NO02G01560, NO02G01560 (gene) Nannochloropsis oceanica

Overview
NameNO02G01560
Unique NameNO02G01560
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2062
Alignment locationchr2:461888..463949 -

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Properties
Property NameValue
DescriptionShort-chain dehydrogenase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:461888..463949 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR002347Glc/ribitol_DH
Homology
BLAST of NO02G01560 vs. NCBI_GenBank
Match: EWM30471.1 (short-chain dehydrogenase [Nannochloropsis gaditana])

HSP 1 Score: 479.6 bits (1233), Expect = 9.000e-132
Identity = 242/354 (68.36%), Postives = 297/354 (83.90%), Query Frame = 0
Query:    2 KLPGLGSWQAIGAGVVAASLFAGPLREIYLYVPPLTAAVAGFSVLPHGGLAQRVILATMGGMSASAFGYHQSRRKLPACPLLPPGEKELALVTGASSGIGREISLELAKKGFGLVLVARRADKLNELAADIQMTSEPTLQNKIPVHIVSADLTKPDAAQHLFNTVVLEKGLRVTALINNAGLGHTESFINMSISKIEEIIHLNTLALTTLTRLFGSEMAKRGRGRIMSVSSIAGAAPGPLVAVYSATKAFVTSFTLAIQHELEPLGVSITNLVPGATFTEFQGRAEAHAAMAFSMPGLAMSADRVARAGVKGMLRGDSIVIPGVVNQGFVLATAIFPAKLMRMVTQMAWSEMPM 356
            K+ G GSWQA+GAG++A SL AGP R+I LYVPP+TA + G++ LPHGGL QR++L TMG +SA AFG+H  RR+ P CP L  GE+ELAL+TGASSGIGREISLELA++GFG++LVARRADKL ELA+DI+       +  +P+HIV ADL+ P+AA+ ++ +VV EKGL+V+AL+NNAG+G+T+SF+ M  +KIEEI+HLN L+LT L  LFG EMA RGRGRIM VSSIAGAAPGPLVAVYSA+KAFV+SFTLAIQHELEP GVS+TNL+PGATFTEFQ RA A AA AFS+PGLAM ADRVAR GV GMLRGDS+V+PG+VNQ FVLATA+ P KL+R+VT +AWSE+P+
Sbjct:    5 KIAGPGSWQALGAGLLAISLVAGPSRQIQLYVPPVTALLCGYAALPHGGLGQRIVLGTMGALSAGAFGFHHLRRRHPICPALSQGEEELALITGASSGIGREISLELARRGFGVILVARRADKLQELASDIRALLADR-KRMVPIHIVPADLSCPEAARRVYESVVREKGLQVSALVNNAGVGYTDSFLKMPTAKIEEIVHLNALSLTQLCWLFGQEMASRGRGRIMCVSSIAGAAPGPLVAVYSASKAFVSSFTLAIQHELEPGGVSVTNLLPGATFTEFQARAHAQAAAAFSVPGLAMPADRVAREGVTGMLRGDSVVVPGLVNQAFVLATAVLPPKLLRLVTSLAWSEVPI 357          
BLAST of NO02G01560 vs. NCBI_GenBank
Match: WP_107137008.1 (SDR family NAD(P)-dependent oxidoreductase [Deinococcus sp. OD32] >PTA69149.1 short-chain dehydrogenase [Deinococcus sp. OD32])

