NO02G01200, NO02G01200 (gene) Nannochloropsis oceanica

Overview
NameNO02G01200
Unique NameNO02G01200
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3356
Alignment locationchr2:367602..370957 -

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Properties
Property NameValue
DescriptionDual-specificity RNA methyltransferase RlmN
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:367602..370957 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008173RNA methyltransferase activity
GO:0003824catalytic activity
GO:0051536iron-sulfur cluster binding
GO:0003824catalytic activity
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR004383rRNA_lsu_MTrfase_RlmN/Cfr
IPR007197rSAM
Homology
BLAST of NO02G01200 vs. NCBI_GenBank
Match: EWM30490.1 (hypothetical protein Naga_100013g86 [Nannochloropsis gaditana])

HSP 1 Score: 520.0 bits (1338), Expect = 7.300e-144
Identity = 280/446 (62.78%), Postives = 334/446 (74.89%), Query Frame = 0
Query:    4 LMALLLLSSATAFLVKPRPSLSSGTACINRRRPLAT-------LATAAVPTSTSPAHSPVPSTLTILDGDRHLLSTRKQTLLELGTAGLEDVLRGKGRARMVWRAVREGLDPYQTDPDASLYDGRITRKTRNLLQERVQVPHWTVAETTRSPCGTVKLLIRLRDGLLVESVVIPS--------AEKTVNGKASAS-TVASRSTVCVSSQVGCAQACAFCLTGMMGFIRHLKADEILMQLQLALQVARKDGLPDVRNVVFMGMGEPLNNPHAVSQALQAMTDAHGFALSPNFVTVSTVAPSPAHIRRFLGMPKAKIAWSVHGATDVMRRALVPTTSATMVELREAFREVMAQRGDTDIFIECTLIDGVNDALADAEALVDFLRPFGRESVKVNLIPYNDTGVNGWKPSKWDTILNFQAYVRTQGGWPTFVRTPRGREESSACGQLAT 434
            L  ++LLSS+TAF           TA + +  P  T       L T A+ +S +  ++ V +++ +  G       +K+T+L+LGT GLE VL GKGRARMVWRAVREGLDP++TDP + ++D RIT +TR +LQERV  P WT+ + T S CGT+KLL+RL DGL+VE+VVIP+          + ++G+A  S  +ASRSTVCVSSQVGCAQACAFCLTG MGF+RHL  DEILMQ+QLALQ  R +GLP +RNVVFMGMGEPLNN  AV  AL  MTD H FALSP+F+T+STVAPSP H+R FL MPK ++AWSVHGA D +RR LVPTTS++MVELREAFREVMAQRGDT IFIE TLI+GVND+L DAEALV+ LRPFGR +VKVNLIPYNDTGVNGW PS    IL FQ YVRT GGW TF RTPRGREESSACGQLAT
Sbjct:   69 LSTVVLLSSSTAFT----------TAFVMKSVPPKTSVDLRPGLPTCAMVSSIAAENTLVKASMPLSTGP----IPQKETILKLGTDGLERVLEGKGRARMVWRAVREGLDPHETDPASPMFDSRITSRTRAILQERVLGPQWTLVQRTSSTCGTLKLLVRLHDGLMVETVVIPARLGPRSNGLARGMSGEAEDSLALASRSTVCVSSQVGCAQACAFCLTGTMGFVRHLSIDEILMQVQLALQKVRAEGLPGLRNVVFMGMGEPLNNHRAVRHALACMTDPHAFALSPSFITLSTVAPSPGHVRHFLDMPKIRLAWSVHGAADGLRRTLVPTTSSSMVELREAFREVMAQRGDTYIFIEVTLIEGVNDSLDDAEALVELLRPFGRTAVKVNLIPYNDTGVNGWMPSPPGNILAFQTYVRTHGGWLTFARTPRGREESSACGQLAT 500          
BLAST of NO02G01200 vs. NCBI_GenBank
Match: CBJ49163.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 304.7 bits (779), Expect = 4.800e-79
Identity = 173/357 (48.46%), Postives = 231/357 (64.71%), Query Frame = 0
