NO02G00790, NO02G00790 (gene) Nannochloropsis oceanica

Overview
NameNO02G00790
Unique NameNO02G00790
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4476
Alignment locationchr2:261425..265900 +

Link to JBrowse

Properties
Property NameValue
Description60S ribosome subunit biogenesis protein NIP7 homolog
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:261425..265900 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003723RNA binding
Vocabulary: INTERPRO
TermDefinition
IPR015947PUA-like_domain
IPR005155Rbsml_synth_fac_NIP7-like
IPR002478PUA
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
[Close]
BLAST of NO02G00790 vs. NCBI_GenBank
Match: XP_005852699.1 (60s ribosome subunit biogenesis protein nip7-like protein [Nannochloropsis gaditana CCMP526] >EKU23132.1 60s ribosome subunit biogenesis protein nip7-like protein [Nannochloropsis gaditana CCMP526] >EWM30578.1 60s ribosome subunit biogenesis protein nip7 [Nannochloropsis gaditana])

HSP 1 Score: 351.7 bits (901), Expect = 1.400e-93
Identity = 166/180 (92.22%), Postives = 177/180 (98.33%), Query Frame = 0 
Query:    1 MRPLAEEETKKVFERLAKYVGGNLEQLVNRPDERYCFRYMDQRVYYVSERLMKTATNFGRDNLLSLGTCVGRFTKTEKFHISITFLDYLAQYASYKVWVKPQSEMGFLYGNNIVKSGLGRMTEAIPQYAGVVVFSMTDIPLGFGVAAQPTEVCKDLDPGANVVLHQGDVGEYLRVEDELS 181
            MRPL+E+ET+KVFERLAKYVGGNLEQLVNRPDERYCFRYMDQRVYYVSER+MK ATNFGR++LLS+GTCVGRFTK+EKFHI ITFLDYLAQYASYKVWVKPQSEMGFLYGNNI+KSGLGRMTE IPQYAGVVV+SMTDIPLGFGVAAQPT+VCKDLDPGANVVLHQGDVGEYLRVEDELS
Sbjct:    1 MRPLSEDETRKVFERLAKYVGGNLEQLVNRPDERYCFRYMDQRVYYVSERMMKIATNFGREHLLSIGTCVGRFTKSEKFHIYITFLDYLAQYASYKVWVKPQSEMGFLYGNNIIKSGLGRMTEGIPQYAGVVVYSMTDIPLGFGVAAQPTDVCKDLDPGANVVLHQGDVGEYLRVEDELS 180
[Close]
BLAST of NO02G00790 vs. NCBI_GenBank
Match: XP_008608455.1 (60S ribosome subunit biogenesis protein NIP7 [Saprolegnia diclina VS20] >XP_012207463.1 60S ribosome subunit biogenesis protein NIP7 [Saprolegnia parasitica CBS 223.65] >EQC38128.1 60S ribosome subunit biogenesis protein NIP7 [Saprolegnia diclina VS20] >KDO21784.1 60S ribosome subunit biogenesis protein NIP7 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 277.3 bits (708), Expect = 3.300e-71
