NO02G00890, NO02G00890 (gene) Nannochloropsis oceanica

Overview
NameNO02G00890
Unique NameNO02G00890
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2743
Alignment locationchr2:287708..290450 -

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Properties
Property NameValue
DescriptionProtein phosphatase 2C, manganese/magnesium aspartate binding site
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:287708..290450 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006470protein dephosphorylation
GO:0006464cellular protein modification process
Vocabulary: Molecular Function
TermDefinition
GO:0004722protein serine/threonine phosphatase activity
GO:0003824catalytic activity
GO:0016787hydrolase activity
GO:0005488binding
Vocabulary: INTERPRO
TermDefinition
IPR036457PPM-type_dom_sf
IPR015655PP2C
IPR001932PPM-type_phosphatase_dom
Homology
BLAST of NO02G00890 vs. NCBI_GenBank
Match: EWM30591.1 (Protein phosphatase 2C, manganese/magnesium aspartate binding site [Nannochloropsis gaditana])

HSP 1 Score: 419.9 bits (1078), Expect = 1.100e-113
Identity = 216/260 (83.08%), Postives = 232/260 (89.23%), Query Frame = 0
Query:  216 PYTTSVVAFKGQRSYMEDDFFISKDGSFSGVYDGHGGAAVSKYLRQNLNAQFLTALPDEDTTKLSDEVVAEALTQAFRVVDDAVLKVRHWSYMGSTAVAVVIHA------QGQGEGQPA---KRTLISANVGDSRAVLSRRGKAMDLTEDHKPNKPSELERVKALGGTVRWYGLLEQDGAPMEGMGVYRINGNLAVARAFGDRSERPFVSSEVEVKMVPVEDGDEFVILATDGLWDVMTSEDAVAFVHSVMSASVGALTE 467
            PYTTSVVAFKGQRSYMEDDFFISKDGSF+GVYDGHGGAAVSKYLRQNLNAQFL ALPD D  +L  E V EAL  AFRVVD+AV+KVRHW+YMGSTAV VVIHA      +G  EG  A   KRTLI+ANVGDSRAVLSRRG+A+DLT+DHKPNKPSELERVKALGGTVRWYGLLEQDG+PMEGMGVYRINGNLAVARAFGDRSERPFVSSE E+K + VE+GDEFVILATDGLWDVM+SE+AV FVHSVMSASVGALTE
Sbjct:  185 PYTTSVVAFKGQRSYMEDDFFISKDGSFAGVYDGHGGAAVSKYLRQNLNAQFLAALPDADMRRLGQEKVTEALATAFRVVDEAVVKVRHWAYMGSTAVVVVIHAEEAKAKEGVEEGGRAGALKRTLIAANVGDSRAVLSRRGQAVDLTDDHKPNKPSELERVKALGGTVRWYGLLEQDGSPMEGMGVYRINGNLAVARAFGDRSERPFVSSEAEIKQLAVEEGDEFVILATDGLWDVMSSEEAVNFVHSVMSASVGALTE 444          
BLAST of NO02G00890 vs. NCBI_GenBank
Match: CBN74003.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 247.7 bits (631), Expect = 7.600e-62
Identity = 135/253 (53.36%), Postives = 172/253 (67.98%), Query Frame = 0
