NO02G01650, NO02G01650 (gene) Nannochloropsis oceanica

Overview
NameNO02G01650
Unique NameNO02G01650
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4301
Alignment locationchr2:484557..488857 -

Link to JBrowse

Properties
Property NameValue
DescriptionPleckstrin like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:484557..488857 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001849PH_domain
Homology
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BLAST of NO02G01650 vs. NCBI_GenBank
Match: EWM30477.1 (Pleckstrin like protein [Nannochloropsis gaditana])

HSP 1 Score: 193.4 bits (490), Expect = 4.600e-45
Identity = 291/1102 (26.41%), Postives = 407/1102 (36.93%), Query Frame = 0 
Query:   12 LKEGWLVKQTTRRHLFTRQLMWHRRYFVLE---GGEARLSWYTTQPHTLSSNSIKKKTKPKKPNDSLALEPICSVGIHEDDNGVFELWVPAKDRTYVLRAEPPEGRTEWIEALCAAMMSSTATTS----TRQPSLALLPLVMGSEAEAIGDAKAGSETGGIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKLSLLTVLPDINGSPSSDERLSTP---HVPEVASEVATTVTXXXXXXXXXXXXXXXXRSLPTPPPHDATPLCPRPSSPTIITSSMPIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVLEQRLVREKEGLLGQIAHINQEKEALLERVASAEEQLSSERLKLTKLGFVTKAEDIEKXXXXXXXEEELRHLRKEAQSMEETKSTILVKLQRMLGVEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMLGCEGGQRAEEKMRERLEGWEVQEAEWLGEIKLLQQALIEQTERAEAQQREM------EHAAATATIVAAGTADFASNATSAAVAETGEDDKGGLVLSPTSCSSSPPTSDTTIARDAVLEKEVRRLERALAAQTALFHQAQRDAAELREANYGIQNLRLVQXXXXXXXXXXXXXXXXXXXXEGLTALVGQIATLLSQLEQQSHISLEEVGGGVE-GGKGGGETLFASFSFLSDCDNSSDGLFIQ---PEELVPHEDLSEWAHMDDEGXXXXXXXXXXXXXXXXXXXXXXXXQQLALRAMEIAETLTRKSTEFEMELERVRREKLFYEAKAMYAVQHCMRLREMTQAVSAKAAGFVAHAEVLLQATEIED-NSGSSRMRSNEGSKISKGSIG------GVGMKQHELDEGRKMPVAGSDAEVLLALQATKGALEEALREQYEAHALLENELISEEVVGV-IDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPMPNHAILYEEESRLKAQRRKLXXXXXXXXALSTQLSHQKRSIDEQMIMLTEEVAYSRRCLAQRKAELRAA 1086
            LKEGWL +QT RRHL++R  +W RRYF+LE      A+LSW++ QP    S S+   T+ ++   ++AL+  CSV I   D  +FEL V AK+RT +LR E    + EW  AL  A+M+  A+      T      ++   +G   EA  +        G+                                 L    P I  + S    LS P     P +++E   T                   S+P   P+                  +                                  +TV+ ++  RE E L   +    ++++ L+E+VA+ E QLS+E  +LT+LGFV