NO02G00860, NO02G00860 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G00860 vs. NCBI_GenBank
Match: XP_018931802.1 (PREDICTED: dynein regulatory complex protein 1 isoform X1 [Cyprinus carpio] >XP_018931803.1 PREDICTED: dynein regulatory complex protein 1 isoform X2 [Cyprinus carpio]) HSP 1 Score: 119.8 bits (299), Expect = 4.300e-23 Identity = 87/341 (25.51%), Postives = 169/341 (49.56%), Query Frame = 0 Query: 77 ADRRSQNEEIDRRWEHLLLTSSVPPDQIQTSSDGSSAKIIE-----NDSKDSIPLLELYRELEAQRGACTAMLQSKNDLIQEAQAQLTEHEEEYVQAISRYGLEIENMVLKMRADSKALQDHYEREMDALEATFVTEREGMQQAHQITMDGLVAQQKAADLRHSQDAQEGEERFQRELEALRVQDGEDYHQLQIRLEMERDAADRQVEEVMTTTQVQQEKLVHDHRILTDREVEKSASLAAQKMKLVKLRDSVLALTSEYKEHDAREKKRFEELTQEVCRLHKKYKDLQQRFRHFSCADRDRYDSAWARHEDEIQAAVEKVLAIDELLFVQLLGQEWTPPP 413 +DRR++ EE R + ++++ + S K E D+K L+L + +Q+ C +L KN LI E Q +L ++ YV+ + R +I+ ++ +M +L+ Y ++ +E +F ER + H+ + +Q +LR+ E + L+ LRV E+Y+ +IR++ E ++++EV + +EKL + + +L RE E + + K K+++++D + L S+ + + K + L + R+ ++Y D+Q++ RHF+ D +R++ W +EDE++A +VL D ++ Q LG W PP Sbjct: 98 SDRRTELEEACR----------LRREKLENEAKSSQEKFEEITRKWTDAKMKQTPLDLRDAMNSQQQLCEQILGDKNKLISELQQELKASDDHYVKDLKRQAKDIDLLIERMEEQISSLKKSYREDLQQIENSFDEERRTLLTKHRKKWGHQMKEQSEKELRNMMQGLSLLEEHEDLLQKLRVWKAEEYNTDKIRMDTEVQNLRKKLQEVKFNCHLNEEKLDYKYEVLKKREEENAILKSHLKRKIIRMQDVLNNLKSKCASQEKQLKTEEQSLRNDYTRIKQQYIDMQKKARHFAALDAERFEKLWLINEDEVKALAHRVLETDRIIHEQQLGLAWVSPP 428
BLAST of NO02G00860 vs. NCBI_GenBank
Match: XP_007898606.1 (PREDICTED: dynein regulatory complex protein 1 [Callorhinchus milii]) HSP 1 Score: 118.6 bits (296), Expect = 9.500e-23 Identity = 74/284 (26.06%), Postives = 149/284 (52.46%), Query Frame = 0 Query: 128 ELYRELEAQRGACTAMLQSKNDLIQEAQAQLTEHEEEYVQAISRYGLEIENMVLKMRADSKALQDHYEREMDALEATFVTEREGMQQAHQITMDGLVAQQKAADLRHSQDAQEGEERFQRELEALRVQDGEDYHQLQIRLEMERDAADRQVEEVMTTTQVQQEKLVHDHRILTDREVEKSASLAAQKMKLVKLRDSVLALTSEYKEHDAREKKRFEELTQEVCRLHKKYKDLQQRFRHFSCADRDRYDSAWARHEDEIQAAVEKVLAIDELLFVQLLGQEWTPP 412 +LY L +Q+ CT ++Q KN LI E Q +L ++ YV+ + + +IE + +M ER G+Q+ + G + ++ ++ + E E ++ +L+ RVQD E+Y+ ++I+LE + + ++Q++++ T Q+ QEKL +++++L R+ E + + QK ++ + +D++ L S+ + + ++ + LT R+ ++YKD+Q + RHF+ D ++ W +E E++ V+K L D ++ Q LG W P Sbjct: 142 DLYDLLISQQKQCTELIQDKNKLINELQQELKLKDDHYVKDLRKASEDIELLAERMEXXXXXXXXXXXXXXXXXXXXXQMERHGLQRNNFWDWKGAMQTRRDKEIDYLMTRLEKVEEYEEQLQEFRVQDAEEYNMIKIKLENDVEMLEQQLQQMRATFQLNQEKLEYNYQVLKKRDEENMITKSQQKRRITRQQDTLNRLKSKLAKQEKMYQEENQTLTDGYNRVVEQYKDIQSKIRHFAAVDAKNFEDVWLMNEGEVKELVQKALEADRIIHEQQLGLCWKKP 425
BLAST of NO02G00860 vs. NCBI_GenBank
Match: XP_018430142.1 (PREDICTED: dynein regulatory complex protein 1, partial [Nanorana parkeri]) HSP 1 Score: 118.6 bits (296), Expect = 9.500e-23 Identity = 75/284 (26.41%), Postives = 149/284 (52.46%), Query Frame = 0 Query: 128 ELYRELEAQRGACTAMLQSKNDLIQEAQAQLTEHEEEYVQAISRYGLEIENMVLKMRADSKALQDHYEREMDALEATFVTEREGMQQAHQITMDGLVAQQKAADLRHSQDAQEGEERFQRELEALRVQDGEDYHQLQIRLEMERDAADRQVEEVMTTTQVQQEKLVHDHRILTDREVEKSASLAAQKMKLVKLRDSVLALTSEYKEHDAREKKRFEELTQEVCRLHKKYKDLQQRFRHFSCADRDRYDSAWARHEDEIQAAVEKVLAIDELLFVQLLGQEWTPP 412 EL+ L +Q+ C +++ KN LI E Q +L +++YV+ + + +I+ + K+L Y E+ E F ER + + + + + +L + + E ++++L LRVQDGE+Y ++I+LE + +Q++ + T Q+ QEKL +++++L R+ E + + + QK ++ +L D + L + + + K+ + LT + R ++YK++Q++ RHF+ D ++ W +E+EI+ V + L D ++ Q LG W P Sbjct: 33 ELWALLNSQQQQCAQLIEDKNKLIGELQQELKRKDDQYVKDLKKQAEDIDLLXXXXXXXXKSLMKTYREELLHTEKAFEQERRELLDVSKKKWEQTMQGRWDKELESLLNRMKKVEEYEKQLNQLRVQDGEEYTMIKIKLETDVQILQQQLQHIKATFQLNQEKLEYNYQVLKKRDEENTITKSQQKRRITRLHDVLNNLRIKLDKQIKQYKEENQSLTDDFKRNVEQYKEVQKKMRHFAAVDAKKFHDIWVMNEEEIKQLVLRALEADRIIQEQQLGLPWIAP 316
BLAST of NO02G00860 vs. NCBI_GenBank
Match: XP_014000687.1 (PREDICTED: dynein regulatory complex protein 1 [Salmo salar]) HSP 1 Score: 118.2 bits (295), Expect = 1.200e-22 Identity = 98/422 (23.22%), Postives = 202/422 (47.87%), Query Frame = 0 Query: 13 PMVD-ESPLKQIPQQVALYRAAFLARMQTSLEDVQALGQETDALK-----AQICQRNGRRADARMVLLQ------------GADRRSQNEEIDRRWEHLLLTSSVPPDQIQTSSDGSSAKIIENDSKDSIPLL-----ELYRELEAQRGACTAMLQSKNDLIQEAQAQLTEHEEEYVQAISRYGLEIENMVLKMRADSKALQDHYEREMDALEATFVTEREGMQQAHQITMDGLVAQQKAADLRHSQDAQEGEERFQRELEALRVQDGEDYHQLQIRLEMERDAADRQVEEVMTTTQVQQEKLVHDHRILTDREVEKSASLAAQKMKLVKLRDSVLALTSEYKEHDAREKKRFEELTQEVCRLHKKYKDLQQRFRHFSCADRDRYDSAWARHEDEIQAAVEKVLAIDELLFVQLLGQEWTPP 412 P VD E+P +++A R AR + Q LG ++ K A+ Q +++ RM+ LQ AD R+ + + H L ++++ + S K E K ++ + +L L +Q+ C +++ KN LI+E Q ++ ++ YV+ + + +++ M+ +M K L Y E+D +E +F ER+ + ++ + + +++ +L + + E ++ L+ LR +D E+Y+ ++I+L+ + ++Q++++ T Q+ R+ E + + + QK K+ +L+D V L + + + ++ + LT + R+ ++YK +Q++ RHF+ D +++ W +E+E++A VEK L D L+ Q LG W P Sbjct: 16 PSVDSENP----EERIAARRLRIAARSEAKKR--QELGDDSHEKKEIKEEARKSQHQVEQSEKRMIKLQSDGTELVTNIQVAADSRASQRQTEVEEAHRLRV-----EKLENEAKSSLEKFEEITRKWTVAKMKEIPQDLRDSLSSQQQLCALLIEDKNKLIKELQQEMKLSDDRYVKDLKKQAEDVDLMIERMEDQVKFLMGSYRNELDQIENSFEHERKILLTGNRKKWEQYMKERRDKELENVMQRMKRVEEYEVLLQQLRTEDAEEYNMIKIKLDTDVQILEQQLQQMKATYQLNXXXXXXXXXXXXKRDEENTITKSQQKRKITRLQDVVNNLKIKCANQEKQSREENQNLTDDYTRIMQQYKHMQKKMRHFAAIDAKKFEEVWLMNEEEVKALVEKALDTDRLVHEQQLGLAWQRP 426
BLAST of NO02G00860 vs. NCBI_GenBank
Match: XP_016391594.1 (PREDICTED: LOW QUALITY PROTEIN: dynein regulatory complex protein 1-like [Sinocyclocheilus rhinocerous]) HSP 1 Score: 118.2 bits (295), Expect = 1.200e-22 Identity = 87/335 (25.97%), Postives = 166/335 (49.55%), Query Frame = 0 Query: 83 NEEIDRRWEHLLLTSSVPPDQIQTSSDGSSAKIIE-----NDSKDSIPLLELYRELEAQRGACTAMLQSKNDLIQEAQAQLTEHEEEYVQAISRYGLEIENMVLKMRADSKALQDHYEREMDALEATFVTEREGMQQAHQITMDGLVAQQKAADLRHSQDAQEGEERFQRELEALRVQDGEDYHQLQIRLEMERDAADRQVEEVMTTTQVQQEKLVHDHRILTDREVEKSASLAAQKMKLVKLRDSVLALTSEYKEHDAREKKRFEELTQEVCRLHKKYKDLQQRFRHFSCADRDRYDSAWARHEDEIQAAVEKVLAIDELLFVQLLGQEWTPPP 413 + E DRR E L + + ++ + S K E D+K L+L L +Q+ C +L KN LI E Q +L ++ YV+ + + +I+ ++ +M +L+ Y ++ +E +F ER + H+ + ++ +LR+ E + L+ LRV E+Y+ +IR++ E ++++EV + +EKL + + +L RE E + + K K+++++D + L S+ + + K + L + R+ ++YKD+Q++ RHF+ D +R++ W EDE++A +VL D ++ Q LG W PP Sbjct: 95 SRESDRRTE-LEEACRLRRENLENEAKSSQEKFGEITRKWTDAKMKQTPLDLRDALNSQQQLCEQILADKNKLISELQRELKASDDHYVKDLKKQAKDIDLLIDRMEEQISSLKKSYREDLQQIENSF-DERRTLLTKHRKKWGHQMKERSKKELRNMMQGLSLLEEHEDLLQKLRVWKAEEYNTDKIRMDTEVQNLRKKLQEVKFNCHLNEEKLDYKYEVLKKREEENAILKSHLKRKIIRMQDVLNNLKSKCANQEKQSKAEEQSLRNDYTRIRQQYKDMQKKARHFAALDAERFEKLWLISEDEVKALAHRVLETDRIIHEQQLGLAWVSPP 427
BLAST of NO02G00860 vs. NCBI_GenBank