Query:  212 IIGGPYTTSVVAFKGQRSYMEDDFFISKDGSFSGVYDGHGGAAVSKYLRQNLNAQFLTALPDEDTTKLSDEVVAEALTQAFRVVDDAVLKVRHWSYMGSTAVAVVIHAQGQGEGQPAKRTLISANVGDSRAVLSRRGKAMDLTEDHKPNKPSELERVKALGGTVRWYGLLEQDGAPMEGMGVYRINGNLAVARAFGDRSERPFVSSEVEVKMVPVE-DGDEFVILATDGLWDVMTSEDAVAFVHSVMSASVGA 464
            + G P  TSV + KG R  MED+FF+S DGSFS VYDGHGGA VS+YLR+NL    +  LP  D      E V EAL  AF+  DD V+    +   GS AV+V IH   +G     K ++IS N+GDSRAVLSR GKA+DLTEDHKPN P E+ER+    G V W G     G  +EG GVYRING+LAVARA GD   RP++S+EVE+K + ++ + D+FVILA+DGLWDVM+SE+AV +VH+VM  ++G+
Sbjct:   34 LAGRPLFTSVASTKGHRPRMEDEFFLSSDGSFSAVYDGHGGANVSEYLRRNLYKHVMDHLPPGDDV-YGLETVQEALRSAFKCADDYVITQTPYGNEGSCAVSVTIHCDREG-----KVSIISCNLGDSRAVLSRGGKALDLTEDHKPNAPREMERIYRHDGMVTWEGFECSRGLQIEGTGVYRINGSLAVARAIGDIDYRPWLSAEVEIKTIDLKRETDQFVILASDGLWDVMSSEEAVQYVHAVMGGAMGS 280          
BLAST of NO02G00890 vs. NCBI_GenBank
Match: GBG28784.1 (Protein phosphatase 1A [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 227.3 bits (578), Expect = 1.100e-55
Identity = 132/245 (53.88%), Postives = 161/245 (65.71%), Query Frame = 0
Query:  231 MEDDFFISKDGSFSGVYDGHGGAAVSKYLRQNLNAQFLTALPDEDTTKLSDEVVAE----------ALTQAFRVVDDAVLKVRHWSYMGSTAVAVVIHAQGQGEGQPAKRTLISANVGDSRAVLSRRGKAMDLTEDHKPNKPSELERVKALGGTVRWYGLLEQDGAPMEGMGVYRINGNLAVARAFGDRSERPFVSSEVE-VKMVPVEDGDEFVILATDGLWDVMTSEDAVAFVHSVMSASVGAL 465
            MED++FIS D SF GV+DGHGGA VSKY+R++L  +     P E      DE VAE          AL QAF  V   +L+   +   GSTAV V++   G+ E       L S N+GDSRAVL R G+A+DLTEDHKPN P E  R++ LGG VRWYG L  D  P++GMG YRINGNLAV+RAFGDR E P+VS E + V+     DGD F+ILA+DGLWDVMTS++AV FV  VM+ SVGAL
Sbjct:    1 MEDEYFISPDESFFGVFDGHGGAKVSKYVRRHLYDKLQAWNPGE----TKDEGVAEKGNAGSWPEAALRQAFAEVSRGILENNKFDMQGSTAVTVLL---GRDE-------LWSTNLGDSRAVLCRDGEAVDLTEDHKPNSPEEKSRIENLGGNVRWYGYLGPDRQPVQGMGAYRINGNLAVSRAFGDRLETPYVSDEPDVVRFDRDHDGDRFIILASDGLWDVMTSQEAVKFVTQVMTGSVGAL 231          
BLAST of NO02G00890 vs. NCBI_GenBank
Match: XP_009517599.1 (hypothetical protein PHYSODRAFT_538348 [Phytophthora sojae] >EGZ30324.1 hypothetical protein PHYSODRAFT_538348 [Phytophthora sojae])

HSP 1 Score: 218.8 bits (556), Expect = 3.800e-53
Identity = 118/263 (44.87%), Postives = 153/263 (58.17%), Query Frame = 0
