLPSSLCFTFLNASTHITNIAFNSDAALVGASCEDGSFRVWRNDNQPLGTPTGAVASRNTPNENELRAILRGHSNAVYGSSFSPDSRFALTSSADSTIRLWSLAARSNVVVYRSHSGYPVWDVEYGHYGYYFASCSMDRTARLWSTDHITPLRIYAGHLSDVDC 645
BLAST of NO02G01710 vs. NCBI_GenBank
Match: CCI43782.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 161.4 bits (407), Expect = 9.300e-36 Identity = 133/556 (23.92%), Postives = 212/556 (38.13%), Query Frame = 0 Query: 72 NALLFRSIQLADPTLYHQSYNELQTWTCNALEAYKPELLTVAFPVFVHSYLKLVEHGMVEAARIFFQTWGPDHAEAYQMELRSLGAVQRPDQLTAGNGFVKRALTDKLVLRLCSTSYRLLQGFLSDHNLLSIMEILNERVQVVIEERGPRPRFEVVTFRDDGVAGRG---------GRGEGD----------------------GSPRKNGRYEMAH------GF----------TVRWRVYRQ--------------------------------------KDGDHRDDSSMP---------------------------------------------------------------PFNASLVPKL-------HKLSSKYRQEAAIGTADPTRPTVLMGTLTNTYDGCIVARMTEDATQLAAGFHDRAVRVFRLAGQ---GPAGGEGGSSSVHASSGPLIMRGHSQPVYGLSWAPEQQHLLSASGDGTVRLWDVAASRNVCVYRAPTDVPVWDVAFSPVGHFFASGSYDRVARVWSTNRTKPVRLLVGHYSDVSC 470 N LLF ++ ++P Y +SY +L W CN+L+ K EL +AFP+FVHSYL+L+ G + AR FF DH +Q E+R L + + + L + ++ + + ++L S++LL F+ + ++ ILN R+Q+ + P + + + D + G G+ E G P G Y M++ G+ + W V + + D+ D + P PF A ++ KL K++ + + P+ L T N DA + A D + RV+R Q P G ++ + + I+RGHS VYG S++P+ + L++S D T+RLW +AA NV VYR+ + PVWDV + G++FAS S DR AR+WST+ P+R+ GH SDV C Sbjct: 118 NHLLFHGLEGSNPYRYEESYRKLMEWICNSLDMLKYELHGIAFPLFVHSYLELMMKGFEKEARGFFIRHAKDHFRLHQEEIRMLSLISKVEHLKKSE-YAQQRMHSRFHIQLSMLSFQLLNAFVKQEQMFLLLSILNTRIQLSVTSFHPGLQIQQLNDTDASLIGSNLVDPVIWDQGKNEQKRSLSEHVADDIFLQARSNESEIGIPTTQGEYSMSYLVQIAGGYGSHVGDLNVIPICWGVLPECKIPRLDNSDAIILDDENSANNTNVGGHNGVPGVPAAIQSNDNNDKKTAPLDISKSTSADDLDPTQAFSNEERTLDATAVESQRKSKRFKTENEASSTKNVLKEIGPLPDRKTPFFADIMEKLVLRELAETKVAVMEDLRSRVSLGKSNLPSSLCFTFLNASTHITNIAFNSDAALVGASCEDGSFRVWRNDNQPLGTPTGAVASRNTPNENELRAILRGHSNAVYGSSFSPDSRFALTSSADSTIRLWSLAARSNVVVYRSHSGYPVWDVEYGHYGYYFASCSMDRTARLWSTDHITPLRIYAGHLSDVDC 672
BLAST of NO02G01710 vs. NCBI_GenBank
Match: PRW57875.1 (transcription initiation factor TFIID subunit 5 [Chlorella sorokiniana]) HSP 1 Score: 160.6 bits (405), Expect = 1.600e-35 Identity = 144/515 (27.96%), Postives = 222/515 (43.11%), Query Frame = 0 Query: 1 MEQAQQEERVLLWLKKRGYTQVAKHYEEDQAHAAEGSTEDNEEGSESSAPAEGSAPADEHLLCKRIGEANQNALLFRSIQLADPTLYHQSYNELQTWTCNALEAYKPELLTVAFPVFVHSYLKLVEHGMVEAARIFFQTWGPDHAEAYQMELRSLGAVQRPDQLT-----------AGNGFVKRALTDKLVLRLCSTSYRLLQGFLSDHNLLSIMEILNERVQVVIEERGPRPRFEVVTFRDDGVAGRGGRGEGDGSPRKNGRYEMAHGFTVRWRVYRQKDGDHRDDSSMPPFNASL--------------------------------VPKLHKLSSKYRQE---AAIGTADPTRPTVLMGTLTNTYDGCIVARMTEDATQLAAGFHDRAVRVFRLAGQGPAGGEGGSSSVHASSGPLIMRGHSQPVYGLSWAPEQQHLLSASGDGTVRLWDVAASRNVCVYRAPTDVPVWDVAFSP--VGHFFASGSYDRVARVWSTNRTKPVRLLVGHYSDV 