Match: XP_016351839.1 (PREDICTED: dynein regulatory complex protein 1-like [Sinocyclocheilus anshuiensis]) HSP 1 Score: 117.9 bits (294), Expect = 1.600e-22 Identity = 86/341 (25.22%), Postives = 167/341 (48.97%), Query Frame = 0 Query: 77 ADRRSQNEEIDRRWEHLLLTSSVPPDQIQTSSDGSSAKIIE-----NDSKDSIPLLELYRELEAQRGACTAMLQSKNDLIQEAQAQLTEHEEEYVQAISRYGLEIENMVLKMRADSKALQDHYEREMDALEATFVTEREGMQQAHQITMDGLVAQQKAADLRHSQDAQEGEERFQRELEALRVQDGEDYHQLQIRLEMERDAADRQVEEVMTTTQVQQEKLVHDHRILTDREVEKSASLAAQKMKLVKLRDSVLALTSEYKEHDAREKKRFEELTQEVCRLHKKYKDLQQRFRHFSCADRDRYDSAWARHEDEIQAAVEKVLAIDELLFVQLLGQEWTPPP 413 +DRR++ EE R + + ++ + S K E D+K L+L L +Q+ C +L KN LI E Q +L ++ YV+ + R +I+ ++ +M +L+ Y ++ +E +F ER + H+ + ++ +LR+ E + L+ LRV E+Y+ +IR++ E ++++EV + +EKL + + ++ RE E + + K K+++++D + L S+ + + K + L + R+ ++YKD+Q++ HF+ D +R++ W EDE++A +VL D ++ Q LG W PP Sbjct: 98 SDRRTELEEACR----------LRRENLENEAKSSQEKFGEITRKWTDAKMKQTPLDLRDALNSQQQLCEQILADKNKLISELQQELKASDDHYVKDLKRQAKDIDLLIDRMEEQISSLKKSYREDLQQIENSFDEERRTLLTKHRKKWGHQMKERSEKELRNMMQGLSLLEEHEDLLQKLRVWKAEEYNTDKIRMDTEVQNLRKKLQEVKFNCHLNEEKLDYKYEVVKKREEENAILKSHLKRKIIRMQDVLNNLKSKCANQEKQSKAEEQSLRNDYTRIKQQYKDMQKKAGHFAALDAERFEKLWLISEDEVKALAHRVLETDRIIHEQQLGLAWVSPP 428
BLAST of NO02G00860 vs. NCBI_GenBank
Match: EMP23691.1 (hypothetical protein UY3_19251 [Chelonia mydas]) HSP 1 Score: 117.5 bits (293), Expect = 2.100e-22 Identity = 75/284 (26.41%), Postives = 149/284 (52.46%), Query Frame = 0 Query: 128 ELYRELEAQRGACTAMLQSKNDLIQEAQAQLTEHEEEYVQAISRYGLEIENMVLKMRADSKALQDHYEREMDALEATFVTEREGMQQAHQITMDGLVAQQKAADLRHSQDAQEGEERFQRELEALRVQDGEDYHQLQIRLEMERDAADRQVEEVMTTTQVQQEKLVHDHRILTDREVEKSASLAAQKMKLVKLRDSVLALTSEYKEHDAREKKRFEELTQEVCRLHKKYKDLQQRFRHFSCADRDRYDSAWARHEDEIQAAVEKVLAIDELLFVQLLGQEWTPP 412 +L+ L Q+ C +++ KN LI E Q +L ++ YV+ + + +I +V +M + L Y RE+ +E F ER + +++ + + A +L + + E ++++L L+V+D E+Y ++I+LE + ++Q++++ Q+ QEKL ++ ++L R+ E + + QK KL +L D + L + + + ++ + LT + R+ ++YKDLQ+ RHF+ D ++ W +E+E + + K L D ++ Q LG W P Sbjct: 220 DLWDVLNQQQQQCALLIEEKNKLISELQQELKSKDDHYVKDLKKQSDDINLLVERMEEQIRNLMKTYRRELTQIEKAFELERRELLSSNKKKWEQAMQAHNAQELENLITRMQTVEEYEKQLNQLQVKDAEEYATIKIQLENDVQILEQQLQQMKAIYQLNQEKLEYNFQVLKKRDEENTIIKSQQKRKLNRLHDVLNNLRIKLAKQIKQFQEENQNLTADYKRIVEQYKDLQRTMRHFAVVDAQKFLEIWLMNEEEAKGLMWKALEADRVIHTQQLGLPWVEP 503
BLAST of NO02G00860 vs. NCBI_GenBank
