NO02G00860, NO02G00860 (gene) Nannochloropsis oceanica

Overview
NameNO02G00860
Unique NameNO02G00860
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2675
Alignment locationchr2:276687..279361 +

Link to JBrowse

Properties
Property NameValue
DescriptionDynein regulatory complex protein 1
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:276687..279361 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR029440DRC1_C
Vocabulary: Biological Process
TermDefinition
GO:0070286axonemal dynein complex assembly
Vocabulary: Cellular Component
TermDefinition
GO:0005858axonemal dynein complex
Homology
BLAST of NO02G00860 vs. NCBI_GenBank
Match: XP_018931802.1 (PREDICTED: dynein regulatory complex protein 1 isoform X1 [Cyprinus carpio] >XP_018931803.1 PREDICTED: dynein regulatory complex protein 1 isoform X2 [Cyprinus carpio])

HSP 1 Score: 119.8 bits (299), Expect = 4.300e-23
Identity = 87/341 (25.51%), Postives = 169/341 (49.56%), Query Frame = 0
Query:   77 ADRRSQNEEIDRRWEHLLLTSSVPPDQIQTSSDGSSAKIIE-----NDSKDSIPLLELYRELEAQRGACTAMLQSKNDLIQEAQAQLTEHEEEYVQAISRYGLEIENMVLKMRADSKALQDHYEREMDALEATFVTEREGMQQAHQITMDGLVAQQKAADLRHSQDAQEGEERFQRELEALRVQDGEDYHQLQIRLEMERDAADRQVEEVMTTTQVQQEKLVHDHRILTDREVEKSASLAAQKMKLVKLRDSVLALTSEYKEHDAREKKRFEELTQEVCRLHKKYKDLQQRFRHFSCADRDRYDSAWARHEDEIQAAVEKVLAIDELLFVQLLGQEWTPPP 413
            +DRR++ EE  R          +  ++++  +  S  K  E      D+K     L+L   + +Q+  C  +L  KN LI E Q +L   ++ YV+ + R   +I+ ++ +M     +L+  Y  ++  +E +F  ER  +   H+      + +Q   +LR+        E  +  L+ LRV   E+Y+  +IR++ E     ++++EV     + +EKL + + +L  RE E +   +  K K+++++D +  L S+    + + K   + L  +  R+ ++Y D+Q++ RHF+  D +R++  W  +EDE++A   +VL  D ++  Q LG  W  PP
Sbjct:   98 SDRRTELEEACR----------LRREKLENEAKSSQEKFEEITRKWTDAKMKQTPLDLRDAMNSQQQLCEQILGDKNKLISELQQELKASDDHYVKDLKRQAKDIDLLIERMEEQISSLKKSYREDLQQIENSFDEERRTLLTKHRKKWGHQMKEQSEKELRNMMQGLSLLEEHEDLLQKLRVWKAEEYNTDKIRMDTEVQNLRKKLQEVKFNCHLNEEKLDYKYEVLKKREEENAILKSHLKRKIIRMQDVLNNLKSKCASQEKQLKTEEQSLRNDYTRIKQQYIDMQKKARHFAALDAERFEKLWLINEDEVKALAHRVLETDRIIHEQQLGLAWVSPP 428          
BLAST of NO02G00860 vs. NCBI_GenBank
Match: XP_007898606.1 (PREDICTED: dynein regulatory complex protein 1 [Callorhinchus milii])

