NO02G00250, NO02G00250 (gene) Nannochloropsis oceanica

Overview
NameNO02G00250
Unique NameNO02G00250
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3787
Alignment locationchr2:88535..92321 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:88535..92321 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0030246carbohydrate binding
GO:0003824catalytic activity
GO:0004559alpha-mannosidase activity
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0006013mannose metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR028995Glyco_hydro_57/38_cen
IPR011013Gal_mutarotase_SF_dom
IPR011682Glyco_hydro_38_C
IPR015341Glyco_hydro_38_cen
Homology
BLAST of NO02G00250 vs. NCBI_GenBank
Match: EWM30644.1 (Glycosyl hydrolase, family 13, all-beta [Nannochloropsis gaditana])

HSP 1 Score: 148.3 bits (373), Expect = 1.200e-31
Identity = 86/173 (49.71%), Postives = 105/173 (60.69%), Query Frame = 0
Query:  107 RAAEAMSALLPPSSTQAWHEDLESARRDVDLLPHHDNLPATGYNFNNVDLLLRLRRASSLLERVLSQAVSVLTAGE-DAKGPSSXXXXXXXXXXXXXXXXXXXXXXXXXXVGEPSLSHLPVLPASLHLTMDTEALRGIEDGQPPVPVWVVNSLGWARNETITLLVSRADLRVT 279
            RAAE +SALLPPS + AW +DLESARRD DL PHHDNLPATGYNFNNVDLL+RL RA +L  ++ +QA+    A E +A  PSS                                   P LP+S   T + +A R I+DGQ PV V VVN+LGW RN T+T+ VSR+DL+VT
Sbjct:   46 RAAEMVSALLPPSISGAWQKDLESARRDADLFPHHDNLPATGYNFNNVDLLVRLDRAQTLSRQIFAQALHAWLAKEQEAIDPSSPP---------------------------------PSLPSS--FTFNADAARAIDDGQAPVSVLVVNTLGWPRNATVTIRVSRSDLKVT 183          
BLAST of NO02G00250 vs. NCBI_GenBank
Match: EWM30642.1 (hypothetical protein Naga_100652g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 104.0 bits (258), Expect = 2.500e-18
Identity = 96/253 (37.94%), Postives = 115/253 (45.45%), Query Frame = 0
Query:  627 NLRGDDRSTVSLSPFFLSF-XXXXXXXXXXXXXXXXXXXXXXXXXXRRATAALQAPLLVLAPSPSWPSVGADTSDEMRRPSPFSSXXXXXXXXXXXXXXXXXXXFLEGGRSRGRGREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERVLTLQLEHLGEGREEKEE--EVVLDLGKLLRRWVREGWRVEMVEARTLTGLYAQESSQAKGRKGCVLRWEEEGEEQGAHLTLRPSGFCTIEVGMVKGEEVEE 877
            NLRGDDRSTVSL PF LSF                           RR T A+ APLL L P  +WP+      +++R   P  SXXXXXXXXXXXXXX     FL G       R G                               ER+L                  E  +D+   L RWV EGWRV  VE RTLTGLYA E  + +GR+ C +RWE +GE +G H+ +   GFCT+EVGMV   E  +
Sbjct:    1 NLRGDDRSTVSLPPFLLSFRPTCDLTSVPSENITSNLPGRAHEACLRRHTTAMTAPLLTLLPPLTWPA-----EEDLRGGIPPCSXXXXXXXXXXXXXXQPRSFFLAGKYP----RFGEGLPASVHLVSLREVGGERGGGGREREGQGEERLLXXXXXXXXXXXXXXXXGVEFDVDVEGWLARWVEEGWRVRRVEGRTLTGLYADEGLEKRGREVCRVRWEGDGEGRGLHVWIARGGFCTVEVGMVGSAEARK 244          
BLAST of NO02G00250 vs. NCBI_GenBank
Match: XP_021749564.1 (alpha-mannosidase 2-like [Chenopodium quinoa])

HSP 1 Score: 66.6 bits (161), Expect = 4.400e-7
Identity = 138/651 (21.20%), Postives = 232/651 (35.64%), Query Frame = 0
