NO02G00340, NO02G00340 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G00340 vs. NCBI_GenBank
Match: KXZ41388.1 (hypothetical protein GPECTOR_500g462 [Gonium pectorale]) HSP 1 Score: 83.6 bits (205), Expect = 2.500e-12 Identity = 78/277 (28.16%), Postives = 133/277 (48.01%), Query Frame = 0 Query: 277 GFRAYFFSWFRLLDLLTLLLTFASILLRFFLVKGEGEKENIRTLYHMLSAIASWLLWAKLLVYLRGFKETGPLIRMIWQIVKDTRFFLVVLAVSVMGFSNCLYLLFQED--IQREDAMGTTSPIRSSYGSLFHTVLVLFAALNSTSALPSSSPSSF-ALLTSLPVFLFPFPPPHLLSLPPTGNLDYLPFNASHFKVLVSLIYLFYCVCSTIILLNLLIALMGDSYDKVQENALAQGRYEQAVSVLEIEDMLPQRILQDPRFFPRWVQVLRPKPGADG 551 G ++W +D+ T L A+++LR LV E E+ ++ +A+ L K L RG + TGPL+RM+ +++ D RFFLV+L + + F + L+LLF + G + ++YG AL+ + A++T+ + L G+ D+ ++S F + ++++ + TII LNLLIA+M DSY V+E+A A E+A ++E+E +P+ L+ P + RW+ VL DG Sbjct: 442 GLAGAVWNW---IDIATCALILAAVVLR--LVASEAER--------VVLGLAAIALGLKTLKAARGLERTGPLVRMLLRVLLDIRFFLVILGIILGSFCHALFLLFYGTAMLPLPPPDGASDLATAAYGD----------ALSQCVTYGDDYGNYVRAMMTAYRMLL--------------GDYDFAALSSSRFYGVGWVLFVAFTFLVTIIGLNLLIAVMSDSYAVVKEHARAGWLLERARIIVEVEQSVPRSWLERPPYKVRWLHVLTHTEDMDG 681
BLAST of NO02G00340 vs. NCBI_GenBank
Match: XP_004987873.1 (Glrp1 protein [Salpingoeca rosetta] >EGD81003.1 Glrp1 protein [Salpingoeca rosetta]) HSP 1 Score: 82.8 bits (203), Expect = 4.300e-12 Identity = 114/454 (25.11%), Postives = 194/454 (42.73%), Query Frame = 0 Query: 130 YRRLASSKYLLHADISHVYHEITETSGVEVEAALVAFPAALRSGQDSFLRLCCDLYERTGKTWIFELEAPSLILKYKWTAFGRPIYTG-----LLALSLLLALNYSL------ASALLLPLLHSNAPWRRTAGLVWQGLLLANAFPLVCQEYWQWHAQGFRAYFFSWFRLLDLLTLLLTFASILLRFFLVKGEGEKENIRTLYHMLSAIASWLLWAKLLVYLRGFKETGPLIRMIWQIVKDTRFFLVVLAVSVMGFSNCLYLLFQEDIQREDAMGTTSPIRSSYGSLFHTVLVLFAALNSTSALPSSSPSSFALLTSLPVFLFPFPPPHLLSLPPTGNLDYLPFNASHFKVLVSLIYLFYCVCSTIILLNLLIALMGDSYDKVQENALAQGRYEQAVSVLEIEDMLPQRILQDPRFFPRWVQVLRPKPGADGGMVCDAGADRWGGRLRQIYKKI 573 ++RL S L + ++ +TE V + A P S L D TG +F +++YKW G+ + +L+++L+ L + + LL +SN+ +V +L A + QE Q ++ Y+ ++ LD+ ++L F ++L + + + A+A +L W LL YL+ F+ TGPL+RMI I D R+FL+VL +S++ LL +D TT P+ G + +L++F L LL + F + DY+ VL+ ++++ V ++LLNLLIALM DSY+++Q+ A + + +A + E + L Q D R FP W+ VL PK G+ D G+ +W G L + K++ Sbjct: 995 WKRLRESGDLAQLEDANAAPTLTEARIVPLARAAGFLPDG-----SSLLETLVD----TGDAELFGSFIVRAVIQYKWQTSGQRQFLWEAAWYMLSVALITTLTFVFNTSGKDVAQLLGAADNSNSNGSDVVSVVIMLVLGVLAGVDMVQEVRQ--SRLVHGYWLDFWNWLDVTNVVLVF--VVLGTYFAGWHHARAFL--------ALAVYLRWYGLLYYLQPFQSTGPLVRMILAICFDMRYFLLVLGISIVAGWTSFRLLLVDD--------TTLPV-EGLGDPANGLLLMFNML---------------LLADFELDTF--------------DGDYV--------VLLRILFVISMVLVPVVLLNLLIALMSDSYERIQDRADIEFQLLRARILREQDAWLTQEEKMDVRRFPMWLHVLVPK---GSGVGRDGGSVQWQGVLHALKKEV 1378