HSP 1 Score: 118.6 bits (296), Expect = 9.500e-23
Identity = 74/284 (26.06%), Postives = 149/284 (52.46%), Query Frame = 0
Query:  128 ELYRELEAQRGACTAMLQSKNDLIQEAQAQLTEHEEEYVQAISRYGLEIENMVLKMRADSKALQDHYEREMDALEATFVTEREGMQQAHQITMDGLVAQQKAADLRHSQDAQEGEERFQRELEALRVQDGEDYHQLQIRLEMERDAADRQVEEVMTTTQVQQEKLVHDHRILTDREVEKSASLAAQKMKLVKLRDSVLALTSEYKEHDAREKKRFEELTQEVCRLHKKYKDLQQRFRHFSCADRDRYDSAWARHEDEIQAAVEKVLAIDELLFVQLLGQEWTPP 412
            +LY  L +Q+  CT ++Q KN LI E Q +L   ++ YV+ + +   +IE +  +M                        ER G+Q+ +     G +  ++  ++ +     E  E ++ +L+  RVQD E+Y+ ++I+LE + +  ++Q++++  T Q+ QEKL +++++L  R+ E   + + QK ++ + +D++  L S+  + +   ++  + LT    R+ ++YKD+Q + RHF+  D   ++  W  +E E++  V+K L  D ++  Q LG  W  P
Sbjct:  142 DLYDLLISQQKQCTELIQDKNKLINELQQELKLKDDHYVKDLRKASEDIELLAERMEXXXXXXXXXXXXXXXXXXXXXQMERHGLQRNNFWDWKGAMQTRRDKEIDYLMTRLEKVEEYEEQLQEFRVQDAEEYNMIKIKLENDVEMLEQQLQQMRATFQLNQEKLEYNYQVLKKRDEENMITKSQQKRRITRQQDTLNRLKSKLAKQEKMYQEENQTLTDGYNRVVEQYKDIQSKIRHFAAVDAKNFEDVWLMNEGEVKELVQKALEADRIIHEQQLGLCWKKP 425          
BLAST of NO02G00860 vs. NCBI_GenBank
Match: XP_018430142.1 (PREDICTED: dynein regulatory complex protein 1, partial [Nanorana parkeri])

HSP 1 Score: 118.6 bits (296), Expect = 9.500e-23
Identity = 75/284 (26.41%), Postives = 149/284 (52.46%), Query Frame = 0
Query:  128 ELYRELEAQRGACTAMLQSKNDLIQEAQAQLTEHEEEYVQAISRYGLEIENMVLKMRADSKALQDHYEREMDALEATFVTEREGMQQAHQITMDGLVAQQKAADLRHSQDAQEGEERFQRELEALRVQDGEDYHQLQIRLEMERDAADRQVEEVMTTTQVQQEKLVHDHRILTDREVEKSASLAAQKMKLVKLRDSVLALTSEYKEHDAREKKRFEELTQEVCRLHKKYKDLQQRFRHFSCADRDRYDSAWARHEDEIQAAVEKVLAIDELLFVQLLGQEWTPP 412
            EL+  L +Q+  C  +++ KN LI E Q +L   +++YV+ + +   +I+ +        K+L   Y  E+   E  F  ER  +    +   +  +  +   +L    +  +  E ++++L  LRVQDGE+Y  ++I+LE +     +Q++ +  T Q+ QEKL +++++L  R+ E + + + QK ++ +L D +  L  +  +   + K+  + LT +  R  ++YK++Q++ RHF+  D  ++   W  +E+EI+  V + L  D ++  Q LG  W  P
Sbjct:   33 ELWALLNSQQQQCAQLIEDKNKLIGELQQELKRKDDQYVKDLKKQAEDIDLLXXXXXXXXKSLMKTYREELLHTEKAFEQERRELLDVSKKKWEQTMQGRWDKELESLLNRMKKVEEYEKQLNQLRVQDGEEYTMIKIKLETDVQILQQQLQHIKATFQLNQEKLEYNYQVLKKRDEENTITKSQQKRRITRLHDVLNNLRIKLDKQIKQYKEENQSLTDDFKRNVEQYKEVQKKMRHFAAVDAKKFHDIWVMNEEEIKQLVLRALEADRIIQEQQLGLPWIAP 316          
BLAST of NO02G00860 vs. NCBI_GenBank
Match: XP_014000687.1 (PREDICTED: dynein regulatory complex protein 1 [Salmo salar])