Identity = 127/179 (70.95%), Postives = 150/179 (83.80%), Query Frame = 0 
Query:    1 MRPLAEEETKKVFERLAKYVGGNLEQLVNRPDERYCFRYMDQRVYYVSERLMKTATNFGRDNLLSLGTCVGRFTKTEKFHISITFLDYLAQYASYKVWVKPQSEMGFLYGNNIVKSGLGRMTEAIPQYAGVVVFSMTDIPLGFGVAAQPTEVCKDLDPGANVVLHQGDVGEYLRVEDEL 180
            MRPL +EE K VFE+++KY+G N++ LV RPDE++CFR     VYYVSE+LM+ ATN G D LLSLGT VG+ TKT+KFH+ ITFLDYLAQYA YKVW+KP SEM FLYGNN+VKSGLGR+TE  PQYAGVVV+SM D+PLGFG+AAQ TE+CKDLDP   VVLHQ D+GEYLRVEDE+
Sbjct:    1 MRPLTDEEMKTVFEKISKYIGRNVQHLVVRPDEKFCFRLHGDIVYYVSEKLMRQATNIGTDQLLSLGTAVGKLTKTKKFHLRITFLDYLAQYAKYKVWIKPNSEMSFLYGNNVVKSGLGRITEGTPQYAGVVVYSMNDVPLGFGIAAQATEMCKDLDPTGYVVLHQADIGEYLRVEDEM 179
[Close]
BLAST of NO02G00790 vs. NCBI_GenBank
Match: OQS06696.1 (60S ribosome subunit biogenesis protein NIP7 [Thraustotheca clavata])

HSP 1 Score: 276.2 bits (705), Expect = 7.400e-71
Identity = 126/179 (70.39%), Postives = 150/179 (83.80%), Query Frame = 0 
Query:    1 MRPLAEEETKKVFERLAKYVGGNLEQLVNRPDERYCFRYMDQRVYYVSERLMKTATNFGRDNLLSLGTCVGRFTKTEKFHISITFLDYLAQYASYKVWVKPQSEMGFLYGNNIVKSGLGRMTEAIPQYAGVVVFSMTDIPLGFGVAAQPTEVCKDLDPGANVVLHQGDVGEYLRVEDEL 180
            MRPL ++E K VFE+++KY+G N++ LV RPDE++CFR     VYYVSE+LM+ ATN G D LLSLGT VG+ TKT+KFH+ ITFLDYLAQYA YKVW+KP SEM FLYGNN+VKSGLGR+TE  PQYAGVVV+SM D+PLGFG+AAQ TE+CKDLDP   VVLHQ D+GEYLRVEDE+
Sbjct:    1 MRPLTDDEMKTVFEKISKYIGRNVQHLVVRPDEKFCFRLHGDIVYYVSEKLMRQATNIGTDQLLSLGTAVGKLTKTKKFHLRITFLDYLAQYAKYKVWIKPNSEMSFLYGNNVVKSGLGRITEGTPQYAGVVVYSMNDVPLGFGIAAQATEMCKDLDPTGYVVLHQADIGEYLRVEDEM 179
[Close]
BLAST of NO02G00790 vs. NCBI_GenBank
Match: OQR91329.1 (60S ribosome subunit biogenesis protein NIP7 [Achlya hypogyna])

HSP 1 Score: 275.8 bits (704), Expect = 9.600e-71
Identity = 126/179 (70.39%), Postives = 150/179 (83.80%), Query Frame = 0 
Query:    1 MRPLAEEETKKVFERLAKYVGGNLEQLVNRPDERYCFRYMDQRVYYVSERLMKTATNFGRDNLLSLGTCVGRFTKTEKFHISITFLDYLAQYASYKVWVKPQSEMGFLYGNNIVKSGLGRMTEAIPQYAGVVVFSMTDIPLGFGVAAQPTEVCKDLDPGANVVLHQGDVGEYLRVEDEL 180
            MRPL +EE K VFE+++KY+G N++ LV RPDE++CFR     VYYVSE+LM+ ATN G + LLSLGT VG+ TKT+KFH+ ITFLDYLAQYA YKVW+KP SEM FLYGNN+VKSGLGR+TE  PQYAGVVV+SM D+PLGFG+AAQ TE+CKDLDP   VVLHQ D+GEYLRVEDE+