Query:  215 GPYTTSVVAFKGQRSYMEDDFFISKDGSFSGVYDGHGGAAVSKYLRQNLNAQFLTALPDEDTTKLSD--------------EVVAEALTQAFRVVDDAVLKVRHWSYMGSTAVAVVIHAQGQGEGQPAKRTLISANVGDSRAVLSRRGKAMDLTEDHKPNKPSELERVKALGGTVRWYGLLEQDGAPMEGMGVYRINGNLAVARAFGDRSERPFVSSEVEVKMVPVE-DGDEFVILATDGLWDVMTSEDAVAFVHSVMSASVG 463
            G    S  A +G R+YMED  ++S    F+ VYDGHGG+AVS+YLR  L +     L   D   L++              + VA  L +A   +D  V+    W + GSTAV V++              L S NVGDSRAVL R G A+DLT DHKPN P E  R+++LGG V+WYG ++  G P+E  G YR+NGNLAVARA GDR  RPFV  E E++   +E D DEF+++A+DGLWDV TS + V FV  VMS  +G
Sbjct:  143 GKMVVSTAAVRGDRAYMEDTSYVSSCKRFAAVYDGHGGSAVSQYLRNQLFSMIAPELVQLDQEILAENKGEKSVMAKSSRRQKVATMLQEAVSKLDQEVIVKNEWKFQGSTAVGVLLFDD----------VLYSLNVGDSRAVLCRSGDAVDLTRDHKPNDPQERARIESLGGRVQWYGYVDAQGEPIEPYGAYRVNGNLAVARAIGDRDSRPFVIGEAEIRQYDLEYDKDEFIVIASDGLWDVFTSSEVVEFVQDVMSGELG 395          
BLAST of NO02G00890 vs. NCBI_GenBank
Match: XP_002907240.1 (protein phosphatase, putative [Phytophthora infestans T30-4] >EEY63804.1 protein phosphatase, putative [Phytophthora infestans T30-4])

HSP 1 Score: 218.8 bits (556), Expect = 3.800e-53
Identity = 117/263 (44.49%), Postives = 153/263 (58.17%), Query Frame = 0
Query:  215 GPYTTSVVAFKGQRSYMEDDFFISKDGSFSGVYDGHGGAAVSKYLRQNLNAQFLTALPDEDTTKLSD--------------EVVAEALTQAFRVVDDAVLKVRHWSYMGSTAVAVVIHAQGQGEGQPAKRTLISANVGDSRAVLSRRGKAMDLTEDHKPNKPSELERVKALGGTVRWYGLLEQDGAPMEGMGVYRINGNLAVARAFGDRSERPFVSSEVEVKMVPVE-DGDEFVILATDGLWDVMTSEDAVAFVHSVMSASVG 463
            G    S  A +G R+YMED  ++S    F+ VYDGHGGAAVS++LR  L +     L   D   L++              + VA+ L    + +D  V+    W + GSTAV V++           +  L S NVGDSRAVL R G  +DLT DHKPN P E  R+++LGG V+WYG ++  G P+E  G YR+NGNLAVARA GDR  RPFV  E E++   +E D DEF++LA+DGLWDV TS + V FV  VMS  +G
Sbjct:  141 GKMVVSTAAVRGDRAYMEDTSYVSSCKRFAAVYDGHGGAAVSQFLRNQLFSMISPELAQLDLQILAENKEENNVAAKSSRRQKVADLLRDTVQKLDQEVIAKNEWKFQGSTAVGVLLF----------EDVLYSLNVGDSRAVLCRGGNTVDLTRDHKPNDPQERARIESLGGRVQWYGYVDAQGEPIEPYGAYRVNGNLAVARAIGDRDSRPFVIGEAEIRQYDIEYDKDEFIVLASDGLWDVFTSSEVVEFVQDVMSGELG 393          
BLAST of NO02G00890 vs. NCBI_GenBank
Match: XP_024583902.1 (protein [Plasmopara halstedii] >CEG47533.1 protein [Plasmopara halstedii])