HSP 1 Score: 118.2 bits (295), Expect = 1.200e-22
Identity = 98/422 (23.22%), Postives = 202/422 (47.87%), Query Frame = 0
Query:   13 PMVD-ESPLKQIPQQVALYRAAFLARMQTSLEDVQALGQETDALK-----AQICQRNGRRADARMVLLQ------------GADRRSQNEEIDRRWEHLLLTSSVPPDQIQTSSDGSSAKIIENDSKDSIPLL-----ELYRELEAQRGACTAMLQSKNDLIQEAQAQLTEHEEEYVQAISRYGLEIENMVLKMRADSKALQDHYEREMDALEATFVTEREGMQQAHQITMDGLVAQQKAADLRHSQDAQEGEERFQRELEALRVQDGEDYHQLQIRLEMERDAADRQVEEVMTTTQVQQEKLVHDHRILTDREVEKSASLAAQKMKLVKLRDSVLALTSEYKEHDAREKKRFEELTQEVCRLHKKYKDLQQRFRHFSCADRDRYDSAWARHEDEIQAAVEKVLAIDELLFVQLLGQEWTPP 412
            P VD E+P     +++A  R    AR +      Q LG ++   K     A+  Q    +++ RM+ LQ             AD R+   + +    H L       ++++  +  S  K  E   K ++  +     +L   L +Q+  C  +++ KN LI+E Q ++   ++ YV+ + +   +++ M+ +M    K L   Y  E+D +E +F  ER+ +   ++   +  + +++  +L +     +  E ++  L+ LR +D E+Y+ ++I+L+ +    ++Q++++  T Q+              R+ E + + + QK K+ +L+D V  L  +    + + ++  + LT +  R+ ++YK +Q++ RHF+  D  +++  W  +E+E++A VEK L  D L+  Q LG  W  P
Sbjct:   16 PSVDSENP----EERIAARRLRIAARSEAKKR--QELGDDSHEKKEIKEEARKSQHQVEQSEKRMIKLQSDGTELVTNIQVAADSRASQRQTEVEEAHRLRV-----EKLENEAKSSLEKFEEITRKWTVAKMKEIPQDLRDSLSSQQQLCALLIEDKNKLIKELQQEMKLSDDRYVKDLKKQAEDVDLMIERMEDQVKFLMGSYRNELDQIENSFEHERKILLTGNRKKWEQYMKERRDKELENVMQRMKRVEEYEVLLQQLRTEDAEEYNMIKIKLDTDVQILEQQLQQMKATYQLNXXXXXXXXXXXXKRDEENTITKSQQKRKITRLQDVVNNLKIKCANQEKQSREENQNLTDDYTRIMQQYKHMQKKMRHFAAIDAKKFEEVWLMNEEEVKALVEKALDTDRLVHEQQLGLAWQRP 426          
BLAST of NO02G00860 vs. NCBI_GenBank
Match: XP_016391594.1 (PREDICTED: LOW QUALITY PROTEIN: dynein regulatory complex protein 1-like [Sinocyclocheilus rhinocerous])

HSP 1 Score: 118.2 bits (295), Expect = 1.200e-22
Identity = 87/335 (25.97%), Postives = 166/335 (49.55%), Query Frame = 0
Query:   83 NEEIDRRWEHLLLTSSVPPDQIQTSSDGSSAKIIE-----NDSKDSIPLLELYRELEAQRGACTAMLQSKNDLIQEAQAQLTEHEEEYVQAISRYGLEIENMVLKMRADSKALQDHYEREMDALEATFVTEREGMQQAHQITMDGLVAQQKAADLRHSQDAQEGEERFQRELEALRVQDGEDYHQLQIRLEMERDAADRQVEEVMTTTQVQQEKLVHDHRILTDREVEKSASLAAQKMKLVKLRDSVLALTSEYKEHDAREKKRFEELTQEVCRLHKKYKDLQQRFRHFSCADRDRYDSAWARHEDEIQAAVEKVLAIDELLFVQLLGQEWTPPP 413
            + E DRR E L     +  + ++  +  S  K  E      D+K     L+L   L +Q+  C  +L  KN LI E Q +L   ++ YV+ + +   +I+ ++ +M     +L+  Y  ++  +E +F  ER  +   H+      + ++   +LR+        E  +  L+ LRV   E+Y+  +IR++ E     ++++EV     + +EKL + + +L  RE E +   +  K K+++++D +  L S+    + + K   + L  +  R+ ++YKD+Q++ RHF+  D +R++  W   EDE++A   +VL  D ++  Q LG  W  PP
Sbjct:   95 SRESDRRTE-LEEACRLRRENLENEAKSSQEKFGEITRKWTDAKMKQTPLDLRDALNSQQQLCEQILADKNKLISELQRELKASDDHYVKDLKKQAKDIDLLIDRMEEQISSLKKSYREDLQQIENSF-DERRTLLTKHRKKWGHQMKERSKKELRNMMQGLSLLEEHEDLLQKLRVWKAEEYNTDKIRMDTEVQNLRKKLQEVKFNCHLNEEKLDYKYEVLKKREEENAILKSHLKRKIIRMQDVLNNLKSKCANQEKQSKAEEQSLRNDYTRIRQQYKDMQKKARHFAALDAERFEKLWLISEDEVKALAHRVLETDRIIHEQQLGLAWVSPP 427          
BLAST of NO02G00860 vs. NCBI_GenBank
Match: XP_016351839.1 (PREDICTED: dynein regulatory complex protein 1-like [Sinocyclocheilus anshuiensis])