BLAST of NO02G00340 vs. NCBI_GenBank
Match: XP_004991307.1 (hypothetical protein PTSG_07515 [Salpingoeca rosetta] >EGD76392.1 hypothetical protein PTSG_07515 [Salpingoeca rosetta]) HSP 1 Score: 81.3 bits (199), Expect = 1.200e-11 Identity = 72/245 (29.39%), Postives = 114/245 (46.53%), Query Frame = 0 Query: 326 AIASWLLWAKLLVYLRGFKETGPLIRMIWQIVKDTRFFLVVLAVSVMGFSNCLYLLFQEDIQREDAMGTTSPIRSSYGSLFHTVLVLFAALNSTSALPSSSPSSFALLTSLPVFLFPFPPPHLLSLPPTGNLDYLPFNASHFKVLVSLIYLFYCVCSTIILLNLLIALMGDSYDKVQENALAQGRYEQAVSVLEIEDMLPQRILQDPRFFPRWVQVLRPKPGADGGMVCDAGADRWGGRLRQIYK 571 A+A +L W LL YL+ F+ TGPL+RMI I D R+FL+VL +S++ LL ++D T+ + G + +L++F L LL + F + DY+ L+ ++++ V ++LLNLLIALM D Y+++Q+ A + + +A + E + L Q D R FP W+ VL PK G+ D G+ +W G L + K Sbjct: 582 ALAVYLRWYGLLYYLQPFQSTGPLVRMILAICFDMRYFLLVLGISIVAGWTSFRLLLRDD---------TTLLVEGLGDPANGLLLMFNML---------------LLADFELDTF--------------DGDYV--------ALLRILFVISMVLVPVVLLNLLIALMSDLYERIQDRADIEFQLLRARVLREQDAWLTQEEQMDARRFPMWLHVLVPK---GSGVGRDGGSVQWQGVLHAVKK 777
BLAST of NO02G00340 vs. NCBI_GenBank
Match: XP_011270301.1 (hypothetical protein CAOG_08690 [Capsaspora owczarzaki ATCC 30864] >KJE92295.1 hypothetical protein CAOG_008690 [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 80.1 bits (196), Expect = 2.800e-11 Identity = 90/364 (24.73%), Postives = 153/364 (42.03%), Query Frame = 0 Query: 193 IFELEAPSLILKYKWTAFGRPIYTGLLALSLLLALNYSLASALLLPL--------LHSNAPWRRTAG----LVWQGLLLANAFPLVCQEYWQWHAQGFRAYFFSWFRLLDLLTLLLTFASILLRFFLVKGEGEKENIRTLYHMLSAIASWLLWAKLLVYLRGFKETGPLIRMIWQIVKDTRFFLVVLAVSVMGFSNCLYLLFQEDIQREDAMGTTSPIRSSYGSLFHTVLVLFAALNSTSALPSSSPSSFALLTSLPVFLFPFPPPHLLSLPPTGNLDYLPFNASHFKVLVSLIYLFYCVCSTIILLNLLIALMGDSYDKVQENALAQGRYEQAVSVLEIEDMLPQRILQDPRFFPRWVQVLRP 545 IF ++ YKW AFGR + L + Y++ +AL + S P AG L ++ L L LV + + QG + +FFS + L++++ LL A + LR +T + A+A LLW +L+ + + ++ G L+ + +I++D FL +L + ++ F + Y+LF + A+PS S +++TS + L G+ D+ ++ S VL +I+ + T+ILLN+LIAL+ DSY V+ENA + R A + E E + + Q R P+WV + P Sbjct: 1384 IFRTGIMHAVMDYKWQAFGRNRFLWWLLWYTCFVVLYTIVTALAISRNATCESFPFDSTVPAFENAGDWILLGFECLTLLVDLYLVGYNLVKMYKQG-KMWFFSLWNLVEMIAALLVLAIVPLR----------ATCQTAEAGVVAVAGLLLWFRLVSFAQASQQAGILVFALSRIIQDIVMFLALLILLILSFGHAFYVLF----------------------------------GGSPAVPSYKTWSQSVVTSYRILL--------------GDFDFGEYDDSITPVLAKIIWGIFTALMTVILLNVLIALLSDSYQNVKENAEVEWRISLAGIIAEFEMAMTPK--QRARMAPKWVHFVVP 1686