Query:   77 LLELGTAGLEDVLRGKGRARMVWRAVREGLDPYQTDPDASLYDGRITRKTRNLLQERVQVPHWTVAETTRSPCGTVKLLIRLRDGLLVESVVIPSAEKTVNGKASASTVASRSTVCVSSQVGCAQACAFCLTGMMGFIRHLKADEILMQLQLALQVARKDGLPDVRNVVFMGMGEPLNNPHAVSQALQAMTDAHGFALSPNFVTVSTVAPSPAHIRRFLGMPKAKIAWSVHGATDVMRRALVPTTSATMVELREAFREVMAQRGDTDIFIECTLIDGVNDALADAEALVDFLRPFGRESVKVNLIPYNDTGVNGWKPSKWDTILNFQAYVRTQGGWPTFVRTPRGREESSACGQLAT 434
            LL L    L  +L G GRA+MVW A+  G+DP+    DA+ +   +T KT  +L++ V+   W V   + S CGT KLL++L DGL VE+VVIP                SRSTVCVSSQ+GCA+ C FC+TG MG +R+L A EIL Q+  A +  R+ G+P + N V+MGMGEPL+NP AV+Q+LQ +T    FA++ + ++VSTV PSPA IRR  GMP +++AWSVH ATD +RR LVPTT  +M ELR+AF EV+  R    +F+E  LI+G+ND+   A AL   LRP    +  +NL+PYNDTG   ++ S  +++  FQ  V TQ G+   +RT RG EESSACGQLAT
Sbjct:   64 LLSLNFDELSQILGGSGRAKMVWSALSAGVDPF---GDAAEF---LTDKTAAVLKDTVERLPWQVVRESVSSCGTRKLLVQLEDGLEVETVVIPDLS------------GSRSTVCVSSQIGCAKNCQFCMTGKMGLVRNLTAGEILGQVFFARETVREHGMPPLTNAVYMGMGEPLDNPGAVTQSLQVLTHPFAFAMAKSKISVSTVGPSPAAIRRMKGMP-SRLAWSVHAATDDVRRLLVPTTVHSMAELRDAFAEVLQSRRREHLFVEVVLIEGMNDSPELARALASLLRPLPIRA-GINLLPYNDTGHPFFRASPKESVEEFQR-VLTQEGFVATIRTARGDEESSACGQLAT 399          
BLAST of NO02G01200 vs. NCBI_GenBank
Match: CEM19671.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 283.1 bits (723), Expect = 1.500e-72
Identity = 175/393 (44.53%), Postives = 229/393 (58.27%), Query Frame = 0
Query:   55 PVPSTLTILDGDRHLLSTRKQTLLELGTAGLEDVLRGKGRARMVWRAVREGLDPYQTDPDASLYDGRITRKTRNLLQERVQVPHWTVAETTRSPCGTVKLLIRLRDGLLVESVVIPSAEKTVNGKASASTVASRSTVCVSSQVGCAQACAFCLTGMMGFIRHLKADEILMQLQLALQ-VARKDG-LPDVRNVVFMGMGEPLNNPHAVSQALQAMTDAHGFALSPNFVTVSTVAPSPAHIRRFLGMPKAKIAWSVHGATDVMRRALVPTTSATMVELREAFREVMAQRGD------------TDIFIECTLIDGVNDALADAEALVDFLRPFGRESVKVNLIPYNDTGVNGWKPSKWDTILNFQAYVRTQGGWPTFVRTPRGREESSACGQLAT 434
            P+ ST+ +      +L   +  LL L    L   + G GRAR +W A+R+G  P   D      +  ++ +    L E  Q+  + V   T S CGTVKLL+RLRDG  VE+V+IPS +               ST+CVSSQ+GCA+AC FC TG MG +R+L ADEIL Q+  A + V   DG  P +RN VFMGMGEPLNNP AV +A+Q MTD   F L  + +TVSTV PSPA IR    +P   IAWSVH A D +RR LVPTT   M +LR+AF +++  R +             +I +ECTL+DG+ND+  DAEALV+ +R    E  KVNL+PYND GV G++ S    +  +   VR +GG    VR  RG E+ +ACGQLAT
Sbjct:   69 PLESTVVV----EEILPDGRPPLLSLSVEELASSVGGTGRARRIWEALRKGQLPIDIDDST---EKPLSHRALTRLLEATQLLPYEVINETVSACGTVKLLVRLRDGHGVETVIIPSEK-------------GHSTLCVSSQIGCARACRFCKTGQMGLMRNLGADEILAQVFFAHRWVRESDGRTPPIRNAVFMGMGEPLNNPRAVRRAIQTMTDPFAFGLGRSHITVSTVGPSPASIRLLEDIP-VHIAWSVHAARDNVRRLLVPTTVHPMTDLRDAFADMLIARSNKHQGPGRFPKRYLNIMVECTLLDGLNDSREDAEALVELVRGLPGEP-KVNLLPYNDIGVPGYRRSPEAKVAAYLECVR-EGGVMCSVRRARGDEDMAACGQLAT 438          
BLAST of NO02G01200 vs. NCBI_GenBank
Match: XP_005823299.1 (hypothetical protein GUITHDRAFT_90026 [Guillardia theta CCMP2712] >EKX36319.1 hypothetical protein GUITHDRAFT_90026 [Guillardia theta CCMP2712])