HSP 1 Score: 117.9 bits (294), Expect = 1.600e-22
Identity = 86/341 (25.22%), Postives = 167/341 (48.97%), Query Frame = 0
Query:   77 ADRRSQNEEIDRRWEHLLLTSSVPPDQIQTSSDGSSAKIIE-----NDSKDSIPLLELYRELEAQRGACTAMLQSKNDLIQEAQAQLTEHEEEYVQAISRYGLEIENMVLKMRADSKALQDHYEREMDALEATFVTEREGMQQAHQITMDGLVAQQKAADLRHSQDAQEGEERFQRELEALRVQDGEDYHQLQIRLEMERDAADRQVEEVMTTTQVQQEKLVHDHRILTDREVEKSASLAAQKMKLVKLRDSVLALTSEYKEHDAREKKRFEELTQEVCRLHKKYKDLQQRFRHFSCADRDRYDSAWARHEDEIQAAVEKVLAIDELLFVQLLGQEWTPPP 413
            +DRR++ EE  R          +  + ++  +  S  K  E      D+K     L+L   L +Q+  C  +L  KN LI E Q +L   ++ YV+ + R   +I+ ++ +M     +L+  Y  ++  +E +F  ER  +   H+      + ++   +LR+        E  +  L+ LRV   E+Y+  +IR++ E     ++++EV     + +EKL + + ++  RE E +   +  K K+++++D +  L S+    + + K   + L  +  R+ ++YKD+Q++  HF+  D +R++  W   EDE++A   +VL  D ++  Q LG  W  PP
Sbjct:   98 SDRRTELEEACR----------LRRENLENEAKSSQEKFGEITRKWTDAKMKQTPLDLRDALNSQQQLCEQILADKNKLISELQQELKASDDHYVKDLKRQAKDIDLLIDRMEEQISSLKKSYREDLQQIENSFDEERRTLLTKHRKKWGHQMKERSEKELRNMMQGLSLLEEHEDLLQKLRVWKAEEYNTDKIRMDTEVQNLRKKLQEVKFNCHLNEEKLDYKYEVVKKREEENAILKSHLKRKIIRMQDVLNNLKSKCANQEKQSKAEEQSLRNDYTRIKQQYKDMQKKAGHFAALDAERFEKLWLISEDEVKALAHRVLETDRIIHEQQLGLAWVSPP 428          
BLAST of NO02G00860 vs. NCBI_GenBank
Match: EMP23691.1 (hypothetical protein UY3_19251 [Chelonia mydas])

HSP 1 Score: 117.5 bits (293), Expect = 2.100e-22
Identity = 75/284 (26.41%), Postives = 149/284 (52.46%), Query Frame = 0
Query:  128 ELYRELEAQRGACTAMLQSKNDLIQEAQAQLTEHEEEYVQAISRYGLEIENMVLKMRADSKALQDHYEREMDALEATFVTEREGMQQAHQITMDGLVAQQKAADLRHSQDAQEGEERFQRELEALRVQDGEDYHQLQIRLEMERDAADRQVEEVMTTTQVQQEKLVHDHRILTDREVEKSASLAAQKMKLVKLRDSVLALTSEYKEHDAREKKRFEELTQEVCRLHKKYKDLQQRFRHFSCADRDRYDSAWARHEDEIQAAVEKVLAIDELLFVQLLGQEWTPP 412
            +L+  L  Q+  C  +++ KN LI E Q +L   ++ YV+ + +   +I  +V +M    + L   Y RE+  +E  F  ER  +  +++   +  +    A +L +     +  E ++++L  L+V+D E+Y  ++I+LE +    ++Q++++    Q+ QEKL ++ ++L  R+ E +   + QK KL +L D +  L  +  +   + ++  + LT +  R+ ++YKDLQ+  RHF+  D  ++   W  +E+E +  + K L  D ++  Q LG  W  P
Sbjct:  220 DLWDVLNQQQQQCALLIEEKNKLISELQQELKSKDDHYVKDLKKQSDDINLLVERMEEQIRNLMKTYRRELTQIEKAFELERRELLSSNKKKWEQAMQAHNAQELENLITRMQTVEEYEKQLNQLQVKDAEEYATIKIQLENDVQILEQQLQQMKAIYQLNQEKLEYNFQVLKKRDEENTIIKSQQKRKLNRLHDVLNNLRIKLAKQIKQFQEENQNLTADYKRIVEQYKDLQRTMRHFAVVDAQKFLEIWLMNEEEAKGLMWKALEADRVIHTQQLGLPWVEP 503          
BLAST of NO02G00860 vs. NCBI_GenBank
Match: XP_007072668.1 (PREDICTED: dynein regulatory complex protein 1 [Chelonia mydas])