HSP 1 Score: 184.1 bits (466), Expect = 7.800e-43
Identity = 117/251 (46.61%), Postives = 154/251 (61.35%), Query Frame = 0
Query:   90 LALVTGASSGIGREISLELAKKGFGLVLVARRADKLNELAADIQMTSEPTLQNKIPVHIVSADLTKPDAAQHLFNTVVLEKGLRVTALINNAGLGHTESFINMSISKIEEIIHLNTLALTTLTRLFGSEMAKRGRGRIMSVSSIAGAAPGPLVAVYSATKAFVTSFTLAIQHELEPLGVSITNLVPGATFTEFQGRAEAHAAMAFSMP-GLAM-SADRVARAGVKGMLRGDSIVIPGVVNQGFVLATAIFP 339
            LALVTGASSGIG  ++  LA  G  LVLVAR A +L  LA ++Q       Q+ I VH++ ADL +P AA HL N  +  +GL    L+NNAGLG  + F++ +   I  +I LN  ALT LTRL    M  +GRGRI++V+S A   PGPL+A Y A+KA+V S + A+  EL P GVS+T L PG   T FQ  +    +     P  LAM SA++VARAG+  MLRG ++VIPG +NQ  + A  + P
Sbjct:    7 LALVTGASSGIGEHLARGLAAHGAHLVLVARSAGRLQALAQELQQ------QHGIQVHVLPADLAQPGAAAHLTNE-LRARGLHPDILVNNAGLGTFDEFLHQTPEAISGLIALNITALTELTRLLAPHMVAQGRGRILNVASTAAFQPGPLMAAYYASKAYVLSLSEALNEELRPSGVSVTALCPGPVETGFQAASGLGRSQLLRGPVRLAMLSAEQVARAGLDAMLRGQAVVIPGRINQLQIAALRLLP 250          
BLAST of NO02G01560 vs. NCBI_GenBank
Match: GBD87949.1 (D-beta-hydroxybutyrate dehydrogenase [bacterium BMS3Abin03])

HSP 1 Score: 178.3 bits (451), Expect = 4.300e-41
Identity = 104/251 (41.43%), Postives = 156/251 (62.15%), Query Frame = 0
Query:   91 ALVTGASSGIGREISLELAKKGFGLVLVARRADKLNELAADIQMTSEPTLQNKIPVHIVSADLTKPDAAQHLFNTVVLEKGLRVTALINNAGLGHTESFINMSISKIEEIIHLNTLALTTLTRLFGSEMAKRGRGRIMSVSSIAGAAPGPLVAVYSATKAFVTSFTLAIQHELEPLGVSITNLVPGATFTEFQGRAEAHAAMAFSMPGLAMSADRVARAGVKGMLRGDSIVIPGVVNQGFVLATAIFPAKL 342
            AL+TGASSGIG E++   AK G+ LVLVAR   KLN      Q+ SE + ++ I V ++  DL+KP AA+ +FN V  E  + +  L+NNAG G    + N    K +E++ +N ++L  LT LF  +M KRG G+I++V+S A   PGP++A Y A+K+FV S++ AI  EL+  GV ++ L PG T TEFQ RA       F    L M+A++VA+ G KG+++G  ++I G+ N+   +++   PAK+
Sbjct:    6 ALITGASSGIGYELAKIFAKDGYNLVLVARNEQKLN------QLKSELSGKHNITVKVLPKDLSKPHAAEEIFNEVKNE-SISIDVLVNNAGFGIFNDYWNTDYKKEQEMLQVNIMSLARLTNLFAKDMIKRGDGKILNVASTAAFQPGPMMAGYYASKSFVLSYSQAINFELKKRGVQVSTLCPGPTITEFQTRAGMGNINLFK-KSLTMTAEQVAKIGYKGLMKGKPVIIAGITNKIGAMSSKWSPAKI 248          
BLAST of NO02G01560 vs. NCBI_GenBank
Match: WP_105482872.1 (SDR family NAD(P)-dependent oxidoreductase [Abditibacterium utsteinense] >PQV64803.1 hypothetical protein B1R32_10370 [Abditibacterium utsteinense])