Query:    3 LLMDYINDPRVSEASRPLFQGRRPILRYATPAEFFHRLEELRE-------GGREGGQEDRLPVVSGSPFLPLVTNREDDGGDGPKGESAWSGFYSGYPEVKEAARRADALLRAAEAMSALL--------PPSSTQAWHEDLESARRDVDLLPHHDNLPATGYNFNNVDLLLRLRRASSLLERVLSQAVSVLTAGEDAKGPSSXXXXXXXXXXXXXXXXXXXXXXXXXXVGEPSLSHLPVLPASLHLTMDTEALRG---IEDGQPPVPVWVVNSLGWARNETITLLVSRADLRVTXXXXXXXXXXXXXXXXXXPIAPSVLTPLFSQATPHPFIDAAFLLS------FPLSLPPLGGLLLHLEVCGVAHWTAGRXXXXXXXXXXXXXXAVMAERIEAXXXXXXXXGRAERKMRMTNGRY-GLTFGSEMCGLASVAVKEGGKQGGAEVEEEVKVTQSFWVYDSPADSVYFFRPNGTAKPYIRPSSSSSSSCRLVGFTGPVLSQIWGEIDQGGREGGGXXXXXGGRHLRWTAQLYHTEDN-EEEEARMPFTILSLSAPGPLQDVIMRFTFPPSSSPPFLTTFDGGLLPQRRSTXXXXXXXXXXXIGAQYYPLVGRASL----GDDFHILSHAPHGVASLEEGQLEVMLHRRASYD 624
            +L DYIN       S P         ++ T  ++F  L E  E       G    G+ +  P +SG  F     +R++D          WSG+Y   P  K   R  +  LRA+E + ALL              ++   L +ARR++ L  HHD +  T  N    D   R+  +   L+  +S+A+ VL      K   +                             PS       P  +    D +A+     +++G     V + N L   RNE +  +V R D+ V                       S  T + SQ +P    D   + +      +  S+P L GL ++  V G       +                ++   +          + E ++ +   R+  LTF + +  L  VA  +G       V EE+       VY+S     Y F+P G A P+I          +LV  TGP++ +++        E            +  + ++Y+ E+  +E      + +  L      +++I+R+     +   F +  +G  + +R +            +   YYP+   A +    G  F + S    GVASL+ G LE+ML RR   D
Sbjct:  436 MLFDYIN-------SNPSLNAE---AKFGTLDDYFRTLREEAERVNYSLPGEIGSGEIEGFPSLSGDFF--TYADRQED---------YWSGYYVSRPFFKAVDRVLEHTLRASEMLMALLLGRCHRVQCEKLPASYAHKLTAARRNLALFQHHDGVTGTAKNHVVKDYGTRMHTSLQDLQIFMSKAIEVLLGIRFEKNEQN-----------------------------PSQFE----PEQVRSKYDAQAIHKGIIVQEGAAR-SVVIFNPLEQTRNEVVMAIVDRPDVSV---------------------LDSNWTCILSQVSPEMQHDKGQIFTGRHRVHWKASIPAL-GLQMYYLVHGAGQCEKAKLADLK-----------ISSSDQLPCPAPYACSKIEGEVVVIQNRHRTLTFNANLGLLIKVANSDGSLN---NVGEEIS------VYNSEGSGAYLFKPVGDAHPFIEAGG------QLVVTTGPLMQEVYSYPKTQWDEA----------PISHSTRVYNGENTIQEFVIEKEYHVEFLGDQFNDKELIVRYKTDIENRKIFFSDLNGFQMSRRET-------YDKIPVQGNYYPMPSLAFMQGLDGRRFSVHSRQSLGVASLKNGWLEIMLDRRLLND 966          
BLAST of NO02G00250 vs. NCBI_GenBank
Match: XP_024365380.1 (alpha-mannosidase At3g26720-like [Physcomitrella patens] >PNR27828.1 hypothetical protein PHYPA_029980 [Physcomitrella patens])

HSP 1 Score: 65.9 bits (159), Expect = 7.600e-7
Identity = 124/575 (21.57%), Postives = 206/575 (35.83%), Query Frame = 0
Query:   85 WSGFYSGYPEVKEAARRADALLRAAEAMSALLPPSSTQAWHEDLESARRDVDLLPHHDNLPATGYNFNNVDLLLRLRRASSLLERVLSQAVSVLTAGEDAKGPSSXXXXXXXXXXXXXXXXXXXXXXXXXXVGEPSLS----HLPVLPAS-LHLTMDTEALRGIEDGQPPVPVWVVNSLGWARNETITLLVSRADLRVTXXXXXXXXXXXXXXXXXXPIAPSVLTPLF--------SQATPHPFIDAA----FLLSFPLSLPPLGGLLLHLEVCGVAHWTAGRXXXXXXXXXXXXXXAVMAERIEAXXXXXXXXGRAERKMRMTNGRYGLTFGSEMCGLASVAVKEGGKQGGAEVEEEVKVTQSFWVYD----------SPADSVYFFRPNGTAKPYIRPSSSSSSSCRLVGFTGPVLSQIWGEIDQGGREGGGXXXXXGGRHLRWTAQLYHTEDNEEEEARMPFTILSLSAPGPLQD-----VIMRFTFPPSSSPPFLTTFDG-GLLPQRRSTXXXXXXXXXXXIGAQYYPLVGRASLGD---DFHILSHAPHGVASLEEGQLEVMLHRRASYD 624