BLAST of NO02G00340 vs. NCBI_GenBank
Match: KXZ46867.1 (hypothetical protein GPECTOR_40g601 [Gonium pectorale]) HSP 1 Score: 73.9 bits (180), Expect = 2.000e-9 Identity = 67/256 (26.17%), Postives = 118/256 (46.09%), Query Frame = 0 Query: 194 FELEAPSLILKYKWTAFGRPIYTGLLALSLLLALNYSLASALLLPLLHS----------NAPWRRTAGLVWQGLLLANAFPLVCQEYWQWHAQGFRAYFFS--WFRLLDLLTLLLTFASILLRFFLVKGEGEKENIRTLYHMLS------AIASWLLWAKLLVYLRGFKETGPLIRMIWQIVKDTRFFLVVLAVSVMGFSNCLYLLFQEDI-----QREDAMGTTSPIRSSYGSLFHTVLVLFAALNSTSALPSSS 427 + L A +++ KW F R + L L L + +S+ LL ++ + R A LV+ GL V Q+ QW G + +F LLD+++ +L A + L +LV + + T ++S AI S ++WA++L ++ ++ TGPL+RMI I++D FFLV+L +++GF YLLF + ++ SP+ + + + +++L N A+ S S Sbjct: 613 YNLPAVRALIRLKWEVFARSLSLREFGLHLCLVVAFSMFGVLLPEVIQTQPGGGTDVVGGRTGTRAASLVFLGLAACFTLWEVYQKALQWWRLGTHRMWLGNPFFDLLDIISFMLLGAIVPL--YLVCSCNPERDSATQDRLVSALVTTAAIESTMVWARVLYFMLAYQATGPLVRMIVHIIRDISFFLVLLLCTLLGFGLSFYLLFNFSVMVGNFSQDMFWNARSPVLAVALFVLYIIVMLVVLFNLLIAILSDS 866
BLAST of NO02G00340 vs. NCBI_GenBank
Match: PNH11309.1 (WD repeat domain-containing protein [Tetrabaena socialis]) HSP 1 Score: 73.6 bits (179), Expect = 2.600e-9 Identity = 69/263 (26.24%), Postives = 117/263 (44.49%), Query Frame = 0 Query: 269 EYWQWHAQGFRAYFFSWFRLLDLLTLLLTFASILLRFFLVKGEGEKENIRTLYHMLS-------AIASWLLWAKLLVYLRGFKETGPLIRMIWQIVKDTRFFLVVLAVSVMGFSNCLYLLFQEDIQREDAMGTTSPIRSSYGSLFHTVLVLFAALNSTSALPSSSPSSFALLTSLPVFLFPFPPPHLLSLPPTGNLDYLPFNASHFKVLVSLIYLFYCVCSTIILLNLLIALMGDSYDKVQENALAQGRYEQAVSVLEIEDML 525 E QW G+R S + +DL + LT A+ L F +++ E T Y LS A+ S L+W + L +L FK TGPL+RM+ QI D R+F+++L +++GF Y LF A P S + A+ + + L S+ + GNLD F + L L++ Y + +IL+NLLIA++ DSY+++++ + +A+ + ++E ++ Sbjct: 1700 EGMQWRTLGWRRAVASVWNTMDLASYALTAANTGL-FVVLRIATSYELYDTTYLRLSDAVLVTTAVESLLIWVRALWFLLAFKRTGPLVRMVIQIAADVRYFVLLLVATMLGFGLAFYSLFANTSGALAASRARLPGAGSXXXXXXXXXXXXXXYGTDPAIADAFGTFPRTLASMVAMM-------------AGNLDQSLFFRARAPALALLLFGAYVLLVLVILVNLLIAILSDSYERIKDTEEVEFVRGRALMIDDMEAIM 1948
BLAST of NO02G00340 vs. NCBI_GenBank
Match: XP_004987771.1 (Nudt9 protein [Salpingoeca rosetta] >EGD81237.1 Nudt9 protein [Salpingoeca rosetta]) HSP 1 Score: 71.2 bits (173), Expect = 1.300e-8 Identity = 95/347 (27.38%), Postives = 155/347 (44.67%), Query Frame = 0 Query: 188 TGKTWIFELEAPSLILKYKWTAFGRPIY-----TGLLALSLLLALNYSLASALLLPLLHSNAPWRRTAGLVWQGLLLANAFPLVCQEYWQWHAQGFRAYFFSWFRLLDLLTLLLTFASILLRFFLVKGEGEKENIRTLYHMLSAIASWLLWAKLLVYLRGFKETGPLIRMIWQIVKDTRFFLVVLAVSVMGFSNCLYLLFQEDIQREDAMGTTSPIRSSYGSLFHTVLVLFAALNSTSALPSSSPSSFALLTSLPVFLFPFPPPHLLSLPPTGNLDYLPFNASHFKVLVSLIYLFYCVCSTIILLNLLIALMGDSYDKVQENALAQGRYEQAVSVLEIEDMLPQRIL 