HSP 1 Score: 177.9 bits (450), Expect = 5.600e-41
Identity = 112/264 (42.42%), Postives = 154/264 (58.33%), Query Frame = 0
Query:   91 ALVTGASSGIGREISLELAKKGFGLVLVARRADKLNELAADIQMTSEPTLQNKIPVHIVSADLTKPDAAQHLFNTVVLEKGLRVTALINNAGLGHTESFINMSISKIEEIIHLNTLALTTLTRLFGSEMAKRGRGRIMSVSSIAGAAPGPLVAVYSATKAFVTSFTLAIQHELEPLGVSITNLVPGATFTEFQGRAEAHAAMAFSMPGLAMSADRVARAGVKGMLRGDSIVIPGVVNQGFVLATAIFPAKLMRMVTQMAWSEMP 355
            AL+TGASSGIG E++ ELA++ + L+LVARR DKL EL        E  L+  + V ++  DL K  AAQ LF+ +   +G  +  LINNAG      F     +KI  ++ +N +ALT +T LF   M  RGRG+I+ V+SIAG  PGPL++VY A+KA+V SF+ A+ +E+E  GVS+T L PGAT +EFQ RA    +    M    MSA  VAR G+    RG+ I IPG+ N+  V    + P   M    +     +P
Sbjct:    4 ALITGASSGIGYEMAKELARQSYDLILVARREDKLREL--------EKLLEKHVGVTVIVLDLAKEGAAQTLFDAL---RGRPIDLLINNAGFADYALFAESGFAKISAMMQVNMIALTQITHLFLPPMIARGRGQILQVASIAGFFPGPLMSVYYASKAYVLSFSEALANEVEGSGVSVTCLCPGATISEFQERARMKESKL--MDAAYMSAKTVARRGIAAAQRGNGICIPGLFNRFLVQVPRLVPRGAMTRFMRRIQDRIP 254          
BLAST of NO02G01560 vs. NCBI_GenBank
Match: WP_051686360.1 (SDR family oxidoreductase [Chryseobacterium hispalense])

HSP 1 Score: 176.8 bits (447), Expect = 1.200e-40
Identity = 113/259 (43.63%), Postives = 156/259 (60.23%), Query Frame = 0
Query:   88 KELALVTGASSGIGREISLELAKKGFGLVLVARRADKLNELAADIQMTSEPTLQNKIPVHIVSADLTKPDAAQHLFNTVVLEKGLRVTALINNAGLGHTESFINMSISKIEEIIHLNTLALTTLTRLFGSEMAKRGRGRIMSVSSIAGAAPGPLVAVYSATKAFVTSFTLAIQHELEPLGVSITNLVPGATFTEFQGRAEAHA-AMAFSMPGLAMSADRVARAGVKGMLRGDSIVIPGVVNQGFVLATAIFPAKLMRMV 346
            KE  L+TGASSGIG+E+S +LA KG  L+LVAR  DKL  L   +Q       Q K  +  +  DL++P+AAQ ++N  V   G ++T LINNAG G   +F++MS+ K EE+I +N  AL  LT+LFG++M K G+G+IM+++S+    P P  +VYSATK+FV +FT  +  EL+  GV+IT L PG   T F   A     AM+ + P   M AD VA+AGVK  L+G+     G +N        I P KLM  +
Sbjct:    2 KEYTLITGASSGIGKEMSRQLAAKGINLILVARSEDKLQNLQQKLQE------QYKTDIKYLLYDLSEPNAAQDIYNH-VKNVGYKITGLINNAGFGDYGNFVDMSLKKDEEMIAVNITALVGLTKLFGADMVKTGKGKIMNIASLLSFLPFPYYSVYSATKSFVLAFTETVAAELQGTGVNITALCPGTVETPFHTDAMRKTNAMSANKP---MPADVVAKAGVKLFLKGNGKKTVGAMNWFLSNIPRITPDKLMMKI 250          
BLAST of NO02G01560 vs. NCBI_GenBank
Match: WP_075342438.1 (SDR family NAD(P)-dependent oxidoreductase [Tenacibaculum agarivorans])

