NO02G01570, NO02G01570 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO02G01570 vs. NCBI_GenBank
Match: EWM30545.1 (hypothetical protein Naga_100013g48 [Nannochloropsis gaditana]) HSP 1 Score: 193.0 bits (489), Expect = 7.700e-46 Identity = 104/167 (62.28%), Postives = 132/167 (79.04%), Query Frame = 0 Query: 5 STSSSICLLLGLLLVSV-QGFFFTPTRLSLGMTQLSSLPAAATVVPGRLPLS-LLYMSQTMNEEPLILTEENAAMVLQQAREELSTMFGYLDENKAVGITGEVDLVAVEGISIIVRLRNRFWHDKRMVLARVSKYMTDRIPEAMVEIEDERQLEGDDAKSVSDFYKH 170 ST++S+ L+LG +L +V + F P R S +T + P A ++V + L+ ++MS + +EPLILTEENAA+VL+ AR+EL TMFGY EN+AVGITGEVDLVAVEGISIIVRL+NRFWHD++MVL R+SK++TDRIPEAMVEIED QL+GDDAKSVSDFY H Sbjct: 53 STTTSLFLVLGAMLCAVTKSFIPVPARASRSVTYFPAKPTAISLVGSTMRLTPYMFMSTSNFDEPLILTEENAALVLEAARQELGTMFGYTKENQAVGITGEVDLVAVEGISIIVRLKNRFWHDRKMVLTRISKFITDRIPEAMVEIEDVEQLKGDDAKSVSDFYAH 219
BLAST of NO02G01570 vs. NCBI_GenBank
Match: CBJ26822.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 104.0 bits (258), Expect = 4.700e-19 Identity = 55/98 (56.12%), Postives = 69/98 (70.41%), Query Frame = 0 Query: 63 MNEEPLILTEENAAMVLQQAREELSTMFGYLDENKAVGITGEVDLVAVEGISIIVRLRNRFWHDKRMVLARVSKYMTDRIPEAM-VEIEDERQLEGDD 160 M +E LILTEEN VL +A+ ELST+FG EN AVGITG+ + V ++G S++VRL RFWH+K VLARV ++ RIPE + VEIED QLE D Sbjct: 1 MAQETLILTEENVVAVLAEAKRELSTLFGNNAENTAVGITGDCEFVCLDGPSVVVRLTGRFWHEKTTVLARVGNFVQTRIPECVDVEIEDPSQLEDAD 98
BLAST of NO02G01570 vs. NCBI_GenBank
Match: CEM30550.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 95.5 bits (236), Expect = 1.700e-16 Identity = 56/142 (39.44%), Postives = 83/142 (58.45%), Query Frame = 0 Query: 20 SVQGFFFTPTRLSLGMTQLSSLPAAATVVPGRLPLSLLYMS----QTMNEEPLILTEENAAMVLQQAREELSTMFGYLDENKAVGITGEVDLVAVEGISIIVRLRNRFWHDKRMVLARVSKYMTDRIPEAM-VEIEDERQLE 157 + F +P+ L + AA+V P R PL L + E+ LILTEEN L+ R+ELS +FG +EN++VGITG+V+ ++G +I+RL+ RFWH + VL RV+ ++ +RIPE + VEIED L+ Sbjct: 24 TASAFTLSPSLLPSPLHTXXXXXXAASVHPFRPPLLRLRPPLPPLRAAQEDQLILTEENVEKTLEACRQELSALFGNSEENRSVGITGDVEFAGLDGPLVILRLKGRFWHSRATVLERVTAFLLNRIPECLGVEIEDPAMLD 165
BLAST of NO02G01570 vs. NCBI_GenBank
Match: OLP88774.1 (Catalase-peroxidase 1 [Symbiodinium microadriaticum]) HSP 1 Score: 92.4 bits (228), Expect = 1.400e-15 Identity = 62/154 (40.26%), Postives = 83/154 (53.90%), Query Frame = 0 Query: 17 LLVSVQGFF-FTPTRLSLGMTQLSSLPAAATVVPGRLPLSLLYMSQTMNEEPLILTEENAAMVLQQAR-EELSTMFGYLDENKAVGITGEVDLVAVEGISIIVRLRNRFWHDKRMVLARVSKYMTDRIPE-AMVEIEDERQLEGDDAKSVSDFY 168 LLV + F F P+ Q S++P A VPG P+ + PL L+EEN +VLQ+AR + FGY++E+ GITG+VDLV VEG +I+ L FWH + VL RV KY+ RIPE A V++ED L + FY Sbjct: 312 LLVKLATFVAFVPSASFTSHRQRSTIPMRA--VPGAEPIGI----------PLTLSEENVEVVLQEARYHHMQNCFGYVEESTGAGITGKVDLVEVEGPMVIIHLYGAFWHKREDVLRRVKKYLIQRIPEIADVDVEDPDDLVDEGRDRSGTFY 453
BLAST of NO02G01570 vs. NCBI_GenBank
Match: GAX18882.1 (hypothetical protein FisN_8Hu097 [Fistulifera solaris]) HSP 1 Score: 91.7 bits (226), Expect = 2.400e-15 Identity = 47/92 (51.09%), Postives = 65/92 (70.65%), Query Frame = 0 Query: 68 LILTEENAAMVLQQAREELSTMFGYLDENKAVGITGEVDLVAVEGISIIVRLRNRFWHDKRMVLARVSKYMTDRIPEAM-VEIEDERQLEGD 159 L L+EEN VL R+E+ T+FGY EN+ VGITG VDLV ++G +II+RL+ RFWH+++ VL RV+ Y+ RIPE + V +ED QL + Sbjct: 101 LELSEENVLGVLAACRQEVGTLFGYTAENRGVGITGGVDLVDLDGPTIILRLKGRFWHERKTVLERVANYLQQRIPEIIDVIVEDPWQLTNE 192
BLAST of NO02G01570 vs. NCBI_GenBank