HSP 1 Score: 260.0 bits (663), Expect = 1.400e-65
Identity = 163/391 (41.69%), Postives = 224/391 (57.29%), Query Frame = 0
Query:   63 LDGDRHLLSTRKQTLLELGTAGLEDVLRGKGRARMVWRAVREGLDPYQTDPDASLYDGRITRKTRNLLQERVQ-VPHWTVAETTRSPCGTVKLLIRLRDGLLVESVVIPSAEKTVNGKASASTVASRSTVCVSSQVGCAQACAFCLTGMMGFIRHLKADEILMQLQLALQVARKDGLPDVRNVVFMGMGEPLNNPHAVSQALQAMTDAHGFALSPNFVTVSTVAPSPAHIRRFLGMPKAKIAWSVHGATDVMRRALVPTTSATMVELREAFREVMAQRGDTDIFIECTLIDGVNDALADAEALVDFLRPFGRE-------------------SVKVNLIPYNDTGVNGWKPSKWDTILNFQAYVRTQGGWPTFVRTPRGREESSACGQLAT 434
            +D D  + + R      L   G  ++L G G+A++VW ++R G DP+         D  +T K R  L+E  Q +P   V+  TR+ CGT+KLLI ++DG+ +ESVVIP   +      +AS V  R+T+CVSSQVGC +AC+FC TG MGFIR L + EIL Q+ +AL+  +++ LP + N+VFMGMGEPLNN      A + +TD + F ++ N VTVS+V PSPA IR   G+P A +AWSVH A D  R  LVPTT+ TMVELR+        +G+    +  TLIDG+ND++  A+ L+  L P   +                    V V+LIPYND G     P   D  L   A    + G+  FVR  RG ++S+ACGQLAT
Sbjct:   10 IDADALVQTPRPSVFEHLPDLG--ELLGGTGKAKLVWASIRAGRDPWT--------DETVTEKARKKLKENFQEIPR--VSHVTRASCGTIKLLIAMQDGMEIESVVIPHEGR----PTAASVVEPRTTLCVSSQVGCNRACSFCATGKMGFIRQLTSHEILSQVYIALRCIKEENLPPLHNIVFMGMGEPLNN---FVNACEVLTDQNCFQMAKNRVTVSSVGPSPAVIRAAAGIP-AMLAWSVHAADDTTRSKLVPTTANTMVELRD--------QGERMTSVAVTLIDGINDSVEQADQLMKLLTPLLEQGPALMPAESLLRFHVLAGLKVCVDLIPYNDIGTEDCTPPA-DVHLQVPA-AHHERGFACFVRVTRGDDQSAACGQLAT 370          
BLAST of NO02G01200 vs. NCBI_GenBank
Match: XP_005821499.1 (hypothetical protein GUITHDRAFT_119263 [Guillardia theta CCMP2712] >EKX34519.1 hypothetical protein GUITHDRAFT_119263 [Guillardia theta CCMP2712])

HSP 1 Score: 256.1 bits (653), Expect = 2.000e-64
Identity = 156/376 (41.49%), Postives = 219/376 (58.24%), Query Frame = 0
Query:   74 KQTLLELGTAGLEDVLRGKGRARMVWRAVREGLDPYQTDPDASLYDGRITRKTRNLLQERVQVPHWTVAETTRSPCGTVKLLIRLRDGLLVESVVIPSAEKTVNGKASASTVASRSTVCVSSQVGCAQACAFCLTGMMGFIRHLKADEILMQLQLALQVARKDGLPDVRNVVFMGMGEPLNNPHAVSQALQAMTDAHGFALSPNFVTVSTVAPSPAHIRRFLGMPKAKIAWSVHGATDVMRRALVPTTSATMVELREAFREVMAQRGDTDI-FIECTLIDGVNDALADAEALVDFLRPFGRE---SVKVNLIPYNDTGVNGWKPSKWDTILNFQAYVRTQGGWPTFVRTPRGREESSACGQLATEIAARGTDGGNG 446
            K  LL      L  +++G GRA  VW+ +R+G++         ++D ++       L ++  +P   V + T S CGT KLLI L DG  VE+V+IPS E   +GK       SR+T+CVSSQVGCA+ C FC TG +G    L+ADEILMQ+   L+V R++ LP   ++VFMGMGEPLNN   V +A++ +T    F + PN VT+STV P+P  IR+    P  +IAWS+H A D +R+ LVPT + T V LR+AF EV+  R    +  IE TL+DG+ND+   A  LV+F +P+ RE    +K+NL+P N  G    +PS  +T L F+  +  Q G    +R  RG  + SACGQL+ E+      G  G