HSP 1 Score: 175.6 bits (444), Expect = 2.800e-40
Identity = 113/254 (44.49%), Postives = 154/254 (60.63%), Query Frame = 0
Query:   90 LALVTGASSGIGREISLELAKKGFGLVLVARRADKLNELAADIQMTSEPTLQNKIPVHIVSADLTKPDAAQHLFNTVVLEKGLRVTALINNAGLGHTESFINMSISKIEEIIHLNTLALTTLTRLFGSEMAKRGRGRIMSVSSIAGAAPGPLVAVYSATKAFVTSFTLAIQHELEPLGVSITNLVPGATFTEFQGRAEAHAAMAFSMPGLAMSADRVARAGVKGMLRGDSIVIPGVV-NQGFVLATAIFPAKLM 343
            +AL+TGASSG+G+E +L  A++   +++VARR +KL EL ++I+ T          V I+  DLTKP+AAQ +++ V  E  + V  LINNAG G    F   ++++   +I+LN +ALTTLTRLF  +   R +G+I++VSS A   PGPL AVY ATKA+VTSF+ AI  EL    V++TNL+PGAT TEF   +       F  P    SA  VA AG KGML G   VI G+  +Q  +L    F  K M
Sbjct:    4 VALITGASSGLGKEFALLHAERNGDVIIVARRENKLQELKSEIESTYH------TQVKIIVKDLTKPNAAQEIYDEVSKE-NITVNFLINNAGFGGVGKFHERALAQDITMINLNVIALTTLTRLFSPDFVNRNQGKILNVSSTASLLPGPLQAVYYATKAYVTSFSNAIAQELSDTNVTVTNLMPGATATEFGSTSGMDKTNLFDKPA---SARSVAEAGYKGMLSGKLDVISGLTFSQSLLLKMLPFTPKKM 247          
BLAST of NO02G01560 vs. NCBI_GenBank
Match: WP_002612515.1 (SDR family NAD(P)-dependent oxidoreductase [Stigmatella aurantiaca] >EAU67950.1 short-chain dehydrogenase [Stigmatella aurantiaca DW4/3-1] >ADO75788.1 Short-chain dehydrogenase [Stigmatella aurantiaca DW4/3-1])

HSP 1 Score: 174.9 bits (442), Expect = 4.700e-40
Identity = 101/258 (39.15%), Postives = 153/258 (59.30%), Query Frame = 0
Query:   88 KELALVTGASSGIGREISLELAKKGFGLVLVARRADKLNELAADIQMTSEPTLQNKIPVHIVSADLTKPDAAQHLFNTVVLEKGLRVTALINNAGLGHTESFINMSISKIEEIIHLNTLALTTLTRLFGSEMAKRGRGRIMSVSSIAGAAPGPLVAVYSATKAFVTSFTLAIQHELEPLGVSITNLVPGATFTEFQGRAEAHAAMAFSMPGLAMSADRVARAGVKGMLRGDSIVIPGVVNQGFVLATAIFPAKLMRMV 346
            +++ALVTGAS+G+G + +   A+ G  L+LVAR   +L  LAA ++        + I  H+++ADL++P+A + LF   V  +GL V  L+NNAG G    F+   + +  E++ +N  +L  LT LF   M +RG GRI++++S AG  PGP +A Y ATKAFV SF+ A+ HEL+  GV++T   PGAT TEF  RA+   +  F  PG+A + D VA  G   M++G  + I G++N    +     P  L+R +
Sbjct:    3 RKVALVTGASAGLGEQFAQRFAQDGHDLILVARTTSRLETLAARLEQA------HGIKAHVLTADLSRPEAPERLFED-VRARGLTVEYLVNNAGFGSAGPFLEQPLEREAEMVEVNCTSLLKLTHLFARTMRERGSGRILNIASTAGFQPGPYMATYYATKAFVLSFSEALAHELKGTGVTVTCYCPGATHTEFAARAQVEKSRLFQRPGVATAPD-VAADGYAAMMKGRVLSIHGLLNWIGTMGVRFGPRALVRSI 252          
BLAST of NO02G01560 vs. NCBI_GenBank
Match: WP_103312574.1 (SDR family NAD(P)-dependent oxidoreductase [Deinococcus sp. SJW1-2] >PNY82140.1 short-chain dehydrogenase [Deinococcus sp. SJW1-2])