HSP 1 Score: 117.5 bits (293), Expect = 2.100e-22
Identity = 75/284 (26.41%), Postives = 149/284 (52.46%), Query Frame = 0
Query:  128 ELYRELEAQRGACTAMLQSKNDLIQEAQAQLTEHEEEYVQAISRYGLEIENMVLKMRADSKALQDHYEREMDALEATFVTEREGMQQAHQITMDGLVAQQKAADLRHSQDAQEGEERFQRELEALRVQDGEDYHQLQIRLEMERDAADRQVEEVMTTTQVQQEKLVHDHRILTDREVEKSASLAAQKMKLVKLRDSVLALTSEYKEHDAREKKRFEELTQEVCRLHKKYKDLQQRFRHFSCADRDRYDSAWARHEDEIQAAVEKVLAIDELLFVQLLGQEWTPP 412
            +L+  L  Q+  C  +++ KN LI E Q +L   ++ YV+ + +   +I  +V +M    + L   Y RE+  +E  F  ER  +  +++   +  +    A +L +     +  E ++++L  L+V+D E+Y  ++I+LE +    ++Q++++    Q+ QEKL ++ ++L  R+ E +   + QK KL +L D +  L  +  +   + ++  + LT +  R+ ++YKDLQ+  RHF+  D  ++   W  +E+E +  + K L  D ++  Q LG  W  P
Sbjct:  223 DLWDVLNQQQQQCALLIEEKNKLISELQQELKSKDDHYVKDLKKQSDDINLLVERMEEQIRNLMKTYRRELTQIEKAFELERRELLSSNKKKWEQAMQAHNAQELENLITRMQTVEEYEKQLNQLQVKDAEEYATIKIQLENDVQILEQQLQQMKAIYQLNQEKLEYNFQVLKKRDEENTIIKSQQKRKLNRLHDVLNNLRIKLAKQIKQFQEENQNLTADYKRIVEQYKDLQRTMRHFAVVDAQKFLEIWLMNEEEAKGLMWKALEADRVIHTQQLGLPWVEP 506          
BLAST of NO02G00860 vs. NCBI_GenBank
Match: XP_016093962.1 (PREDICTED: LOW QUALITY PROTEIN: dynein regulatory complex protein 1-like [Sinocyclocheilus grahami])

HSP 1 Score: 117.5 bits (293), Expect = 2.100e-22
Identity = 78/316 (24.68%), Postives = 159/316 (50.32%), Query Frame = 0
Query:  102 DQIQTSSDGSSAKIIE-----NDSKDSIPLLELYRELEAQRGACTAMLQSKNDLIQEAQAQLTEHEEEYVQAISRYGLEIENMVLKMRADSKALQDHYEREMDALEATFVTEREGMQQAHQITMDGLVAQQKAADLRHSQDAQEGEERFQRELEALRVQDGEDYHQLQIRLEMERDAADRQVEEVMTTTQVQQEKLVHDHRILTDREVEKSASLAAQKMKLVKLRDSVLALTSEYKEHDAREKKRFEELTQEVCRLHKKYKDLQQRFRHFSCADRDRYDSAWARHEDEIQAAVEKVLAIDELLFVQLLGQEWTPPP 413
            D+++  +  S  K  E      D+K     L+L   L +Q+  C  ++  KN LI E Q +L   ++ YV+ + +   +I+ ++ +M     +L+  Y  +++ +E +F  ER  +   H+      + ++   +L++        E  +  L+ LRVQ  E+Y+  +I+++ E     ++++EV     + +EKL + + +L  RE E +   +  K K+++++D +  L S+    + + K   + L  +  R+ ++YKD+Q++ RHF+  D +R++  W   E E++A   + L  D ++  Q LG  W  PP
Sbjct:  113 DKLENEAKSSQEKFEEITRKWTDAKMKQTPLDLRDALNSQQQLCEQIVADKNKLISELQQELKASDDRYVKDLKKQAKDIDLIIERMEEQISSLKKSYREDLEQIENSFDEERRTLLTKHRKKWGHQMKERSEKELKNMLQGLSLLEEHEDLLQKLRVQKAEEYNTDKIKMDTEVQNLRKKLQEVKFNCHLNEEKLDYKYEVLKKREEENTILKSQLKRKIIRMQDILNNLKSKCANQEKQSKAEEQSLRNDYARIKQQYKDMQKKARHFAVLDAERFEKIWLISEGEVKALAHRALETDRIIHEQQLGLAWVSPP 428          
BLAST of NO02G00860 vs. NCBI_GenBank
Match: XP_017573539.1 (PREDICTED: dynein regulatory complex protein 1 isoform X1 [Pygocentrus nattereri] >XP_017573540.1 PREDICTED: dynein regulatory complex protein 1 isoform X1 [Pygocentrus nattereri])