            W+G+++  P +K   R+  ALL+AA  +  L+  +ST    + LE A   V +L HHD +  T       D   RL    S  E V ++A++ L +       S                           +G+P+ S     L ++  + L+++        ++ G+  V V   N LGW R + + + VS + + V                    + PS L P+              H  ++A+    F L F  ++PPLG     +        TA                                  R  R + + + +  L F  +   L  +  K+ G     E        QS+  Y+          + A   Y FRPN T++ +  P +SS  +  +  F GP++ ++  +                     W +Q+     N  E A + FT+     P P+ D     ++ + T P  +   F T  +G   L + R             +   YYPL     + D   D  +L     G +S+E+GQLE+MLHRR  YD
Sbjct:  365 WTGYFTSRPALKGYVRKLSALLQAARQVEFLVGKNSTGPNTDSLEEA---VAILQHHDGVSGTEQQHVANDYAARLAAGESEAEMVFNKALASLISTNATVSTS-----------LVEEVNSKPARRVVTDIGDPAPSSGSADLNLVQCNLLNVSYCPPTEVELKPGKSFVVV-TYNPLGWEREDFVRVPVSSSKIEVIDAENN--------------VIPSQLIPITDADRKLRNKYVELHAGVNASTVPKFFLVFAAAVPPLGYTSFVVRPSSSNTTTA--------------------------KMSSYETRRVGRSVYLKSSQLQLNFSKQTALLTQMKNKKTGVSTSLE--------QSYCWYNGSSGITAEDLNQASGAYLFRPN-TSECF--PFNSSHQT--MTVFRGPLVEEVHQQFSP------------------WVSQVTRVYTN-VEHAEIQFTV----GPIPIDDSNGKEIVTKITTPLKTEKSFYTDSNGRDFLKRVRDYRPDWDLEVIEPVAGNYYPLNLGIYMKDNESDVSVLVDRALGGSSIEDGQLEIMLHRRLLYD 848          
BLAST of NO02G00250 vs. NCBI_GenBank
Match: XP_024378993.1 (alpha-mannosidase At3g26720-like isoform X1 [Physcomitrella patens] >PNR52031.1 hypothetical protein PHYPA_008405 [Physcomitrella patens])

HSP 1 Score: 65.5 bits (158), Expect = 9.900e-7
Identity = 120/562 (21.35%), Postives = 196/562 (34.88%), Query Frame = 0
Query:   85 WSGFYSGYPEVKEAARRADALLRAAEAMSALLPPSSTQAWHEDLESARRDVDLLPHHDNLPATGYNFNNVDLLLRLRRASSLLERVLSQAVSVLTAGEDAKGPSSXXXXXXXXXXXXXXXXXXXXXXXXXXVGEPSLSHLPVLPASLHLTMDTEALRGIEDGQPPVPVWVVNSLGWARNETITLLVSRADLRVTXXXXXXXXXXXXXXXXXXPIAPSVLTPLFSQATPHPFIDAA----FLLSFPLSLPPLGGLLLHLEVCGVAHWTAGRXXXXXXXXXXXXXXAVMAERIEAXXXXXXXXGRAERKMRMTNGRYGLTFGSEMCGLASVAVKEGGKQGGAEVEEEVKVTQSFWVYDSP----------ADSVYFFRPNGTAKPYIRPSSSSSSSCRLVGFTGPVLSQIWGEIDQGGREGGGXXXXXGGRHLRWTAQLYHTEDNEEEEARMPFTILSLSAPGPLQD-----VIMRFTFPPSSSPPFLTTFDG-GLLPQRRSTXXXXXXXXXXXIGAQYYPLVGRASLGD---DFHILSHAPHGVASLEEGQLEVMLHRRASYD 624
            W+G+++  P +K   R+  ALL+AA  +  L+   S+    + LE A   V +L HHD +  T       D   RL +  S  E V ++A++ L + + A+                              V  P L+ +     ++     TE    ++ G+  V V   N LGW R + + + VS + + V                   PI  +  T        H  + A     + L F  ++PPLG                                   A              RA   + + + +  LTF  +   L  ++ K+ G          + V QS+  Y+            A   Y FRPN T++ +  P  +      +  F GP++ ++  +                     W +Q+     N  E+A + FT+     P P+ D     ++ +FT P  +   F T  +G   L + R             +   YYPL     + D   D  +L     G AS  +GQLE+MLHRR  YD
Sbjct:  363 WTGYFTSRPALKGYVRKLSALLQAARQVEFLVGKVSSGPNTDSLEEA---VAILQHHDGVSGTERQHVADDYAARLSKGQSESEDVFNKALASLISTKAAES----------KLLIEKMSSTPGHRVLMNPVNSPDLNLVQCNLLNVSYCPPTEV--ELKSGRSFVVV-AYNPLGWEREDFVRVPVSSSKIEV------IDAEENEIPSQLIPITEADRTLRDKYVNLHAGVSAGTAPKYFLVFAAAVPPLG-------------------------YNSFIVRPSSASGSNIAKLSSYETRRAPLTVHLKSSQLHLTFSKDTGLLTHMSNKKTG--------VSIPVEQSYCWYNGSSGVTEEDPHMASGAYLFRPN-TSECF--PLKNFQQIVTV--FRGPLVEEVHQQFSP------------------WASQVIRVYKN-AEQAEVQFTV----GPIPIDDSNGKEIVTKFTTPLRTEKTFYTDSNGRDFLKRVRDFRPDWNLEVKEPVAGNYYPLNLGIYMKDSETDVSVLVDRALGAASTADGQLEIMLHRRLLYD 841          