Sbjct:    1 MRPLTDEEMKTVFEKISKYIGRNVQHLVVRPDEKFCFRLHGDIVYYVSEKLMRQATNIGTEQLLSLGTAVGKLTKTKKFHLRITFLDYLAQYAKYKVWIKPNSEMSFLYGNNVVKSGLGRITEGTPQYAGVVVYSMNDVPLGFGIAAQATEMCKDLDPTGYVVLHQADIGEYLRVEDEM 179
[Close]
BLAST of NO02G00790 vs. NCBI_GenBank
Match: GAY02851.1 (60S ribosome subunit biogenesis protein NIP7 [Pythium insidiosum] >GAY02854.1 60S ribosome subunit biogenesis protein NIP7 [Pythium insidiosum])

HSP 1 Score: 273.9 bits (699), Expect = 3.700e-70
Identity = 126/179 (70.39%), Postives = 149/179 (83.24%), Query Frame = 0 
Query:    1 MRPLAEEETKKVFERLAKYVGGNLEQLVNRPDERYCFRYMDQRVYYVSERLMKTATNFGRDNLLSLGTCVGRFTKTEKFHISITFLDYLAQYASYKVWVKPQSEMGFLYGNNIVKSGLGRMTEAIPQYAGVVVFSMTDIPLGFGVAAQPTEVCKDLDPGANVVLHQGDVGEYLRVEDEL 180
            MRPL +EE K VFE+++KY+G N++ LV RPDE+YCFR     VYY SE+LM+ ATN G D LLS+GT VG+FTKT+KFH+ ITFLDYLAQYA YKVW+KP SEM FLYGN++VKSGLGR+TE  PQYAGVVV+SM DIPLGFG+AAQ TE+CKDL P   VVLHQ D+GEYLRVEDE+
Sbjct:    1 MRPLTDEELKTVFEKVSKYIGRNVQHLVTRPDEKYCFRLHGNIVYYCSEKLMRQATNVGSDELLSIGTAVGKFTKTKKFHLRITFLDYLAQYAKYKVWIKPNSEMSFLYGNHVVKSGLGRITEGTPQYAGVVVYSMNDIPLGFGIAAQATEMCKDLKPTDYVVLHQADIGEYLRVEDEM 179
[Close]
BLAST of NO02G00790 vs. NCBI_GenBank
Match: XP_009531520.1 (hypothetical protein PHYSODRAFT_352017 [Phytophthora sojae] >EGZ14091.1 hypothetical protein PHYSODRAFT_352017 [Phytophthora sojae])

HSP 1 Score: 272.7 bits (696), Expect = 8.200e-70
Identity = 124/179 (69.27%), Postives = 149/179 (83.24%), Query Frame = 0 
Query:    1 MRPLAEEETKKVFERLAKYVGGNLEQLVNRPDERYCFRYMDQRVYYVSERLMKTATNFGRDNLLSLGTCVGRFTKTEKFHISITFLDYLAQYASYKVWVKPQSEMGFLYGNNIVKSGLGRMTEAIPQYAGVVVFSMTDIPLGFGVAAQPTEVCKDLDPGANVVLHQGDVGEYLRVEDEL 180
            MRPL ++E   VFE+++KY+G N++ LV RPDE+YCFR     VYY SE+LM+ +TN G D LLS+GT VG+ TKT+KFH+ ITFLDYLAQYA YKVW+KP SEM FLYGNN+VKSGLGR+TE  PQYAGVVV+SM DIPLGFG+AAQ TE+CKDL+P A VVLHQ D+GEYLRVEDE+
Sbjct:    1 MRPLTDDEMTTVFEKISKYIGRNVQHLVTRPDEKYCFRLHGNIVYYCSEKLMRQSTNVGSDELLSIGTAVGKLTKTKKFHLRITFLDYLAQYAKYKVWIKPNSEMSFLYGNNVVKSGLGRITEGTPQYAGVVVYSMNDIPLGFGIAAQATEMCKDLEPTAYVVLHQADIGEYLRVEDEM 179
[Close]
BLAST of NO02G00790 vs. NCBI_GenBank
Match: XP_008893683.1 (hypothetical protein PPTG_02043 [Phytophthora parasitica INRA-310] >ETI44661.1 hypothetical protein F443_10651 [Phytophthora parasitica P1569] >ETK84646.1 hypothetical protein L915_10411 [Phytophthora parasitica] >ETL38082.1 hypothetical protein L916_10305 [Phytophthora parasitica] >ETL91184.1 hypothetical protein L917_10243 [Phytophthora parasitica] >ETM44511.1 hypothetical protein L914_10273 [Phytophthora parasitica] >ETN21979.1 hypothetical protein PPTG_02043 [Phytophthora parasitica INRA-310] >ETO73310.1 hypothetical protein F444_10751 [Phytophthora parasitica P1976] >ETP14470.1 hypothetical protein F441_10591 [Phytophthora parasitica CJ01A1] >ETP42551.1 hypothetical protein F442_10551 [Phytophthora parasitica P10297])

HSP 1 Score: 272.7 bits (696), Expect = 8.200e-70
Identity = 124/179 (69.27%), Postives = 149/179 (83.24%), Query Frame = 0 
Query:    1 MRPLAEEETKKVFERLAKYVGGNLEQLVNRPDERYCFRYMDQRVYYVSERLMKTATNFGRDNLLSLGTCVGRFTKTEKFHISITFLDYLAQYASYKVWVKPQSEMGFLYGNNIVKSGLGRMTEAIPQYAGVVVFSMTDIPLGFGVAAQPTEVCKDLDPGANVVLHQGDVGEYLRVEDEL 180
            MRPL ++E   VFE+++KY+G N++ LV RPDE+YCFR     VYY SE+LM+ +TN G D LLS+GT VG+ TKT+KFH+ ITFLDYLAQYA YKVW+KP SEM FLYGNN+VKSGLGR+TE  PQYAGVVV+SM DIPLGFG+AAQ TE+CKDL+P A VVLHQ D+GEYLRVEDE+
Sbjct:   28 MRPLTDDEMTTVFEKISKYIGRNVQHLVTRPDEKYCFRLHGNIVYYCSEKLMRQSTNVGTDELLSIGTAVGKLTKTKKFHLRITFLDYLAQYAKYKVWIKPNSEMSFLYGNNVVKSGLGRITEGTPQYAGVVVYSMNDIPLGFGIAAQATEMCKDLEPTAYVVLHQADIGEYLRVEDEM 206
[Close]
BLAST of NO02G00790 vs. NCBI_GenBank
Match: KUF88274.1 (hypothetical protein AM588_10002002 [Phytophthora nicotianae] >KUG01637.1 60S ribosome subunit biogenesis protein NIP7 [Phytophthora nicotianae] >POM64679.1 60S ribosome subunit biogenesis protein NIP7 [Phytophthora palmivora var. palmivora])

HSP 1 Score: 272.7 bits (696), Expect = 8.200e-70
Identity = 124/179 (69.27%), Postives = 149/179 (83.24%), Query Frame = 0 
Query:    1 MRPLAEEETKKVFERLAKYVGGNLEQLVNRPDERYCFRYMDQRVYYVSERLMKTATNFGRDNLLSLGTCVGRFTKTEKFHISITFLDYLAQYASYKVWVKPQSEMGFLYGNNIVKSGLGRMTEAIPQYAGVVVFSMTDIPLGFGVAAQPTEVCKDLDPGANVVLHQGDVGEYLRVEDEL 180