530 +GK +F+L A ++ +W +GR ++ L++L LL+ L+ ++ + P S + +R + L A E Q R YF + + LD+ LT L F ++ +G+ T L A A + W +LL +L F TGPLI MI +I+KDT FL+VL V+G SN L++L SS G A+ +S ++ S + AL TS + LF G+ D F+ S + +I++ + +ILLNLLIA++ DSY++VQ+ + + +A +L+ + L R L Sbjct: 899 SGKAELFQLLALRAAVQLRWVTYGRTLFFFEGVQYLVSLCLLVFLSLTMTTFGTPP---SGSHYRAVIATISLTSLAA------LNEVKQLLRSRSR-YFSNIWNWLDMARAALT-----LSFCILHLQGD-----TQARTLLAYAVIVQWLRLLYFLLPFDSTGPLIIMILEILKDTYVFLIVLVTVVLGASNSLFVLLH---------------HSSSG---------VASTSSFASADGFSDVALALFTSANMLLF-------------GDYDQTLFDDSSDGISARVIFVAVMFVTLVILLNLLIAILSDSYERVQDRSAMELTLAKA-QILDDQQFLLHRYL 1187
BLAST of NO02G00340 vs. NCBI_GenBank
Match: XP_001749724.1 (hypothetical protein [Monosiga brevicollis MX1] >EDQ85533.1 predicted protein [Monosiga brevicollis MX1]) HSP 1 Score: 70.1 bits (170), Expect = 2.900e-8 Identity = 77/299 (25.75%), Postives = 127/299 (42.47%), Query Frame = 0 Query: 295 LLTFASILLRFFLVKGEGEKENIRTLYHMLSAIASWLLWAKLLVYLRGFKETGPLIRMIWQIVKDTRFFLVVLAVSVMGFSNCLYLLFQEDIQREDAMGTTSPIRSSYGSLFHTVLVLFAALNSTSALPSSSPSSFALLTSLPVFLFPFPPPHLLSLPPTGNLDYLPFNASHFKVLVSLIYLFYCVCSTIILLNLLIALMGDSYDKVQENALAQGRYEQAVSVLEIEDMLPQRILQDPR-FFPRWVQVLRPK------PGADGGMVCDAGADRWGGRLRQIYKKIEHSEKRLSQDIEGL 587 LLT S +L +L K E RT H + A+ +LLW ++L +LR F TG L+R++++++ + FL +L + ++ Y+ F ++++ T SS+ S A+L S +F+ L ++H VLV L +L V T+ +LNLLI LM + +V + YE A + E+E +PQ ++ R FFPRW+ L PK G G DR L Q K ++ + ++ ++ L Sbjct: 1505 LLTVVSTIL--YLTKYE------RT--HDVVAVCIFLLWMQVLYFLRAFAATGALVRIVFRVLGRSMPFLFLLXXXXVAVTSASYVFFGDEVEPPGD-------------------------GDTMQFDSSTSYSNAILNSYSIFVLSEMELFFAQLHDA---------STHNDVLVKLFFLVVSVLITVFMLNLLIGLMSEYMAQVHQEEGDAYPYELATIIAELELSMPQEVVAGNRSFFPRWLHSLVPKNDDHMDDGRGNGGTGAITTDRNSQALAQQIKTMQTQQAEMAANLHKL 1759
BLAST of NO02G00340 vs. NCBI_GenBank
Match: XP_004990765.1 (hypothetical protein PTSG_08519 [Salpingoeca rosetta] >EGD77421.1 hypothetical protein PTSG_08519 [Salpingoeca rosetta]) HSP 1 Score: 65.1 bits (157), Expect = 9.300e-7 Identity = 78/309 (25.24%), Postives = 131/309 (42.39%), Query Frame = 0 Query: 271 WQWHAQGFRAYFF--SWFRLLDLLTLLLTFASILLRFFLVKGEGEKENIRTLYHMLSAIASWLL-----WAKLLVYLRGFKETGPLIRMIWQIVKDTRFFLVVLAVSVMGFSNCLYLLFQEDIQREDAMGTTSPIRSSYGSLFHTVLVLFAALNSTSALPSSSPSSFALLTSLPVFLFPFPPPHLLSLPPTGNLDYLPFNASHFKVLVSLIYLFYCVCSTIILLNLLIALMGDSYDKVQENALAQGRYEQAVSVLEIEDMLPQRILQDPRFFPRWVQVLRPKPGADGGMVCDAGADRWGGRLRQIYKKI 