KA D+E        E  L  LR++  ++EE K  +  KLQ M G                                                        +LGC  G R E+K++ERLE W+ Q AEW  E   L++    Q +R  A  +E        H     +  A  +  FA++ T    A++GE       +S    SSS  T+    AR+A LE+E+  L  ALA  T +  +AQ+ AAELRE + G+Q L   Q                         L G++   LS +       L E+   ++ GG      L       + C ++      Q   PEELV  EDLSE      +G                        ++L   A+ +A  L RK    E E+   RR   + +     A QHCMRLREMTQAVSAKA  FVAHAE LL               RS      S G  G      GVG  Q    EG  + +A SD E+L AL ATK  LE+                         IDS                                                                                                        P+P+ + L +EE RLK QRR+ XXXXXX  A+S QL+ Q+RSID+ M+ML+++VA SR+ L QRK EL+ A
Sbjct:   23 LKEGWLKQQTMRRHLWSRHPIWQRRYFILERQTSFMAQLSWFSCQPGDFLS-SLAAGTRKQRALGTVALDSTCSVDISAKDESIFELKVLAKERTLILRVEEMTEKEEWAGALHLAIMARKASKEPDMFTNHMPSNVMQQALGPNHEAEMENIPEESKEGVKETDTQNPLLTPEL-------------------LARKSPLIPSAESPLPLLSPPVNNEEPRISNEAPLTADGITGYLSPVSATSCPVDSVPPEAPYXXXXXXXXXXXXXXXXXXV----------------------------QQPSHTMTVIAEQ-TREIERLRNSVRTGEEKEKDLVEKVAALEGQLSTEHFQLTRLGFVKKAADVENAKRIAELESALSQLRRDTAAVEEAKRALSEKLQFMDG-------------------------------------------------EFHLVHRLLGCTSGDRVEKKLQERLESWDRQSAEWHQERLRLEEVCARQADRIRALGQEKAEAILDPHGPVDKSSAALESTTFAADTTQ---AKSGE-------MSGAHSSSSLKTN----AREAELEEELHGLRGALAETTRMLVEAQQQAAELRETSDGLQKLWWAQDHKGRKEDPEQGQEPFLP-----RELCGRVGGTLSTMAHDLVAILGELEARLQKGGCLSASPLVFDEGAPTCCSSTESETSRQSFPPEELVAREDLSE-----IDGRQGESHLHEPSTSVCTQTSELEPFERLTHNALHLATVLARKVAIAEAEMTTPRRRSWWPDRPTPLA-QHCMRLREMTQAVSAKATAFVAHAEALLSTRNSPSLQRAPDHTRSTGSGTSSDGRTGIQTGADGVGRGQSPEGEGFGVCLA-SDTEILRALHATKAELEDTXXXXXXXXXXXXXXXXXXXXXXAWIDS----------------------------------KPGTMPAATTEWLTGSSYHPCPSPSPNPLSAPPSEGHATNRRGKNEGEKQQPLDHEESHPNRSASFPHYYPIPDASSLRDEEKRLKTQRRRXXXXXXXMEAVSAQLAMQRRSIDDCMLMLSDQVAISRKSLDQRKKELQTA 966
The following BLAST results are available for this feature:
BLAST of NO02G01650 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 1
Match NameE-valueIdentityDescription