HSP 1 Score: 218.8 bits (556), Expect = 3.800e-53
Identity = 115/263 (43.73%), Postives = 153/263 (58.17%), Query Frame = 0
Query:  215 GPYTTSVVAFKGQRSYMEDDFFISKDGSFSGVYDGHGGAAVSKYLRQNLNAQFLTALPDEDTTKLSD--------------EVVAEALTQAFRVVDDAVLKVRHWSYMGSTAVAVVIHAQGQGEGQPAKRTLISANVGDSRAVLSRRGKAMDLTEDHKPNKPSELERVKALGGTVRWYGLLEQDGAPMEGMGVYRINGNLAVARAFGDRSERPFVSSEVEVKMVPVE-DGDEFVILATDGLWDVMTSEDAVAFVHSVMSASVG 463
            G    S  A +G R YMED  ++S    F+ VYDGHGG+AVS+YLR  L +     L   D   L++              + +A  L  A   +D  V+    W + GSTAV V++              L S NVGDSRAVL R G A++LT DHKPN P E  R+++LGG V+W+G ++  G P+E  G YR+NGNLAVARA GDR  RPFV+ E E++   +E D DEF+++A+DGLWDV TS + + FVH VMS  +G
Sbjct:  141 GKMVVSTAAVRGDRPYMEDTSYVSSCKRFAAVYDGHGGSAVSQYLRNQLYSMISPELSHLDQEILAENKEENNVKGKLSRRQKIATMLHDAIHKLDQDVIAKSEWKFQGSTAVGVLLFDD----------VLYSLNVGDSRAVLCRAGNAVELTRDHKPNDPQERARIESLGGRVQWFGYVDAQGEPIEPYGAYRVNGNLAVARAIGDRDSRPFVNGEAEIRQYDIEYDKDEFIVIASDGLWDVFTSSEVIEFVHDVMSGELG 393          
BLAST of NO02G00890 vs. NCBI_GenBank
Match: XP_009843527.1 (hypothetical protein H257_16702 [Aphanomyces astaci] >ETV67010.1 hypothetical protein H257_16702 [Aphanomyces astaci])

HSP 1 Score: 218.0 bits (554), Expect = 6.500e-53
Identity = 117/249 (46.99%), Postives = 155/249 (62.25%), Query Frame = 0
Query:  216 PYTTSVVAFKGQRSYMEDDFFISKDGSFSGVYDGHGGAAVSKYLRQNLNAQFLTAL-PDEDTTKLSDEVVAEALTQAFRVVDDAVLKVRHWSYMGSTAVAVVIHAQGQGEGQPAKRTLISANVGDSRAVLSRRGKAMDLTEDHKPNKPSELERVKALGGTVRWYGLLEQDGAPMEGMGVYRINGNLAVARAFGDRSERPFVSSEVEVKMVPVEDGDEFVILATDGLWDVMTSEDAVAFVHSVMSASVGA 464
            P   S  A +G R  MED  FI+ +  F+ V+DGHGGA VS YL++ L    +  L P +DT  L +  +  +L  AFR VD A+LK R W   GSTA AV++              + S NVGDSRAVL R G+A++LT DHKPN P E  RV+  GG V W+GL +  G P+  MG YRIN NLAVARA GD  +RP+VS E+E+K    +  D+F+++A+DGLWDV TS + V FVH+V++  VG+
Sbjct:   92 PLLVSSSAVRGDRPTMEDALFIAPNQRFTAVFDGHGGANVSSYLKETLYDHIVANLGPHKDTWSLDE--IESSLRDAFRAVDAAILKRREWITQGSTATAVLL----------VDDLIWSMNVGDSRAVLCRHGRALNLTRDHKPNDPMERLRVEGAGGRVHWHGLRDPRGHPIADMGAYRINSNLAVARALGDGDQRPYVSGEMELKCFRRDPSDKFIVVASDGLWDVFTSAEVVTFVHNVLAGEVGS 328          
BLAST of NO02G00890 vs. NCBI_GenBank