573 ++W G R + + +W+ L L LTF + + G +N ++ ++ A + + F+ TGPL+RMI I D R+FL+VL +S++ LL D T P+ G + +L++F L LL + F + DY+ VL+ ++++ V ++LLNLLIALM DSY+++Q+ A + + +A + E + L D R FP W+ VL PK G+ D G+ +W G L + K++ Sbjct: 195 YKWQTSGLRQFLWEAAWYMLSVALITALTFVFNTSGKNVAQLLGAADNSSNXXXGSDVVSVMIMLVLGVLAGVDMVQEPFQSTGPLVRMILAICFDMRYFLLVLGISIVAGWTSFRLLLLND--------NTLPV-EGLGDPANGLLLMFNLL---------------LLADFDLDTF--------------DGDYV--------VLLRILFVISMVLVPVVLLNLLIALMSDSYERIQDRADIEFQLLRARILREQDAWLTLEGKMDARRFPMWLHVLVPK---GSGVGRDGGSVQWQGVLHALKKEV 454
BLAST of NO02G00340 vs. NCBI_GenBank
Match: CDW73665.1 (wd-40 repeat protein [Stylonychia lemnae]) HSP 1 Score: 65.1 bits (157), Expect = 9.300e-7 Identity = 85/352 (24.15%), Postives = 148/352 (42.05%), Query Frame = 0 Query: 193 IFELEAPSLILKYKWTAFGR--------PIYTGLLALSLLLALNYSLASALLLPLLHSNAPWRRTAGLVWQGLLLANAFPLVCQEYWQWHAQGFRAYFFSWFRLLDLLTLLLTFASILLRFFLVKGEGEKENIRTLYHMLSAIASWLLWAKLLVYLRGFKETGPLIRMIWQIVKDTRFFLVVLAVSVMGFSNCLYLLFQEDIQREDAMGTTSPIRSSYGSLFHTVLVLFAALNSTSALPSSSPSSFALLTSLPVFLFPFPPPHLLSLPPTGNLDYLPFNASHFKVLVSLIYLFYCVCSTIILLNLLIALMGDSYDKVQENALAQGRYEQAVSVLEIEDML--PQRILQDPRF 535 +F LE+ I+K++W + P +A L + + Y S+ + ++ N +V G++L + E Q QGF+ YF ++ LDL LLL ++ L F ++ + ++ R + + A L+ K +LR F +T P IRM+ Q+ D R F+ + ++++GF N YLL + +D + P+ ++F + ++L G+ D F LV I++ + I+LLNLLIA+MGDSY KV + A Q + ++ + +L L Q+I D +F Sbjct: 1488 LFSLESIQTIVKFQWKIYKAAIIRKLFIPFLVYFIAFILSMTMLYQRVSSDEIEIIDDNNKLLNFILVV--GVILPLQLYFLANELRQLINQGFK-YFNEFWNYLDLFQLLL---ALYLSFIMLTQSPQVDSTRV--NSVGAATVIFLYLKFFYFLRLFDKTAPFIRMVVQMAYDIRIFIYIFFLTIIGFGNGFYLLSISNRNEDDRFIKSFPMS-----------IMFV--------------------------------YRMAL---GDFDTEKFGNESI-YLVWFIFILSTMLIMILLLNLLIAIMGDSYGKVTQ-AEEQSKVQEYLQLLLDNSFLIDKQKIFDDVKF 1783 The following BLAST results are available for this feature:
BLAST of NO02G00340 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G00340 ID=NO02G00340|Name=NO02G00340|organism=Nannochloropsis oceanica|type=gene|length=3476bpback to top protein sequence of NO02G00340.2 >NO02G00340.2-protein ID=NO02G00340.2-protein|Name=NO02G00340.2|organism=Nannochloropsis oceanica|type=polypeptide|length=649bpback to top protein sequence of NO02G00340.1 >NO02G00340.1-protein ID=NO02G00340.1-protein|Name=NO02G00340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=612bpback to top Synonyms
Publications
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