            MRPL ++E   VFE+++KY+G N++ LV RPDE+YCFR     VYY SE+LM+ +TN G D LLS+GT VG+ TKT+KFH+ ITFLDYLAQYA YKVW+KP SEM FLYGNN+VKSGLGR+TE  PQYAGVVV+SM DIPLGFG+AAQ TE+CKDL+P A VVLHQ D+GEYLRVEDE+
Sbjct:    1 MRPLTDDEMTTVFEKISKYIGRNVQHLVTRPDEKYCFRLHGNIVYYCSEKLMRQSTNVGTDELLSIGTAVGKLTKTKKFHLRITFLDYLAQYAKYKVWIKPNSEMSFLYGNNVVKSGLGRITEGTPQYAGVVVYSMNDIPLGFGIAAQATEMCKDLEPTAYVVLHQADIGEYLRVEDEM 179
[Close]
BLAST of NO02G00790 vs. NCBI_GenBank
Match: XP_024586208.1 (60s ribosome subunit biogenesis protein nip7 homolog [Plasmopara halstedii] >CEG49839.1 60s ribosome subunit biogenesis protein nip7 homolog [Plasmopara halstedii])

HSP 1 Score: 271.9 bits (694), Expect = 1.400e-69
Identity = 123/179 (68.72%), Postives = 149/179 (83.24%), Query Frame = 0 
Query:    1 MRPLAEEETKKVFERLAKYVGGNLEQLVNRPDERYCFRYMDQRVYYVSERLMKTATNFGRDNLLSLGTCVGRFTKTEKFHISITFLDYLAQYASYKVWVKPQSEMGFLYGNNIVKSGLGRMTEAIPQYAGVVVFSMTDIPLGFGVAAQPTEVCKDLDPGANVVLHQGDVGEYLRVEDEL 180
            MRPL ++E   VFE+++KY+G N++ LV RPDE+YCFR     VYY SE+LM+ +TN G D L+SLGT VG+ TKT+KFH+ ITFLDY+AQYA YKVW+KP SEM FLYGNN+VKSGLGR+TE  PQYAGVVV+SM DIPLGFG+AAQ TE+CKDL+P A VVLHQ D+GEYLRVEDE+
Sbjct:    1 MRPLTDDEMTTVFEKISKYIGRNVQHLVTRPDEKYCFRLHGNIVYYCSEKLMRQSTNIGTDELMSLGTAVGKLTKTKKFHLRITFLDYIAQYAKYKVWIKPNSEMSFLYGNNVVKSGLGRITEGTPQYAGVVVYSMNDIPLGFGIAAQATELCKDLEPTAFVVLHQADIGEYLRVEDEM 179
[Close]
BLAST of NO02G00790 vs. NCBI_GenBank
Match: CBN76642.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 270.4 bits (690), Expect = 4.100e-69
Identity = 125/179 (69.83%), Postives = 149/179 (83.24%), Query Frame = 0 
Query:    1 MRPLAEEETKKVFERLAKYVGGNLEQLVNRPDERYCFRYMDQRVYYVSERLMKTATNFGRDNLLSLGTCVGRFTKTEKFHISITFLDYLAQYASYKVWVKPQSEMGFLYGNNIVKSGLGRMTEAIPQYAGVVVFSMTDIPLGFGVAAQPTEVCKDLDPGANVVLHQGDVGEYLRVEDEL 180
            MRPL ++ETK +FE+LA Y+G N+EQL+NRPDE+ CFR    RVYYVSERLM+ AT+  RD LLSLGTC G+FTK+ KF + IT LDY++QYA YKVWVKP +EM FLYGN++ KSGLGR+TE  P+Y G VV+SM+D+PLGFGVAAQPTE CKDLDP A VVLHQ DVGEYLRVED+L
Sbjct:    1 MRPLTDDETKVLFEKLANYIGKNIEQLINRPDEKCCFRLHKDRVYYVSERLMRQATSVSRDTLLSLGTCFGKFTKSGKFRLHITALDYISQYAKYKVWVKPSAEMSFLYGNHVQKSGLGRITENTPKYGGAVVYSMSDVPLGFGVAAQPTEFCKDLDPTAVVVLHQADVGEYLRVEDDL 179
The following BLAST results are available for this feature:
BLAST of NO02G00790 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005852699.11.400e-9392.2260s ribosome subunit biogenesis protein nip7-like ... [more]
XP_008608455.13.300e-7170.9560S ribosome subunit biogenesis protein NIP7 [Sapr... [more]
OQS06696.17.400e-7170.3960S ribosome subunit biogenesis protein NIP7 [Thra... [more]
OQR91329.19.600e-7170.3960S ribosome subunit biogenesis protein NIP7 [Achl... [more]
GAY02851.13.700e-7070.3960S ribosome subunit biogenesis protein NIP7 [Pyth... [more]
XP_009531520.18.200e-7069.27hypothetical protein PHYSODRAFT_352017 [Phytophtho... [more]
XP_008893683.18.200e-7069.27hypothetical protein PPTG_02043 [Phytophthora para... [more]
KUF88274.18.200e-7069.27hypothetical protein AM588_10002002 [Phytophthora ... [more]
XP_024586208.11.400e-6968.7260s ribosome subunit biogenesis protein nip7 homol... [more]
CBN76642.14.100e-6969.83conserved unknown protein [Ectocarpus siliculosus][more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006678NSK006678Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G00790.1NO02G00790.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|573679gene_657Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100033g20gene93Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G00790.1NO02G00790.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G00790 ID=NO02G00790|Name=NO02G00790|organism=Nannochloropsis oceanica|type=gene|length=4476bp
CGGTTTCGGTTCTAGTTGTGCAAATTTCTTTCTTTTCTGTGCTGATATAT
GTGCGCCTCGTCCATTCTCGTCCCCCTCCTTCGGTTTGCTCTCCTCCTTG
CCTTACCATTGCATCTGGCACATTGAATGCTAAAAACACGAGACGGAATA
TTTACTCTTTGATCCTCTCATCCTCACACATGACACTTGCATCTTCCCCT
ACGAAAAATCGGTGGCAAAATCGTACGCCTCGTCCATGGCTGTTGCTCCC
GACCCTCCCGTTCGCCTAGTTATCTTGCGCGCTTTTTTCTTCTCCGCCGC
CCACTTTTTCTTCGCTGCTTGATTCACTTGAGGGTTCAATCCATCCTCGT
CCACGTTGTCCAGTGTCATCATCATGCTGACGGCGCTTATGGCTGAGCTT
GATGCCACAGCCTTTCCCCTCTTCTTCGGCCCCTTCTCCTTGGGCAAAGA
AGCTGCCGCCACTTTCCCCTTCACTGTCGCTGTCATGGTCGCGGCCACTT
TGCTATTCGTGCCGCGTTGTTGCGAAAGCGCCTGGGCCGCATGCTGCTTC
CTCGCCCCTCCACGAGTCGACCGCGACACTGGTGCCTCACTGACTTCCAC
CTCTCCATCCACCTCCTCTTTCTCCTCACCATTCTCCTCATAATCCATAT
CCATCACCTCCTCCTCCTTACTCTCCTCCTCCTCTATATCCTCCATCATC