468 + A + VL +L+KR + + K E + AA G A + L R GE + LLF + DP Q+++ W N+L+ YKPEL V FP F H+YL LV G A+ QT +H + + M++ + G+ R LT A + + +RLC SY LL L L ++ ++NE ++ + + P E+ +D AG + + +++ ++ G +V R +QK + + ++ +L +P + + Y + + + P+ T NT T DA+ +A GF D +VR++ L + AGG G + + GHS PVYGL ++P+ + L SASGDGTVRLW N+ VYR +PVWDV+ P +FAS DR AR+WST+RT+P+RL VGH SDV Sbjct: 5 LRDADVDRLVLQYLRKRNFKEAEKVLELEIKEAA----------------PTGEMIA-QQWLGGRGGEGVEEGLLFATAGEGDPAGLVQAFDRFAAWVDNSLDLYKPELARVLFPAFAHTYLNLVAMG----AQAEAQTLMGEHRQRF-MDIAAGGSTSRIQALTDLAGISSEEAIAASRTAAALRGQRFAIRLCRASYELLAQHLQLPKQLVMLGVVNEHIKFEVHDGAPATLAELAEVEEDLTAG-AMQADVVTINQRSLELQLLQG-SVEDRYAQQKAEEAEEVANQKAQAEALTXXXXXXXXXXXXXXXXXXXXXXXXXXXXKFPLPAPAESAEDYLMKELAQRVPLSAEALPSCAFFTFFNTAQSLNCVAFTSDASIVAGGFADSSVRLYDLQARAAAGGAGDWVTYFS--------GHSGPVYGLDFSPDNELLFSASGDGTVRLWSREVQANLSVYRGHM-LPVWDVSACPYFAPFYFASCGADRTARMWSTDRTQPLRLFVGHTSDV 486
BLAST of NO02G01710 vs. NCBI_GenBank
Match: CCA25505.1 (transcription initiation factor TFIID subunit putati [Albugo laibachii Nc14]) HSP 1 Score: 159.5 bits (402), Expect = 3.500e-35 Identity = 134/556 (24.10%), Postives = 210/556 (37.77%), Query Frame = 0 Query: 72 NALLFRSIQLADPTLYHQSYNELQTWTCNALEAYKPELLTVAFPVFVHSYLKLVEHGMVEAARIFFQTWGPDHAEAYQMELRSLGAVQRPDQLTAGNGFVKRALTDKLVLRLCSTSYRLLQGFLSDHNLLSIMEILNERVQVVIEERGPRPRFEVVTFRDDG--------------------------------------------------------VAGRGGRG---------------------------------------------------------EGDGSPRKNGRYEMAHGFTV-----------------------RWRVYRQKDGDHRDDSS------------MPPFNASLVPKL-------HKLSSKYRQEAAIGTADPTRPTVLMGTLTNTYDGCIVARMTEDATQLAAGFHDRAVRVFRLAGQ---GPAGGEGGSSSVHASSGPLIMRGHSQPVYGLSWAPEQQHLLSASGDGTVRLWDVAASRNVCVYRAPTDVPVWDVAFSPVGHFFASGSYDRVARVWSTNRTKPVRLLVGHYSDVSC 470 N LLF ++ +DP Y +SY +L W CN+L+ K EL +AFP+FVHSYL+L+ G + AR FF DH +Q E+R L + + + L + ++ + ++ ++L S++LL F+ + ++ ILN R+Q+ + + P + + + D V GG G GD + +KN +++ T + R K G+ ++S PF A ++ KL K + + + P+ L T NT DA + A D + RV+R Q P G + + + I RGHS VYG S++P+ + L++S D T+RLW +AA NV VYR+ + PVWDV + G++FAS S DR AR+WST+ P+R+ GH SDV C Sbjct: 136 NHLLFHGLEASDPYRYEESYGKLMEWICNSLDMLKYELHGIAFPLFVHSYLELILKGFEKEARGFFIRHAKDHFRLHQEEIRILSLITKAEHLKRSE-YAQQVIQNRFHIQLSMLSFQLLNAFVKQEQMFLLLSILNTRIQLSVTKFHPGLQIQQLNDADASSVSSKRLESTMSNQITSESERSLPEHVADEIFDQAKLNDSEIGVQITQGEYNMSYLVQAAGGYGSLIEDLNMIPICWGVLPDRKLPSQENLESSVMEDESFTNTSKGGGHNGAPSVPTTIQSGDSNEKKNAPLDISKAATTDDMDPTQGFSNGERSSDTMAIDSNRKSKRFKLGNEGNNSKSLLQEVGPLPDRKSPFFADILEKLVLRELPETKAAVLEDLRVRVSLGKSSLPSSLCFTFLNTSTHITNIAFNGDAALVGASCEDGSFRVWRNDNQPLGTPTGTIDSRNKPNDNELRAIFRGHSNAVYGSSFSPDSRFALTSSADSTIRLWSLAAQSNVVVYRSHSGYPVWDVEYGHFGYYFASCSMDRTARLWSTDHITPLRIYAGHLSDVEC 690
