NO02G00340, NO02G00340 (gene) Nannochloropsis oceanica

Overview
NameNO02G00340
Unique NameNO02G00340
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3476
Alignment locationchr2:118198..121673 -

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Properties
Property NameValue
DescriptionWd-40 repeat protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:118198..121673 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR024862TRPV
IPR005821Ion_trans_dom
Vocabulary: Biological Process
TermDefinition
GO:0006811ion transport
GO:0055085transmembrane transport
GO:0006810transport
Vocabulary: Molecular Function
TermDefinition
GO:0005216ion channel activity
GO:0005215transporter activity
Homology
BLAST of NO02G00340 vs. NCBI_GenBank
Match: KXZ41388.1 (hypothetical protein GPECTOR_500g462 [Gonium pectorale])

HSP 1 Score: 83.6 bits (205), Expect = 2.500e-12
Identity = 78/277 (28.16%), Postives = 133/277 (48.01%), Query Frame = 0
Query:  277 GFRAYFFSWFRLLDLLTLLLTFASILLRFFLVKGEGEKENIRTLYHMLSAIASWLLWAKLLVYLRGFKETGPLIRMIWQIVKDTRFFLVVLAVSVMGFSNCLYLLFQED--IQREDAMGTTSPIRSSYGSLFHTVLVLFAALNSTSALPSSSPSSF-ALLTSLPVFLFPFPPPHLLSLPPTGNLDYLPFNASHFKVLVSLIYLFYCVCSTIILLNLLIALMGDSYDKVQENALAQGRYEQAVSVLEIEDMLPQRILQDPRFFPRWVQVLRPKPGADG 551
            G     ++W   +D+ T  L  A+++LR  LV  E E+        ++  +A+  L  K L   RG + TGPL+RM+ +++ D RFFLV+L + +  F + L+LLF     +      G +    ++YG           AL+          +   A++T+  + L              G+ D+   ++S F  +  ++++ +    TII LNLLIA+M DSY  V+E+A A    E+A  ++E+E  +P+  L+ P +  RW+ VL      DG
Sbjct:  442 GLAGAVWNW---IDIATCALILAAVVLR--LVASEAER--------VVLGLAAIALGLKTLKAARGLERTGPLVRMLLRVLLDIRFFLVILGIILGSFCHALFLLFYGTAMLPLPPPDGASDLATAAYGD----------ALSQCVTYGDDYGNYVRAMMTAYRMLL--------------GDYDFAALSSSRFYGVGWVLFVAFTFLVTIIGLNLLIAVMSDSYAVVKEHARAGWLLERARIIVEVEQSVPRSWLERPPYKVRWLHVLTHTEDMDG 681          
BLAST of NO02G00340 vs. NCBI_GenBank
Match: XP_004987873.1 (Glrp1 protein [Salpingoeca rosetta] >EGD81003.1 Glrp1 protein [Salpingoeca rosetta])

HSP 1 Score: 82.8 bits (203), Expect = 4.300e-12
Identity = 114/454 (25.11%), Postives = 194/454 (42.73%), Query Frame = 0
Query:  130 YRRLASSKYLLHADISHVYHEITETSGVEVEAALVAFPAALRSGQDSFLRLCCDLYERTGKTWIFELEAPSLILKYKWTAFGRPIYTG-----LLALSLLLALNYSL------ASALLLPLLHSNAPWRRTAGLVWQGLLLANAFPLVCQEYWQWHAQGFRAYFFSWFRLLDLLTLLLTFASILLRFFLVKGEGEKENIRTLYHMLSAIASWLLWAKLLVYLRGFKETGPLIRMIWQIVKDTRFFLVVLAVSVMGFSNCLYLLFQEDIQREDAMGTTSPIRSSYGSLFHTVLVLFAALNSTSALPSSSPSSFALLTSLPVFLFPFPPPHLLSLPPTGNLDYLPFNASHFKVLVSLIYLFYCVCSTIILLNLLIALMGDSYDKVQENALAQGRYEQAVSVLEIEDMLPQRILQDPRFFPRWVQVLRPKPGADGGMVCDAGADRWGGRLRQIYKKI 573