BLAST of NO02G00250 vs. NCBI_GenBank
Match: XP_024378997.1 (alpha-mannosidase At3g26720-like isoform X4 [Physcomitrella patens])

HSP 1 Score: 65.5 bits (158), Expect = 9.900e-7
Identity = 120/562 (21.35%), Postives = 196/562 (34.88%), Query Frame = 0
Query:   85 WSGFYSGYPEVKEAARRADALLRAAEAMSALLPPSSTQAWHEDLESARRDVDLLPHHDNLPATGYNFNNVDLLLRLRRASSLLERVLSQAVSVLTAGEDAKGPSSXXXXXXXXXXXXXXXXXXXXXXXXXXVGEPSLSHLPVLPASLHLTMDTEALRGIEDGQPPVPVWVVNSLGWARNETITLLVSRADLRVTXXXXXXXXXXXXXXXXXXPIAPSVLTPLFSQATPHPFIDAA----FLLSFPLSLPPLGGLLLHLEVCGVAHWTAGRXXXXXXXXXXXXXXAVMAERIEAXXXXXXXXGRAERKMRMTNGRYGLTFGSEMCGLASVAVKEGGKQGGAEVEEEVKVTQSFWVYDSP----------ADSVYFFRPNGTAKPYIRPSSSSSSSCRLVGFTGPVLSQIWGEIDQGGREGGGXXXXXGGRHLRWTAQLYHTEDNEEEEARMPFTILSLSAPGPLQD-----VIMRFTFPPSSSPPFLTTFDG-GLLPQRRSTXXXXXXXXXXXIGAQYYPLVGRASLGD---DFHILSHAPHGVASLEEGQLEVMLHRRASYD 624
            W+G+++  P +K   R+  ALL+AA  +  L+   S+    + LE A   V +L HHD +  T       D   RL +  S  E V ++A++ L + + A+                              V  P L+ +     ++     TE    ++ G+  V V   N LGW R + + + VS + + V                   PI  +  T        H  + A     + L F  ++PPLG                                   A              RA   + + + +  LTF  +   L  ++ K+ G          + V QS+  Y+            A   Y FRPN T++ +  P  +      +  F GP++ ++  +                     W +Q+     N  E+A + FT+     P P+ D     ++ +FT P  +   F T  +G   L + R             +   YYPL     + D   D  +L     G AS  +GQLE+MLHRR  YD
Sbjct:  363 WTGYFTSRPALKGYVRKLSALLQAARQVEFLVGKVSSGPNTDSLEEA---VAILQHHDGVSGTERQHVADDYAARLSKGQSESEDVFNKALASLISTKAAES----------KLLIEKMSSTPGHRVLMNPVNSPDLNLVQCNLLNVSYCPPTEV--ELKSGRSFVVV-AYNPLGWEREDFVRVPVSSSKIEV------IDAEENEIPSQLIPITEADRTLRDKYVNLHAGVSAGTAPKYFLVFAAAVPPLG-------------------------YNSFIVRPSSASGSNIAKLSSYETRRAPLTVHLKSSQLHLTFSKDTGLLTHMSNKKTG--------VSIPVEQSYCWYNGSSGVTEEDPHMASGAYLFRPN-TSECF--PLKNFQQIVTV--FRGPLVEEVHQQFSP------------------WASQVIRVYKN-AEQAEVQFTV----GPIPIDDSNGKEIVTKFTTPLRTEKTFYTDSNGRDFLKRVRDFRPDWNLEVKEPVAGNYYPLNLGIYMKDSETDVSVLVDRALGAASTADGQLEIMLHRRLLYD 841          
BLAST of NO02G00250 vs. NCBI_GenBank
Match: XP_024378996.1 (alpha-mannosidase At3g26720-like isoform X3 [Physcomitrella patens])

HSP 1 Score: 65.5 bits (158), Expect = 9.900e-7
Identity = 120/562 (21.35%), Postives = 196/562 (34.88%), Query Frame = 0
Query:   85 WSGFYSGYPEVKEAARRADALLRAAEAMSALLPPSSTQAWHEDLESARRDVDLLPHHDNLPATGYNFNNVDLLLRLRRASSLLERVLSQAVSVLTAGEDAKGPSSXXXXXXXXXXXXXXXXXXXXXXXXXXVGEPSLSHLPVLPASLHLTMDTEALRGIEDGQPPVPVWVVNSLGWARNETITLLVSRADLRVTXXXXXXXXXXXXXXXXXXPIAPSVLTPLFSQATPHPFIDAA----FLLSFPLSLPPLGGLLLHLEVCGVAHWTAGRXXXXXXXXXXXXXXAVMAERIEAXXXXXXXXGRAERKMRMTNGRYGLTFGSEMCGLASVAVKEGGKQGGAEVEEEVKVTQSFWVYDSP----------ADSVYFFRPNGTAKPYIRPSSSSSSSCRLVGFTGPVLSQIWGEIDQGGREGGGXXXXXGGRHLRWTAQLYHTEDNEEEEARMPFTILSLSAPGPLQD-----VIMRFTFPPSSSPPFLTTFDG-GLLPQRRSTXXXXXXXXXXXIGAQYYPLVGRASLGD---DFHILSHAPHGVASLEEGQLEVMLHRRASYD 624