Match: XP_005758674.1 (hypothetical protein EMIHUDRAFT_249978 [Emiliania huxleyi CCMP1516] >EOD06245.1 hypothetical protein EMIHUDRAFT_249978 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 91.3 bits (225), Expect = 3.200e-15 Identity = 46/90 (51.11%), Postives = 62/90 (68.89%), Query Frame = 0 Query: 68 LILTEENAAMVLQQAREELSTMFGYLDENKAVGITGEVDLVAVEGISIIVRLRNRFWHDKRMVLARVSKYMTDRIPEAM-VEIEDERQLE 157 L+LTEEN VL +A +L TMFG E+ AVGITG DLV ++G ++++RL RFWH + VL R+ ++ +RIPE + VEIED QLE Sbjct: 54 LVLTEENVQAVLDEAERDLGTMFGSNPESAAVGITGRADLVELDGPTVVIRLSGRFWHARARVLERLEAFVLERIPECIGVEIEDPSQLE 143
BLAST of NO02G01570 vs. NCBI_GenBank
Match: XP_005833481.1 (hypothetical protein GUITHDRAFT_152388 [Guillardia theta CCMP2712] >EKX46501.1 hypothetical protein GUITHDRAFT_152388 [Guillardia theta CCMP2712]) HSP 1 Score: 90.1 bits (222), Expect = 7.000e-15 Identity = 47/95 (49.47%), Postives = 64/95 (67.37%), Query Frame = 0 Query: 63 MNEEPLILTEENAAMVLQQAREELSTMFGYLDENKAVGITGEVDLVAVEGISIIVRLRNRFWHDKRMVLARVSKYMTDRIPEAM-VEIEDERQLE 157 M++EPL LTE+N L++++E L TMFG EN+ +GITG+V LV ++G VRL RFWH + VLARV Y+ R+PE + V IED QL+ Sbjct: 66 MDKEPLDLTEDNVQQALEESKEILGTMFGNSQENREIGITGDVQLVNLDGPFASVRLVGRFWHKRSDVLARVENYVKTRVPEIVEVSIEDPMQLD 160
BLAST of NO02G01570 vs. NCBI_GenBank
Match: KOO32279.1 (hypothetical protein Ctob_010676 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 90.1 bits (222), Expect = 7.000e-15 Identity = 48/91 (52.75%), Postives = 61/91 (67.03%), Query Frame = 0 Query: 67 PLILTEENAAMVLQQAREELSTMFGYLDENKAVGITGEVDLVAVEGISIIVRLRNRFWHDKRMVLARVSKYMTDRIPEAM-VEIEDERQLE 157 P LTEENA VLQ+ E+L T+FG E+ AVGITG D V +EG +++ L RFWH + MV+ RV KY+ DRIPE + VEI D QL+ Sbjct: 7 PRELTEENARAVLQECMEDLGTLFGSNAESLAVGITGAADFVDLEGPILVISLSGRFWHQRSMVVERVKKYVMDRIPECVDVEIVDVAQLD 97
BLAST of NO02G01570 vs. NCBI_GenBank
Match: EJK62113.1 (hypothetical protein THAOC_17288 [Thalassiosira oceanica]) HSP 1 Score: 89.7 bits (221), Expect = 9.200e-15 Identity = 50/96 (52.08%), Postives = 64/96 (66.67%), Query Frame = 0 Query: 68 LILTEENAAMVLQQAREELSTMFGYLDENKAVGITGEVDLVAVEGISIIVRLRNRFWHDKRMVLARVSKYMTDRIPEAM-VEIEDERQL--EGDDA 161 L L EE VL R+E+ TMFGY EN+ VGITG VD V ++G ++IV L+ RFWH + VL+RVS Y+ RIPE + V +EDE QL E +DA Sbjct: 117 LALDEETVQGVLAACRQEIGTMFGYQAENRGVGITGGVDFVDLDGPTVIVSLKGRFWHQRPTVLSRVSSYLIARIPEIVEVIVEDEYQLTDEANDA 212
BLAST of NO02G01570 vs. NCBI_GenBank
Match: XP_005792548.1 (hypothetical protein EMIHUDRAFT_222964 [Emiliania huxleyi CCMP1516] >EOD40119.1 hypothetical protein EMIHUDRAFT_222964 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 89.7 bits (221), Expect = 9.200e-15 Identity = 45/90 (50.00%), Postives = 62/90 (68.89%), Query Frame = 0 Query: 68 LILTEENAAMVLQQAREELSTMFGYLDENKAVGITGEVDLVAVEGISIIVRLRNRFWHDKRMVLARVSKYMTDRIPEAM-VEIEDERQLE 157 L+LTEEN VL +A +L TMFG E+ AVGITG +LV ++G ++++RL RFWH + VL R+ ++ +RIPE + VEIED QLE Sbjct: 54 LVLTEENVQAVLDEAERDLGTMFGSNPESAAVGITGRAELVELDGPTVVIRLSGRFWHARARVLERLEAFVLERIPECIGVEIEDPSQLE 143 The following BLAST results are available for this feature:
BLAST of NO02G01570 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G01570 ID=NO02G01570|Name=NO02G01570|organism=Nannochloropsis oceanica|type=gene|length=885bpback to top protein sequence of NO02G01570.1 >NO02G01570.1-protein ID=NO02G01570.1-protein|Name=NO02G01570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=170bpback to top Synonyms
Publications
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