NO02G01020, NO02G01020 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G01020 vs. NCBI_GenBank
Match: EWM30568.1 (Zinc finger, HIT-type [Nannochloropsis gaditana]) HSP 1 Score: 179.5 bits (454), Expect = 1.000e-41 Identity = 99/190 (52.11%), Postives = 115/190 (60.53%), Query Frame = 0 Query: 1 MANRSGKKTVGTATANELAASGCEVCCAEGSQGKYKCPTCHLRYCSVACCRTHKETPCEKKDPRRAAIAGAGKKRGRGAAADGFFPVPSS--IARRHHRDVAQAAQGQKEEEENWPVLTDDMRKALSESKWLRSALEDSTLCSLLTDIDGNPHRVDKLREALGHYPDLKGFVDRLLLEVGALKYENGQLI 189 M NR+ KK + TA + A GCEVCC +QGKYKCP C LRYCSV+C R HK PCEKK+P A+ A G+KR R + D FFPVPSS RKAL SKWL+ ALEDSTLCSLLTDID + HR +L E L YP+LK FVDR+LLE+GALKYE G L+ Sbjct: 1 MKNRNDKKAM-TAGNGKTAMPGCEVCCVADNQGKYKCPNCLLRYCSVSCYREHKNAPCEKKEP--ASTAAHGRKRARESTRDDFFPVPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKALMGSKWLQGALEDSTLCSLLTDIDSDRHRAQRLSEELNKYPELKSFVDRVLLEIGALKYEEGHLV 187
BLAST of NO02G01020 vs. NCBI_GenBank
Match: XP_005855043.1 (hit-type zinc finger protein, partial [Nannochloropsis gaditana CCMP526] >EKU21319.1 hit-type zinc finger protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 175.3 bits (443), Expect = 1.900e-40 Identity = 98/190 (51.58%), Postives = 114/190 (60.00%), Query Frame = 0 Query: 1 MANRSGKKTVGTATANELAASGCEVCCAEGSQGKYKCPTCHLRYCSVACCRTHKETPCEKKDPRRAAIAGAGKKRGRGAAADGFFPVPSS--IARRHHRDVAQAAQGQKEEEENWPVLTDDMRKALSESKWLRSALEDSTLCSLLTDIDGNPHRVDKLREALGHYPDLKGFVDRLLLEVGALKYENGQLI 189 M NR+ KK + TA + A GCEVC +QGKYKCP C LRYCSV+C R HK PCEKK+P A+ A G+KR R + D FFPVPSS RKAL SKWL+ ALEDSTLCSLLTDID + HR +L E L YP+LK FVDR+LLE+GALKYE G L+ Sbjct: 11 MKNRNDKKAM-TAGNGKTAMPGCEVCFVADNQGKYKCPNCLLRYCSVSCYREHKNAPCEKKEP--ASTAAHGRKRARESTRDDFFPVPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKALMGSKWLQGALEDSTLCSLLTDIDSDRHRAQRLSEELNKYPELKSFVDRVLLEIGALKYEEGHLV 197
BLAST of NO02G01020 vs. NCBI_GenBank
Match: GAX13645.1 (hypothetical protein FisN_14Lu344 [Fistulifera solaris]) HSP 1 Score: 76.3 bits (186), Expect = 1.200e-10 Identity = 57/176 (32.39%), Postives = 77/176 (43.75%), Query Frame = 0 Query: 23 CEVCCAEGSQGKYKCPTCHLRYCSVACCRTHKETPCEKKDPRRAAI-AGAGKKRGRGAAADGFFPVPSSIARRHHRDVAQAAQGQKEEEENWPVLTDDMRKALSESKWLRSALEDSTLCSLLTDIDGNPHRVDK---------------LREALGHYPDLKGFVDRLLLEVGALKY 183 C V C + Q KYKCP C YC++ACCR HKE C A A A K R A+ P + R + +Q ++ EE W ++T +M+ L + WLR L D+ L LL I P+ V K L + P K F+D+L L G L+Y Sbjct: 47 CSV-CEQVPQPKYKCPKCRATYCNIACCRQHKENGCATTSAVTVATEATANSKYVREASK----LAPEKLVAR--KRSSQGNGNAEDREEGW-IITSEMKTRLQTNDWLRKELRDAGLRQLLVQIYEAPNVVSKKKRHGFNAQTEQEQVLEKIKEENPQFKSFLDKLSLVAGVLEY 214
BLAST of NO02G01020 vs. NCBI_GenBank