Sbjct:   42 KWNLLLTKPDDLSKLMQGPGRAETVWKKLRQGIE--------EIHDIQVNPIIVEALCKKCYIPSIDVKKVTLSSCGTRKLLIALEDGQSVETVLIPSPEHLESGK-------SRTTICVSSQVGCARGCVFCATGRLGLRGQLEADEILMQVFHGLRVIREENLPAKVSIVFMGMGEPLNNFKEVQRAIEMLTLQDAFRIHPNAVTISTVGPNPDAIRKLAQCP-TRIAWSLHAADDEVRKRLVPTHTHTAVALRDAFMEVILARDKKLMPLIEITLVDGINDSEKHARDLVEFFKPW-RELGIKIKINLLPCNSIGDPELRPSHPETTLKFRNLL-VQEGCVAIIRRARGDADGSACGQLSAEMTPLPKQGKEG 399          
BLAST of NO02G01200 vs. NCBI_GenBank
Match: GAX18527.1 (hypothetical protein FisN_10Hh273 [Fistulifera solaris])

HSP 1 Score: 250.8 bits (639), Expect = 8.200e-63
Identity = 162/404 (40.10%), Postives = 219/404 (54.21%), Query Frame = 0
Query:   40 LATAAVPTSTSPAHSPVPSTLTILDGDRHLLSTRKQTLLELGTAGLEDVLRGKGRARMVWRAVREGLDPYQTDPDASLYDGRITRKTRNLLQERVQVPHWTVAETTRSPCGTVKLLIRLRDGLLVESVVIPSAEKTVNGKASASTVASRSTVCVSSQVGCAQACAFCLTGMMGFIRHLKADEILMQLQLALQVARKDGLPDVRNVVFMGMGEPLNNPHAVSQALQAMTDAHGFALSPNFVTVSTVAPSPAHIRRFLGMPKAKIAWSVHGATDVMRRALVPTTSATMVELREAFREVMAQRGD--TDIFIECTLIDGVNDALADAEALVDFLRP---FGRESVKVNLIPYNDTGVNGWKPSKW-----DTILNFQAYVRTQGGWPTFVRTPRGREESSACGQLAT 434
            L+   +PT+T    S  P +LT+            +  ++LG         GKGRA+  W A R G DP              T   + LLQ    V   T+   T    GT KLL++L DGL VE+V+IP  E+             RSTVC+SSQVGC QAC FCLTG MG +R+L  DEI+ Q+  A +V     +P + N+VFMG+GEP +N  AV  A + +TD H FAL+P  VT+STVAP+P    + LG   A +AWSVH   DV+R+ LVPTT  +M ELR+     + QR     +I +E TL+D +ND + DA+ LV+F +P        V VNLIP+ND  V     +++     + I  FQ Y+  QG    F+RT RG +E +ACGQL+T
Sbjct:   30 LSAVTLPTTTPRPSSRSPLSLTL-----------DELSVQLG---------GKGRAQACWEAYRSGTDPILG-----------TEAQQRLLQRPADVA--TLHHQTTCHDGTTKLLLQLPDGLQVETVIIPWPER------------QRSTVCISSQVGCRQACTFCLTGRMGLLRNLSCDEIVSQVYWAQRVVHSKEMPPIDNIVFMGLGEPADNVDAVVAAAECLTDPHRFALTPRRVTISTVAPTPDAFAK-LGRAPAVLAWSVHATRDVLRKQLVPTTRYSMTELRDGLVSTLVQRSKRRRNILLEITLLDQINDTIEDAQHLVEFCQPLVAIPGVRVIVNLIPWNDIQVQTGAAAQYRQPSPERIEAFQQYLVQQGNLRCFIRTTRGDDELAACGQLST 387          
BLAST of NO02G01200 vs. NCBI_GenBank
Match: GAX25077.1 (23S rRNA (adenine2503-C2)-methyltransferase [Fistulifera solaris])

HSP 1 Score: 246.1 bits (627), Expect = 2.000e-61
Identity = 158/374 (42.25%), Postives = 206/374 (55.08%), Query Frame = 0
Query:   71 STRKQTLLELGTAGLEDVLRGKGRARMVWRAVREGLDPYQTDPDASLYDGRITRKTRNLLQERVQVPHWTVAETTRSPCGTVKLLIRLRDGLLVESVVIPSAEKTVNGKASASTVASRSTVCVSSQVGCAQACAFCLTGMMGFIRHLKADEILMQLQLALQVARKDGLPDVRNVVFMGMGEPLNNPHAVSQALQAMTDAHGFALSPNFVTVSTVAPSPAHIRRFLGMPKAKIAWSVHGATDVMRRALVPTTSATMVELREAFREVMAQRGD--TDIFIECTLIDGVNDALADAEALVDFLRP---FGRESVKVNLIPYNDTGVNGW------KPSKWDTILNFQAYVRTQGGWPTFVRTPRGREESSACGQLAT 434
            ST   + L L    L   L GKGRA+  W A R G DP              T   + LLQ    V   T+   T    GT KLL++L D L VE+V+IP  E+             RSTVC+SSQVGC QAC FCLTG MG +R+L  DEI+ Q+  A +V +   +  + NVVFMG+GEP +N  AV  A + +TD H FA++P  VT+STVAP+P    + L    A +AWSVH   D +R+ LVPTT  +M ELRE     + QR     +I +E TL+D +ND++ DA+ LV+F +P        V VNLIP+ND  V         KPS  + I  FQ Y+  QG    F+RT RG +E +ACGQL+T