EWM30477.14.600e-4526.41Pleckstrin like protein [Nannochloropsis gaditana][more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR033ncniR033Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR002ngnoR002Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006787NSK006787Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G01650.1NO02G01650.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|573993gene_745Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100013g38gene171Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G01650.1NO02G01650.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G01650 ID=NO02G01650|Name=NO02G01650|organism=Nannochloropsis oceanica|type=gene|length=4301bp
ATGCAAGCAACCCCTACCACCCCCACCGCGCCCCTCAAGGAGGGTTGGCT
TGTCAAGCAAACCACGCGCCGCCACCTCTTTACCCGGCAGCTTATGTGGC
ATCGCCGCTATTTCGTCTTGGAGGGCGGGGAGGCGCGCTTAAGCTGGTAT
ACTACCCAGCCTCACACCTTGTCATCTAACTCGATCAAGAAGAAAACAAA
ACCCAAAAAGCCGAACGATTCCCTGGCCTTGGAGCCGATCTGCAGCGTTG
GCATTCACGAGGACGATAATGGCGTGTTCGAATTGTGGGTACCAGCCAAG
GACCGGACTTACGTTTTGCGGGCGGAGCCCCCTGAGGGACGAACTGAGTG
GATAGAAGCCTTGTGTGCTGCCATGATGTCGAGTACAGCCACCACCTCAA
CGCGCCAGCCCTCCCTCGCACTTCTACCCCTCGTGATGGGCAGCGAAGCT
GAAGCAATCGGAGACGCGAAGGCAGGGTCGGAAACGGGAGGTATAGCAGA
GGATAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAATTGAGGC
AGGAGGGAGGCGTGGTGGTTACTCCAGACGACTTCAAGCTATCTCTGCTG
ACAGTGTTACCGGATATCAATGGCAGCCCTTCAAGTGACGAGAGGCTTTC
TACTCCCCACGTGCCAGAGGTTGCATCAGAGGTGGCGACAACCGTGACAG
CCAACCTGGAGACGACAACGACGACGGTGACGACAGCACCATCAGAACGC
AGCCTGCCCACGCCCCCACCTCATGACGCGACACCTCTCTGTCCACGACC
ATCGTCTCCAACCATCATCACCTCATCAATGCCCATAGCCCCTCGTTCAT
CCGTTGCACCTTCCTCCTCTTCATCTTTCCCCTCCTCTTCCTCCTCATCC
CCCTGTTCCCCCTCCCCCCGATCCCCTGCCCCTTTGACCGTGCTTGAGCA
GCGACTCGTGCGAGAGAAAGAAGGCTTGCTTGGACAGATTGCACATATAA
ACCAAGAAAAGGAAGCTTTGCTCGAACGAGTGGCTTCAGCGGAAGAGCAG
CTGTCCTCGGAACGCTTAAAACTGACCAAATTGGGGTTCGTTACAAAGGC
GGAAGACATTGAGAAGGTGCGGAAGATCAGGAAGTTTGAAGAGGAACTGA
GACATCTAAGAAAGGAGGCTCAGAGCATGGAGGAGACTAAATCTACAATT
CTTGTAAAATTACAGCGTATGCTGGGGGTGGAGCAGGCGACGAAGGAGGA
GAACGTGAGAAAGGGACGGAGGATCAATGAACTAGAGGGGGAAATAAGGC
ATTTCAAAACAGAGGCGCAAGCATCGAAGGAAGAAAAAGACGCAGTGGCG
GAGACGTTGCAGCAGGTGCAGGCGGAGATGCAAGCAATGCGGGATATGTT
AGGCTGTGAGGGGGGGCAAAGGGCTGAAGAGAAAATGCGAGAGCGGTTGG
AGGGGTGGGAGGTGCAGGAGGCGGAGTGGTTAGGGGAGATCAAGCTATTG
CAGCAGGCGTTGATCGAACAGACGGAGCGTGCGGAGGCCCAGCAGCGGGA
AATGGAGCATGCGGCTGCTACTGCCACGATTGTGGCTGCTGGTACAGCTG