HSP 1 Score: 117.5 bits (293), Expect = 2.100e-22
Identity = 107/425 (25.18%), Postives = 208/425 (48.94%), Query Frame = 0
Query:    9 SSSLPMVD-ESPLKQIPQQVALYRAAFLARMQTSLEDVQALGQETDALKAQICQRNGRRADARMVLLQ------------GAD-----RRSQNEEIDR----RWEHLLLTSSVPPDQIQTSSDGSSAKIIENDSKDSIPLLELYRELEAQRGACTAMLQSKNDLIQEAQAQLTEHEEEYVQAISRYGLEIENMVLKMRADSKALQDHYEREMDALEATFVTEREGMQQAHQITMDGLVAQQKAADLRHSQDAQEGEERFQRELEALRVQDGEDYHQLQIRLEMERDAADRQVEEVMTTTQVQQEKLVHDHRILTDREVEKSASLAAQKMKLVKLRDSVLALTSEYKEHDAREKKRFEELTQEVCRLHKKYKDLQQRFRHFSCADRDRYDSAWARHEDEIQAAVEKVLAIDELLFVQLLGQEWTPP 412
            +S+ P V+ E+P ++I  +     A   A+ +  LE V +  +E    +A+  Q    +++ RMV LQ             AD     RR+  EE  R    + E+   +S    +++      ++AK I  D +D+         L +Q+  C  ++++KN LI E Q +L   ++ YV+ + +   +++ M+ +M+    +L   Y +E+D +E +F  ER+ +   ++   +    ++   +L +     +  E  +  L  LRV+  E+Y+ ++ +LE +    ++Q++++  T Q+ QEKL ++  +L     E   + + QK K+ + +D +  L  +    + +  +  + LT +  R  ++YKD+Q++ RHF+  D  R+D  W  +E E +A V + L ID L+  Q LG  W PP
Sbjct:    5 NSAGPSVESENPEERITARRLRIAARNEAKKRQELE-VDSQEKEDIEEEARTSQTQVEQSERRMVKLQTDGTELVTNILVAADARESKRRAALEEARRLRVEKLENEAKSSLEKFEEVTRKWTAATAKTIPQDLRDA---------LNSQQQLCALLIENKNKLINELQQELKASDDRYVKDLKKQTEDVDIMIERMQEQITSLMKSYRQELDLIENSFDDERKTLLAGNKKKWEQQRKERGNKELEYLLQRMKQVEEHEVLLHRLRVEHAEEYNMIKTKLETDVQILEQQLQQMKATYQLNQEKLEYNIHVLQKHNEENIITRSQQKRKIRRQQDVLNNLKIKCANQEKQSHEENQLLTDDYKRAMQQYKDMQKKMRHFAAVDAKRFDEVWLMNEAEAKALVHRALEIDRLIHEQQLGLAWFPP 419          
The following BLAST results are available for this feature:
BLAST of NO02G00860 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_018931802.14.300e-2325.51PREDICTED: dynein regulatory complex protein 1 iso... [more]
XP_007898606.19.500e-2326.06PREDICTED: dynein regulatory complex protein 1 [Ca... [more]
XP_018430142.19.500e-2326.41PREDICTED: dynein regulatory complex protein 1, pa... [more]
XP_014000687.11.200e-2223.22PREDICTED: dynein regulatory complex protein 1 [Sa... [more]
XP_016391594.11.200e-2225.97PREDICTED: LOW QUALITY PROTEIN: dynein regulatory ... [more]
XP_016351839.11.600e-2225.22PREDICTED: dynein regulatory complex protein 1-lik... [more]
EMP23691.12.100e-2226.41hypothetical protein UY3_19251 [Chelonia mydas][more]
XP_007072668.12.100e-2226.41PREDICTED: dynein regulatory complex protein 1 [Ch... [more]
XP_016093962.12.100e-2224.68PREDICTED: LOW QUALITY PROTEIN: dynein regulatory ... [more]
XP_017573539.12.100e-2225.18PREDICTED: dynein regulatory complex protein 1 iso... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006684NSK006684Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G00860.1NO02G00860.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|652715gene_663Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G00860.1NO02G00860.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G00860 ID=NO02G00860|Name=NO02G00860|organism=Nannochloropsis oceanica|type=gene|length=2675bp