Sbjct:   40 STTPLSPLSLTLDELSLQLGGKGRAQACWEAYRSGTDPILG-----------TEAQQRLLQRPPDVA--TLHHQTTCHDGTTKLLLQLPDNLQVETVIIPWPER------------QRSTVCISSQVGCRQACTFCLTGRMGLLRNLSCDEIVSQVYWAQRVVKTTAMLPIENVVFMGLGEPADNVDAVVAAAECLTDPHRFAMTPRRVTISTVAPTPDAFAK-LNRAPAVLAWSVHATRDALRKQLVPTTKYSMTELREGLVSTLEQRSKRRRNILLEITLLDQINDSIEDAQHLVEFCQPLVAIPGVRVIVNLIPWNDIQVQTGAAAQYRKPSP-ERIEAFQHYLIQQGNLRCFIRTTRGDDELAACGQLST 386          
BLAST of NO02G01200 vs. NCBI_GenBank
Match: OLP93028.1 (Dual-specificity RNA methyltransferase RlmN [Symbiodinium microadriaticum])

HSP 1 Score: 236.1 bits (601), Expect = 2.100e-58
Identity = 152/367 (41.42%), Postives = 203/367 (55.31%), Query Frame = 0
Query:   95 ARMVWRAVREGLDPYQTDPDASLYDGRITRKTRNLLQERVQVPHWTVAETTRSPCGTVKLLIRLRDGLLVESVVIPSAEKTVNGKASASTVASRSTVCVSSQVGCAQACAFCLTGMMGFIRHLKADEILMQLQLALQVARKDGLPDVRNVVFMGMGEPLNNPHAVSQALQAMTDAHGFALSPNFVTVSTVAPSPAHIRRFLGMPKAKIAWSVHGATDVMRRALVPTTSATMVELREAFREVMAQRGD--TDIFIECTLIDGVNDALADAEALVDFLRPFGRESVKVNLIPYNDTGVNG--------------WKPSKWDTILNFQAYVRTQGGWPTFVRTPRGREESSACGQLATEIAARGTDGGNG 446
            A   W AVREG DP++ +  +      +      L  E V  PH    E+T S   T K+L+RL D L VE V+I               +A  S++CVSSQVGC QAC FC TG +G +R+L   EIL Q+ LA + AR    P VRN+VFMGMGEP NN  +VS+AL+ +TD   F +S  ++TVSTVAPSPA I     +P  K+AWSVH ATDV+RR LVP++   + +LR+AF + +  R +    +  E  L+D VN     A+AL + L PF RE + VNLIPYND  ++G               +    DT+ +FQ  +  Q G    VR  RG  ++SACGQLAT       +G +G
Sbjct: 1011 ASRTWEAVREGRDPFKPEGSSKRLQRMLAELA--LTMEPVAAPH---VESTESSDSTCKMLLRLEDDLSVECVLI--------------RMAKHSSLCVSSQVGCKQACVFCATGKLGEVRNLTTHEILAQVWLAQRQARALDWPKVRNLVFMGMGEPANNLDSVSRALELLTDNTSFHMSRWYITVSTVAPSPAQILSLSELP-CKLAWSVHAATDVLRRKLVPSSKYPLADLRDAFLKCLLLRPERFRQLICEVVLLDEVNTDQGHAKALSELLSPFEREELLVNLIPYND--IHGLVARGAAMDVQTAQLRAPTLDTVRSFQRSL-WQNGLYCSVRQTRGESKASACGQLATVAGLADAEGEDG 1354          
BLAST of NO02G01200 vs. NCBI_GenBank
Match: OGQ77636.1 (hypothetical protein A2289_06300 [Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15] >OGR09856.1 hypothetical protein A2341_14215 [Deltaproteobacteria bacterium RIFOXYB12_FULL_58_9])

HSP 1 Score: 230.3 bits (586), Expect = 1.100e-56
Identity = 139/352 (39.49%), Postives = 209/352 (59.38%), Query Frame = 0
Query:   83 AGLEDVLRGKGRARMVWRAVREGLDPYQTDPDASLYDGRITRKTRNLLQERVQVPHWTVAETTRSPCGTVKLLIRLRDGLLVESVVIPSAEKTVNGKASASTVASRSTVCVSSQVGCAQACAFCLTGMMGFIRHLKADEILMQLQLALQVARKDGLPDVRNVVFMGMGEPLNNPHAVSQALQAMTDAHGFALSPNFVTVSTVAPSPAHIRRFLGMPKAKIAWSVHGATDVMRRALVPTTSATMVELREAFREVMAQRGDTDIFIECTLIDGVNDALADAEALVDFLRPFGRESVKVNLIPYNDTGVNGWKPSKWDTILNFQAYVRT--QGGWPTFVRTPRGREESSACGQLA 433