HSP 1 Score: 174.5 bits (441), Expect = 6.200e-40
Identity = 106/254 (41.73%), Postives = 150/254 (59.06%), Query Frame = 0
Query:   91 ALVTGASSGIGREISLELAKKGFGLVLVARRADKLNELAADIQMTSEPTLQNKIPVHIVSADLTKPDAAQHLFNTVVLEKGLRVTALINNAGLGHTESFINMSISKIEEIIHLNTLALTTLTRLFGSEMAKRGRGRIMSVSSIAGAAPGPLVAVYSATKAFVTSFTLAIQHELEPLGVSITNLVPGATFTEFQGRAEAHAAMAFSMPG--LAMSADRVARAGVKGMLRGDSIVIPGVVNQGFVLATAIFPAKLM 343
            AL+TGAS GIG EI+ +LA +G  L+LVAR  DKL  LA ++      + Q+ +  H+++ DLT+P+A   L    +  +GL+V  L+NNAG G    F      +I  +I +N  ALT LTR F   M +RGRGR+++V+S A   PGP++AVY ATKA+V SF+ A+  EL   GV ++ L PG   T FQ  A+ + +   S P     +SA +VA+ GV  MLRG ++ + G +NQ  VLA    P   M
Sbjct:   10 ALITGASGGIGEEIARQLAARGAHLILVARSEDKLQALAQEL------SAQHGVQSHVIALDLTRPEAGAEL-EREIAARGLQVDILVNNAGFGGFSEFWEQDAGEIGRMIAVNIAALTDLTRRFLPGMVQRGRGRVLNVASTAAFMPGPMMAVYYATKAYVLSFSEAVNEELRGRGVGVSALCPGPVETGFQAAADLNQSKLLSGPNRVAMLSAAQVAQIGVDAMLRGQAVAVAGRINQLQVLAPRFLPRAAM 256          
BLAST of NO02G01560 vs. NCBI_GenBank
Match: WP_063557159.1 (SDR family NAD(P)-dependent oxidoreductase [Clostridium ljungdahlii] >OAA82863.1 putative oxidoreductase [Clostridium ljungdahlii])

HSP 1 Score: 172.9 bits (437), Expect = 1.800e-39
Identity = 105/260 (40.38%), Postives = 156/260 (60.00%), Query Frame = 0
Query:   88 KELALVTGASSGIGREISLELAKKGFGLVLVARRADKLNELAADIQMTSEPTLQNKIPVHIVSADLTKPDAAQHLFNTVVLEKGLRVTALINNAGLGHTESFINMSISKIEEIIHLNTLALTTLTRLFGSEMAKRGRGRIMSVSSIAGAAPGPLVAVYSATKAFVTSFTLAIQHELEPLGVSITNLVPGATFTEFQGRAEAHAAMAFSMPGLAMSADRVARAGVKGMLRGDSIVIPGVVNQGFVLATAIFPAKLMRMVTQ 348
            ++ AL+TGASSGIG E++   +K G+ LVLVAR   KL E+A ++        +  I VHI+  DL+K ++ + LF   V + G+RVT L+NNAG G+   F  + I K E+II LN  A+T LT+LF  EM K  +G I++V+S     PGP +AVY A+KA+V SF+ A+++EL+P G+ +  L PGAT T F   A             AMSA++ A    +G ++  S++IPG  N+  VL + + P K+  +V +
Sbjct:    6 EKTALITGASSGIGLELAKLFSKDGYNLVLVARSESKLAEIAENL------IKKYNINVHIIKEDLSKRESVKDLF-LKVQQLGIRVTTLVNNAGAGYCGLFHEIDIDKDEKIIGLNIEAITYLTKLFSKEMIKLKKGSILNVASTGSYEPGPYIAVYYASKAYVLSFSQALENELKPYGIKVCTLCPGATKTGFSKNAGKKDIKT------AMSAEKTAEIAYRGFMKNKSVIIPGSFNKIAVLFSKLLPGKISAVVVR 252          
BLAST of NO02G01560 vs. NCBI_GenBank
Match: WP_015346555.1 (SDR family NAD(P)-dependent oxidoreductase [Myxococcus stipitatus] >AGC42292.1 short chain dehydrogenase [Myxococcus stipitatus DSM 14675])