Match: XP_008896760.1 (hypothetical protein PPTG_05043 [Phytophthora parasitica INRA-310] >ETI34623.1 hypothetical protein F443_18912 [Phytophthora parasitica P1569] >ETN17173.1 hypothetical protein PPTG_05043 [Phytophthora parasitica INRA-310] >ETP04520.1 hypothetical protein F441_18725 [Phytophthora parasitica CJ01A1] >ETP32666.1 hypothetical protein F442_18695 [Phytophthora parasitica P10297] >KUG00918.1 protein phosphatase 2C 71 [Phytophthora nicotianae])

HSP 1 Score: 217.2 bits (552), Expect = 1.100e-52
Identity = 117/263 (44.49%), Postives = 151/263 (57.41%), Query Frame = 0
Query:  215 GPYTTSVVAFKGQRSYMEDDFFISKDGSFSGVYDGHGGAAVSKYLRQNLNAQFLTALPDEDTTKLSD--------------EVVAEALTQAFRVVDDAVLKVRHWSYMGSTAVAVVIHAQGQGEGQPAKRTLISANVGDSRAVLSRRGKAMDLTEDHKPNKPSELERVKALGGTVRWYGLLEQDGAPMEGMGVYRINGNLAVARAFGDRSERPFVSSEVEVKMVPVE-DGDEFVILATDGLWDVMTSEDAVAFVHSVMSASVG 463
            G    S  A +G R+YMED  ++S    F+ VYDGHGG+AVS+YLR  L +     L   D   L++              + V   L  A R +D  V+    W + GSTAV V++              L S NVGDSRAVL R G  ++LT DHKPN P E  R+++LGG V+WYG ++  G P+E  G YR+NGNLAVARA GDR  RPFV  E E++   +E D DEF+++A+DGLWDV TS + V FV  VMS  VG
Sbjct:  141 GNMVVSTAAVRGDRAYMEDTSYVSSCKRFAAVYDGHGGSAVSQYLRNQLFSMISPELAQLDQQILAENKEANNVAAKSSRRQKVEAVLRDAVRKLDQEVIAKNEWKFQGSTAVGVLLFDD----------VLYSLNVGDSRAVLCRGGNTVELTRDHKPNDPQERARIESLGGRVQWYGYVDAQGDPIEPYGAYRVNGNLAVARAIGDRDSRPFVIGEAEIRQYDIEYDKDEFIVIASDGLWDVFTSSEVVEFVQDVMSGEVG 393          
BLAST of NO02G00890 vs. NCBI_GenBank
Match: ETK74965.1 (hypothetical protein L915_18344 [Phytophthora parasitica] >ETL28388.1 hypothetical protein L916_18249 [Phytophthora parasitica])

HSP 1 Score: 217.2 bits (552), Expect = 1.100e-52
Identity = 117/263 (44.49%), Postives = 151/263 (57.41%), Query Frame = 0
Query:  215 GPYTTSVVAFKGQRSYMEDDFFISKDGSFSGVYDGHGGAAVSKYLRQNLNAQFLTALPDEDTTKLSD--------------EVVAEALTQAFRVVDDAVLKVRHWSYMGSTAVAVVIHAQGQGEGQPAKRTLISANVGDSRAVLSRRGKAMDLTEDHKPNKPSELERVKALGGTVRWYGLLEQDGAPMEGMGVYRINGNLAVARAFGDRSERPFVSSEVEVKMVPVE-DGDEFVILATDGLWDVMTSEDAVAFVHSVMSASVG 463
            G    S  A +G R+YMED  ++S    F+ VYDGHGG+AVS+YLR  L +     L   D   L++              + V   L  A R +D  V+    W + GSTAV V++              L S NVGDSRAVL R G  ++LT DHKPN P E  R+++LGG V+WYG ++  G P+E  G YR+NGNLAVARA GDR  RPFV  E E++   +E D DEF+++A+DGLWDV TS + V FV  VMS  VG