            W+G+++  P +K   R+  ALL+AA  +  L+   S+    + LE A   V +L HHD +  T       D   RL +  S  E V ++A++ L + + A+                              V  P L+ +     ++     TE    ++ G+  V V   N LGW R + + + VS + + V                   PI  +  T        H  + A     + L F  ++PPLG                                   A              RA   + + + +  LTF  +   L  ++ K+ G          + V QS+  Y+            A   Y FRPN T++ +  P  +      +  F GP++ ++  +                     W +Q+     N  E+A + FT+     P P+ D     ++ +FT P  +   F T  +G   L + R             +   YYPL     + D   D  +L     G AS  +GQLE+MLHRR  YD
Sbjct:  226 WTGYFTSRPALKGYVRKLSALLQAARQVEFLVGKVSSGPNTDSLEEA---VAILQHHDGVSGTERQHVADDYAARLSKGQSESEDVFNKALASLISTKAAES----------KLLIEKMSSTPGHRVLMNPVNSPDLNLVQCNLLNVSYCPPTEV--ELKSGRSFVVV-AYNPLGWEREDFVRVPVSSSKIEV------IDAEENEIPSQLIPITEADRTLRDKYVNLHAGVSAGTAPKYFLVFAAAVPPLG-------------------------YNSFIVRPSSASGSNIAKLSSYETRRAPLTVHLKSSQLHLTFSKDTGLLTHMSNKKTG--------VSIPVEQSYCWYNGSSGVTEEDPHMASGAYLFRPN-TSECF--PLKNFQQIVTV--FRGPLVEEVHQQFSP------------------WASQVIRVYKN-AEQAEVQFTV----GPIPIDDSNGKEIVTKFTTPLRTEKTFYTDSNGRDFLKRVRDFRPDWNLEVKEPVAGNYYPLNLGIYMKDSETDVSVLVDRALGAASTADGQLEIMLHRRLLYD 704          
BLAST of NO02G00250 vs. NCBI_GenBank
Match: XP_024378994.1 (alpha-mannosidase At3g26720-like isoform X2 [Physcomitrella patens])

HSP 1 Score: 65.5 bits (158), Expect = 9.900e-7
Identity = 120/562 (21.35%), Postives = 196/562 (34.88%), Query Frame = 0
Query:   85 WSGFYSGYPEVKEAARRADALLRAAEAMSALLPPSSTQAWHEDLESARRDVDLLPHHDNLPATGYNFNNVDLLLRLRRASSLLERVLSQAVSVLTAGEDAKGPSSXXXXXXXXXXXXXXXXXXXXXXXXXXVGEPSLSHLPVLPASLHLTMDTEALRGIEDGQPPVPVWVVNSLGWARNETITLLVSRADLRVTXXXXXXXXXXXXXXXXXXPIAPSVLTPLFSQATPHPFIDAA----FLLSFPLSLPPLGGLLLHLEVCGVAHWTAGRXXXXXXXXXXXXXXAVMAERIEAXXXXXXXXGRAERKMRMTNGRYGLTFGSEMCGLASVAVKEGGKQGGAEVEEEVKVTQSFWVYDSP----------ADSVYFFRPNGTAKPYIRPSSSSSSSCRLVGFTGPVLSQIWGEIDQGGREGGGXXXXXGGRHLRWTAQLYHTEDNEEEEARMPFTILSLSAPGPLQD-----VIMRFTFPPSSSPPFLTTFDG-GLLPQRRSTXXXXXXXXXXXIGAQYYPLVGRASLGD---DFHILSHAPHGVASLEEGQLEVMLHRRASYD 624
            W+G+++  P +K   R+  ALL+AA  +  L+   S+    + LE A   V +L HHD +  T       D   RL +  S  E V ++A++ L + + A+                              V  P L+ +     ++     TE    ++ G+  V V   N LGW R + + + VS + + V                   PI  +  T        H  + A     + L F  ++PPLG                                   A              RA   + + + +  LTF  +   L  ++ K+ G          + V QS+  Y+            A   Y FRPN T++ +  P  +      +  F GP++ ++  +                     W +Q+     N  E+A + FT+     P P+ D     ++ +FT P  +   F T  +G   L + R             +   YYPL     + D   D  +L     G AS  +GQLE+MLHRR  YD
Sbjct:  363 WTGYFTSRPALKGYVRKLSALLQAARQVEFLVGKVSSGPNTDSLEEA---VAILQHHDGVSGTERQHVADDYAARLSKGQSESEDVFNKALASLISTKAAES----------KLLIEKMSSTPGHRVLMNPVNSPDLNLVQCNLLNVSYCPPTEV--ELKSGRSFVVV-AYNPLGWEREDFVRVPVSSSKIEV------IDAEENEIPSQLIPITEADRTLRDKYVNLHAGVSAGTAPKYFLVFAAAVPPLG-------------------------YNSFIVRPSSASGSNIAKLSSYETRRAPLTVHLKSSQLHLTFSKDTGLLTHMSNKKTG--------VSIPVEQSYCWYNGSSGVTEEDPHMASGAYLFRPN-TSECF--PLKNFQQIVTV--FRGPLVEEVHQQFSP------------------WASQVIRVYKN-AEQAEVQFTV----GPIPIDDSNGKEIVTKFTTPLRTEKTFYTDSNGRDFLKRVRDFRPDWNLEVKEPVAGNYYPLNLGIYMKDSETDVSVLVDRALGAASTADGQLEIMLHRRLLYD 841          