BLAST of NO02G01710 vs. NCBI_GenBank
Match: PDM75675.1 (apb-3 [Pristionchus pacificus]) HSP 1 Score: 151.0 bits (380), Expect = 1.300e-32 Identity = 149/632 (23.58%), Postives = 240/632 (37.97%), Query Frame = 0 Query: 10 VLLWLKKRGYTQVAKHYEEDQAHAAEGSTEDNEEGSESSAPAEGSAPADEHLLCKRIGEANQNALLFRSIQLADPTLYHQSYNELQTWTCNALEAYKPELLTVAFPVFVHSYLKLVEHGMVEAARIFFQTWGPDHAEAYQMELRSLGAVQRPDQLTAGNGFVKRALTDKLVLRLCSTSYRLLQGFLSDHNLLSIMEILNERVQVVIEERGPRPRFEVVTFRDDGVAGRGGRGEGDGSPRKNGRYEMAHGFTVRWRVYR--QKDGDHRDDSSMPPFNASLVPK--LHKLSSKYRQE-----------AAIGTADPTRPTVLMGTLTNTYDGCIVARMTEDATQLAAGFHDRAVRVFRLAGQGPAGGEGGSSSV----------------HASSGPLIMRGHSQPVYGLSWAPEQQHLLSASGDGTVRLWDVAASRNVCVYRAPTDVPVWDVAFSPVGHFFASGSYDRVARVWSTNRTKPVRLLVGHYSDVSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAGAGGRGEHGEENGVIRIWEVASGREVALLSGHRGGINRLTYSHDGKVLASAGEDETVCTWDVH------GDFASLTASLPLTPQSR 605 +L +L+K GYT + T E SS PA P++E + + + L T + + Y+ E + FPVF HSYLKL+ G A F +G AY+ E+R+L ++ Q A N V+ + K ++++C +S + L+ L + L SI IL ER ++ IE ++ + G+ G+ G+++M HG +Y + R+D+ NA + + L LS RQE IG P P+V T N + G ++ED++ LA GF D + VF L G+ + + S+G + GHS P+Y ++++P+++ L S SGD T+RLW + N V R P+W +AF G+++A+ S A VW+T+R P+R+ S VS G ++ +R+W+V SG V +GHR + +S G+ + S D WD+ GD + +P SR Sbjct: 243 MLGFLRKYGYTDTEE-------------TLARESAIRSSGPASNQLPSNEAVAAE--------------------------FATLLTHVDASFDFYQAEFSLLIFPVFAHSYLKLLIDGQPNLAFSFMDKYGLRVPSAYEEEVRTLASLTNVAQALA-NPIVQNLMKKKFLVKICKSSMKQLEPLL--NRLPSISNILKERAEIEIE------------WQMGAIVGQVGK----------GKHKMYHGMMKEECIYALDRMKSRQREDAKRREMNAPVADRIPLPPLSECLRQERLRAMKDSHKMCVIGQDQP--PSVCFYTTLNGHGGVSSCDVSEDSSYLALGFGDSGISVFALNEDKKMRKMKGADDLDKLDTESDDIMEEMVENESAGVVTFNGHSAPIYSINFSPDKRILASTSGDNTIRLWSMQTQTNAVVIRVA--APIWQIAFCQRGYYYATASSSHTAAVWTTDRMHPLRIFADPLSHVSSVDFHANCNYIVG---------------------------------------------------GSDDRYVRVWDVLSGACVRTFTGHRAPVRCTKFSPCGRYVVSVDGDGVTLVWDLSSQRLMGGDTRTFPTRIPSLSWSR 755 The following BLAST results are available for this feature:
BLAST of NO02G01710 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G01710 ID=NO02G01710|Name=NO02G01710|organism=Nannochloropsis oceanica|type=gene|length=2193bpback to top protein sequence of NO02G01710.1 >NO02G01710.1-protein ID=NO02G01710.1-protein|Name=NO02G01710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=632bpback to top Synonyms
Publications
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