HSP 1 Score: 172.6 bits (436), Expect = 2.400e-39
Identity = 101/242 (41.74%), Postives = 150/242 (61.98%), Query Frame = 0
Query:   88 KELALVTGASSGIGREISLELAKKGFGLVLVARRADKLNELAADIQMTSEPTLQNKIPVHIVSADLTKPDAAQHLFNTVVLEKGLRVTALINNAGLGHTESFINMSISKIEEIIHLNTLALTTLTRLFGSEMAKRGRGRIMSVSSIAGAAPGPLVAVYSATKAFVTSFTLAIQHELEPLGVSITNLVPGATFTEFQGRAEAHAAMAFSMPGLAMSADRVARA-GVKGMLRGDSIVIPGVVNQ 329
            +++AL+TGAS+G+G + +   A+ G  ++LVAR A +L  LA+ ++       ++ +  H++  DL +P+AA+ LF   V E+GL V  L+NNAG G +  F++  + +  E++ LN  AL  LT LF   M +RG GR+++V+S AG  PGP +A Y ATKAFV S + A+ HEL+  GV++T   PGAT TEF  RA    +  F  PG+A +AD V  A GV  M+RG  + I G +NQ
Sbjct:    3 RKVALITGASAGLGEQFARRFARDGHDVILVARSAPRLEALASALEK------EHGVKAHVIPLDLGQPEAAEQLF-ARVSERGLEVEFLVNNAGFGSSGPFLDQDVKREAEMVALNCTALLKLTHLFARPMRERGHGRVLNVASTAGFQPGPYMATYYATKAFVVSLSEALAHELKGSGVTVTCHCPGATHTEFAQRAGTSKSRLFQRPGVASAADVVEHAYGV--MMRGRVLAIHGFLNQ 235          
The following BLAST results are available for this feature:
BLAST of NO02G01560 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30471.19.000e-13268.36short-chain dehydrogenase [Nannochloropsis gaditan... [more]
WP_107137008.17.800e-4346.61SDR family NAD(P)-dependent oxidoreductase [Deinoc... [more]
GBD87949.14.300e-4141.43D-beta-hydroxybutyrate dehydrogenase [bacterium BM... [more]
WP_105482872.15.600e-4142.42SDR family NAD(P)-dependent oxidoreductase [Abditi... [more]
WP_051686360.11.200e-4043.63SDR family oxidoreductase [Chryseobacterium hispal... [more]
WP_075342438.12.800e-4044.49SDR family NAD(P)-dependent oxidoreductase [Tenaci... [more]
WP_002612515.14.700e-4039.15SDR family NAD(P)-dependent oxidoreductase [Stigma... [more]
WP_103312574.16.200e-4041.73SDR family NAD(P)-dependent oxidoreductase [Deinoc... [more]
WP_063557159.11.800e-3940.38SDR family NAD(P)-dependent oxidoreductase [Clostr... [more]
WP_015346555.12.400e-3941.74SDR family NAD(P)-dependent oxidoreductase [Myxoco... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR033ncniR033Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006777NSK006777Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G01560.1NO02G01560.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|573951gene_736Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100013g49gene162Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G01560.1NO02G01560.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G01560 ID=NO02G01560|Name=NO02G01560|organism=Nannochloropsis oceanica|type=gene|length=2062bp
TCAGACACGTCTATCTAAACGCATCGATCCAAAAAATGAAGCTGCCGGGG
TTGGGTAGCTGGCAAGgtgcgtaagggttttcatttcagccttctccgca
tcatcgccatcgcctgcatggcatggcattcaatgcaacttgcttcttcc