BLAST of NO02G00250 vs. NCBI_GenBank
Match: XP_024378998.1 (probable alpha-mannosidase At5g13980 isoform X5 [Physcomitrella patens])

HSP 1 Score: 65.5 bits (158), Expect = 9.900e-7
Identity = 120/562 (21.35%), Postives = 196/562 (34.88%), Query Frame = 0
Query:   85 WSGFYSGYPEVKEAARRADALLRAAEAMSALLPPSSTQAWHEDLESARRDVDLLPHHDNLPATGYNFNNVDLLLRLRRASSLLERVLSQAVSVLTAGEDAKGPSSXXXXXXXXXXXXXXXXXXXXXXXXXXVGEPSLSHLPVLPASLHLTMDTEALRGIEDGQPPVPVWVVNSLGWARNETITLLVSRADLRVTXXXXXXXXXXXXXXXXXXPIAPSVLTPLFSQATPHPFIDAA----FLLSFPLSLPPLGGLLLHLEVCGVAHWTAGRXXXXXXXXXXXXXXAVMAERIEAXXXXXXXXGRAERKMRMTNGRYGLTFGSEMCGLASVAVKEGGKQGGAEVEEEVKVTQSFWVYDSP----------ADSVYFFRPNGTAKPYIRPSSSSSSSCRLVGFTGPVLSQIWGEIDQGGREGGGXXXXXGGRHLRWTAQLYHTEDNEEEEARMPFTILSLSAPGPLQD-----VIMRFTFPPSSSPPFLTTFDG-GLLPQRRSTXXXXXXXXXXXIGAQYYPLVGRASLGD---DFHILSHAPHGVASLEEGQLEVMLHRRASYD 624
            W+G+++  P +K   R+  ALL+AA  +  L+   S+    + LE A   V +L HHD +  T       D   RL +  S  E V ++A++ L + + A+                              V  P L+ +     ++     TE    ++ G+  V V   N LGW R + + + VS + + V                   PI  +  T        H  + A     + L F  ++PPLG                                   A              RA   + + + +  LTF  +   L  ++ K+ G          + V QS+  Y+            A   Y FRPN T++ +  P  +      +  F GP++ ++  +                     W +Q+     N  E+A + FT+     P P+ D     ++ +FT P  +   F T  +G   L + R             +   YYPL     + D   D  +L     G AS  +GQLE+MLHRR  YD
Sbjct:  122 WTGYFTSRPALKGYVRKLSALLQAARQVEFLVGKVSSGPNTDSLEEA---VAILQHHDGVSGTERQHVADDYAARLSKGQSESEDVFNKALASLISTKAAES----------KLLIEKMSSTPGHRVLMNPVNSPDLNLVQCNLLNVSYCPPTEV--ELKSGRSFVVV-AYNPLGWEREDFVRVPVSSSKIEV------IDAEENEIPSQLIPITEADRTLRDKYVNLHAGVSAGTAPKYFLVFAAAVPPLG-------------------------YNSFIVRPSSASGSNIAKLSSYETRRAPLTVHLKSSQLHLTFSKDTGLLTHMSNKKTG--------VSIPVEQSYCWYNGSSGVTEEDPHMASGAYLFRPN-TSECF--PLKNFQQIVTV--FRGPLVEEVHQQFSP------------------WASQVIRVYKN-AEQAEVQFTV----GPIPIDDSNGKEIVTKFTTPLRTEKTFYTDSNGRDFLKRVRDFRPDWNLEVKEPVAGNYYPLNLGIYMKDSETDVSVLVDRALGAASTADGQLEIMLHRRLLYD 600          
The following BLAST results are available for this feature:
BLAST of NO02G00250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 9
Match NameE-valueIdentityDescription
EWM30644.11.200e-3149.71Glycosyl hydrolase, family 13, all-beta [Nannochlo... [more]
EWM30642.12.500e-1837.94hypothetical protein Naga_100652g1, partial [Nanno... [more]
XP_021749564.14.400e-721.20alpha-mannosidase 2-like [Chenopodium quinoa][more]
XP_024365380.17.600e-721.57alpha-mannosidase At3g26720-like [Physcomitrella p... [more]
XP_024378993.19.900e-721.35alpha-mannosidase At3g26720-like isoform X1 [Physc... [more]
XP_024378997.19.900e-721.35alpha-mannosidase At3g26720-like isoform X4 [Physc... [more]