ATGGTCTCGGAAAAGGTACTATTATCCTCGTCCTTACCCATGGTCGACGA
GAGTCCTCTTAAACAAATTCCCCAGCAAGTCGCCCTTTACCGCGCCGCTT
TCTTGGCACGAATGCAGACGAGTCTGGAGGATGTGCAGGCATTGGGCCAG
GAAACTGACGCCTTGAAAGCCCAGATATGTCAACGCAATGGGCGGCGGGC
CGATGCACGGATGGTGCTGCTGCAAGGAGCGGACAGGCGGTCGCAAAATG
AGGAGATTGACAGGCGTTGGGAACACCTGCTCCTTACCTCTTCTGTCCCG
CCCGATCAGATCCAGACTTCCTCTGATGGTAGCAGCGCGAAGATTATTGA
GAATGACAGCAAAGATTCCATCCCGCTCCTTGAATTGTATCGGGAGCTCG
AGGCGCAGCGCGGGGCTTGCACAGCCATGCTTCAGTCCAAGAACGACCTC
ATTCAAGAAGCCCAAGCGCAGCTCACGGAGCATGAAGAGGAATACGTCCA
AGCCATTTCACGATATGGCCTAGAGATCGAAAATATGGTTTTAAAGATGC
GTGCGGACAGCAAGGCCTTGCAGGACCACTACGAGCGAGAGATGGATGCC
TTGGAGGCCACCTTTGTGACGGAGCGGGAGGGTATGCAGCAGGCGCATCA
GATCACTATGGACGGGCTTGTGGCTCAGCAGAAAGCAGCTGATCTCCGGC
ATTCTCAAGATGCCCAAGAGGGGGAAGAACGCTTTCAGCGCGAGCTGGAA
GCGTTGCGAGTGCAGGATGGGGAGGATTACCACCAGCTTCAGATTCGGTT
GGAAATGGAGCGAGACGCTGCGGACCGGCAAGTGGAAGAGGTCATGACCA
CGACGCAAGTGCAGCAAGAAAAGCTTGTGCACGACCACCGCATTCTGACG
GATCGTGAAGTAGAGAAATCGGCGAGCCTGGCGGCGCAGAAAATGAAGTT
GGTAAAGCTGAGGGATTCGGTACTGGCCTTGACCTCCGAGTACAAGGAAC
ACGACGCGCGGGAGAAAAAGCGATTCGAGGAACTGACGCAGGAGGTCTGT
CGCCTGCATAAGAAGTACAAGGACTTGCAGCAACGTTTTCGGCATTTTTC
TTGCGCGGATCGGGATAGGTATGACAGTGCATGGGCGCGGCACGAGGATG
AGATTCAAGCAGCGGTTGAGAAGGTGCTGGCGATTGACGAGCTTCTATTT
GTGCAGCTTCTGGGGCAAGAATGGACGCCTCCGCCGAGGAACGACTTGTT
GCTGGAGTTGGATGAAGATAAGAAACAATATGCCGGTGGTGACGAAGGCC
CCAACCCGGTGGGCGCGCACTCGAAGGGGAAGGAGGAAGAGGGGGATGGA
AGAGCTGCCACGGCCGTTGGGGGCGAGGAGGAGGAGAAGGAGAAGGATGG
CGCTTTCGGCACAGGAAACGGACGTCAGGAAATAGATTCAGCGCTGGTGA
TGGAGCAGGTATTGATGAACAAGATGCTTGGACTCATCATCCAGGAAGCT
GATTTTCTTCTTCTTGAGGACACAGAAGCCGTAGAGGCACAGCAGAAAAA
GGCGGCGGCAGCGGCAGAGAAGAAAGCCAAGAGCGGAACAAGGCCCAAGG
CTGATTGGGTTAATACGGTGGCCAAGGTAGTGGCGGAGTTCCCGCCACTC
CTGCGCAGAGATAAGGATACGAAGAGGAGCAGCAAGAGCGTGGAGATAAA
GGCCCAAACGGAAAAGAAGGACGGCGAAGCAGAGACGGCTACGGTCCTTA
TGCCTGAGGAGGCTGCTGTGGCTGCGCAGGAGGTGCATGCAATTGCCGCA
AACGAGGGCAATGAACTGACACAAGCAGCGGAAGAAGCGATGCTGGTCGT
ACCAGCGGCAGAAGAAGCAGCCACAGCAGCTGCAAAGGCCGCGCAGGCTG
AGGAAGAGGACCTGCTGGGTGCATCACAATATGGCTGTCAGCGCGTACTC
CGTGCCCTGGGCATCCAGGACGAGGCTGAGGCCCGGACGTTGCTCACGTA
TTTCCTTAAAAAGAAGGAACGGAAAGAGGGAGAAAGCAGAGAGGGGGATG
GGGGGGAGCAAAAGGAGGACGGGCTGGAAGAGGTAGGGATGATCCGGAAG
CTTGCACTACTTTTGCCGGCCGCTGCGTTTGCCATTTCTCCGCAAGACAT
GTATGTGATGATCGGACCTGAGGAGGTGATAGGCGCTTTGCACCGTTTCC
TCTTTGACAAAAAGAGGCTGGAAGAGAATGCATGCAAGCAGCAGCTACGG
CAGCGCCAGCGTCGGCATCGTCGGCAGAGCCTGAGCGGGAGCTGCAGTGG
TCAAGGAGGAGGTACCGAGGGAGGAGAAGGAGATAGGACTTTGTGGCGAA
GCCTGGCAAACGTCTTGCCGGCAGCGCATTTCCAGACGTGGCAAGACTTG
GAGCAGTCACTCTTGGCGTACCATCGCTTGCTGGAGGAGCGAGGAAGGGT
GTTGGGTTCGATGGAACGGTTGGAGGAGGAGAATGCCAGGTTGCGACTGA
CTGTGAGGGCGTGTGTCGAAGACAGGGTGAATGGGGAGTTGTTGGTGCCT
CCGTTTATGGATTCAGGAGCAGGAGGGGAAGGAGAGGGAGAAGAAGAGGG
GCCTCGATAGAGGAAAGAGATATTGGAGGGAGAGGCAAGGATGGTATGAG
AAATGAAGCCATATAGGTGAGAAGC
back to top