Sbjct:  141 GNMVVSTAAVRGDRAYMEDTSYVSSCKRFAAVYDGHGGSAVSQYLRNQLFSMISPELAQLDQQILAENKEANNVAAKSSRRQKVEAVLRDAVRKLDQEVIAKNEWKFQGSTAVGVLLFDD----------VLYSLNVGDSRAVLCRGGNTVELTRDHKPNDPQERARIESLGGRVQWYGYVDAQGDPIEPYGAYRVNGNLAVARAIGDRDSRPFVIGEAEIRQYDIEYDKDEFIVIASDGLWDVFTSSEVVEFVQDVMSGEVG 393          
BLAST of NO02G00890 vs. NCBI_GenBank
Match: ETL81650.1 (hypothetical protein L917_18069 [Phytophthora parasitica])

HSP 1 Score: 217.2 bits (552), Expect = 1.100e-52
Identity = 117/263 (44.49%), Postives = 151/263 (57.41%), Query Frame = 0
Query:  215 GPYTTSVVAFKGQRSYMEDDFFISKDGSFSGVYDGHGGAAVSKYLRQNLNAQFLTALPDEDTTKLSD--------------EVVAEALTQAFRVVDDAVLKVRHWSYMGSTAVAVVIHAQGQGEGQPAKRTLISANVGDSRAVLSRRGKAMDLTEDHKPNKPSELERVKALGGTVRWYGLLEQDGAPMEGMGVYRINGNLAVARAFGDRSERPFVSSEVEVKMVPVE-DGDEFVILATDGLWDVMTSEDAVAFVHSVMSASVG 463
            G    S  A +G R+YMED  ++S    F+ VYDGHGG+AVS+YLR  L +     L   D   L++              + V   L  A R +D  V+    W + GSTAV V++              L S NVGDSRAVL R G  ++LT DHKPN P E  R+++LGG V+WYG ++  G P+E  G YR+NGNLAVARA GDR  RPFV  E E++   +E D DEF+++A+DGLWDV TS + V FV  VMS  VG
Sbjct:  141 GNMVVSTAAVRGDRAYMEDTSYVSSCKRFAAVYDGHGGSAVSQYLRNQLFSMISPELAQLDQQILAENKEANNVAAKSSRRQKVEAVLRDAVRKLDQEVIAKNEWKFQGSTAVGVLLFDD----------VLYSLNVGDSRAVLCRGGNTVELTRDHKPNDPQERARIESLGGRVQWYGYVDAQGDPIEPYGAYRVNGNLAVARAIGDRDSRPFVIGEAEIRQYDIEYDKDEFIVIASDGLWDVFTSSEVVEFVQDVMSGEVG 393          
The following BLAST results are available for this feature:
BLAST of NO02G00890 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30591.11.100e-11383.08Protein phosphatase 2C, manganese/magnesium aspart... [more]
CBN74003.17.600e-6253.36conserved unknown protein [Ectocarpus siliculosus][more]
GBG28784.11.100e-5553.88Protein phosphatase 1A [Aurantiochytrium sp. FCC13... [more]
XP_009517599.13.800e-5344.87hypothetical protein PHYSODRAFT_538348 [Phytophtho... [more]
XP_002907240.13.800e-5344.49protein phosphatase, putative [Phytophthora infest... [more]
XP_024583902.13.800e-5343.73protein [Plasmopara halstedii] >CEG47533.1 protein... [more]
XP_009843527.16.500e-5346.99hypothetical protein H257_16702 [Aphanomyces astac... [more]