            ++RL  S  L   + ++    +TE   V +  A    P        S L    D    TG   +F       +++YKW   G+  +       +L+++L+  L +         + LL    +SN+       +V   +L   A   + QE  Q  ++    Y+  ++  LD+  ++L F  ++L  +       +  +        A+A +L W  LL YL+ F+ TGPL+RMI  I  D R+FL+VL +S++       LL  +D        TT P+    G   + +L++F  L               LL    +  F              + DY+        VL+ ++++   V   ++LLNLLIALM DSY+++Q+ A  + +  +A  + E +  L Q    D R FP W+ VL PK     G+  D G+ +W G L  + K++
Sbjct:  995 WKRLRESGDLAQLEDANAAPTLTEARIVPLARAAGFLPDG-----SSLLETLVD----TGDAELFGSFIVRAVIQYKWQTSGQRQFLWEAAWYMLSVALITTLTFVFNTSGKDVAQLLGAADNSNSNGSDVVSVVIMLVLGVLAGVDMVQEVRQ--SRLVHGYWLDFWNWLDVTNVVLVF--VVLGTYFAGWHHARAFL--------ALAVYLRWYGLLYYLQPFQSTGPLVRMILAICFDMRYFLLVLGISIVAGWTSFRLLLVDD--------TTLPV-EGLGDPANGLLLMFNML---------------LLADFELDTF--------------DGDYV--------VLLRILFVISMVLVPVVLLNLLIALMSDSYERIQDRADIEFQLLRARILREQDAWLTQEEKMDVRRFPMWLHVLVPK---GSGVGRDGGSVQWQGVLHALKKEV 1378          
BLAST of NO02G00340 vs. NCBI_GenBank
Match: XP_004991307.1 (hypothetical protein PTSG_07515 [Salpingoeca rosetta] >EGD76392.1 hypothetical protein PTSG_07515 [Salpingoeca rosetta])

HSP 1 Score: 81.3 bits (199), Expect = 1.200e-11
Identity = 72/245 (29.39%), Postives = 114/245 (46.53%), Query Frame = 0
Query:  326 AIASWLLWAKLLVYLRGFKETGPLIRMIWQIVKDTRFFLVVLAVSVMGFSNCLYLLFQEDIQREDAMGTTSPIRSSYGSLFHTVLVLFAALNSTSALPSSSPSSFALLTSLPVFLFPFPPPHLLSLPPTGNLDYLPFNASHFKVLVSLIYLFYCVCSTIILLNLLIALMGDSYDKVQENALAQGRYEQAVSVLEIEDMLPQRILQDPRFFPRWVQVLRPKPGADGGMVCDAGADRWGGRLRQIYK 571
            A+A +L W  LL YL+ F+ TGPL+RMI  I  D R+FL+VL +S++       LL ++D         T+ +    G   + +L++F  L               LL    +  F              + DY+         L+ ++++   V   ++LLNLLIALM D Y+++Q+ A  + +  +A  + E +  L Q    D R FP W+ VL PK     G+  D G+ +W G L  + K
Sbjct:  582 ALAVYLRWYGLLYYLQPFQSTGPLVRMILAICFDMRYFLLVLGISIVAGWTSFRLLLRDD---------TTLLVEGLGDPANGLLLMFNML---------------LLADFELDTF--------------DGDYV--------ALLRILFVISMVLVPVVLLNLLIALMSDLYERIQDRADIEFQLLRARVLREQDAWLTQEEQMDARRFPMWLHVLVPK---GSGVGRDGGSVQWQGVLHAVKK 777          
BLAST of NO02G00340 vs. NCBI_GenBank
Match: XP_011270301.1 (hypothetical protein CAOG_08690 [Capsaspora owczarzaki ATCC 30864] >KJE92295.1 hypothetical protein CAOG_008690 [Capsaspora owczarzaki ATCC 30864])

HSP 1 Score: 80.1 bits (196), Expect = 2.800e-11
Identity = 90/364 (24.73%), Postives = 153/364 (42.03%), Query Frame = 0