            A L ++L G GRA+ VWRA+  G DP+          G ++ + R  L  R +     + + T +  GT+K L+ L DG  +E VVIP      NG         R+TVCVS+QVGC +AC+FC+T ++G  R L A EI+ Q++LA +++++  +P +RNVVFMGMGEPL+N  AV Q +  + D +G ++ P  +T+STV  +P  I     +P   +AWS+H A D +R  LVPT    +++LR+AF  V+  R +  +F+E  LI G+ND +  AE L DFL PFG ++V++NL+P N  G     PS+ +++    AY +T  + G+   +R PRG   ++ACGQLA
Sbjct:    4 AELGEMLGGSGRAKQVWRALLRGDDPFA--------PGALSERARLKLVGRCRPTSAALGKQTVADDGTLKALVELEDGNAIEMVVIPK-----NG---------RTTVCVSTQVGCKRACSFCVTALVGLRRSLSAAEIVFQVELARRMSQERKMPPLRNVVFMGMGEPLDNLDAVKQGVAVLCDQNGLSIPPRHITLSTVGTTPTKIWSLKDLP-VSVAWSLHTADDELRHKLVPTMRHALIDLRDAFVRVVQNR-NALLFVEMALIAGINDDIQSAEKLADFLVPFG-DNVRINLLPLN-PGRGDLAPSQPESV---GAYRQTLIERGYFCILRQPRGLGANAACGQLA 326          
BLAST of NO02G01200 vs. NCBI_GenBank
Match: GAX18539.1 (hypothetical protein FisN_10Hu260 [Fistulifera solaris])

HSP 1 Score: 230.3 bits (586), Expect = 1.100e-56
Identity = 147/384 (38.28%), Postives = 216/384 (56.25%), Query Frame = 0
Query:   78 LELGTAGLEDVLRGKGRARMVWRAVREGLDPYQTDPDASLYDGRIT--------RKTRNLLQE------------RVQVPHWTVAETTRSPCGTVKLLIRLRDGLLVESVVIPSAEKTVNGKASASTVASRSTVCVSSQVGCAQACAFCLTGMMGFIRHLKADEILMQLQLALQVARKDGLPDVRNVVFMGMGEPLNNPHAVSQALQAMTDAHGFALSPNFVTVSTVAPSPAHIRRFLGMPKAKIAWSVHGATDVMRRALVPTTSATMVELREAFREVMAQRGDTD---IFIECTLIDGVNDALADAEALVDFLRPFGRE----SVKVNLIPYNDTGVNGWKPSKWDTILNFQAYVRTQGGWPTFVRTPRGREESSACGQLATE 435
            + +G   L   L G GRAR+VW     G+DP     D+   +   T        R+++ L +E            R++    +++  ++S   T KLL+RL DGL VE+V+IP  +             +RSTVC+SSQVGC Q C FC TG MG +R L +DEI+ Q   A +++R   LP++RNVVFMGMGEP +N   V +A Q +T    F LS   VTVSTVAP+P   ++F+  P   +AWSVH A + +R+ LVPTT  +M ELR+   + + QR   +   + +E  L+DGVND+L +A+ L +F R    +     + VNLIP+ND G + ++    + ++ FQ  +   G + T +R  RG +ES+ACGQLAT+
Sbjct:   20 ISMGVEELAQQLGGLGRARLVWDYYSIGIDPAVYFDDSCETESIETIQKLLPSSRRSQPLGKEALDRLSSLYPAGRLEGGVASLSHISQSRDKTTKLLLRLADGLEVETVIIPWGD-------------TRSTVCISSQVGCRQGCTFCATGRMGKMRSLTSDEIIAQFFFAKKISRTHHLPEIRNVVFMGMGEPADNAENVVRATQILTTRELFQLSAMKVTVSTVAPTPDAFQQFVHAP-CVLAWSVHAANNELRKKLVPTTQYSMEELRQGLIDTLLQRPMNNFRVVMLEVALMDGVNDSLKEADELAEFARVLVEQVPGCKMTVNLIPFNDIGQHLYRKPSEERVVAFQRRLWEHGIF-THIRNTRGDDESAACGQLATK 388          
The following BLAST results are available for this feature:
BLAST of NO02G01200 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30490.17.300e-14462.78hypothetical protein Naga_100013g86 [Nannochlorops... [more]
CBJ49163.14.800e-7948.46conserved unknown protein [Ectocarpus siliculosus][more]
CEM19671.11.500e-7244.53unnamed protein product [Vitrella brassicaformis C... [more]