Match: XP_007072668.1 (PREDICTED: dynein regulatory complex protein 1 [Chelonia mydas]) HSP 1 Score: 117.5 bits (293), Expect = 2.100e-22 Identity = 75/284 (26.41%), Postives = 149/284 (52.46%), Query Frame = 0 Query: 128 ELYRELEAQRGACTAMLQSKNDLIQEAQAQLTEHEEEYVQAISRYGLEIENMVLKMRADSKALQDHYEREMDALEATFVTEREGMQQAHQITMDGLVAQQKAADLRHSQDAQEGEERFQRELEALRVQDGEDYHQLQIRLEMERDAADRQVEEVMTTTQVQQEKLVHDHRILTDREVEKSASLAAQKMKLVKLRDSVLALTSEYKEHDAREKKRFEELTQEVCRLHKKYKDLQQRFRHFSCADRDRYDSAWARHEDEIQAAVEKVLAIDELLFVQLLGQEWTPP 412 +L+ L Q+ C +++ KN LI E Q +L ++ YV+ + + +I +V +M + L Y RE+ +E F ER + +++ + + A +L + + E ++++L L+V+D E+Y ++I+LE + ++Q++++ Q+ QEKL ++ ++L R+ E + + QK KL +L D + L + + + ++ + LT + R+ ++YKDLQ+ RHF+ D ++ W +E+E + + K L D ++ Q LG W P Sbjct: 223 DLWDVLNQQQQQCALLIEEKNKLISELQQELKSKDDHYVKDLKKQSDDINLLVERMEEQIRNLMKTYRRELTQIEKAFELERRELLSSNKKKWEQAMQAHNAQELENLITRMQTVEEYEKQLNQLQVKDAEEYATIKIQLENDVQILEQQLQQMKAIYQLNQEKLEYNFQVLKKRDEENTIIKSQQKRKLNRLHDVLNNLRIKLAKQIKQFQEENQNLTADYKRIVEQYKDLQRTMRHFAVVDAQKFLEIWLMNEEEAKGLMWKALEADRVIHTQQLGLPWVEP 506
BLAST of NO02G00860 vs. NCBI_GenBank
Match: XP_016093962.1 (PREDICTED: LOW QUALITY PROTEIN: dynein regulatory complex protein 1-like [Sinocyclocheilus grahami]) HSP 1 Score: 117.5 bits (293), Expect = 2.100e-22 Identity = 78/316 (24.68%), Postives = 159/316 (50.32%), Query Frame = 0 Query: 102 DQIQTSSDGSSAKIIE-----NDSKDSIPLLELYRELEAQRGACTAMLQSKNDLIQEAQAQLTEHEEEYVQAISRYGLEIENMVLKMRADSKALQDHYEREMDALEATFVTEREGMQQAHQITMDGLVAQQKAADLRHSQDAQEGEERFQRELEALRVQDGEDYHQLQIRLEMERDAADRQVEEVMTTTQVQQEKLVHDHRILTDREVEKSASLAAQKMKLVKLRDSVLALTSEYKEHDAREKKRFEELTQEVCRLHKKYKDLQQRFRHFSCADRDRYDSAWARHEDEIQAAVEKVLAIDELLFVQLLGQEWTPPP 413 D+++ + S K E D+K L+L L +Q+ C ++ KN LI E Q +L ++ YV+ + + +I+ ++ +M +L+ Y +++ +E +F ER + H+ + ++ +L++ E + L+ LRVQ E+Y+ +I+++ E ++++EV + +EKL + + +L RE E + + K K+++++D + L S+ + + K + L + R+ ++YKD+Q++ RHF+ D +R++ W E E++A + L D ++ Q LG W PP Sbjct: 113 DKLENEAKSSQEKFEEITRKWTDAKMKQTPLDLRDALNSQQQLCEQIVADKNKLISELQQELKASDDRYVKDLKKQAKDIDLIIERMEEQISSLKKSYREDLEQIENSFDEERRTLLTKHRKKWGHQMKERSEKELKNMLQGLSLLEEHEDLLQKLRVQKAEEYNTDKIKMDTEVQNLRKKLQEVKFNCHLNEEKLDYKYEVLKKREEENTILKSQLKRKIIRMQDILNNLKSKCANQEKQSKAEEQSLRNDYARIKQQYKDMQKKARHFAVLDAERFEKIWLISEGEVKALAHRALETDRIIHEQQLGLAWVSPP 428