protein sequence of NO02G00860.1

>NO02G00860.1-protein ID=NO02G00860.1-protein|Name=NO02G00860.1|organism=Nannochloropsis oceanica|type=polypeptide|length=870bp
MVSEKVLLSSSLPMVDESPLKQIPQQVALYRAAFLARMQTSLEDVQALGQ
ETDALKAQICQRNGRRADARMVLLQGADRRSQNEEIDRRWEHLLLTSSVP
PDQIQTSSDGSSAKIIENDSKDSIPLLELYRELEAQRGACTAMLQSKNDL
IQEAQAQLTEHEEEYVQAISRYGLEIENMVLKMRADSKALQDHYEREMDA
LEATFVTEREGMQQAHQITMDGLVAQQKAADLRHSQDAQEGEERFQRELE
ALRVQDGEDYHQLQIRLEMERDAADRQVEEVMTTTQVQQEKLVHDHRILT
DREVEKSASLAAQKMKLVKLRDSVLALTSEYKEHDAREKKRFEELTQEVC
RLHKKYKDLQQRFRHFSCADRDRYDSAWARHEDEIQAAVEKVLAIDELLF
VQLLGQEWTPPPRNDLLLELDEDKKQYAGGDEGPNPVGAHSKGKEEEGDG
RAATAVGGEEEEKEKDGAFGTGNGRQEIDSALVMEQVLMNKMLGLIIQEA
DFLLLEDTEAVEAQQKKAAAAAEKKAKSGTRPKADWVNTVAKVVAEFPPL
LRRDKDTKRSSKSVEIKAQTEKKDGEAETATVLMPEEAAVAAQEVHAIAA
NEGNELTQAAEEAMLVVPAAEEAATAAAKAAQAEEEDLLGASQYGCQRVL
RALGIQDEAEARTLLTYFLKKKERKEGESREGDGGEQKEDGLEEVGMIRK
LALLLPAAAFAISPQDMYVMIGPEEVIGALHRFLFDKKRLEENACKQQLR
QRQRRHRRQSLSGSCSGQGGGTEGGEGDRTLWRSLANVLPAAHFQTWQDL
EQSLLAYHRLLEERGRVLGSMERLEEENARLRLTVRACVEDRVNGELLVP
PFMDSGAGGEGEGEEEGPR*
back to top
Synonyms
Publications