XP_005823299.11.400e-6541.69hypothetical protein GUITHDRAFT_90026 [Guillardia ... [more]
XP_005821499.12.000e-6441.49hypothetical protein GUITHDRAFT_119263 [Guillardia... [more]
GAX18527.18.200e-6340.10hypothetical protein FisN_10Hh273 [Fistulifera sol... [more]
GAX25077.12.000e-6142.2523S rRNA (adenine2503-C2)-methyltransferase [Fistu... [more]
OLP93028.12.100e-5841.42Dual-specificity RNA methyltransferase RlmN [Symbi... [more]
OGQ77636.11.100e-5639.49hypothetical protein A2289_06300 [Deltaproteobacte... [more]
GAX18539.11.100e-5638.28hypothetical protein FisN_10Hu260 [Fistulifera sol... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR033ncniR033Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006732NSK006732Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G01200.1NO02G01200.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|573839gene_701Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G01200.1NO02G01200.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G01200 ID=NO02G01200|Name=NO02G01200|organism=Nannochloropsis oceanica|type=gene|length=3356bp
CACCTCCAGTGGTAGTAGGATAAGTGAAAGCCCTTGTCGTTTCGAAAACA
TGTCTTTCTTTCAGTCTTTCTGGTGAGAGTGCCTAGCAGCTTTGCTGTCT
GTCCATGGATGTAGCCAGCAAACGCAACCTTTCTCCCCTTCCTCCATCCC
CGCTCCCTCCCTCCCTTCTCCAAGTTATATATCTCACAGCCTCTGTTTTC
TCATATTCATGACTTCTAGCCTGCTTTTCCCGCCTTCTCCTCCTCGTTCT
CCTTCTCCCCTCCAACAACCTCGGTGACGAAGTTGTTGTTTGTGTAGACA
CAGATATCGGCGGCAATGGACATGGCTTTGTGTGCGATTTGCTCAGCGTC
CATGTCGTCCCGGTCCAGTAACGCTTTGGCCGCAGCTGTTGTAAATGAGT
TGGTGTATAGGCGTTTCAACATGGTTGGAGTGATGCTGAAACCAAAAAAA
CAATTGCCGCGCGAATGACGGGACAAGAGACAGGTATAATATTGACCAGC
AATGATGGAGAGTGAGGGAAAGACTTTGGCTGTGTAAGTCTATGGTTGAG
AAAGTATACAAGCATCCTAAAGGGGGAAAATGATATCTTCATGTGAATGA
ACCGGGTAAAACGCTCTTCTTCGCGTGGCTTGTCTTCCACAAGTCAGAGT
ACCTCACCACTCCTCTCCTCCTCTCCACATCTCTATACCACTTCCTCTCC
AAAGAAAAGCATCATCCCACCTACAACCACTTACCTAATGCAAATGTACC
CCCGGAACCAATGGCAATTATCCCATCCTTGGGCTCCAACACGTCACCCA
GTCCCGTAATCTCAAACGACACGTTCTTATCCGCCACCAACAATGACGCC
TCCAACCGCCGCAAGTACTTGTCTGTCCGCCAGGCTTTCGCTAAATCTAC
GCATGCCCGTGTTAACTGACCTGGATGCTCCTCCAGTTTCCGCTCCAGAC
GCTCCATCAGCGTGAAGCAGTCAGCGGTCGAGCCAGCAAAACCAGCAATT
ATGTCCTCTCCAATCCGCCGCACCTTTTTCGCATTCGGCTTCACCACCGT
GGACCCTTGTGATACTTGCCCGTCACCCATCATGACCACCTTGTCGCCCT
TGCGTACACAGAGGATGGTGGTGGCGTGCATCGTCAAGTGGCCTGCATGG
TCCCCGCCGTAAAACCCATAACGCGGGTGTAGGGCGGCGGGTTTAGAAGA
CACCCACCTCTTGGTGCCGCTGTAAGCGTTGCTGCTGCTGGCCAGGGAGC
TGCTGATGCTTGGTATCGAAGCCAAGGGCGACAGCATGGCAGCCACCGGC
GGCTTGGTGGCAGTGCGGACGATGTGGGTCAGCATAGCTTCTTTAGGCGT
GTCTGTGTTGAGTGTGAGTGGGTGTTTAAGGGGGCGGAGGAAAAATGATA
AGAGACAGGTCAAAGGACGGCTGACAGGGAAATAAGTAGACGGGGCGACA
GAAGCAAGAGTGGCATGTATTTTGGGTCGACAATGATGGCTGTGTACGTG