BLAST of NO02G00860 vs. NCBI_GenBank
Match: XP_017573539.1 (PREDICTED: dynein regulatory complex protein 1 isoform X1 [Pygocentrus nattereri] >XP_017573540.1 PREDICTED: dynein regulatory complex protein 1 isoform X1 [Pygocentrus nattereri]) HSP 1 Score: 117.5 bits (293), Expect = 2.100e-22 Identity = 107/425 (25.18%), Postives = 208/425 (48.94%), Query Frame = 0 Query: 9 SSSLPMVD-ESPLKQIPQQVALYRAAFLARMQTSLEDVQALGQETDALKAQICQRNGRRADARMVLLQ------------GAD-----RRSQNEEIDR----RWEHLLLTSSVPPDQIQTSSDGSSAKIIENDSKDSIPLLELYRELEAQRGACTAMLQSKNDLIQEAQAQLTEHEEEYVQAISRYGLEIENMVLKMRADSKALQDHYEREMDALEATFVTEREGMQQAHQITMDGLVAQQKAADLRHSQDAQEGEERFQRELEALRVQDGEDYHQLQIRLEMERDAADRQVEEVMTTTQVQQEKLVHDHRILTDREVEKSASLAAQKMKLVKLRDSVLALTSEYKEHDAREKKRFEELTQEVCRLHKKYKDLQQRFRHFSCADRDRYDSAWARHEDEIQAAVEKVLAIDELLFVQLLGQEWTPP 412 +S+ P V+ E+P ++I + A A+ + LE V + +E +A+ Q +++ RMV LQ AD RR+ EE R + E+ +S +++ ++AK I D +D+ L +Q+ C ++++KN LI E Q +L ++ YV+ + + +++ M+ +M+ +L Y +E+D +E +F ER+ + ++ + ++ +L + + E + L LRV+ E+Y+ ++ +LE + ++Q++++ T Q+ QEKL ++ +L E + + QK K+ + +D + L + + + + + LT + R ++YKD+Q++ RHF+ D R+D W +E E +A V + L ID L+ Q LG W PP Sbjct: 5 NSAGPSVESENPEERITARRLRIAARNEAKKRQELE-VDSQEKEDIEEEARTSQTQVEQSERRMVKLQTDGTELVTNILVAADARESKRRAALEEARRLRVEKLENEAKSSLEKFEEVTRKWTAATAKTIPQDLRDA---------LNSQQQLCALLIENKNKLINELQQELKASDDRYVKDLKKQTEDVDIMIERMQEQITSLMKSYRQELDLIENSFDDERKTLLAGNKKKWEQQRKERGNKELEYLLQRMKQVEEHEVLLHRLRVEHAEEYNMIKTKLETDVQILEQQLQQMKATYQLNQEKLEYNIHVLQKHNEENIITRSQQKRKIRRQQDVLNNLKIKCANQEKQSHEENQLLTDDYKRAMQQYKDMQKKMRHFAAVDAKRFDEVWLMNEAEAKALVHRALEIDRLIHEQQLGLAWFPP 419 The following BLAST results are available for this feature:
BLAST of NO02G00860 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G00860 ID=NO02G00860|Name=NO02G00860|organism=Nannochloropsis oceanica|type=gene|length=2675bpback to top protein sequence of NO02G00860.1 >NO02G00860.1-protein ID=NO02G00860.1-protein|Name=NO02G00860.1|organism=Nannochloropsis oceanica|type=polypeptide|length=870bpback to top Synonyms
Publications
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