XP_008896760.11.100e-5244.49hypothetical protein PPTG_05043 [Phytophthora para... [more]
ETK74965.11.100e-5244.49hypothetical protein L915_18344 [Phytophthora para... [more]
ETL81650.11.100e-5244.49hypothetical protein L917_18069 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006687NSK006687Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G00890.1NO02G00890.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|652729gene_666Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100033g27gene100Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G00890.1NO02G00890.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G00890 ID=NO02G00890|Name=NO02G00890|organism=Nannochloropsis oceanica|type=gene|length=2743bp
CATTTTTTGCAAGACCATGAGATTCATGAACAACGGCAATCGCAACCTCC
ACCGCACAGTAGACTCCTTTCTATTGAAATAGCTCTGCCGCATGCCTGAA
AACGCCCGCACCACCAACAGTCCAGGTGTAAGCTTGCTCGTGTGTTGGGT
GCGAGTGATGTCGGGAGGTTTTGGCCAGCCGTGGGGCTGTAATACCAAAT
TGATGATGAAAAGAAGGAAGCCGAGCTTGGAAGGCACTTGGAAGGCAACA
TCAATCCAAGGACAACTTAGCCTGTCCCGTTGCCCACACAAATAAACGTG
CCAACCGCCTCTAAACATCATATCGCACAGGGAGACATTCTCAACCCCGG
TCGCGATCTGCTGCCGTTGTTGCCCCGTCCCCTGTTGACGTCTCCCCCTC
CCACCTCCTCCGTCTACAACATCGCAGCAGCACAGGCGGCGTCTTGCGTC
GTAAAAGGAGAAGCAGATCACGCGCTTGGGCGTGCCTGTGTGTGTGTGTG
CGTGCGTGTGTGTGTGTGTGCGTGTGTGTGGTGGGGTAGATTGCAAGGAC
CTCTTTTGTGCTCTTCTCCTCGCCCACAACCCTAACCCCAGTCTGTGCTT
AGACTAGAGGACCTGGGTCTTGATGATCCTCCGGCGGTTTCCGAGGCATC
AACACCACCAGCACCGCCGCCAGCAGCTTGCCAACATTGGTTCGATCTCA
GGTATCACTAGCAGCAGCCTCAGCAGGAGCATTCCGCGCAGCAGCGACAA
CAGTTTCAGCACCAATACCAGCAGCGCAGGAGTCCGTCGACTCCTCTCTC
CTTCCACCGCCAACACAAGCATGCACTTTTACTACAATGCCCTAGGCGGA
GGCGGTTCCAATCGTCGATCAATCTTCACAACCGCGGCAGCCCTTGCCTC
CGCATACTATATGGGTGGCCTCGCCCGTGGCTCTGCCTCTGCGGCGTGCG
AGGCACCTTTACCCCCCTCTTCTCCCCCATCCTCCTCCTCCTCATCCTCC
TCCTCCTCCTCCTCATCGTCATCATCATCATCATCGTCGTCGTCGTCGTC
ATCATCCAGCACCACAAATAATGCCCCACCCACGTTCATAAAATTTCCCA
TTCGGCGCGACAGCAATCACGGCAATAGCACCGGAAGAGGGGCCGCCTCG
GCGACCACTCTCTACCCCGGTAGCGGCCAGTCCACCCGCTCCTCCTCCTC
CACCACCACCACCTCCCCGGCCTCTTCATCCTCCATGGGCAGCGGCAGTA
TGGGAATTATTGGCGGCCCCTATACCACGTCAGTTGTTGCCTTCAAGGGC
CAACGATCTTACATGGAAGATGATTTTTTCATTAGTAAAGACGGGAGCTT
TAGTGGGGTCTATGACGGGCATGGGGGGGCGGCCGTGTCAAAATATTTGC