Query:  193 IFELEAPSLILKYKWTAFGRPIYTGLLALSLLLALNYSLASALLLPL--------LHSNAPWRRTAG----LVWQGLLLANAFPLVCQEYWQWHAQGFRAYFFSWFRLLDLLTLLLTFASILLRFFLVKGEGEKENIRTLYHMLSAIASWLLWAKLLVYLRGFKETGPLIRMIWQIVKDTRFFLVVLAVSVMGFSNCLYLLFQEDIQREDAMGTTSPIRSSYGSLFHTVLVLFAALNSTSALPSSSPSSFALLTSLPVFLFPFPPPHLLSLPPTGNLDYLPFNASHFKVLVSLIYLFYCVCSTIILLNLLIALMGDSYDKVQENALAQGRYEQAVSVLEIEDMLPQRILQDPRFFPRWVQVLRP 545
            IF       ++ YKW AFGR  +   L       + Y++ +AL +            S  P    AG    L ++ L L     LV     + + QG + +FFS + L++++  LL  A + LR             +T    + A+A  LLW +L+ + +  ++ G L+  + +I++D   FL +L + ++ F +  Y+LF                                    + A+PS    S +++TS  + L              G+ D+  ++ S   VL  +I+  +    T+ILLN+LIAL+ DSY  V+ENA  + R   A  + E E  +  +  Q  R  P+WV  + P
Sbjct: 1384 IFRTGIMHAVMDYKWQAFGRNRFLWWLLWYTCFVVLYTIVTALAISRNATCESFPFDSTVPAFENAGDWILLGFECLTLLVDLYLVGYNLVKMYKQG-KMWFFSLWNLVEMIAALLVLAIVPLR----------ATCQTAEAGVVAVAGLLLWFRLVSFAQASQQAGILVFALSRIIQDIVMFLALLILLILSFGHAFYVLF----------------------------------GGSPAVPSYKTWSQSVVTSYRILL--------------GDFDFGEYDDSITPVLAKIIWGIFTALMTVILLNVLIALLSDSYQNVKENAEVEWRISLAGIIAEFEMAMTPK--QRARMAPKWVHFVVP 1686          
BLAST of NO02G00340 vs. NCBI_GenBank
Match: KXZ46867.1 (hypothetical protein GPECTOR_40g601 [Gonium pectorale])

HSP 1 Score: 73.9 bits (180), Expect = 2.000e-9
Identity = 67/256 (26.17%), Postives = 118/256 (46.09%), Query Frame = 0
Query:  194 FELEAPSLILKYKWTAFGRPIYTGLLALSLLLALNYSLASALLLPLLHS----------NAPWRRTAGLVWQGLLLANAFPLVCQEYWQWHAQGFRAYFFS--WFRLLDLLTLLLTFASILLRFFLVKGEGEKENIRTLYHMLS------AIASWLLWAKLLVYLRGFKETGPLIRMIWQIVKDTRFFLVVLAVSVMGFSNCLYLLFQEDI-----QREDAMGTTSPIRSSYGSLFHTVLVLFAALNSTSALPSSS 427
            + L A   +++ KW  F R +      L L L + +S+   LL  ++ +               R A LV+ GL        V Q+  QW   G    +    +F LLD+++ +L  A + L  +LV     + +  T   ++S      AI S ++WA++L ++  ++ TGPL+RMI  I++D  FFLV+L  +++GF    YLLF   +      ++      SP+ +    + + +++L    N   A+ S S
Sbjct:  613 YNLPAVRALIRLKWEVFARSLSLREFGLHLCLVVAFSMFGVLLPEVIQTQPGGGTDVVGGRTGTRAASLVFLGLAACFTLWEVYQKALQWWRLGTHRMWLGNPFFDLLDIISFMLLGAIVPL--YLVCSCNPERDSATQDRLVSALVTTAAIESTMVWARVLYFMLAYQATGPLVRMIVHIIRDISFFLVLLLCTLLGFGLSFYLLFNFSVMVGNFSQDMFWNARSPVLAVALFVLYIIVMLVVLFNLLIAILSDS 866          
BLAST of NO02G00340 vs. NCBI_GenBank
Match: PNH11309.1 (WD repeat domain-containing protein [Tetrabaena socialis])

HSP 1 Score: 73.6 bits (179), Expect = 2.600e-9
Identity = 69/263 (26.24%), Postives = 117/263 (44.49%), Query Frame = 0
Query:  269 EYWQWHAQGFRAYFFSWFRLLDLLTLLLTFASILLRFFLVKGEGEKENIRTLYHMLS-------AIASWLLWAKLLVYLRGFKETGPLIRMIWQIVKDTRFFLVVLAVSVMGFSNCLYLLFQEDIQREDAMGTTSPIRSSYGSLFHTVLVLFAALNSTSALPSSSPSSFALLTSLPVFLFPFPPPHLLSLPPTGNLDYLPFNASHFKVLVSLIYLFYCVCSTIILLNLLIALMGDSYDKVQENALAQGRYEQAVSVLEIEDML 525