Match: KHG28067.1 (Zinc finger HIT domain-containing 3 [Gossypium arboreum]) HSP 1 Score: 73.6 bits (179), Expect = 7.900e-10 Identity = 51/152 (33.55%), Postives = 79/152 (51.97%), Query Frame = 0 Query: 23 CEVCCAEGSQGKYKCPTCHLRYCSVACCRTHKETPCEKKD--PRRAAIAGAGKKRGRGAAADGFFP------VPSSIARRHHRDVAQAAQ----GQK-EEEENWPVLTDDMRKALSESKWLRSALEDSTLCSLLTDIDGNPHRVDKLREALG 162 C+VC +Q KYKCP+C + YCS+AC +THKETPCEK + ++ A P VP S+ + A++ G+K E E+ VL +A++ S +R AL+D L L++DID +P +++L +A+G Sbjct: 8 CQVC--NQTQSKYKCPSCLIPYCSLACFKTHKETPCEKSESVKEKSGTPSVNLGSNDNAITTSVKPESTNDAVPPSVETKSSEGRPTASREFLVGRKLEVEDPSEVLQIMQMQAIASSNDIREALKDEHLQKLISDIDSSPDALNELDKAMG 157
BLAST of NO02G01020 vs. NCBI_GenBank
Match: XP_002179296.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49119.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 73.2 bits (178), Expect = 1.000e-9 Identity = 55/184 (29.89%), Postives = 87/184 (47.28%), Query Frame = 0 Query: 16 NELAASGCEVCCAEGSQGKYKCPTCHLRYCSVACCRTHKETPCEK------KDPRRAAIAGAGKKRGRGAAADGFFPVPSSIARRHHRDVAQAAQGQKEE---EENWPVLTDDMRKALSESKWLRSALEDSTLCSLLTDIDGNPHRVDK---------LREALGHYPDLKGFVDRLLLEVGALK 182 + + A C V C + KYKCP C YCS+ CCR HK+ CE + P +A G + P+ S+ A + A+Q +K+E +E W + M A+ S WLR L+DS L +L+T I + + +D+ L++A +P + F+D+LL+ G L+ Sbjct: 85 SSIDAPSCSV-CRQVDHPKYKCPKCRATYCSILCCRRHKDGLCEATKATIIETPNSKTLATTGVTSKYLTNDNVPMPLLSATA-------SSASQRRKDEDDLDEGWKI-DSTMTHAMQSSLWLRQELQDSGLRALITRIVNSSNTLDRDLHTAQERALQQAKDDHPMFQRFIDKLLVLSGVLE 259
BLAST of NO02G01020 vs. NCBI_GenBank
Match: XP_020241822.1 (zinc finger HIT domain-containing protein 3-like isoform X3 [Asparagus officinalis]) HSP 1 Score: 70.9 bits (172), Expect = 5.100e-9 Identity = 46/158 (29.11%), Postives = 77/158 (48.73%), Query Frame = 0 Query: 18 LAASGCEVCCAEGSQGKYKCPTCHLRYCSVACCRTHKETPCEKKDPRRAAIAGAGKKRGRGAAADGFFPVPSSIARRHHRDVAQAAQGQKEEEENWP--VLTDDMRKALSESKWLRSALEDSTLCSLLTDIDGNPHRVDKLREALGHYPDLKGFVDRL 174 + + CEVC +G+Q KYKCPTC + YCS+ C + HK+ PCEK PVP S H D + ++ +E + P VL+ + +++ +S +RS L D L ++ +D + ++L +A+G L+ F D++ Sbjct: 42 MGSKNCEVC--KGAQSKYKCPTCFIPYCSMVCFKKHKDIPCEK-------------------------PVPPSEEPPKHSDTLKDITDERLQEIDDPSCVLSKEQLESIVKSSEIRSFLADVNLQEMIQKVDSSQDPENELDKAMGDQTILQ-FTDKV 171
BLAST of NO02G01020 vs. NCBI_GenBank
Match: XP_020241681.1 (zinc finger HIT domain-containing protein 3-like [Asparagus officinalis]) HSP 1 Score: 70.1 bits (170), Expect = 8.700e-9 Identity = 46/158 (29.11%), Postives = 76/158 (48.10%), Query Frame = 0 Query: 18 LAASGCEVCCAEGSQGKYKCPTCHLRYCSVACCRTHKETPCEKKDPRRAAIAGAGKKRGRGAAADGFFPVPSSIARRHHRDVAQAAQGQKEEEENWP--VLTDDMRKALSESKWLRSALEDSTLCSLLTDIDGNPHRVDKLREALGHYPDLKGFVDRL 174 + + CEVC +G Q KYKCPTC + YCS+ C + HK+ PCEK PVP S H D + ++ +E + P VL+ + +++ +S +RS L D L ++ +D + ++L +A+G L+ F D++ Sbjct: 1 MGSKNCEVC--KGEQSKYKCPTCFIPYCSMVCFKKHKDIPCEK-------------------------PVPPSEEPPKHSDTLKDITDERLQEIDDPSCVLSKEQLESIVKSSEIRSFLADVNLQKMIQKVDSSRDPENELDKAMGDQTFLQ-FTDKV 130