ATTTCGCTTCTAATGCTACCAGTGCTGCTGTGGCCGAGACGGGCGAAGAT
GACAAAGGGGGTCTTGTCCTCTCCCCCACCTCCTGCTCCTCGTCGCCCCC
CACCTCTGACACCACCATCGCGCGAGATGCAGTCCTGGAGAAAGAAGTTC
GAAGATTGGAAAGGGCGCTGGCTGCTCAGACTGCCTTATTCCACCAGGCG
CAACGTGACGCCGCGGAGCTGCGAGAGGCAAACTATGGCATTCAGAACCT
GCGGTTGGTACAGCAGCAGAAGCAGAAGCAGCCGCAGCAGCCGCAGCAAC
AGCAGCAACAGCAGCTGAAGGGCGAGGGGCTGACGGCGCTGGTGGGCCAA
ATCGCTACCCTTCTCAGTCAACTCGAGCAGCAATCTCATATTTCCTTAGA
AGAAGTAGGAGGAGGAGTAGAAGGGGGAAAAGGAGGTGGAGAGACACTTT
TCGCTTCCTTTTCGTTCCTCTCGGACTGCGACAACAGCAGTGATGGCCTC
TTTATTCAGCCTGAGGAGCTGGTCCCGCATGAGGATCTAAGTGAATGGGC
GCATATGGATGATGAAGGAGAGGGAGCAGCAGCAGCTGCAGCGAGAACAG
CAGCTGCAGAGGAGTATGAAAATCGCAGGCAACTAATCGTGCAGCAGCTT
GCATTGAGGGCCATGGAAATCGCGGAGACTCTGACGAGGAAATCGACAGA
GTTTGAGATGGAGCTAGAGAGGGTGAGGAGAGAGAAACTCTTTTATGAGG
CCAAAGCCATGTATGCCGTCCAGCATTGCATGCGGTTGAGGGAGATGACA
CAGGCAGTAAGTGCCAAGGCTGCTGGGTTTGTGGCGCACGCGGAGGTGCT
CTTACAAGCGACCGAGATCGAGGATAATAGTGGCAGCAGCCGTATGCGAA
GCAACGAGGGAAGCAAGATTAGCAAAGGCAGCATCGGCGGTGTTGGAATG
AAGCAGCACGAGTTGGACGAAGGGAGGAAAATGCCCGTGGCTGGCTCGGA
TGCCGAGGTTCTCTTGGCTCTCCAAGCGACGAAGGGGGCATTGGAGGAGG
CGTTGCGGGAGCAATACGAGGCTCACGCCTTGCTCGAAAACGAACTTATT
AGCGAAGAAGTCGTCGGAGTCATTGACAGCAGCAGCAATAGCAGCAACAG
CAATAGTAGGAATAGAAGCAGAGGCCTTTTTGAGAATACTGCGACGCTCA
CGGCCCGTACCCACCCTGCTTCTGCTCCAATTCGTGTCACTGAACCCCTC
CCCACCATCACTTCCACCAGCAGTGACAGCACCGTGCCCCGCCACCAACA
GCTAGGCCAGCAGCAGCAGCAGGAGCAGCAGCAGGAGCAGGAGCAGGAGC
AGGAGCAGGAGCAGCAGACGCAATGGCAAGACCATTCTCCACCCACCTCC
CTCTCTCCATCCCTTTCTCGCCCTAATCCGCACCCGTACTACCCTATGCC
CAACCACGCAATCCTGTACGAGGAAGAAAGCCGCCTGAAAGCCCAACGAC
GAAAATTGAGAGAGGAACGCCGGCGAATGGAGGCGCTCAGCACGCAGCTC
TCCCATCAAAAACGGAGCATCGACGAACAAATGATAATGCTAACTGAAGA
GGTCGCCTATTCACGCAGGTGTCTGGCGCAACGTAAGGCTGAGCTACGAG
CCGCTCCTGAGACCAAAACAAAAAGGAGCAGCAGCAGCAGCAACAGTAGC
AGCAACAGTAGCAGCAGCAGTAGCAGCAGCAACACTACTGGACACATTCC
CACCTCGGAAAGAACCCAACGAGTACACTCGCCCCATTTGTCATTTAGTC
CTTCTCCGTCTTCTTCTCCCACTCATGTTGTTGTTGCCGTTGATGCTGCT
ACAGCTGCCGCTGTTTCCACACCGGCAAACCCTCCTCCGGTCCCTGCTAC
TTCCTTGTCGTTGCTTAAAAGGAAAGCTAGGGCAACCAAGGGAGTGAAGA
CCGTCGATAAATTACAAGAGCAGGAGAGGGACATGGAACTGTTGGCGATT
TACAAACAGCAGCATCAACAACAGCAAAAGCAGCAGCAGCTGCAGCAGCG
GGAGAAGTGGCGAGGGGATGACTGGACGGAGACCACGGCCATCAAGACTC
AGCCCGAGAGCCCGCCTTCCTTTTCGAGTCGTCTGTACGCCGCCGCCACC