            E  QW   G+R    S +  +DL +  LT A+  L F +++     E   T Y  LS       A+ S L+W + L +L  FK TGPL+RM+ QI  D R+F+++L  +++GF    Y LF        A     P   S                +  A+  +  +    L S+   +              GNLD   F  +    L  L++  Y +   +IL+NLLIA++ DSY+++++    +    +A+ + ++E ++
Sbjct: 1700 EGMQWRTLGWRRAVASVWNTMDLASYALTAANTGL-FVVLRIATSYELYDTTYLRLSDAVLVTTAVESLLIWVRALWFLLAFKRTGPLVRMVIQIAADVRYFVLLLVATMLGFGLAFYSLFANTSGALAASRARLPGAGSXXXXXXXXXXXXXXYGTDPAIADAFGTFPRTLASMVAMM-------------AGNLDQSLFFRARAPALALLLFGAYVLLVLVILVNLLIAILSDSYERIKDTEEVEFVRGRALMIDDMEAIM 1948          
BLAST of NO02G00340 vs. NCBI_GenBank
Match: XP_004987771.1 (Nudt9 protein [Salpingoeca rosetta] >EGD81237.1 Nudt9 protein [Salpingoeca rosetta])

HSP 1 Score: 71.2 bits (173), Expect = 1.300e-8
Identity = 95/347 (27.38%), Postives = 155/347 (44.67%), Query Frame = 0
Query:  188 TGKTWIFELEAPSLILKYKWTAFGRPIY-----TGLLALSLLLALNYSLASALLLPLLHSNAPWRRTAGLVWQGLLLANAFPLVCQEYWQWHAQGFRAYFFSWFRLLDLLTLLLTFASILLRFFLVKGEGEKENIRTLYHMLSAIASWLLWAKLLVYLRGFKETGPLIRMIWQIVKDTRFFLVVLAVSVMGFSNCLYLLFQEDIQREDAMGTTSPIRSSYGSLFHTVLVLFAALNSTSALPSSSPSSFALLTSLPVFLFPFPPPHLLSLPPTGNLDYLPFNASHFKVLVSLIYLFYCVCSTIILLNLLIALMGDSYDKVQENALAQGRYEQAVSVLEIEDMLPQRIL 530
            +GK  +F+L A    ++ +W  +GR ++       L++L LL+ L+ ++ +    P   S + +R     +    L A        E  Q      R YF + +  LD+    LT     L F ++  +G+     T    L A A  + W +LL +L  F  TGPLI MI +I+KDT  FL+VL   V+G SN L++L                  SS G          A+ +S ++    S  + AL TS  + LF             G+ D   F+ S   +   +I++     + +ILLNLLIA++ DSY++VQ+ +  +    +A  +L+ +  L  R L
Sbjct:  899 SGKAELFQLLALRAAVQLRWVTYGRTLFFFEGVQYLVSLCLLVFLSLTMTTFGTPP---SGSHYRAVIATISLTSLAA------LNEVKQLLRSRSR-YFSNIWNWLDMARAALT-----LSFCILHLQGD-----TQARTLLAYAVIVQWLRLLYFLLPFDSTGPLIIMILEILKDTYVFLIVLVTVVLGASNSLFVLLH---------------HSSSG---------VASTSSFASADGFSDVALALFTSANMLLF-------------GDYDQTLFDDSSDGISARVIFVAVMFVTLVILLNLLIAILSDSYERVQDRSAMELTLAKA-QILDDQQFLLHRYL 1187          
BLAST of NO02G00340 vs. NCBI_GenBank
Match: XP_001749724.1 (hypothetical protein [Monosiga brevicollis MX1] >EDQ85533.1 predicted protein [Monosiga brevicollis MX1])

HSP 1 Score: 70.1 bits (170), Expect = 2.900e-8
Identity = 77/299 (25.75%), Postives = 127/299 (42.47%), Query Frame = 0
Query:  295 LLTFASILLRFFLVKGEGEKENIRTLYHMLSAIASWLLWAKLLVYLRGFKETGPLIRMIWQIVKDTRFFLVVLAVSVMGFSNCLYLLFQEDIQREDAMGTTSPIRSSYGSLFHTVLVLFAALNSTSALPSSSPSSFALLTSLPVFLFPFPPPHLLSLPPTGNLDYLPFNASHFKVLVSLIYLFYCVCSTIILLNLLIALMGDSYDKVQENALAQGRYEQAVSVLEIEDMLPQRILQDPR-FFPRWVQVLRPK------PGADGGMVCDAGADRWGGRLRQIYKKIEHSEKRLSQDIEGL 587