XP_024378996.19.900e-721.35alpha-mannosidase At3g26720-like isoform X3 [Physc... [more]
XP_024378994.19.900e-721.35alpha-mannosidase At3g26720-like isoform X2 [Physc... [more]
XP_024378998.19.900e-721.35probable alpha-mannosidase At5g13980 isoform X5 [P... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR068ncniR068Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G00250.1NO02G00250.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|322159gene_10183Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101467g1gene27Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G00250.1NO02G00250.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G00250 ID=NO02G00250|Name=NO02G00250|organism=Nannochloropsis oceanica|type=gene|length=3787bp
ATGTCCTTGCTCATGGACTATATCAATGACCCCCGGgtacgcaagccctc
cctccatccctccctccatcctatccttcctccctccacacctatcgagg
tacttgatcttcttctcccccctccttccctccctccttccctccctccc
tccctctctccctccctctcctcctagGTCAGCGAGGCCTCCCGCCCCCT
CTTCCAAGGCCGTCGGCCCATACTCCGCTACGCCACGCCCGCAGAATTCT
TCCACCGGCTGGAGGAACTGAGGGAGGGCGGGAGGGAGGGCGGGCAAGAG
GACAGGTTGCCGGTCGTCAGgtgcgtggaaaggacggcacattgggagca
acacatggtattcaccctccctccttccctccctccctccctccctccct
ccctccctccctccctccctctctgcagTGGCTCCCCCTTCCTCCCTCTG
GTGACCAACCGGGAGGACGATGGGGGGGATGGGCCCAAGGGGGAGAGTGC
CTGGTCGGGCTTCTATTCAGGCTACCCGGAGGTAAAGGAGGCGGCCAGGC
GGGCCGATGCGCTCTTGAGgtagggagggaggtggggaggaggggaggga
gagagggagggacatgaagaaagaggcgctcacgaacctttggttattga
tgataaaaacacacaattttaacatttacattaatgttttactcttacgt
tggcattaacattaacataaacattaacaacaataacagGGCGGCCGAGG
CCATGTCTGCTCTTCTTCCGCCGTCCAGCACTCAGGCATGGCATGAGGAC
CTAGAGAGCGCACGgtgagcggttcaatcatttccttcccctccctcctc
ctcaatctcccccccttctttctcgtcctcctccttctcctcctcgccct
cttcctcctcctcctcctccttcttcttcttctccttcttctcctcctcc
ttcttcttcttcttctcatttatcctctcttttccctccctctccccccc
tttctccctcagGCGTGATGTGGACCTCCTCCCCCACCACGACAACCTCC
CCGCCACTGGATACAACTTCAACAATGTCGACCTCCTCCTCCGCCTCCGA
CGCGCCTCCTCCCTCTTGGAGAGAGTGCTCTCACAAGCCGTATCAGTACT
AACAGCAGGGGAAGACGCAAAGGGCCCCTCGTCCTCCCTCCCTCCCTCCC
TCCCTCCCTCCGTCCCTCCTCCCCCGACAGCAACAACCGCAGCCGCAGCC
ACAACAGCAGCGGTGGGAGAGCCATCGCTCTCCCACCTTCCCGTCCTCCC
CGCCTCCCTCCACCTGACCATGGATACAGAGGCCTTGAGAGGGATCGAGG
ACGGGCAGCCTCCGGTGCCCGTATGGGTCGTCAACAGCTTGGGTTGGGCG
AGgtgaggaggagggagggagggagggagggggggctacgtgtcttttga
atgtcgcatctgacgccacctcaccttcttcgctggggtccacatttaca
tcatttttgccgacagAAACGAAACGATCACTCTCCTCGTCTCTCGGGCC
GACCTTCGGGTTACCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGCTCTTCCCTCCCCATCGCACCCTCCGTCCTCACCCCACTTT
TCTCACAAGCGACGCCCCATCCGTTTATCGACGCCGCCTTCCTCCTCTCC
TTCCCCCTCTCCCTTCCTCCCTTGGGCGGCCTCCTGCTTCATTTAGAAGT
CTGTGGGGTGGCTCATTGGACGGCAGGGAGGGAGGGAGGGAGGGAGGGAG
GGAGGGAGGCAGGAGAGGGATGCGCGGTGATGGCGGAGAGGATCGAGGCA
GAGGAGGAGGGGGAGGGGGAGGGAGGGAGGGCGGAAAGGAAGATGAGAAT
GACGAATGGCCGGTATGGCCTGACCTTCGGGTCTGAGATGTGCGGGCTGG
CAAGCGTGGCTGTGAAGGAGGGAGGGAAGCAGGGAGGGGCAGAGGTGGAG
GAGGAGGTGAAGGTGACGCAGTCGTTTTGGGTTTACGATTCGCCGGCAGA
TTCGGTGTATTTCTTCAGgttgggagggagggagggagggagggagggag