GGCAGAATCTGAATGCCCAGTTCTTGACGGCCTTGCCAGACGAGGACACG
ACCAAATTGAGCGATGAGGTGGTTGCCGAAGCGCTGACGCAAGCCTTTCG
CGTGGTGGATGACGCGGTCCTTAAAGTCAGGCATTGGTCGTACATGGGCT
CCACAGCTGTGGCCGTTGTGATTCATGCCCAGGGTCAGGGGGAAGGACAG
CCGGCGAAACGAACGTTAATCAGTGCCAATGTTGGTGATTCCCGCGCGGT
GTTGAGTAGGAGAGGGAAGGCAATGGACCTGACAGAGGATCATAAGCCGA
ACAAACCCAGTGAATTGGAGAGGGTGAAGGCGTTGGGGGGGACGGTAAGG
TGGTATGGATTATTGGAGCAGGATGGGGCGCCGATGGAGGGCATGGGCGT
GTACCGGATAAATGGGAATCTGGCGGTGGCACGGGCGTTTGGAGACAGGA
GTGAGAGGCCATTTGTGTCAAGTGAGGTGGAGGTGAAGATGGTGCCGGTT
GAAGACGGGGATGAGTTTGTGATTCTGGCGACGGATGGGCTGTGGGATGT
GATGACTTCGGAAGATGCCGTGGCGTTTGTGCATTCAGTGATGAGTGCGA
GTGTAGGAGCATTGACTGAGGGAGGAGGGGAGGGAGGGGGAGGAGTAGGA
GGGGGGGGGGGGAGCCGGCTGGGCAGCGTGTGGCAGACATGAAAATTTTT
GATTGGACGAAGCAGCATGCGAATGACCGGGGGATTATTCGAGCAGCGAT
GATGGCGAGGAAGAAGAAAATGGCCAGGTACTTGAGTGAGGAGGCCTTCA
GGAGGGGAACATCTGACAATGTGACTGTGGTAGTGGTATGGTTCTGAAGT
CTGAGTTGAAAGAAATGTGGGACGGAGAGAAGGGGGATAAGTAGAATAAA
AGAGAAGGGAAATGCAGGGGAAAATCACACAGCAGATGGGTAGTTACACC
AGCGGCTGGTGGAGAGAAGAACAAATGCGTTGGGTTAGGGTTACCTGGAT
GCGTAAAGCCGCAGCAGCAGCAGCAGCAGCAACAACAACAACAACAACAA
CAACAACAACAACAACAACAACAACAACAACAACAACAACAGCAACAGTA
GAAGCCGAGGAAATCTCAAGCAGCAATAATGGTAGGATGGAAATTAAGCG
CGAGAAGAAGGCGGAGGCACGCTCCGTCGCAGCGGCAGGAAAGACAGTGG
AGAAGCGCGGACGAAGCTTGGATACGGCCATCTATGGCTCATGTGAGATG
TAAACAAAACAGGGAGATGGATCTCCCCTACGCTTTGGAATTGGACCAGC
CAGCCCACAAAAGGAGAAATCCACGACAACCCCAAATAGCACA
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protein sequence of NO02G00890.1

>NO02G00890.1-protein ID=NO02G00890.1-protein|Name=NO02G00890.1|organism=Nannochloropsis oceanica|type=polypeptide|length=490bp
MILRRFPRHQHHQHRRQQLANIGSISGITSSSLSRSIPRSSDNSFSTNTS
SAGVRRLLSPSTANTSMHFYYNALGGGGSNRRSIFTTAAALASAYYMGGL
ARGSASAACEAPLPPSSPPSSSSSSSSSSSSSSSSSSSSSSSSSSSTTNN
APPTFIKFPIRRDSNHGNSTGRGAASATTLYPGSGQSTRSSSSTTTTSPA
SSSSMGSGSMGIIGGPYTTSVVAFKGQRSYMEDDFFISKDGSFSGVYDGH
GGAAVSKYLRQNLNAQFLTALPDEDTTKLSDEVVAEALTQAFRVVDDAVL
KVRHWSYMGSTAVAVVIHAQGQGEGQPAKRTLISANVGDSRAVLSRRGKA
MDLTEDHKPNKPSELERVKALGGTVRWYGLLEQDGAPMEGMGVYRINGNL
AVARAFGDRSERPFVSSEVEVKMVPVEDGDEFVILATDGLWDVMTSEDAV
AFVHSVMSASVGALTEGGGEGGGGVGGGGGSRLGSVWQT*
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Synonyms
Publications