            LLT  S +L  +L K E      RT  H + A+  +LLW ++L +LR F  TG L+R++++++  +  FL +L    +  ++  Y+ F ++++                               T    SS+  S A+L S  +F+          L            ++H  VLV L +L   V  T+ +LNLLI LM +   +V +       YE A  + E+E  +PQ ++   R FFPRW+  L PK       G   G       DR    L Q  K ++  +  ++ ++  L
Sbjct: 1505 LLTVVSTIL--YLTKYE------RT--HDVVAVCIFLLWMQVLYFLRAFAATGALVRIVFRVLGRSMPFLFLLXXXXVAVTSASYVFFGDEVEPPGD-------------------------GDTMQFDSSTSYSNAILNSYSIFVLSEMELFFAQLHDA---------STHNDVLVKLFFLVVSVLITVFMLNLLIGLMSEYMAQVHQEEGDAYPYELATIIAELELSMPQEVVAGNRSFFPRWLHSLVPKNDDHMDDGRGNGGTGAITTDRNSQALAQQIKTMQTQQAEMAANLHKL 1759          
BLAST of NO02G00340 vs. NCBI_GenBank
Match: XP_004990765.1 (hypothetical protein PTSG_08519 [Salpingoeca rosetta] >EGD77421.1 hypothetical protein PTSG_08519 [Salpingoeca rosetta])

HSP 1 Score: 65.1 bits (157), Expect = 9.300e-7
Identity = 78/309 (25.24%), Postives = 131/309 (42.39%), Query Frame = 0
Query:  271 WQWHAQGFRAYFF--SWFRLLDLLTLLLTFASILLRFFLVKGEGEKENIRTLYHMLSAIASWLL-----WAKLLVYLRGFKETGPLIRMIWQIVKDTRFFLVVLAVSVMGFSNCLYLLFQEDIQREDAMGTTSPIRSSYGSLFHTVLVLFAALNSTSALPSSSPSSFALLTSLPVFLFPFPPPHLLSLPPTGNLDYLPFNASHFKVLVSLIYLFYCVCSTIILLNLLIALMGDSYDKVQENALAQGRYEQAVSVLEIEDMLPQRILQDPRFFPRWVQVLRPKPGADGGMVCDAGADRWGGRLRQIYKKI 573
            ++W   G R + +  +W+ L   L   LTF        + +  G  +N          ++  ++      A + +    F+ TGPL+RMI  I  D R+FL+VL +S++       LL   D         T P+    G   + +L++F  L               LL    +  F              + DY+        VL+ ++++   V   ++LLNLLIALM DSY+++Q+ A  + +  +A  + E +  L      D R FP W+ VL PK     G+  D G+ +W G L  + K++
Sbjct:  195 YKWQTSGLRQFLWEAAWYMLSVALITALTFVFNTSGKNVAQLLGAADNSSNXXXGSDVVSVMIMLVLGVLAGVDMVQEPFQSTGPLVRMILAICFDMRYFLLVLGISIVAGWTSFRLLLLND--------NTLPV-EGLGDPANGLLLMFNLL---------------LLADFDLDTF--------------DGDYV--------VLLRILFVISMVLVPVVLLNLLIALMSDSYERIQDRADIEFQLLRARILREQDAWLTLEGKMDARRFPMWLHVLVPK---GSGVGRDGGSVQWQGVLHALKKEV 454          
BLAST of NO02G00340 vs. NCBI_GenBank
Match: CDW73665.1 (wd-40 repeat protein [Stylonychia lemnae])

HSP 1 Score: 65.1 bits (157), Expect = 9.300e-7
Identity = 85/352 (24.15%), Postives = 148/352 (42.05%), Query Frame = 0
Query:  193 IFELEAPSLILKYKWTAFGR--------PIYTGLLALSLLLALNYSLASALLLPLLHSNAPWRRTAGLVWQGLLLANAFPLVCQEYWQWHAQGFRAYFFSWFRLLDLLTLLLTFASILLRFFLVKGEGEKENIRTLYHMLSAIASWLLWAKLLVYLRGFKETGPLIRMIWQIVKDTRFFLVVLAVSVMGFSNCLYLLFQEDIQREDAMGTTSPIRSSYGSLFHTVLVLFAALNSTSALPSSSPSSFALLTSLPVFLFPFPPPHLLSLPPTGNLDYLPFNASHFKVLVSLIYLFYCVCSTIILLNLLIALMGDSYDKVQENALAQGRYEQAVSVLEIEDML--PQRILQDPRF 535