BLAST of NO02G01020 vs. NCBI_GenBank
Match: ONK61823.1 (uncharacterized protein A4U43_C08F33960 [Asparagus officinalis]) HSP 1 Score: 69.7 bits (169), Expect = 1.100e-8 Identity = 46/165 (27.88%), Postives = 79/165 (47.88%), Query Frame = 0 Query: 18 LAASGCEVCCAEGSQGKYKCPTCHLRYCSVACCRTHKETPCEKKDPRRAAIAGAGKKRGRGAAADGFFPVPSSIARRHHRDVAQAAQGQKEEEENWPVLTDDMRKALSESKWLRSALEDSTLCSLLTDIDGNPHRVDKLREALGHYPDLKGFVDRLLLEVGALKY 183 + + CEVC +G+Q KYKCPTC + YCS+ C + HK+ PCEK P P S + DV A+ +E ++ VL+ + +++ +S +RS L D L ++ +D + ++L +A+G L+ F D++ + +Y Sbjct: 1 MGSKNCEVC--KGAQSKYKCPTCFIPYCSMVCFKKHKDIPCEKPVPPSEE------------------PPKHSDTLKDITDVIVCAERLQEIDDPSCVLSKEQLESIVKSSEIRSFLADVNLQEMIQKVDSSQDPENELDKAMGDQTILQ-FTDKVRSVINPEEY 144
BLAST of NO02G01020 vs. NCBI_GenBank
Match: XP_020529173.1 (zinc finger HIT domain-containing protein 3 isoform X1 [Amborella trichopoda]) HSP 1 Score: 68.9 bits (167), Expect = 1.900e-8 Identity = 43/151 (28.48%), Postives = 75/151 (49.67%), Query Frame = 0 Query: 23 CEVCCAEGSQGKYKCPTCHLRYCSVACCRTHKETPCEKKDPRRAAIAGAGKKRGRGAAADGFFPVPSSIARRHHRDVAQAAQGQKEEEENWPVLTDDMRKALSESKWLRSALEDSTLCSLLTDIDGNPHRVDKLREALGHYPDLKGFVDRL 174 C VC +Q KYKCPTC + YCS+AC + H+E PC K D +P + +A+ + +EE+W VL D ++++ S +R+ L++ LC ++++I+ + + D+L +AL P + F D++ Sbjct: 6 CGVCVE--AQSKYKCPTCFMPYCSLACFKNHREVPCTKPD------------------------LPEQKPENNAETHLLSARSIRVDEESW-VLQKDQFESIASSYEIRNTLKNDELCRIISNINSSTNAEDELDKAL-RDPAFREFSDKI 128
BLAST of NO02G01020 vs. NCBI_GenBank
Match: XP_020241823.1 (zinc finger HIT domain-containing protein 3-like isoform X4 [Asparagus officinalis]) HSP 1 Score: 68.6 bits (166), Expect = 2.500e-8 Identity = 45/156 (28.85%), Postives = 76/156 (48.72%), Query Frame = 0 Query: 18 LAASGCEVCCAEGSQGKYKCPTCHLRYCSVACCRTHKETPCEKKDPRRAAIAGAGKKRGRGAAADGFFPVPSSIARRHHRDVAQAAQGQKEEEENWPVLTDDMRKALSESKWLRSALEDSTLCSLLTDIDGNPHRVDKLREALGHYPDLKGFVDRL 174 + + CEVC +G+Q KYKCPTC + YCS+ C + HK+ PCEK P P S + DV A+ +E ++ VL+ + +++ +S +RS L D L ++ +D + ++L +A+G L+ F D++ Sbjct: 1 MGSKNCEVC--KGAQSKYKCPTCFIPYCSMVCFKKHKDIPCEKPVPPSEE------------------PPKHSDTLKDITDVIVCAERLQEIDDPSCVLSKEQLESIVKSSEIRSFLADVNLQEMIQKVDSSQDPENELDKAMGDQTILQ-FTDKV 135 The following BLAST results are available for this feature:
BLAST of NO02G01020 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G01020 ID=NO02G01020|Name=NO02G01020|organism=Nannochloropsis oceanica|type=gene|length=588bpback to top protein sequence of NO02G01020.1 >NO02G01020.1-protein ID=NO02G01020.1-protein|Name=NO02G01020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=196bpback to top Synonyms
Publications
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