atgcttgctttgatggtttttacatcggtccgctttgatctcggtgtaca
ctccttccccatacgacatcacagCTATCGGCGCTGGTGTGGTAGCCGCG
TCGTTGTTTGCCGGCCCACTGCGTGAAATTTACCTCTACGTCCCCCCTTT
AACGGCCGCCGTCGCAGGCTTTTCGGTCCTCCCACATGGCGGGCTGGCGC
AACGAGTCATACTGGCCACCATGGGCGGCATGAGCGCCAGCGCTTTTGGA
TATCATCAATCAAGACGAAAGCTTCCGGCTTGTCCGTTGCTGCCTCCTGG
CGAAAAAGAGCTGGCGTTAGTGACGGGGGCATCAAGCGGCATCGGGCGTG
AAATCAGTCTTGAGCTCGCCAAGAAAGGGTTCGGCCTTGTCCTTGTCGCT
CGCCGCGCCGACAAGCTTAATGAGTTAGCGGCAGACATTCAAATGACCAG
TGAACCGACTTTACAAAATAAAATACCCGTTCATATCGTGTCTGCAGACT
TGACCAAGCCTGACGCTGCCCAGCACCTATTCAATACAGTAGTACTCGAG
AAAGGACTGAGGGTCACTGCTCTCATCAATAACGCCGGCCTCGGACACAC
CGAATCTTTCATTAACATGTCCATCTCAAAAATTGAAGAGATTATTCATC
TGAACACCTTGGCTCTCACGACTCTTACACGTCTCTTCGGGTCAGAAATG
GCGAAGCGAGGCCGAGGACGCATCATGTCAGTCTCATCGATCGCAGGCGC
TGCTCCTGGCCCGCTCGTTGCCGTTTACAGCGCTACAAAGGCATTCGTCA
CTTCTTTTACATTGGCGATTCAACATGAACTGGAACCCTTGGGGGTATCA
ATCACGAATTTGGTCCCTGGGGCGACGTTTACGGAGTTTCAGGGGCGGGC
AGAAGCGCATGCAGCGATGGCGTTCTCGATGCCTGGCCTAGCGATGTCTG
CTGATCGAGTGGCACGGGCAGGGGTGAAAGGGATGCTACGAGGGGATAGT
ATCGTCATACCTGGAGTGGTGAATCAGGGCTTTGTATTAGCGACGGCAAT
ATTTCCCGCGAAGTTAATGAGGATGGTTACCCAGATGGCCTGGAGCGAGA
TGCCGATGTTGGGACGGAAGAAGGGAGGAATGGGAGGAGATGGGAGGAAG
TGATAGGTATGAAATCAAAAAGAGACATGGGGACAAAGTACGACGGTGCA
GTGGCAATCCTGAATTTTATTTATTGTTGTAACTTGTGGAATCTTCTCTT
TTCGTTTGGTTAATTTACTTCCATTTGTTGTTTTGATCTCTTGATTTGAA
AAGAACAATTTGGTAAGCATTCGGGCTCAAGCCATTCCTTCTTCAGAACC
TAGTCACATGATGTGTTTAACACCGAGAATCGTCTAAAGTCATCCCCTCC
TTCGCCTGTACTTCCTCTTCCACCACCCACCCGTGCCCGCCTCCACCCAC
CTTTCCATTGTCCTCCTTCCCTTCCTCTTCTTCTTCATCCCCCCTCTTCC
CACCCTTCCTCAACCTCCCCGAGTCCCACAAGCCCCTGATCTCCTTCCTC
AACAGATTCAATTTGACCGGCTTGGTAATAAACCCGTCCGCGCCCGCCAA
GGCACACTCCTGCTTCTCCCTATCCAGAACCAACGCCGAAACCACCACGA
TGGGCATGGAAGCCAACCGCGGATCACTGTGCCCCCTCAAGGTTTTCAAC
ACATCAATGCCATGCATATCAGGTAACTGCAAATCCAGCAGTATCAAATC
AAAACTCGGGTCAATTCCTGTCAGTGCCGCCGTCCCCGTCTCCACGAAGA
CCACCCGATGTCCATCCTGCTGCAACATCCCTCCCAACACGATCTGGTTC
ACCAATATGTCCTCCACAGACAAAATCTTCAACTCCCTCACCGGCGGAGC
CTCCCCCCCCGC
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protein sequence of NO02G01560.1

>NO02G01560.1-protein ID=NO02G01560.1-protein|Name=NO02G01560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=370bp
MKLPGLGSWQAIGAGVVAASLFAGPLREIYLYVPPLTAAVAGFSVLPHGG
LAQRVILATMGGMSASAFGYHQSRRKLPACPLLPPGEKELALVTGASSGI
GREISLELAKKGFGLVLVARRADKLNELAADIQMTSEPTLQNKIPVHIVS
ADLTKPDAAQHLFNTVVLEKGLRVTALINNAGLGHTESFINMSISKIEEI
IHLNTLALTTLTRLFGSEMAKRGRGRIMSVSSIAGAAPGPLVAVYSATKA
FVTSFTLAIQHELEPLGVSITNLVPGATFTEFQGRAEAHAAMAFSMPGLA
MSADRVARAGVKGMLRGDSIVIPGVVNQGFVLATAIFPAKLMRMVTQMAW
SEMPMLGRKKGGMGGDGRK*
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