            +F LE+   I+K++W  +          P     +A  L + + Y   S+  + ++  N        +V  G++L      +  E  Q   QGF+ YF  ++  LDL  LLL   ++ L F ++    + ++ R   + + A     L+ K   +LR F +T P IRM+ Q+  D R F+ +  ++++GF N  YLL   +   +D    + P+            ++F                                 + ++L   G+ D   F       LV  I++   +   I+LLNLLIA+MGDSY KV + A  Q + ++ + +L     L   Q+I  D +F
Sbjct: 1488 LFSLESIQTIVKFQWKIYKAAIIRKLFIPFLVYFIAFILSMTMLYQRVSSDEIEIIDDNNKLLNFILVV--GVILPLQLYFLANELRQLINQGFK-YFNEFWNYLDLFQLLL---ALYLSFIMLTQSPQVDSTRV--NSVGAATVIFLYLKFFYFLRLFDKTAPFIRMVVQMAYDIRIFIYIFFLTIIGFGNGFYLLSISNRNEDDRFIKSFPMS-----------IMFV--------------------------------YRMAL---GDFDTEKFGNESI-YLVWFIFILSTMLIMILLLNLLIAIMGDSYGKVTQ-AEEQSKVQEYLQLLLDNSFLIDKQKIFDDVKF 1783          
The following BLAST results are available for this feature:
BLAST of NO02G00340 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
KXZ41388.12.500e-1228.16hypothetical protein GPECTOR_500g462 [Gonium pecto... [more]
XP_004987873.14.300e-1225.11Glrp1 protein [Salpingoeca rosetta] >EGD81003.1 Gl... [more]
XP_004991307.11.200e-1129.39hypothetical protein PTSG_07515 [Salpingoeca roset... [more]
XP_011270301.12.800e-1124.73hypothetical protein CAOG_08690 [Capsaspora owczar... [more]
KXZ46867.12.000e-926.17hypothetical protein GPECTOR_40g601 [Gonium pector... [more]
PNH11309.12.600e-926.24WD repeat domain-containing protein [Tetrabaena so... [more]
XP_004987771.11.300e-827.38Nudt9 protein [Salpingoeca rosetta] >EGD81237.1 Nu... [more]
XP_001749724.12.900e-825.75hypothetical protein [Monosiga brevicollis MX1] >E... [more]
XP_004990765.19.300e-725.24hypothetical protein PTSG_08519 [Salpingoeca roset... [more]
CDW73665.19.300e-724.15wd-40 repeat protein [Stylonychia lemnae][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR068ncniR068Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006612NSK006612Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G00340.2NO02G00340.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO02G00340.1NO02G00340.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|610140gene_10195Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100836g2gene40Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G00340.2NO02G00340.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO02G00340.1NO02G00340.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G00340 ID=NO02G00340|Name=NO02G00340|organism=Nannochloropsis oceanica|type=gene|length=3476bp
AAGAAACTCAAGAACATGAAAGAAAGACGTAGTAAAAAATGGGCAGAGGG
AGGGAGGGGAGGAGGGAACACGAATAGCTGCTCGTGCATTCAAACATTTT
CATACTTTCCTCCTCCCACTTATACCTATTTATACATTGCACCTTCCTAT
GTATGCATGTATATGTACGTACTCATGTACGATAGAATACCCCTCCCTCC