CCCCCCCCGCAACACCGCCACTCTCAAATGCCACGAAATTTCCTCCCTCC
TTCCCCCCCTCCTCCAAGAAAGCCATAAGCTTGGCATCGCCCTCCTCAAT
CACTGTGCCGGTATTAAACGCAGCTCCCAGCGTCCCCACTAGCTGCGCCT
CCTCTTCGACCGAGGAGGAAGGTAGGGAAGGTGGTTTCGTATAAAAAGGA
ACCTTACCCGTGTTCCAATCCCGCAGCAACACTCTTGCTGCCGAATTGCG
ATCAGGCACACCCCCCCTTAACAATTTGCCCATCTTCCGGGCAAGCAATG
CCAAGAATCCCTGGACATCTGCAGGGTCAAAGCGAGGGAGGGCGTATATC
ATCATCAGGTCTTGTGAGTCACACCGCTTGAGGAGAGCCGCAACGGCCGT
AGGAGGGTCAGAGAGGGAGTCGACATTCACGCAATTGCGCAGCAGGACCC
CTTCCACGTCCGCGTCATCGAAAACAATACCCGGAGAATCCAAAAGCTTG
ATGTTCTTGTCGAGTTGCACCTCCTGCATGCATTTGGTGAACCCCGGCGT
GCTCGACACACCTGCCGCCTTGGTCCGCTTCAACGAATTAATCACCGACG
ATTTCCCCACGTTAGGGTACCCTACAATCCCAACGCTAATACTGGTCTTG
ATGTCCAAGGACCGGCAATAGTTCTTGAGCAGTTGCATGAGGGCTTCCGC
CCCCACGGAGCCACTGCGGGAGAGGACGTTCGCAGATGCCTTGGAAGCAT
CGCCAGCGTGTTGAGACAGCTGGGATTTCTGTTCCTGCGTGGCGCATTTA
AAGGCTACGGTCGGGTGAAAGCGACGGAGGTATGCGAGCCATTCGCTGAC
GACCTCCTTGGGGACAAGGTCGACTTTGTTGAGGACCAGGACGAGTTTTT
TGTTGGGCTTCCGGAGGATCAGTTCCTCCACGGCTTCAGCACGAGAGCCG
AGGGGGTCACGCGCGTCGAGGACTTCGAGGACGACGTCTGCTTGTTCAAC
CACCTCTTTTAGGTCACGGATGAAGGCCCGACGACTCTGTTGGCCGAGTG
CGCGTTCTTTGGGCGCGCTCGCTGCCTTGGTGGCGTCGGTAATTGAGAAA
GATTGCTGGGCGGCCGTGGCTTGCTTTACCAGGTCCGTCACGTCTTTTCC
GATCAACCCCCCCTGCTTCCGACGTAGGACTGCCTCCTCCTTCTTTTTGA
TTTCTTCGTCTTCCTTGTTACGCTTGGCGGTGGCGAGTTCCTCGAGGAGT
TGCTCCTTGAAGGGCCAGGCGTTGGGAATGCTTGTGTCATTTTTCCGTTG
CCCGATTCCGATAGGAGGGAGGCCCAACTTGGCACGCCGCTTGGTTTCCT
TCTTATTTTTACGTTTGTGCTCCTTGACATGCCGTTCGATCTTGTACTTT
TGCTTGAAGGTCATGCGCTTTGACTTGCCCTTTTTCTTTACCATAATTGA
CTGTTGATATTGTGAAGGAAAGGTAGGCAGAGAGGTTGTGAGAGAGGGCG
GATTAGATACGGTGCCGAGGAGATGAGGATCAAATAATGTCACGGAAAAA
GTCGTTCAGTACATATCATGTCAAATGAATACTCATGAATATGGATAGGG
AAAAATGTTTCGTCGACCATGAACCGTAAACCCTCCATGGAAGAAGTGGG
GGGGACGGCAACCAAAGGATCGCGGTGTTGCTCTCCCCGTGCTAGTTAGA
TCGATTAAACGCTAAGCCATTGACATCGTGGCCTGCATTTGCCCAGATCT
AGGGTGAATGCATATTTGGATTTTTACCCACTAGTCTCTTAATCCTTCCC
TTCCTCTTTCCCTCTCCACCTCGCCATGCCGGCAGACGCTTGCATGCGCA
TGTCCGCTGACCCTGGTGAAATCCCTCATCCGCGCCGACTTGCATGCTTG
CCGCTGTTAAGTACCTACGCAGATAGACAGACCAATTCGCCCGCATGGGG
TGGTGGTTGTAGGGGCGAACAAGTGCGTCTTGGCATAGATACACTCCTGC
CCATCTACCTCCTGCCCCCCTGTCTCCCTTTACAACCCATTCACACACAT