ggagggagggagggagggagcgggggagcgggggagcgggggaggcaggc
attaggcgatggaaggaaggaatgtcttcatcctttcttccaactccctc
cgtctgtcctccctccctccctccctccctccctcccttgacagGCCTAA
CGGAACAGCCAAACCCTACATCCGCCCCTCCTCCTCCTCCTCCTCCTCCT
GCCGCCTCGTGGGATTCACAGGCCCCGTGCTCTCTCAAATCTGGGGAGAG
ATCGACCAGGGAGGGAGGGAGGGCGGGGGGGAAGGCGAGAGGGAGGGCGG
GCGGCACCTGCGGTGGACAGCACAGCTTTACCATACGGAAGACAATGAGG
AGGAGGAGGCCCGCATGCCCTTCACCATCCTCTCTCTCTCCGCACCAGGG
CCTTTGCAAGACGTCATCATGCGCTTTACCTTCCCCCCTTCCTCCTCGCC
GCCCTTCCTCACCACCTTCGATGGCGGGCTCCTCCCACAGCGGCGGAGCA
CCCTCTCCTTCCCCCCTTCCTCCCCCCCTCCCTCGATCGGCGCGCAGTAC
TACCCGCTGGTGGGCCGGGCCTCCCTTGGAGACGATTTCCACATCCTCTC
ACACGCTCCTCATGGCGTGGCGTCGCTAGAGGAGGGGCAGCTTGAGGTCA
TGCTGCATCGGCGGGCATCGgtgggtgaagcaggaaggaagagaggaagg
gaggagggaaggatggagtccgagttgtagaggtccgtcgttgatcagca
tctcatcttgatcattccttgctccctcactccttccctaacagTACGAC
TCGGTCTACAATCTCCGAGGGGACGACCGAAGCACCGTCTCCCTTTCCCC
CTTCTTCCTCTCCTTTCTCAGCAGCAGCAGCAGCAGTACTAGTAGTCAGA
GTATTAGCAGCGGTAGCATCAACAACAACCATGAGCAGACACTGCGTCGT
GCCACTGCGGCCCTGCAAGCCCCTCTCCTAGTGCTAGCGCCCTCACCCTC
CTGGCCCTCGGTGGGTGCCGACACCAGTGATGAAATGAGACGTCCCTCCC
CCTTCTCCTCTTCTTCCTCCTCCTCTTTTCCCTCTTCTTTGTCCATCTCT
TCCCTTTCCTCCTTTTCGTTCTTGGAAGGGGGACGAAGTAGAGGGAGAGG
GAGGGAGGGAGGGCTGCCGGCGTCGGTGCACCTGCTGGGGTTGAGTGAAA
CCGCTTTCGTGAGAGGAGGGAGTGAGAGGGGGAAGGGGGACGGAGGGGGG
GAGGAGAGAGTCTTGACACTGCAGCTCGAGCATCTTGGCGAGGGAAGGGA
GGAGAAGGAGGAGGAAGTGGTCCTGGACCTCGGAAAGCTATTGAGGCGGT
GGGTGAGGGAGGGGTGGAGGGTGGAGATGGTGGAGGCACGGACGTTGACT
GGGTTGTATGCCCAAGAGAGTTCGCAGGCCAAGGGGAGGAAAGGGTGTGT
GTTGCGGTGGGAGGAGGAGGGAGAAGAACAAGGGGCACATCTGACATTGC
GGCCTTCTGGGTTTTGCACGATTGAAGTTGGGATGGTGAAGGGGGAGGAA
GTGGAGGAAGTGAAGGGAGAGGACGAGGAAGAGGAGGGTGTGGCGGTCGC
GGCAGTCGCGAGGAAAGAGGCAGGAAAAGGTGGTTGAGATAGGTAGTTCA
TGTAAAGCAATTGTGGGAGTTGTTCCAATCGATTAAA
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protein sequence of NO02G00250.1

>NO02G00250.1-protein ID=NO02G00250.1-protein|Name=NO02G00250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=902bp
MSLLMDYINDPRVSEASRPLFQGRRPILRYATPAEFFHRLEELREGGREG
GQEDRLPVVSGSPFLPLVTNREDDGGDGPKGESAWSGFYSGYPEVKEAAR
RADALLRAAEAMSALLPPSSTQAWHEDLESARRDVDLLPHHDNLPATGYN
FNNVDLLLRLRRASSLLERVLSQAVSVLTAGEDAKGPSSSLPPSLPPSVP
PPPTATTAAAATTAAVGEPSLSHLPVLPASLHLTMDTEALRGIEDGQPPV
PVWVVNSLGWARNETITLLVSRADLRVTSSSSSSSSSSSSSSSSSLPIAP
SVLTPLFSQATPHPFIDAAFLLSFPLSLPPLGGLLLHLEVCGVAHWTAGR
EGGREGGREAGEGCAVMAERIEAEEEGEGEGGRAERKMRMTNGRYGLTFG
SEMCGLASVAVKEGGKQGGAEVEEEVKVTQSFWVYDSPADSVYFFRPNGT
AKPYIRPSSSSSSSCRLVGFTGPVLSQIWGEIDQGGREGGGEGEREGGRH
LRWTAQLYHTEDNEEEEARMPFTILSLSAPGPLQDVIMRFTFPPSSSPPF
LTTFDGGLLPQRRSTLSFPPSSPPPSIGAQYYPLVGRASLGDDFHILSHA
PHGVASLEEGQLEVMLHRRASYDSVYNLRGDDRSTVSLSPFFLSFLSSSS
SSTSSQSISSGSINNNHEQTLRRATAALQAPLLVLAPSPSWPSVGADTSD
EMRRPSPFSSSSSSSFPSSLSISSLSSFSFLEGGRSRGRGREGGLPASVH
LLGLSETAFVRGGSERGKGDGGGEERVLTLQLEHLGEGREEKEEEVVLDL
GKLLRRWVREGWRVEMVEARTLTGLYAQESSQAKGRKGCVLRWEEEGEEQ
GAHLTLRPSGFCTIEVGMVKGEEVEEVKGEDEEEEGVAVAAVARKEAGKG
G*
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Synonyms
Publications