AACGTCAACAACATAAGCATCAACAGCAACAGCAGCAGTCAATTCAGTAC
CAAGAGCAGCAGTCCTAGTTCGCGGTCCTTACTCAAAAGAGGCGCCAAAC
GCAAGTCCAGCACCGTCCGCAGCCCGGAGCTGGAGAAGCCCTTGGTTGGT
AAAACAGACATGATCCGGTTTGCGAATGAGCTTAACCGGTTGCAGCAGCG
CTTGAATGAGGAGCGGTCTATGGTCTCGGGCCACGCTTCGCGGACATCGC
CCTGAATTCGGGAATGGAGAAAGTGGAGGGAGGGAGGGAGGGAGGATAAG
GACGGTGATAGATGTAGAGACCAAACTGGATGAAAAGGGCACTGACAGTG
ACAAGGGAGGGAACTACTCTCCTACGGAGCAGATCACGCGGCCCGACACA
TGCCCTCAAAGAAAGAATGGTATATGAATGAAAGAGGTGGTAATCGTCCT
CTTTCCCCTCAACATAATCTGGTTTCCTGCTTTGTCCCAGACAAAAAAGG
GTGCTTTGTGAATGCGACGACGTCCTTTTCCCCAGGTTCAGAAGGGAGGT
T
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protein sequence of NO02G01650.1

>NO02G01650.1-protein ID=NO02G01650.1-protein|Name=NO02G01650.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1335bp
MQATPTTPTAPLKEGWLVKQTTRRHLFTRQLMWHRRYFVLEGGEARLSWY
TTQPHTLSSNSIKKKTKPKKPNDSLALEPICSVGIHEDDNGVFELWVPAK
DRTYVLRAEPPEGRTEWIEALCAAMMSSTATTSTRQPSLALLPLVMGSEA
EAIGDAKAGSETGGIAEDKEEEEEEEEEEEELRQEGGVVVTPDDFKLSLL
TVLPDINGSPSSDERLSTPHVPEVASEVATTVTANLETTTTTVTTAPSER
SLPTPPPHDATPLCPRPSSPTIITSSMPIAPRSSVAPSSSSSFPSSSSSS
PCSPSPRSPAPLTVLEQRLVREKEGLLGQIAHINQEKEALLERVASAEEQ
LSSERLKLTKLGFVTKAEDIEKVRKIRKFEEELRHLRKEAQSMEETKSTI
LVKLQRMLGVEQATKEENVRKGRRINELEGEIRHFKTEAQASKEEKDAVA
ETLQQVQAEMQAMRDMLGCEGGQRAEEKMRERLEGWEVQEAEWLGEIKLL
QQALIEQTERAEAQQREMEHAAATATIVAAGTADFASNATSAAVAETGED
DKGGLVLSPTSCSSSPPTSDTTIARDAVLEKEVRRLERALAAQTALFHQA
QRDAAELREANYGIQNLRLVQQQKQKQPQQPQQQQQQQLKGEGLTALVGQ
IATLLSQLEQQSHISLEEVGGGVEGGKGGGETLFASFSFLSDCDNSSDGL
FIQPEELVPHEDLSEWAHMDDEGEGAAAAAARTAAAEEYENRRQLIVQQL
ALRAMEIAETLTRKSTEFEMELERVRREKLFYEAKAMYAVQHCMRLREMT
QAVSAKAAGFVAHAEVLLQATEIEDNSGSSRMRSNEGSKISKGSIGGVGM
KQHELDEGRKMPVAGSDAEVLLALQATKGALEEALREQYEAHALLENELI
SEEVVGVIDSSSNSSNSNSRNRSRGLFENTATLTARTHPASAPIRVTEPL
PTITSTSSDSTVPRHQQLGQQQQQEQQQEQEQEQEQEQQTQWQDHSPPTS
LSPSLSRPNPHPYYPMPNHAILYEEESRLKAQRRKLREERRRMEALSTQL
SHQKRSIDEQMIMLTEEVAYSRRCLAQRKAELRAAPETKTKRSSSSSNSS
SNSSSSSSSSNTTGHIPTSERTQRVHSPHLSFSPSPSSSPTHVVVAVDAA
TAAAVSTPANPPPVPATSLSLLKRKARATKGVKTVDKLQEQERDMELLAI
YKQQHQQQQKQQQLQQREKWRGDDWTETTAIKTQPESPPSFSSRLYAAAT
NVNNISINSNSSSQFSTKSSSPSSRSLLKRGAKRKSSTVRSPELEKPLVG
KTDMIRFANELNRLQQRLNEERSMVSGHASRTSP*
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Synonyms
Publications