GACACAAACACATACACATACAAACACACAAACTATCATACAGAACATAT
CTACGCACCTAGCCCCGAGAAACCTCTGTAAATTGCTGCGTTGAGCTTCT
ACGGGCTGCCGTCGGCGCTTTTGGATGAAGTATCTCTTGATCCCCTGTGG
TGTGGATGGTTGAGGGGGAGCAAGGGATGTTCAGGACAAGCCAAAGGCAT
CGGGGAAACAAAAGTGATTCGTCTGCAGGTACTCGACGACATTACGCTTA
TGAGATGACTTTTTTGTGGCTGTTTGTAGGAGCACGCGAGTAAAAAGGAC
ATGCCCATGCGGTCTCCTTGCTGCCTCGCCACCCATCGCTTCCGACGTAC
ACATCCCCGCCCATTCACCACACTCAGACCCCAAAATCCTTTGCGCAATT
CGCACCATTCATAGCCACAAACGATTACAGACTACTTCTATCAAAACTGC
TTAACTATACAAACTCATATCGTCCATTCCTTTCCTCCTGCGTTAAAAGA
CACAGGCCATAAGTTTCTCGCTTCGACCTCCCCATCCCACCCCAGCGCAG
CCCATCTCCATCGTTCCCAACACAGCAACATTCTACCCACAAATAATGCG
GCCCCTTGCAGAAGAGGAGACCAAGAAGGTCTTTGAGCGCCTGGCCAAGT
Agtaagtacttcacggtggcgctgtctttccctcttttccccctgtcctt
taatcctgccttctctcgcctctcttctgtcggcaaggcagccatgtccg
gtataaagggtacttctaagaacgacctactaactcctaactcccatatc
cacccctccttccaaaccgtacctataaatccctccttccacacagCGTC
GGCGGAAACCTTGAGCAGCTCGTCAACCGTCCTGACGAACGGTATTGCTT
CCGCTACATGGATCAACGCGTGTATTACGTGAGTGAACGCTTGATGAAGA
CCGCCACGAATTTCGGAAGGGACAATCTCCTATCTCTGGGCACGTGCGTC
GGGCGATTCACCAAGgttcgtgagggcatcgaagaagtattcggtctatc
cctttttattgcatgtcctttgctcgatggtggacccagctcgttcaagc
gaagacgcatgtcagataagaaggaataaatggatgagaggactaaatta
aaaagtaatgaggcacgtttggagaggtgctcgtatagaaatattccctt
ttcgatgtttatggctgcgcttttctcaacctcccaccatccctccctcc
ctgccttgccgtcactcagACCGAGAAATTTCATATCAGCATCACCTTCC
TGGACTACTTGGCCCAGTACGCCAGCTATAAAGTCTGGGTCAAGCCGCAA
AGTGAGATGGGTTTCCTCTACGGCAACAACATAGTCAAATCGGGCCTAGG
GCGCATGACGGAGGCAATCCCGCAATATGCCGGGGTGGTTGTTTTTTCCA
TGACCGATATTCCCTTGGGGTTTGGAGTGGCGGCCCAACCAACGGAAGTT
TGCAAGGATCTGGACCCCGGGGCAAATGTTGTGTTGCACCAGGGAGATGT
GGGTGAGTATTTGAGGGTGGAGGATGAGCTGTCCTGAGGAGGGGGAGGGA
GGATGGGAGGATGGGTAGGAGGGAGGTTGTAGAAAGGGAGATGAGAGAGC
GAGGGAGAGATGGGGTAAAGTGAGAAGAGAGAAGGAAAGAAGGAAATCAT
GTACAGTTATTTACATGGGAGGAGGA
back to top

protein sequence of NO02G00790.1

>NO02G00790.1-protein ID=NO02G00790.1-protein|Name=NO02G00790.1|organism=Nannochloropsis oceanica|type=polypeptide|length=181bp
MRPLAEEETKKVFERLAKYVGGNLEQLVNRPDERYCFRYMDQRVYYVSER
LMKTATNFGRDNLLSLGTCVGRFTKTEKFHISITFLDYLAQYASYKVWVK
PQSEMGFLYGNNIVKSGLGRMTEAIPQYAGVVVFSMTDIPLGFGVAAQPT
EVCKDLDPGANVVLHQGDVGEYLRVEDELS*
back to top
Synonyms
Publications