TGGAAACGTCGGCGGTGCGGAGTTTTTTCAACTTGCAGgtacgggaggga
gggagggagggagggagggaggggatacaaatgtacgcccgaccaagccc
aacacatctggattctatccttcccttccccctcttctccttccacttcc
tccgcccagCCCTCCTGTGCAGGCGTCGTTGACTTGGAGGCGGAAGAATC
CGATTACCGAGCGAACCTTGGGCCGGGGGAGAGCAAGACCCTCGGGTCGG
CAGAGGCATTCCCTCTCGGgtgaggagggagggagggaggaggggaggaa
gggagggagggaggccgggggagagcaagaccctcgggtcggcaaaggca
tctccttccctccctccctcacttccttcttccctccctccctccctccc
tccctccctccctctcttcctccctccctctttccgcagCTTCTGGGCCG
CGCACATCAACAACAAGACAAGGAAACCCTCGCTCTTTTCTAAGGAGGGG
CTGCGGCTCCTCACGTCTCCCCGGAGATGGGAGGGCGAGGGGGAGGGAGG
GATAGAGGGGGGGGTGCTGAGGGGGAGCAGTGGCATGCTGCCTTCTCCTG
GAGGAGGGGAAGGAGGAGACGGGAGGTATAGACGACTCGCCAGCAGCAAA
TATCTGCTCCATGCGGACATTTCGCATGTgtaggtgaagggagggaagga
gggagggaaggagggagggaaggagggagggagcactaatggcacttcgg
ccataaaataatccacatttcgctctctcttcttcccccgtcgccttccg
cagGTACCACGAAATCACCGAGACGAGCGGTGTGGAGGTGGAGGCCGCAC
TGGTCGCTTTCCCGGCCGCCCTCCGgtacgacccaccccgcccccctccc
tccctccctccctcccttccgctgtcctcacatccactccccccttccct
gcccagCTCTGGCCAAGATTCTTTCCTGAGACTGTGCTGTGATCTGTACG
AGCGCACGGGCAAGACGTGGATCTTCGAGCTGGAGGCCCCTTCGCTCATC
CTCAAGTACAAATGgtgagggagcgacggagggagggagagggtgggagg
gtattgaatgagtgtcatccgtcgtgctcttgtatcttcaagaatgaagc
tctaaccttcctccgtcccttcctccctcccgccctcagGACTGCCTTCG
GCCGGCCCATCTACACAGGACTCCTCGCCCTCTCCCTCCTCCTGGCCCTC
AACTACTCCCTCGCTTCCGCCCTCCTCCTCCCCCTCCTCCACTCCAACGC
TCCCTGGAGACGCACCGCGGGCCTGGTCTGGCAAGGACTCTTGCTCGCGA
ACGCCTTCCCGTTGGTATGTCAGGAATACTGGCAGTGGCACGCGCAGgta
gggggggggggagggagggagggagggtagagaacgtcagaccaacctac
atcatcctcatccttcttgactctctctccctctctctctccttcgttct
ctccttctctccctcccttagGGCTTCCGCGCCTACTTCTTCTCTTGGTT
CCGTCTGCTGGACCTGCTGACACTCCTCCTGACTTTTGCCTCGATCCTCC
TCCGCTTCTTCTTGGTGAAGGGAGAGGGAGAAAAAGAGAACATTCGCACT
CTTTATCACATGCTTTCAGgtactgtgagagggagggagggggggagggg
gggtagaaaggaagaagcgcatgcactcaaaacaatgtcggtcctccctc
cctccctccttcccctctcttcctcccttcctcccccccttccgcagCCA
TCGCCTCCTGGCTGCTGTGGGCCAAGCTCCTTGTCTATCTAAGAGGTTTT
AAGGAGACTGGGCCCTTGATTCGAATGATCTGGCAGATCGTCAAGGACAC
CCGCTTTTTCCTGGTGgtgcgtgaaacccttccctccctccctccctccc
tccctccctccctccctccctccttctctgcctgcttccaaccaacatga
ttgttgggatcacgggcgtggcgaacctcacattccttccgtccctccct
ccctccctccctccctccttcttctcaagGTCCTGGCCGTCTCTGTGATG
GGCTTCAGCAATTGCCTTTACCTCCTCTTCCAAGAAGACATTCAGCGCGA
AGACGCCATGGGCACGACAAGCCCCATCCGATCGAGgtagggagggaagg
aggggtgcctaaccgtggcttgtcggtataaatcattgatccttgatcct
ttttcgctccacatcctcattttcatcctccggcccatactcctgtcctc
ggcacagCTACGGCTCCCTCTTCCATACGGTCCTCGTCCTCTTCGCCGCT
CTCAACAGTACGTCCGCCCTTCCTTCTTCCTCGCCGTCTTCCTTTGCCCT
TCTCACCTCCCTTCCCGTCTTCCTTTTCCCTTTCCCTCCTCCTCACCTCC
TTTCCCTCCCTCCCACAGGTAACCTGGACTACCTGCCCTTCAACGCCTCC