AGCACTATATGCACATATTGTGCTTGATCACCTGACTCCGGCTCGCCACC
TATCGACGTGCTACATCTTTTCTCGTTACGATAAATGCAGATGTAGATAT
TGATGGACGCCTTCCCCACACGCCTCGACATAGGCAGCGTAGTGTGACCT
TGTCCTCCACGGCACAGGCGCGGTAGTTTAGCGCTCAGGAGGTCACAAGA
GACGAAAAATCAGCATCATCATCGAGGGACCGGAGCAACATGGGCAAGCT
CATGGCGCTCTTGCTGCTCTCTTCCGCCACGGCCTTCCTCGTGAAGCCTC
GTCCCTCTCTTTCCTCTGGCACTGCTTGTATCAATAGGAGGCGCCCTCTT
GCCACGCTCGCAACTGCTGCCGTCCCCACCAGCACCAGCCCTGCGCACTC
GCCTGTGCCCTCGACTCTCACCATCCTCGACGGCGACCGCCATCTCCTAT
CAACCAGAAAGCAGACCCTCTTAGAGCTCGGTACGGCGGGTTTGGAGGAT
GTTTTGCGAGGTAAGGGGAGGGCCCGCATGGTCTGGCGCGCCGTCCGGGA
AGGCCTCGATCCATATCAAACCGACCCCGACGCTTCGCTCTACGACGGAC
GAATTACGAGAAAAACTCGGAATTTGCTGCAAGAACGTGTCCAAGTCCCG
CATTGGACCGTAGCGGAGACGACACGTAGCCCCTGTGGTACGGTCAAGCT
TTTGATTCGATTGCGTGATGGGCTTTTGGTAGAGAGCGTGGTAATCCCTA
GCGCTGAGAAAACTGTCAATGGCAAAGCCTCTGCATCTACTGTGGCGTCT
CGTTCCACGGTCTGTGTTTCCTCGCAGGTGGGCTGTGCGCAGGCATGTGC
GTTTTGTTTGACGGGGATGATGGGATTCATTCGGCATCTAAAAGCTGACG
AAATCTTGATGCAGCTTCAGTTAGCGTTGCAGGTGGCGAGGAAGGACGGG
TTACCCGACGTGCGAAACGTGGTTTTTATGgtgagtggtgctatttaaat
accaggcggtctaagttgataaaaatctcttcgggtgcgggatgttttgt
ttacatcatccgatccccattttgcgctcaggccaccacttatttctctc
ccacctccttttccactgacacatctgaaaacacaacaaatagGGTATGG
GCGAGCCTCTCAACAACCCCCACGCCGTCTCCCAGGCACTCCAAGCCATG
ACAGACGCCCATGGCTTCGCTCTCTCTCCCAACTTTGTCACCGTCTCTAC
CGTCGCTCCTTCTCCCGCCCACATCCGGCGTTTCCTAGGCATGCCTAAGG
CCAAAATCGCCTGGTCTGTCCACGGAGCAACAGACGTCATGAGGCGGGCC
TTGGTCCCTACTACTAGTGCAACGATGGTCGAGTTGCGGGAGGCTTTTAG
GGAGGTGATGGCCCAGAGGGGAGATACAGACATTTTTATCGAATGTACGT
TAATTGACGGTGTAAATGATGCGTTGGCCGACGCGGAGGCGTTGGTGGAT
TTCCTACGGCCATTTGGGAGAGAGAGTGTGAAAGTAAATCTCATCCCGTA
CAATGATACGGGGGTGAATGGATGGAAACCCTCGAAATGGGACACTATTT
TGAATTTTCAAGCTTACGTGCGGACTCAGGGCGGATGGCCAACCTTTGTA
AGGACGCCACGGGGAAGGGAGGAATCGAGCGCCTGTGGCCAGTTGGCAAC
TGAGATAGCGGCGCGAGGTACTGATGGTGGAAATGGGGGCTAGAAGATGC
GAAAGAGTAAAAGTAAAAGGCACGAGGAAGTCGTATAATCGAGCAGGAGC
AGGGCAGCGCTTGTAAATCTGTACAAAAAGAAATAAAAGTAACGACCAAT
TAGAGA
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protein sequence of NO02G01200.1

>NO02G01200.1-protein ID=NO02G01200.1-protein|Name=NO02G01200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=447bp
MGKLMALLLLSSATAFLVKPRPSLSSGTACINRRRPLATLATAAVPTSTS
PAHSPVPSTLTILDGDRHLLSTRKQTLLELGTAGLEDVLRGKGRARMVWR
AVREGLDPYQTDPDASLYDGRITRKTRNLLQERVQVPHWTVAETTRSPCG
TVKLLIRLRDGLLVESVVIPSAEKTVNGKASASTVASRSTVCVSSQVGCA
QACAFCLTGMMGFIRHLKADEILMQLQLALQVARKDGLPDVRNVVFMGMG
EPLNNPHAVSQALQAMTDAHGFALSPNFVTVSTVAPSPAHIRRFLGMPKA
KIAWSVHGATDVMRRALVPTTSATMVELREAFREVMAQRGDTDIFIECTL
IDGVNDALADAEALVDFLRPFGRESVKVNLIPYNDTGVNGWKPSKWDTIL
NFQAYVRTQGGWPTFVRTPRGREESSACGQLATEIAARGTDGGNGG*
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Synonyms
Publications