CATTTCAAGGTCCTGGTCTCGCTCATCTACCTCTTTTACTGCGTGTGTAG
CACCATTATCTTGCTGAACCTGCTCATCGCCCTCATGGGAGACTCCTATG
ACAAGGTTCAGGAGAACGCCCTGGCCCAAGGCAGATACGAACAGgtggac
agaaagggagagagggaaggaaagttggagggaagagggaaagaagaagg
ggttgtgacacattccagattccaggtatattttttaatgctgcttcatc
ccatccctttattgtcctagGCCGTTTCCGTGCTAGAGATTGAAGACATG
CTCCCCCAACGCATTCTGCAGGATCCCCGCTTCTTCCCGCGgtaggtccc
tccttccctccgcccagcgtctctttctctttatttatcagcttccatct
aactctctcttttcgtttcatccctccacatccatcaagGTGGGTGCAAG
TTCTCCGGCCCAAGCCCGGGGCTGACGGCGGCATGGTGTGTGACGCTGGT
GCGGATCGGTGGGGTGGTCGACTCAGACAGATTTACAAAAAGATAGAACA
CAGCGAAAAACGATTGAGTCAAGACATTGAGGGGTTGTTTAACGCGGTGG
GGAGGGAGAGGAAAGAAGGAGGAGGGGTGATGGAGGGAGGGGTGGGGACG
CGGTTGGCGCGCTTGGAGGACAACGTGGAGGGCCTGCAGGGCAAGTTGGA
CCAAATTTTGGCCATGTTGCACTCAGCGGTCCAGGACGACGATACCTCTG
ACGAGGAAGACGAGACAAGCCGATAG
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protein sequence of NO02G00340.2

>NO02G00340.2-protein ID=NO02G00340.2-protein|Name=NO02G00340.2|organism=Nannochloropsis oceanica|type=polypeptide|length=649bp
MYACICTYSCTIEYPSLLETSAVRSFFNLQPSCAGVVDLEAEESDYRANL
GPGESKTLGSAEAFPLGFWAAHINNKTRKPSLFSKEGLRLLTSPRRWEGE
GEGGIEGGVLRGSSGMLPSPGGGEGGDGRYRRLASSKYLLHADISHVYHE
ITETSGVEVEAALVAFPAALRSGQDSFLRLCCDLYERTGKTWIFELEAPS
LILKYKWTAFGRPIYTGLLALSLLLALNYSLASALLLPLLHSNAPWRRTA
GLVWQGLLLANAFPLVCQEYWQWHAQGFRAYFFSWFRLLDLLTLLLTFAS
ILLRFFLVKGEGEKENIRTLYHMLSAIASWLLWAKLLVYLRGFKETGPLI
RMIWQIVKDTRFFLVVLAVSVMGFSNCLYLLFQEDIQREDAMGTTSPIRS
SYGSLFHTVLVLFAALNSTSALPSSSPSSFALLTSLPVFLFPFPPPHLLS
LPPTGNLDYLPFNASHFKVLVSLIYLFYCVCSTIILLNLLIALMGDSYDK
VQENALAQGRYEQAVSVLEIEDMLPQRILQDPRFFPRWVQVLRPKPGADG
GMVCDAGADRWGGRLRQIYKKIEHSEKRLSQDIEGLFNAVGRERKEGGGV
MEGGVGTRLARLEDNVEGLQGKLDQILAMLHSAVQDDDTSDEEDETSR*
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protein sequence of NO02G00340.1

>NO02G00340.1-protein ID=NO02G00340.1-protein|Name=NO02G00340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=612bp
MYACICTYSCTIEYPSLLETSAVRSFFNLQPSCAGVVDLEAEESDYRANL
GPGESKTLGSAEAFPLGFWAAHINNKTRKPSLFSKEGLRLLTSPRRWEGE
GEGGIEGGVLRGSSGMLPSPGGGEGGDGRYRRLASSKYLLHADISHVYHE
ITETSGVEVEAALVAFPAALRSGQDSFLRLCCDLYERTGKTWIFELEAPS
LILKYKWTAFGRPIYTGLLALSLLLALNYSLASALLLPLLHSNAPWRRTA
GLVWQGLLLANAFPLVCQEYWQWHAQGFRAYFFSWFRLLDLLTLLLTFAS
ILLRFFLVKGEGEKENIRTLYHMLSAIASWLLWAKLLVYLRGFKETGPLI
RMIWQIVKDTRFFLVVLAVSVMGFSNCLYLLFQEDIQREDAMGTTSPIRS
SYGSLFHTVLVLFAALNSNLDYLPFNASHFKVLVSLIYLFYCVCSTIILL
NLLIALMGDSYDKVQENALAQGRYEQAVSVLEIEDMLPQRILQDPRFFPR
WVQVLRPKPGADGGMVCDAGADRWGGRLRQIYKKIEHSEKRLSQDIEGLF
NAVGRERKEGGGVMEGGVGTRLARLEDNVEGLQGKLDQILAMLHSAVQDD
DTSDEEDETSR*
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